pycom01g13930

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
14251377 .. 14253117
1741 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g13930.2

Sequence Viewer

Length: 339 bp
ATGGCTACACCATTTTTGGCTGGTCTTGCAGTAGCTGCTACTGCCCTTGCTGGTAGATATGGTATCCAGGCTTGGCATGCGTTCAAGACACGACCACCAAAAGCTAGAATGCGGAAATTTTATGAAGGTGGCTTCCAGCCGACAATGACAAAGAGGGAAGCAGCTCTTATTCTTGGTGTCAGGGAAAGTGCAGCTGCAGACAAGGTCAAGGAAGCACATAGAAAGGTGATGGTTGCGAACCATCCTGATGCAGGCGGCAGTCATTACCTTGCTTCCAAAATCAACGAAGCCAAAGATGTGATGCTCGGGAAGACAAAGGGCAGCGGATCAGCATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

113

Amino Acids

11.99

Weight (kDa)

10.24

Isoelectric Point (pI)

23.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015864)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G35795
fragaria_vesca FvH4_7g20090
malus_domestica MD01G1130500.v1.1 MD07G1178600.v1.1
prunus_persica Prupe.2G217700_v2.0.a1
pyrus_communis pycom01g13930 pycom07g17220
rosa_chinensis RchiOBHm_Chr1g0364051
rosa_multiflora Rmu_sc0009677.1_g000021
rosa_roxburghii Rroxscaffold_4G00292700
rosa_rugosa Rorug01G0313100
rosa_samantha Rh1AG320500 Rh1BG283700 Rh1CG300100
rosa_wichuraiana Rw1G028410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 112, 255, 324
AclWI GGATC 1 cut(s) 334
AcsI RAATTY 1 cut(s) 116
AfiI CCNNNNNNNGG 1 cut(s) 251
AgsI TTSAA 1 cut(s) 85
AjnI CCWGG 1 cut(s) 66
AluBI AGCT 4 cut(s) 35, 104, 164, 194
AluI AGCT 4 cut(s) 35, 104, 164, 194
AlwI GGATC 1 cut(s) 334
AlwNI CAGNNNCTG 1 cut(s) 35
Ama87I CYCGRG 1 cut(s) 305
ApeKI GCWGC 5 cut(s) 35, 161, 191, 194, 321
ApoI RAATTY 1 cut(s) 116
AsuHPI GGTGA 1 cut(s) 238
AvaI CYCGRG 1 cut(s) 305
BbsI GAAGAC 1 cut(s) 317
BbvI GCAGC 5 cut(s) 22, 173, 181, 203, 333
BccI CCATC 2 cut(s) 223, 249
BciT130I CCWGG 1 cut(s) 68
BciVI GTATCC 1 cut(s) 74
BfaI CTAG 1 cut(s) 105
BfmI CTRYAG 1 cut(s) 195
BfuI GTATCC 1 cut(s) 74
BisI GCNGC 6 cut(s) 36, 162, 192, 195, 256, 322
BlsI GCNGC 6 cut(s) 37, 163, 193, 196, 257, 323
Bme1390I CCNGG 1 cut(s) 68
BmeT110I CYCGRG 1 cut(s) 305
BmrFI CCNGG 1 cut(s) 68
BmsI GCATC 2 cut(s) 238, 291
BpiI GAAGAC 1 cut(s) 317
Bsc4I CCNNNNNNNGG 1 cut(s) 251
BseBI CCWGG 1 cut(s) 68
BseGI GGATG 1 cut(s) 241
BseLI CCNNNNNNNGG 1 cut(s) 251
BseXI GCAGC 5 cut(s) 22, 173, 181, 203, 333
BsgI GTGCAG 1 cut(s) 210
BsiHKCI CYCGRG 1 cut(s) 305
BslI CCNNNNNNNGG 1 cut(s) 251
BsmI GAATGC 1 cut(s) 114
BsoBI CYCGRG 1 cut(s) 305
Bsp143I GATC 1 cut(s) 326
BspACI CCGC 3 cut(s) 112, 255, 324
BspMAI CTGCAG 1 cut(s) 199
BspPI GGATC 1 cut(s) 334
BssMI GATC 1 cut(s) 326
Bst2UI CCWGG 1 cut(s) 68
BstAPI GCANNNNNTGC 1 cut(s) 35
BstC8I GCNNGC 2 cut(s) 78, 253
BstENI CCTNNNNNAGG 1 cut(s) 249
BstF5I GGATG 1 cut(s) 241
BstKTI GATC 1 cut(s) 329
BstMBI GATC 1 cut(s) 326
BstMWI GCNNNNNNNGC 4 cut(s) 26, 35, 41, 77
BstNI CCWGG 1 cut(s) 68
BstNSI RCATGY 1 cut(s) 80
BstSCI CCNGG 1 cut(s) 66
BstSFI CTRYAG 1 cut(s) 195
BstV1I GCAGC 5 cut(s) 22, 173, 181, 203, 333
BstV2I GAAGAC 1 cut(s) 317
BsuI GTATCC 1 cut(s) 74
BtsCI GGATG 1 cut(s) 241
Cac8I GCNNGC 2 cut(s) 78, 253
CaiI CAGNNNCTG 1 cut(s) 35
CviAII CATG 1 cut(s) 77
DpnI GATC 1 cut(s) 328
DpnII GATC 1 cut(s) 326
Eco88I CYCGRG 1 cut(s) 305
EcoNI CCTNNNNNAGG 1 cut(s) 249
EcoRII CCWGG 1 cut(s) 66
FaeI CATG 1 cut(s) 80
FaiI YATR 4 cut(s) 60, 78, 123, 219
FalI AAGNNNNNCTT 2 cut(s) 150, 182
FatI CATG 1 cut(s) 76
Fnu4HI GCNGC 6 cut(s) 36, 162, 192, 195, 256, 322
FokI GGATG 1 cut(s) 228
Fsp4HI GCNGC 6 cut(s) 36, 162, 192, 195, 256, 322
FspBI CTAG 1 cut(s) 105
GluI GCNGC 6 cut(s) 36, 162, 192, 195, 256, 322
Hin1II CATG 1 cut(s) 80
HphI GGTGA 1 cut(s) 238
Hpy188III TCNNGA 3 cut(s) 85, 245, 307
HpyAV CCTTC 1 cut(s) 119
HpyCH4V TGCA 4 cut(s) 29, 191, 197, 251
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 35, 41, 77
Hsp92II CATG 1 cut(s) 80
Kzo9I GATC 1 cut(s) 326
LpnPI CCDG 8 cut(s) 6, 36, 53, 80, 149, 166, 237, 258
Lsp1109I GCAGC 5 cut(s) 22, 173, 181, 203, 333
LweI GCATC 2 cut(s) 238, 291
MaeI CTAG 1 cut(s) 105
MalI GATC 1 cut(s) 328
MboI GATC 1 cut(s) 326
MboII GAAGA 1 cut(s) 322
MluCI AATT 1 cut(s) 116
MnlI CCTC 1 cut(s) 147
MseI TTAA 1 cut(s) 337
MslI CAYNNNNRTG 1 cut(s) 246
MspA1I CMGCKG 2 cut(s) 194, 324
MspR9I CCNGG 1 cut(s) 68
Mva1269I GAATGC 1 cut(s) 114
MvaI CCWGG 1 cut(s) 68
MwoI GCNNNNNNNGC 4 cut(s) 26, 35, 41, 77
NdeII GATC 1 cut(s) 326
NlaIII CATG 1 cut(s) 80
NspI RCATGY 1 cut(s) 80
PaeI GCATGC 1 cut(s) 80
PctI GAATGC 1 cut(s) 114
PflFI GACNNNGTC 1 cut(s) 203
PkrI GCNGC 6 cut(s) 37, 163, 193, 196, 257, 323
Psp6I CCWGG 1 cut(s) 66
PspGI CCWGG 1 cut(s) 66
PstI CTGCAG 1 cut(s) 199
PstNI CAGNNNCTG 1 cut(s) 35
PsyI GACNNNGTC 1 cut(s) 203
PvuII CAGCTG 1 cut(s) 194
RseI CAYNNNNRTG 1 cut(s) 246
SaqAI TTAA 1 cut(s) 337
SatI GCNGC 6 cut(s) 36, 162, 192, 195, 256, 322
Sau3AI GATC 1 cut(s) 326
ScrFI CCNGG 1 cut(s) 68
SetI ASST 8 cut(s) 37, 106, 130, 166, 196, 207, 228, 270
SfaNI GCATC 2 cut(s) 238, 291
SfcI CTRYAG 1 cut(s) 195
SmiMI CAYNNNNRTG 1 cut(s) 246
SphI GCATGC 1 cut(s) 80
Sse9I AATT 1 cut(s) 116
SsiI CCGC 3 cut(s) 112, 255, 324
SspMI CTAG 1 cut(s) 105
StyD4I CCNGG 1 cut(s) 66
TasI AATT 1 cut(s) 116
TauI GCSGC 1 cut(s) 258
Tru1I TTAA 1 cut(s) 337
Tru9I TTAA 1 cut(s) 337
TseI GCWGC 5 cut(s) 35, 161, 191, 194, 321
TspDTI ATGAA 1 cut(s) 138
Tth111I GACNNNGTC 1 cut(s) 203
XagI CCTNNNNNAGG 1 cut(s) 249
XapI RAATTY 1 cut(s) 116
XceI RCATGY 1 cut(s) 80
XspI CTAG 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.