Prupe.2G217700_v2.0.a1

Mitochondrial import inner membrane translocase subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0015864
Physical Location & Seq
Forward (+)
24754969 .. 24756941
1973 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G217700.1

Sequence Viewer

Length: 453 bp
ATGTTGGGCAAAGCACAAGGCCTCTTCCCCAACTCAGAAGCTAAAGGCAAAAGCTCCGAGAAAGCTCTGAATGAAACCCCGAATTCTGAGCTCAGGCACGATACTTTCGACGCAATGGCTACACCTTTTCTGGCTGGTCTTGCAGTAGCTGCTACTGCGCTTGCTGGTAGATATGGCATCCAGGCTTGGCATGCTTTCAAGACACGACCGCCAAAACCTAGAATGCGGAAATTTTATGAAGGTGGTTTCCAGCAGACAATGACAAAGAGGGAAGCAGCTCTTATTCTGGGTATCAGGGAGAATGCACCTGCAGACAAGGTCAAGGAAGCACATAGAAAGGTGATGGTTGCAAACCATCCTGATGCAGGCGGTAGCCATTACCTAGCATCCAAAATCAATGAAGCTAAAGATGTGATGCTTGGAAAGACAAAGGGCAGTGGATCAGCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

151

Amino Acids

16.21

Weight (kDa)

9.9

Isoelectric Point (pI)

27.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015864)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G35795
fragaria_vesca FvH4_7g20090
malus_domestica MD01G1130500.v1.1 MD07G1178600.v1.1
prunus_persica Prupe.2G217700_v2.0.a1
pyrus_communis pycom01g13930 pycom07g17220
rosa_chinensis RchiOBHm_Chr1g0364051
rosa_multiflora Rmu_sc0009677.1_g000021
rosa_roxburghii Rroxscaffold_4G00292700
rosa_rugosa Rorug01G0313100
rosa_samantha Rh1AG320500 Rh1BG283700 Rh1CG300100
rosa_wichuraiana Rw1G028410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 316
Acc36I ACCTGC 1 cut(s) 316
AciI CCGC 3 cut(s) 209, 226, 369
AclWI GGATC 1 cut(s) 448
AcsI RAATTY 2 cut(s) 82, 230
AfiI CCNNNNNNNGG 1 cut(s) 365
AgsI TTSAA 1 cut(s) 199
AjnI CCWGG 1 cut(s) 180
AluBI AGCT 7 cut(s) 41, 54, 65, 91, 149, 278, 404
AluI AGCT 7 cut(s) 41, 54, 65, 91, 149, 278, 404
Alw21I GWGCWC 1 cut(s) 93
AlwI GGATC 1 cut(s) 448
AlwNI CAGNNNCTG 1 cut(s) 149
AoxI GGCC 1 cut(s) 19
ApeKI GCWGC 2 cut(s) 149, 275
ApoI RAATTY 2 cut(s) 82, 230
AspLEI GCGC 1 cut(s) 160
AsuHPI GGTGA 1 cut(s) 352
BanII GRGCYC 1 cut(s) 93
Bbv12I GWGCWC 1 cut(s) 93
BbvI GCAGC 2 cut(s) 136, 287
BccI CCATC 2 cut(s) 337, 363
BciT130I CCWGG 1 cut(s) 182
BfaI CTAG 2 cut(s) 219, 383
BfmI CTRYAG 1 cut(s) 309
BfuAI ACCTGC 1 cut(s) 316
BisI GCNGC 2 cut(s) 150, 276
BlsI GCNGC 2 cut(s) 151, 277
Bme1390I CCNGG 1 cut(s) 182
BmrFI CCNGG 1 cut(s) 182
BmsI GCATC 4 cut(s) 186, 352, 395, 405
Bpu10I CCTNAGC 1 cut(s) 92
Bsc4I CCNNNNNNNGG 1 cut(s) 365
Bse3DI GCAATG 1 cut(s) 120
BseBI CCWGG 1 cut(s) 182
BseGI GGATG 3 cut(s) 177, 355, 386
BseLI CCNNNNNNNGG 1 cut(s) 365
BseMI GCAATG 1 cut(s) 120
BseMII CTCAG 3 cut(s) 48, 78, 106
BseXI GCAGC 2 cut(s) 136, 287
Bsh1285I CGRYCG 1 cut(s) 209
BshFI GGCC 1 cut(s) 21
BsiEI CGRYCG 1 cut(s) 209
BsiHKAI GWGCWC 1 cut(s) 93
BslI CCNNNNNNNGG 1 cut(s) 365
BsmI GAATGC 2 cut(s) 228, 307
BsnI GGCC 1 cut(s) 21
Bsp1286I GDGCHC 1 cut(s) 93
Bsp143I GATC 1 cut(s) 440
BspACI CCGC 3 cut(s) 209, 226, 369
BspANI GGCC 1 cut(s) 21
BspCNI CTCAG 3 cut(s) 47, 79, 105
BspMAI CTGCAG 1 cut(s) 313
BspMI ACCTGC 1 cut(s) 316
BspPI GGATC 1 cut(s) 448
BsrDI GCAATG 1 cut(s) 120
BssMI GATC 1 cut(s) 440
Bst2UI CCWGG 1 cut(s) 182
Bst6I CTCTTC 1 cut(s) 29
BstAPI GCANNNNNTGC 1 cut(s) 149
BstC8I GCNNGC 3 cut(s) 162, 192, 367
BstDEI CTNAG 3 cut(s) 34, 87, 92
BstENI CCTNNNNNAGG 1 cut(s) 363
BstF5I GGATG 3 cut(s) 177, 355, 386
BstHHI GCGC 1 cut(s) 160
BstKTI GATC 1 cut(s) 443
BstMBI GATC 1 cut(s) 440
BstMCI CGRYCG 1 cut(s) 209
BstMWI GCNNNNNNNGC 4 cut(s) 140, 149, 155, 191
BstNI CCWGG 1 cut(s) 182
BstNSI RCATGY 1 cut(s) 194
BstSCI CCNGG 1 cut(s) 180
BstSFI CTRYAG 1 cut(s) 309
BstV1I GCAGC 2 cut(s) 136, 287
BsuRI GGCC 1 cut(s) 21
BtsCI GGATG 3 cut(s) 177, 355, 386
BtsI GCAGTG 1 cut(s) 442
BtsIMutI CAGTG 1 cut(s) 442
BveI ACCTGC 1 cut(s) 316
Cac8I GCNNGC 3 cut(s) 162, 192, 367
CaiI CAGNNNCTG 1 cut(s) 149
CfoI GCGC 1 cut(s) 160
CseI GACGC 1 cut(s) 119
CviAII CATG 1 cut(s) 191
DdeI CTNAG 3 cut(s) 34, 87, 92
DpnI GATC 1 cut(s) 442
DpnII GATC 1 cut(s) 440
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Ecl136II GAGCTC 1 cut(s) 91
Eco147I AGGCCT 1 cut(s) 21
Eco24I GRGCYC 1 cut(s) 93
Eco53kI GAGCTC 1 cut(s) 91
EcoICRI GAGCTC 1 cut(s) 91
EcoNI CCTNNNNNAGG 1 cut(s) 363
EcoRI GAATTC 1 cut(s) 82
EcoRII CCWGG 1 cut(s) 180
EcoT38I GRGCYC 1 cut(s) 93
FaeI CATG 1 cut(s) 194
FaiI YATR 4 cut(s) 174, 192, 237, 333
FalI AAGNNNNNCTT 2 cut(s) 264, 296
FatI CATG 1 cut(s) 190
Fnu4HI GCNGC 2 cut(s) 150, 276
FokI GGATG 3 cut(s) 164, 342, 373
FriOI GRGCYC 1 cut(s) 93
Fsp4HI GCNGC 2 cut(s) 150, 276
FspBI CTAG 2 cut(s) 219, 383
GlaI GCGC 1 cut(s) 159
GluI GCNGC 2 cut(s) 150, 276
HaeIII GGCC 1 cut(s) 21
HgaI GACGC 1 cut(s) 119
HhaI GCGC 1 cut(s) 160
Hin1II CATG 1 cut(s) 194
Hin6I GCGC 1 cut(s) 158
HinP1I GCGC 1 cut(s) 158
HphI GGTGA 1 cut(s) 352
Hpy188I TCNGA 4 cut(s) 37, 58, 69, 88
Hpy188III TCNNGA 2 cut(s) 199, 359
Hpy99I CGWCG 1 cut(s) 113
HpyAV CCTTC 1 cut(s) 233
HpyCH4V TGCA 5 cut(s) 143, 305, 311, 350, 365
HpyF10VI GCNNNNNNNGC 4 cut(s) 140, 149, 155, 191
HpyF3I CTNAG 3 cut(s) 34, 87, 92
Hsp92II CATG 1 cut(s) 194
HspAI GCGC 1 cut(s) 158
Kzo9I GATC 1 cut(s) 440
LmnI GCTCC 1 cut(s) 59
Lsp1109I GCAGC 2 cut(s) 136, 287
LweI GCATC 4 cut(s) 186, 352, 395, 405
MaeI CTAG 2 cut(s) 219, 383
MalI GATC 1 cut(s) 442
MboI GATC 1 cut(s) 440
MboII GAAGA 1 cut(s) 16
MhlI GDGCHC 1 cut(s) 93
MluCI AATT 2 cut(s) 82, 230
MnlI CCTC 2 cut(s) 32, 261
MslI CAYNNNNRTG 1 cut(s) 360
MspR9I CCNGG 1 cut(s) 182
Mva1269I GAATGC 2 cut(s) 228, 307
MvaI CCWGG 1 cut(s) 182
MwoI GCNNNNNNNGC 4 cut(s) 140, 149, 155, 191
NdeII GATC 1 cut(s) 440
NlaIII CATG 1 cut(s) 194
NspI RCATGY 1 cut(s) 194
PaeI GCATGC 1 cut(s) 194
PaqCI CACCTGC 1 cut(s) 316
PceI AGGCCT 1 cut(s) 21
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 2 cut(s) 228, 307
PflFI GACNNNGTC 1 cut(s) 317
PkrI GCNGC 2 cut(s) 151, 277
Psp124BI GAGCTC 1 cut(s) 93
Psp6I CCWGG 1 cut(s) 180
PspGI CCWGG 1 cut(s) 180
PstI CTGCAG 1 cut(s) 313
PstNI CAGNNNCTG 1 cut(s) 149
PsyI GACNNNGTC 1 cut(s) 317
RseI CAYNNNNRTG 1 cut(s) 360
SacI GAGCTC 1 cut(s) 93
SatI GCNGC 2 cut(s) 150, 276
Sau3AI GATC 1 cut(s) 440
ScrFI CCNGG 1 cut(s) 182
SduI GDGCHC 1 cut(s) 93
SfaNI GCATC 4 cut(s) 186, 352, 395, 405
SfcI CTRYAG 1 cut(s) 309
SmiMI CAYNNNNRTG 1 cut(s) 360
SphI GCATGC 1 cut(s) 194
Sse9I AATT 2 cut(s) 82, 230
SseBI AGGCCT 1 cut(s) 21
SsiI CCGC 3 cut(s) 209, 226, 369
SspMI CTAG 2 cut(s) 219, 383
SstI GAGCTC 1 cut(s) 93
StuI AGGCCT 1 cut(s) 21
StyD4I CCNGG 1 cut(s) 180
TaqI TCGA 1 cut(s) 108
TasI AATT 2 cut(s) 82, 230
TscAI CASTG 1 cut(s) 442
TseI GCWGC 2 cut(s) 149, 275
TspDTI ATGAA 3 cut(s) 87, 252, 414
TspRI CASTG 1 cut(s) 442
Tth111I GACNNNGTC 1 cut(s) 317
XagI CCTNNNNNAGG 1 cut(s) 363
XapI RAATTY 2 cut(s) 82, 230
XceI RCATGY 1 cut(s) 194
XspI CTAG 2 cut(s) 219, 383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.