pycom07g17220

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
19755323 .. 19757274
1952 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g17220.2

Sequence Viewer

Length: 468 bp
ATGCTGGGCAGAGCACACAGCTTCTTCTTCCCCAACTCACAACAACCCAAAGCCACAACCAGCTTCGAGAAGCCTCTGAATGAAAGACAAACCCCAAATTCTCAGCTCAGTCACGACACATTCAACGATATGGCTACACCATTGTTGGCTGGTCTTGCAGTAGCTGCTACTGCCCTTGCTGGTAGATATGGTATCCAGGCTTGGCATGCGTTCAAGACACGACCACCAAAAGCTAGAATGCGGAAATTTTATGAAGGTGGCTTCCAGCCGACAATGACAAAGAGGGAAGCAGCTCTTATTCTTGGTATCAGGGAAAGTGCAGCTGCAGACAAGGTCAAGGAAGCACATAGAAAGGTCATGGTCGCAAACCATCCTGATGCTGGTGGCAGTCATTACCTTGCTTCCAAAATCAATGAAGCCAAAGATGTGATGCTCGGGAAGACAAAGGGCAGCGGATCAGCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

156

Amino Acids

16.9

Weight (kDa)

10.1

Isoelectric Point (pI)

23.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015864)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G35795
fragaria_vesca FvH4_7g20090
malus_domestica MD01G1130500.v1.1 MD07G1178600.v1.1
prunus_persica Prupe.2G217700_v2.0.a1
pyrus_communis pycom01g13930 pycom07g17220
rosa_chinensis RchiOBHm_Chr1g0364051
rosa_multiflora Rmu_sc0009677.1_g000021
rosa_roxburghii Rroxscaffold_4G00292700
rosa_rugosa Rorug01G0313100
rosa_samantha Rh1AG320500 Rh1BG283700 Rh1CG300100
rosa_wichuraiana Rw1G028410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 241, 453
AclWI GGATC 1 cut(s) 463
AcsI RAATTY 2 cut(s) 97, 245
AfiI CCNNNNNNNGG 1 cut(s) 380
AgsI TTSAA 2 cut(s) 124, 214
AjnI CCWGG 1 cut(s) 195
AluBI AGCT 7 cut(s) 21, 63, 106, 164, 233, 293, 323
AluI AGCT 7 cut(s) 21, 63, 106, 164, 233, 293, 323
Alw21I GWGCWC 1 cut(s) 16
AlwI GGATC 1 cut(s) 463
AlwNI CAGNNNCTG 1 cut(s) 164
Ama87I CYCGRG 1 cut(s) 434
ApeKI GCWGC 5 cut(s) 164, 290, 320, 323, 450
ApoI RAATTY 2 cut(s) 97, 245
AvaI CYCGRG 1 cut(s) 434
BbsI GAAGAC 1 cut(s) 446
Bbv12I GWGCWC 1 cut(s) 16
BbvI GCAGC 5 cut(s) 151, 302, 310, 332, 462
BccI CCATC 1 cut(s) 378
BciT130I CCWGG 1 cut(s) 197
BciVI GTATCC 1 cut(s) 203
BfaI CTAG 1 cut(s) 234
BfmI CTRYAG 1 cut(s) 324
BfuI GTATCC 1 cut(s) 203
BisI GCNGC 5 cut(s) 165, 291, 321, 324, 451
BlsI GCNGC 5 cut(s) 166, 292, 322, 325, 452
Bme1390I CCNGG 1 cut(s) 197
BmeT110I CYCGRG 1 cut(s) 434
BmrFI CCNGG 1 cut(s) 197
BmsI GCATC 2 cut(s) 367, 420
BpiI GAAGAC 1 cut(s) 446
Bsc4I CCNNNNNNNGG 1 cut(s) 380
BseBI CCWGG 1 cut(s) 197
BseGI GGATG 1 cut(s) 370
BseLI CCNNNNNNNGG 1 cut(s) 380
BseMII CTCAG 2 cut(s) 116, 121
BseXI GCAGC 5 cut(s) 151, 302, 310, 332, 462
BseYI CCCAGC 1 cut(s) 4
BsgI GTGCAG 1 cut(s) 339
BsiHKAI GWGCWC 1 cut(s) 16
BsiHKCI CYCGRG 1 cut(s) 434
BslI CCNNNNNNNGG 1 cut(s) 380
BsmI GAATGC 1 cut(s) 243
BsoBI CYCGRG 1 cut(s) 434
Bsp1286I GDGCHC 1 cut(s) 16
Bsp143I GATC 1 cut(s) 455
BspACI CCGC 2 cut(s) 241, 453
BspCNI CTCAG 2 cut(s) 115, 120
BspMAI CTGCAG 1 cut(s) 328
BspPI GGATC 1 cut(s) 463
BssMI GATC 1 cut(s) 455
Bst2UI CCWGG 1 cut(s) 197
BstAPI GCANNNNNTGC 1 cut(s) 164
BstC8I GCNNGC 1 cut(s) 207
BstDEI CTNAG 2 cut(s) 102, 107
BstF5I GGATG 1 cut(s) 370
BstKTI GATC 1 cut(s) 458
BstMBI GATC 1 cut(s) 455
BstMWI GCNNNNNNNGC 4 cut(s) 155, 164, 170, 206
BstNI CCWGG 1 cut(s) 197
BstNSI RCATGY 1 cut(s) 209
BstSCI CCNGG 1 cut(s) 195
BstSFI CTRYAG 1 cut(s) 324
BstV1I GCAGC 5 cut(s) 151, 302, 310, 332, 462
BstV2I GAAGAC 1 cut(s) 446
BsuI GTATCC 1 cut(s) 203
BtsCI GGATG 1 cut(s) 370
Cac8I GCNNGC 1 cut(s) 207
CaiI CAGNNNCTG 1 cut(s) 164
CviAII CATG 2 cut(s) 206, 358
DdeI CTNAG 2 cut(s) 102, 107
DpnI GATC 1 cut(s) 457
DpnII GATC 1 cut(s) 455
Eco88I CYCGRG 1 cut(s) 434
EcoRII CCWGG 1 cut(s) 195
FaeI CATG 2 cut(s) 209, 361
FaiI YATR 6 cut(s) 131, 189, 207, 252, 348, 359
FalI AAGNNNNNCTT 2 cut(s) 279, 311
FatI CATG 2 cut(s) 205, 357
Fnu4HI GCNGC 5 cut(s) 165, 291, 321, 324, 451
FokI GGATG 1 cut(s) 357
Fsp4HI GCNGC 5 cut(s) 165, 291, 321, 324, 451
FspBI CTAG 1 cut(s) 234
GluI GCNGC 5 cut(s) 165, 291, 321, 324, 451
GsaI CCCAGC 1 cut(s) 8
Hin1II CATG 2 cut(s) 209, 361
Hpy188I TCNGA 1 cut(s) 78
Hpy188III TCNNGA 5 cut(s) 67, 113, 214, 374, 436
HpyAV CCTTC 1 cut(s) 248
HpyCH4V TGCA 3 cut(s) 158, 320, 326
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 164, 170, 206
HpyF3I CTNAG 2 cut(s) 102, 107
Hsp92II CATG 2 cut(s) 209, 361
Kzo9I GATC 1 cut(s) 455
LpnPI CCDG 9 cut(s) 73, 135, 165, 182, 209, 278, 295, 366, 387
Lsp1109I GCAGC 5 cut(s) 151, 302, 310, 332, 462
LweI GCATC 2 cut(s) 367, 420
MaeI CTAG 1 cut(s) 234
MaeIII GTNAC 1 cut(s) 110
MalI GATC 1 cut(s) 457
MboI GATC 1 cut(s) 455
MboII GAAGA 3 cut(s) 16, 19, 451
MhlI GDGCHC 1 cut(s) 16
MluCI AATT 2 cut(s) 97, 245
MnlI CCTC 2 cut(s) 84, 276
MslI CAYNNNNRTG 1 cut(s) 375
MspA1I CMGCKG 2 cut(s) 323, 453
MspR9I CCNGG 1 cut(s) 197
Mva1269I GAATGC 1 cut(s) 243
MvaI CCWGG 1 cut(s) 197
MwoI GCNNNNNNNGC 4 cut(s) 155, 164, 170, 206
NdeII GATC 1 cut(s) 455
NlaIII CATG 2 cut(s) 209, 361
NmuCI GTSAC 1 cut(s) 110
NspI RCATGY 1 cut(s) 209
PaeI GCATGC 1 cut(s) 209
PctI GAATGC 1 cut(s) 243
PflFI GACNNNGTC 1 cut(s) 332
PkrI GCNGC 5 cut(s) 166, 292, 322, 325, 452
Psp6I CCWGG 1 cut(s) 195
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 1 cut(s) 195
PstI CTGCAG 1 cut(s) 328
PstNI CAGNNNCTG 1 cut(s) 164
PsyI GACNNNGTC 1 cut(s) 332
PvuII CAGCTG 1 cut(s) 323
RseI CAYNNNNRTG 1 cut(s) 375
SatI GCNGC 5 cut(s) 165, 291, 321, 324, 451
Sau3AI GATC 1 cut(s) 455
ScrFI CCNGG 1 cut(s) 197
SduI GDGCHC 1 cut(s) 16
SfaNI GCATC 2 cut(s) 367, 420
SfcI CTRYAG 1 cut(s) 324
SmiMI CAYNNNNRTG 1 cut(s) 375
SphI GCATGC 1 cut(s) 209
Sse9I AATT 2 cut(s) 97, 245
SsiI CCGC 2 cut(s) 241, 453
SspMI CTAG 1 cut(s) 234
StyD4I CCNGG 1 cut(s) 195
TaqI TCGA 1 cut(s) 66
TasI AATT 2 cut(s) 97, 245
TseFI GTSAC 1 cut(s) 110
TseI GCWGC 5 cut(s) 164, 290, 320, 323, 450
Tsp45I GTSAC 1 cut(s) 110
TspDTI ATGAA 3 cut(s) 96, 267, 429
Tth111I GACNNNGTC 1 cut(s) 332
XapI RAATTY 2 cut(s) 97, 245
XceI RCATGY 1 cut(s) 209
XcmI CCANNNNNNNNNTGG 1 cut(s) 377
XspI CTAG 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.