MD01G1130500.v1.1

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
24112069 .. 24114087
2019 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1130500.v1.1.491

Sequence Viewer

Length: 231 bp
ATGCGAAAATTTTATGAAGGTGGCTTCCAGCCGACAATGACAAAGAGGGAAGCAGCTCTTATACTTGGCGTCAAGGAAAGTGCAGCTGCAGACAAGGTCAAGGAAGCACATAGAAAGGTGATGGTTGCGAACCATCCTGATGCAGGCGGCAGTCATTACCTTGCCTCCAAAATCAACGAAGCCAAAGATGTGATGCTCGGGAAGACAAAGGGCAGCGGATCAGCATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

77

Amino Acids

8.17

Weight (kDa)

9.7

Isoelectric Point (pI)

21.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015864)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G35795
fragaria_vesca FvH4_7g20090
malus_domestica MD01G1130500.v1.1 MD07G1178600.v1.1
prunus_persica Prupe.2G217700_v2.0.a1
pyrus_communis pycom01g13930 pycom07g17220
rosa_chinensis RchiOBHm_Chr1g0364051
rosa_multiflora Rmu_sc0009677.1_g000021
rosa_roxburghii Rroxscaffold_4G00292700
rosa_rugosa Rorug01G0313100
rosa_samantha Rh1AG320500 Rh1BG283700 Rh1CG300100
rosa_wichuraiana Rw1G028410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 147, 216
AclWI GGATC 1 cut(s) 226
AcsI RAATTY 1 cut(s) 8
AcyI GRCGYC 1 cut(s) 69
AfiI CCNNNNNNNGG 1 cut(s) 143
AluBI AGCT 2 cut(s) 56, 86
AluI AGCT 2 cut(s) 56, 86
AlwI GGATC 1 cut(s) 226
Ama87I CYCGRG 1 cut(s) 197
ApeKI GCWGC 4 cut(s) 53, 83, 86, 213
ApoI RAATTY 1 cut(s) 8
AsuHPI GGTGA 1 cut(s) 130
AvaI CYCGRG 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 209
BbvI GCAGC 4 cut(s) 65, 73, 95, 225
BccI CCATC 2 cut(s) 115, 141
BfmI CTRYAG 1 cut(s) 87
BisI GCNGC 5 cut(s) 54, 84, 87, 148, 214
BlsI GCNGC 5 cut(s) 55, 85, 88, 149, 215
BmeT110I CYCGRG 1 cut(s) 197
BmsI GCATC 2 cut(s) 130, 183
BpiI GAAGAC 1 cut(s) 209
BsaHI GRCGYC 1 cut(s) 69
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bsc4I CCNNNNNNNGG 1 cut(s) 143
BseGI GGATG 1 cut(s) 133
BseLI CCNNNNNNNGG 1 cut(s) 143
BseXI GCAGC 4 cut(s) 65, 73, 95, 225
BsgI GTGCAG 1 cut(s) 102
BsiHKCI CYCGRG 1 cut(s) 197
BslI CCNNNNNNNGG 1 cut(s) 143
BsoBI CYCGRG 1 cut(s) 197
Bsp143I GATC 1 cut(s) 218
BspACI CCGC 2 cut(s) 147, 216
BspMAI CTGCAG 1 cut(s) 91
BspPI GGATC 1 cut(s) 226
BssMI GATC 1 cut(s) 218
BssNI GRCGYC 1 cut(s) 69
BstACI GRCGYC 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 145
BstENI CCTNNNNNAGG 1 cut(s) 141
BstF5I GGATG 1 cut(s) 133
BstKTI GATC 1 cut(s) 221
BstMBI GATC 1 cut(s) 218
BstSFI CTRYAG 1 cut(s) 87
BstV1I GCAGC 4 cut(s) 65, 73, 95, 225
BstV2I GAAGAC 1 cut(s) 209
BtsCI GGATG 1 cut(s) 133
Cac8I GCNNGC 1 cut(s) 145
CseI GACGC 1 cut(s) 58
CviJI RGCY 5 cut(s) 24, 31, 56, 86, 182
CviKI_1 RGCY 5 cut(s) 24, 31, 56, 86, 182
DpnI GATC 1 cut(s) 220
DpnII GATC 1 cut(s) 218
Eco88I CYCGRG 1 cut(s) 197
EcoNI CCTNNNNNAGG 1 cut(s) 141
FaiI YATR 3 cut(s) 15, 62, 111
FalI AAGNNNNNCTT 2 cut(s) 42, 74
Fnu4HI GCNGC 5 cut(s) 54, 84, 87, 148, 214
FokI GGATG 1 cut(s) 120
Fsp4HI GCNGC 5 cut(s) 54, 84, 87, 148, 214
GluI GCNGC 5 cut(s) 54, 84, 87, 148, 214
HgaI GACGC 1 cut(s) 58
Hin1I GRCGYC 1 cut(s) 69
HphI GGTGA 1 cut(s) 130
Hpy188III TCNNGA 2 cut(s) 137, 199
HpyAV CCTTC 1 cut(s) 11
HpyCH4V TGCA 3 cut(s) 83, 89, 143
Hsp92I GRCGYC 1 cut(s) 69
Kzo9I GATC 1 cut(s) 218
LpnPI CCDG 3 cut(s) 41, 129, 150
Lsp1109I GCAGC 4 cut(s) 65, 73, 95, 225
LweI GCATC 2 cut(s) 130, 183
MalI GATC 1 cut(s) 220
MboI GATC 1 cut(s) 218
MboII GAAGA 1 cut(s) 214
MluCI AATT 1 cut(s) 8
MnlI CCTC 2 cut(s) 39, 175
MseI TTAA 1 cut(s) 229
MslI CAYNNNNRTG 1 cut(s) 138
MspA1I CMGCKG 2 cut(s) 86, 216
NdeII GATC 1 cut(s) 218
PflFI GACNNNGTC 1 cut(s) 95
PkrI GCNGC 5 cut(s) 55, 85, 88, 149, 215
PstI CTGCAG 1 cut(s) 91
PsyI GACNNNGTC 1 cut(s) 95
PvuII CAGCTG 1 cut(s) 86
RseI CAYNNNNRTG 1 cut(s) 138
SaqAI TTAA 1 cut(s) 229
SatI GCNGC 5 cut(s) 54, 84, 87, 148, 214
Sau3AI GATC 1 cut(s) 218
SetI ASST 6 cut(s) 22, 58, 88, 99, 120, 162
SfaNI GCATC 2 cut(s) 130, 183
SfcI CTRYAG 1 cut(s) 87
SmiMI CAYNNNNRTG 1 cut(s) 138
Sse9I AATT 1 cut(s) 8
SsiI CCGC 2 cut(s) 147, 216
TasI AATT 1 cut(s) 8
TauI GCSGC 1 cut(s) 150
Tru1I TTAA 1 cut(s) 229
Tru9I TTAA 1 cut(s) 229
TseI GCWGC 4 cut(s) 53, 83, 86, 213
TspDTI ATGAA 1 cut(s) 30
Tth111I GACNNNGTC 1 cut(s) 95
XagI CCTNNNNNAGG 1 cut(s) 141
XapI RAATTY 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.