Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005666

Physical Location & Seq

Genomic Coordinates Forward (+)

15264211 .. 15270092

Gene Structure 5882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G36390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGGTTTACACGATTTCAGGCGTACGTTTTCCTCATCTTCCATCGATTAAGAAGAAGAATTCGTCTCTTCACAGTTTCAATGAAGATCTCAGGAGAAGCAACGCTGTCTCATTCTCTCTGAGGAAGGACTCTCGTTCTTCTGGGAAGGTTTTTGCTCGGAAGCCATCGTATGATTCTGATTCGTCTTCCTTAGCTACCACTGCATCTGAGAAGCTCCGTGGCCATCAGAGTGATAGCTCTTCATCTGCCTCTGATCAAGTACAATCTCGGGATACTGTCTCTGACGATACTCAGGTGCTCGGCAATGTAGACGTTCAGAAAACTGAAGAAGCCCAGGAAACAGAGACACTAGATCAAACTTCTGCACTCTCAACATCTGGAAGCATAAGTTATAAAGAAGATTTTGCAAAGATGTCACACTCTGTCGACCAAGAAGTTGGGCAGAGGAAGATTCCACCTCCTGGAGATGGGAAGAGAATATATGACATTGATCCTATGTTGAACAGTCATCGTAATCATCTTGATTACCGATATGGGCAGTACAGAAAACTGCGTGAAGAAATTGACAAGAATGAAGGTGGTTTGGAGGCATTTTCTCGTGGTTATGAAATATTTGGCTTCACTCGAAGCGCCACTGGTATCACTTACCGGGAATGGGCACCGGGAGCTAAGGCAGCATCACTGATCGGAGATTTTAATAACTGGAATGCGAAATCTGATGTTATGGCTCGGAACGACTTTGGTGTGTGGGAAATATTTCTGCCAAATAATGCTGATGGCTCACCAGCAATTCCCCATGGCTCCCGTGTGAAGATCCGCATGGATACCCCATCTGGTATTAAAGACTCCATTCCAGCTTGGATCAAGTATTCTGTCCAGCCACCTGGCGAGATCCCATATAATGGAGTATATTATGACCCTCCTGAGGAGGATAAATATGCGTTCAAACATCCTCGTCCAAAGAAACCCACATCGCTGCGTATATATGAATCACATGTTGGAATGAGTAGTACGGAACCAAAGATAAATACATATGCCAACTTTAGAGATGATGTACTTCCCCGTATAAAAAAGCTAGGCTATAATGCTGTGCAGATAATGGCCATTCAAGAGCATGCCTACTATGCCAGCTTTGGGTATCATGTGACAAATTTTTTCGCACCTAGCAGCCGCTTTGGAACACCTGATGACCTTAAATCTTTGATAGACAAAGCTCATGAGCTAGGTCTGGTTGTTCTGATGGATATTGTGCACAGCCATGCATCAAAAAACACACTGGATGGCCTGGACATGTTTGATGGTACTGATGGTCAATATTTCCACTCTGGATCGCGTGGTTATCATTGGATGTGGGATTCTCGTCTTTTCAATTACGGAAGCTGGGAAGTGCTTAGGTATCTTCTTTCCAACGCGAGATGGTGGCTGGAAGAATACAAGTTTGATGGGTTCAGATTTGATGGTGTGACTTCCATGATGTACACTCATCATGGACTGCAGGTCGAATTTACTGGGAATTACAATGAGTACTTTGGATATTCTACTGATGTTGACGCTGTGGTCTATCTAATGCTGGTGAACGATTTGATTCATGGGCTATACCCTGAGGCTATTGTTGTCGGCGAAGATGTTAGCGGGATGCCAGCTTTTTGCGTTCCTGTCGAAGACGGTGGTGTGGGTTTTGACTACCGTCTACACATGGCAGTGGCAGATAAATGGATTGAGCTTCTTAAGAAGAGAGACGAGGACTGGCAGGTTGGTGATATAACTTTCACGCTTACCAACAGGAGGTGGGGAGAAAAATGTGTCGTCTATGCAGAGAGTCATGATCAAGCCCTTGTTGGAGACAAAACGATAGCTTTCTGGCTAATGGATAAGGACATGTATGATTTCATGGCCGTTGATAGACAGGCCACTCCGCGTGTAGACCGTGGGATTGCTTTACACAAAATGATCCGTCTCATTACGATGGGATTGGGTGGAGAAGGATACCTCAATTTCATGGGAAACGAATTTGGACACCCAGAATGGATCGACTTCCCAAGGACCGACCAGCACCTTCCTGATGGCAGAGTCATCGCTGGGAATAATGGTAGTTATGATAAATGCCGACGTAGGTTTGATCTGGGAGATGCAGAATATCTTAGATACCATGGACTACAAGAGTTTGATCGAGCAATGCAAAATCTAGAGGAGACGTATGGTTTCATGACTTCAGAGCACCAGTACATATCCCGCAAGGATGAAGGAGACAGAGTCATTGTATTCGAGAGAGGTAACTTGCTCTTCGTCTTCAACTTCCACTGGACCAACAGTTACTCTGACTACCGTATCGGTTGCTCTGTTCCCGGAAAGTACAAAATCGTTTTGGACTCTGATAACTCTTTATTTGGAGGCTTCAACCGGCTAGATGACTCCGCGGAGTTTTTCACCTCTGATGGAAGGCACGACGATAGGCCTTGCTCCTTCATGGTGTATGCACCGTGCAGAACCGCTGTAGTTTACGCTGCAGTAGATGATGATGATGATGATGAACGTTCTTCTCTTGTCCCCATAGGCCTGTTACCCGAAGATGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001678 GO:0003674 GO:0003824 GO:0003844 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009501 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009987 GO:0010021 GO:0010033 GO:0016740 GO:0016757 GO:0016758 GO:0019725 GO:0033500 GO:0034284 GO:0034285 GO:0042221 GO:0042592 GO:0042593 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0051716 GO:0055082 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071310 GO:0071322 GO:0071324 GO:0071326 GO:0071329 GO:0071331 GO:0071332 GO:0071333 GO:0071478 GO:0071482 GO:0071704 GO:0104004 GO:1901135 GO:1901137 GO:1901576 GO:1901700 GO:1901701 GO:2000896

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Alpha-amylase Alpha-amylase_C CBM_48

Protein Analysis

858

Amino Acids

97.66

Weight (kDa)

5.34

Isoelectric Point (pI)

34.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBM_48	PF02922	205 - 287	1.4e-19	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha-amylase	PF00128	353 - 553	3.5e-12	Alpha amylase, catalytic domain
Alpha-amylase_C	PF02806	742 - 835	2.4e-23	Alpha amylase, C-terminal all-beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36390 AT5G03650
fragaria_vesca	FvH4_6g18120 FvH4_6g18120 FvH4_6g18120 FvH4_6g18120 FvH4_6g18120
malus_domestica	MD12G1020600.v1.1 MD14G1017700.v1.1
prunus_persica	Prupe.7G115400_v2.0.a1 Prupe.7G115400_v2.0.a1
pyrus_communis	pycom12g01930 pycom14g01610
rosa_chinensis	RchiOBHm_Chr3g0472421
rosa_laevigata	RLG00000024081
rosa_multiflora	Rmu_co8370739.1_g000001 Rmu_sc0001096.1_g000015
rosa_roxburghii	Rroxscaffold_6G00408930
rosa_rugosa	Rorug03G0124700 Rorug03G0124700 Rorug03G0124800 Rorug03G0124900
rosa_samantha	Rh3AG177100 Rh3BG203100 Rh3CG193400 Rh3CG200600 Rh3DG172000
rosa_wichuraiana	Rw3G016440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	393
AasI	GACNNNNNNGTC	1 cut(s)	1556
Acc36I	ACCTGC	2 cut(s)	1486, 1741
AccB1I	GGYRCC	1 cut(s)	658
AccB7I	CCANNNNNTGG	2 cut(s)	461, 902
AccI	GTMKAC	4 cut(s)	309, 426, 1690, 1923
AccII	CGCG	4 cut(s)	1333, 1412, 1918, 2417
AciI	CCGC	8 cut(s)	817, 1171, 1632, 1916, 2233, 2415, 2417, 2490
AclI	AACGTT	1 cut(s)	2533
AclWI	GGATC	7 cut(s)	485, 808, 869, 886, 1336, 1945, 2036
AcoI	YGGCCR	3 cut(s)	220, 1101, 1893
AcsI	RAATTY	4 cut(s)	58, 1150, 1502, 2009
AcuI	CTGAAG	2 cut(s)	345, 2196
AfiI	CCNNNNNNNGG	7 cut(s)	461, 467, 655, 902, 925, 1134, 1785
AflII	CTTAAG	1 cut(s)	1727
AflIII	ACRYGT	3 cut(s)	994, 1290, 1878
AgsI	TTSAA	7 cut(s)	79, 502, 946, 1109, 1369, 2293, 2398
AhdI	GACNNNNNGTC	1 cut(s)	1496
AjnI	CCWGG	4 cut(s)	333, 460, 883, 1284
AjuI	GAANNNNNNNTTGG	2 cut(s)	981, 1013
Alw21I	GWGCWC	3 cut(s)	300, 1254, 2220
Alw26I	GTCTC	9 cut(s)	69, 112, 283, 338, 1731, 1836, 1961, 2186, 2241
Alw44I	GTGCAC	1 cut(s)	1250
AlwI	GGATC	7 cut(s)	485, 808, 869, 886, 1336, 1945, 2036
Ama87I	CYCGRG	1 cut(s)	267
AoxI	GGCC	7 cut(s)	220, 1101, 1282, 1893, 1908, 2453, 2554
ApaLI	GTGCAC	1 cut(s)	1250
ApeKI	GCWGC	4 cut(s)	674, 976, 1167, 2504
ApoI	RAATTY	4 cut(s)	58, 1150, 1502, 2009
Asp700I	GAANNNNTTC	1 cut(s)	756
AspLEI	GCGC	1 cut(s)	632
AspS9I	GGNCC	2 cut(s)	2043, 2304
AsuC2I	CCSGG	3 cut(s)	650, 663, 2346
AsuHPI	GGTGA	4 cut(s)	774, 1585, 1769, 2419
AvaI	CYCGRG	1 cut(s)	267
AvaII	GGWCC	2 cut(s)	2043, 2304
AxyI	CCTNAGG	2 cut(s)	924, 1602
BaeGI	GKGCMC	2 cut(s)	661, 1254
BaeI	ACNNNNGTAYC	4 cut(s)	279, 312, 2311, 2344
BalI	TGGCCA	2 cut(s)	222, 1103
BanI	GGYRCC	1 cut(s)	658
BauI	CACGAG	1 cut(s)	597
BbsI	GAAGAC	3 cut(s)	177, 1668, 2281
Bbv12I	GWGCWC	3 cut(s)	300, 1254, 2220
BbvI	GCAGC	4 cut(s)	686, 963, 1179, 2491
BceAI	ACGGC	1 cut(s)	1880
BcgI	CGANNNNNNTGC	2 cut(s)	2056, 2090
BciT130I	CCWGG	4 cut(s)	335, 462, 885, 1286
BciVI	GTATCC	3 cut(s)	265, 817, 1979
BclI	TGATCA	2 cut(s)	253, 1825
BcnI	CCSGG	3 cut(s)	650, 663, 2346
BcoDI	GTCTC	9 cut(s)	69, 112, 283, 338, 1731, 1836, 1961, 2186, 2241
BfaI	CTAG	6 cut(s)	350, 1076, 1164, 1223, 2186, 2405
BfmI	CTRYAG	3 cut(s)	1493, 2493, 2505
BfoI	RGCGCY	1 cut(s)	633
BfrI	CTTAAG	1 cut(s)	1727
BfuAI	ACCTGC	2 cut(s)	1486, 1741
BfuI	GTATCC	3 cut(s)	265, 817, 1979
BglII	AGATCT	1 cut(s)	85
BisI	GCNGC	5 cut(s)	675, 977, 1168, 1171, 2505
BlsI	GCNGC	5 cut(s)	676, 978, 1169, 1172, 2506
BmcAI	AGTACT	1 cut(s)	1526
Bme1390I	CCNGG	7 cut(s)	335, 462, 650, 663, 885, 1286, 2346
Bme18I	GGWCC	2 cut(s)	2043, 2304
BmeRI	GACNNNNNGTC	1 cut(s)	1496
BmeT110I	CYCGRG	1 cut(s)	267
BmgT120I	GGNCC	2 cut(s)	2043, 2304
BmiI	GGNNCC	3 cut(s)	660, 802, 1017
BmrFI	CCNGG	7 cut(s)	335, 462, 650, 663, 885, 1286, 2346
BmrI	ACTGGG	1 cut(s)	1518
BmsI	GCATC	5 cut(s)	212, 686, 1271, 1626, 2119
BmuI	ACTGGG	1 cut(s)	1518
BoxI	GACNNNNGTC	1 cut(s)	1686
BpiI	GAAGAC	3 cut(s)	177, 1668, 2281
BpmI	CTGGAG	1 cut(s)	483
Bpu10I	CCTNAGC	3 cut(s)	190, 669, 1391
BpuMI	CCSGG	3 cut(s)	650, 663, 2346
Bsa29I	ATCGAT	1 cut(s)	44
BsaJI	CCNNGG	7 cut(s)	217, 333, 796, 1927, 2039, 2149, 2415
BsaXI	ACNNNNNCTCC	2 cut(s)	2238, 2268
Bsc4I	CCNNNNNNNGG	7 cut(s)	461, 467, 655, 902, 925, 1134, 1785
Bse118I	RCCGGY	1 cut(s)	2400
Bse1I	ACTGG	7 cut(s)	640, 707, 1281, 1513, 1751, 2221, 2306
Bse21I	CCTNAGG	2 cut(s)	924, 1602
Bse3DI	GCAATG	2 cut(s)	310, 2181
BseBI	CCWGG	4 cut(s)	335, 462, 885, 1286
BseCI	ATCGAT	1 cut(s)	44
BseDI	CCNNGG	7 cut(s)	217, 333, 796, 1927, 2039, 2149, 2415
BseGI	GGATG	5 cut(s)	949, 1285, 1353, 1641, 2245
BseLI	CCNNNNNNNGG	7 cut(s)	461, 467, 655, 902, 925, 1134, 1785
BseMI	GCAATG	2 cut(s)	310, 2181
BseMII	CTCAG	6 cut(s)	103, 110, 198, 305, 915, 1593
BseNI	ACTGG	7 cut(s)	640, 707, 1281, 1513, 1751, 2221, 2306
BseRI	GAGGAG	2 cut(s)	941, 2204
BseSI	GKGCMC	2 cut(s)	661, 1254
BseXI	GCAGC	4 cut(s)	686, 963, 1179, 2491
BseYI	CCCAGC	2 cut(s)	1380, 2078
BsgI	GTGCAG	3 cut(s)	348, 1112, 2503
Bsh1236I	CGCG	4 cut(s)	1333, 1412, 1918, 2417
BshFI	GGCC	7 cut(s)	222, 1103, 1284, 1895, 1910, 2455, 2556
BshNI	GGYRCC	1 cut(s)	658
BshVI	ATCGAT	1 cut(s)	44
BsiHKAI	GWGCWC	3 cut(s)	300, 1254, 2220
BsiHKCI	CYCGRG	1 cut(s)	267
BsiSI	CCGG	4 cut(s)	649, 662, 2346, 2401
BsiWI	CGTACG	1 cut(s)	22
BslFI	GGGAC	1 cut(s)	2531
BslI	CCNNNNNNNGG	7 cut(s)	461, 467, 655, 902, 925, 1134, 1785
BsmAI	GTCTC	9 cut(s)	69, 112, 283, 338, 1731, 1836, 1961, 2186, 2241
BsmBI	CGTCTC	4 cut(s)	69, 1731, 1961, 2186
BsmFI	GGGAC	1 cut(s)	2531
BsmI	GAATGC	1 cut(s)	712
BsnI	GGCC	7 cut(s)	222, 1103, 1284, 1895, 1910, 2455, 2556
BsoBI	CYCGRG	1 cut(s)	267
Bsp1286I	GDGCHC	4 cut(s)	300, 661, 1254, 2220
Bsp1407I	TGTACA	1 cut(s)	1476
Bsp19I	CCATGG	2 cut(s)	796, 2149
BspACI	CCGC	8 cut(s)	817, 1171, 1632, 1916, 2233, 2415, 2417, 2490
BspANI	GGCC	7 cut(s)	222, 1103, 1284, 1895, 1910, 2455, 2556
BspCNI	CTCAG	6 cut(s)	102, 111, 199, 304, 916, 1594
BspDI	ATCGAT	1 cut(s)	44
BspFNI	CGCG	4 cut(s)	1333, 1412, 1918, 2417
BspHI	TCATGA	3 cut(s)	1216, 1822, 2205
BspLI	GGNNCC	3 cut(s)	660, 802, 1017
BspMAI	CTGCAG	2 cut(s)	1497, 2509
BspMI	ACCTGC	2 cut(s)	1486, 1741
BspPI	GGATC	7 cut(s)	485, 808, 869, 886, 1336, 1945, 2036
BspQI	GCTCTTC	2 cut(s)	244, 2288
BspT107I	GGYRCC	1 cut(s)	658
BspTI	CTTAAG	1 cut(s)	1727
BsrDI	GCAATG	2 cut(s)	310, 2181
BsrFI	RCCGGY	1 cut(s)	2400
BsrGI	TGTACA	1 cut(s)	1476
BsrI	ACTGG	7 cut(s)	640, 707, 1281, 1513, 1751, 2221, 2306
BssAI	RCCGGY	1 cut(s)	2400
BssECI	CCNNGG	7 cut(s)	217, 333, 796, 1927, 2039, 2149, 2415
BssSI	CACGAG	1 cut(s)	597
BssT1I	CCWWGG	3 cut(s)	796, 2039, 2149
Bst2BI	CACGAG	1 cut(s)	597
Bst2UI	CCWGG	4 cut(s)	335, 462, 885, 1286
Bst4CI	ACNGT	9 cut(s)	74, 277, 506, 1667, 1688, 1928, 2312, 2327, 2481
Bst6I	CTCTTC	5 cut(s)	72, 244, 467, 1727, 2288
BstAFI	CTTAAG	1 cut(s)	1727
BstAUI	TGTACA	1 cut(s)	1476
BstC8I	GCNNGC	3 cut(s)	1116, 1129, 1641
BstDSI	CCRYGG	5 cut(s)	217, 796, 1927, 2149, 2415
BstF5I	GGATG	5 cut(s)	949, 1285, 1353, 1641, 2245
BstFNI	CGCG	4 cut(s)	1333, 1412, 1918, 2417
BstH2I	RGCGCY	1 cut(s)	633
BstHHI	GCGC	1 cut(s)	632
BstMAI	GTCTC	9 cut(s)	69, 112, 283, 338, 1731, 1836, 1961, 2186, 2241
BstMWI	GCNNNNNNNGC	4 cut(s)	200, 665, 674, 1124
BstNI	CCWGG	4 cut(s)	335, 462, 885, 1286
BstNSI	RCATGY	4 cut(s)	998, 1118, 1294, 1882
BstPAI	GACNNNNGTC	1 cut(s)	1686
BstSCI	CCNGG	7 cut(s)	333, 460, 648, 661, 883, 1284, 2344
BstSFI	CTRYAG	3 cut(s)	1493, 2493, 2505
BstSLI	GKGCMC	2 cut(s)	661, 1254
BstUI	CGCG	4 cut(s)	1333, 1412, 1918, 2417
BstV1I	GCAGC	4 cut(s)	686, 963, 1179, 2491
BstV2I	GAAGAC	3 cut(s)	177, 1668, 2281
BstX2I	RGATCY	3 cut(s)	85, 813, 891
BstXI	CCANNNNNNTGG	2 cut(s)	437, 884
BstYI	RGATCY	3 cut(s)	85, 813, 891
Bsu15I	ATCGAT	1 cut(s)	44
Bsu36I	CCTNAGG	2 cut(s)	924, 1602
BsuI	GTATCC	3 cut(s)	265, 817, 1979
BsuRI	GGCC	7 cut(s)	222, 1103, 1284, 1895, 1910, 2455, 2556
BsuTUI	ATCGAT	1 cut(s)	44
BtgI	CCRYGG	5 cut(s)	217, 796, 1927, 2149, 2415
BtgZI	GCGATG	2 cut(s)	957, 2059
BtsCI	GGATG	5 cut(s)	949, 1285, 1353, 1641, 2245
BtsI	GCAGTG	2 cut(s)	198, 1707
BtsIMutI	CAGTG	6 cut(s)	198, 633, 680, 1274, 1707, 2299
BveI	ACCTGC	2 cut(s)	1486, 1741
Cac8I	GCNNGC	3 cut(s)	1116, 1129, 1641
CciI	TCATGA	3 cut(s)	1216, 1822, 2205
CfoI	GCGC	1 cut(s)	632
Cfr10I	RCCGGY	1 cut(s)	2400
Cfr13I	GGNCC	2 cut(s)	2043, 2304
Cfr42I	CCGCGG	1 cut(s)	2418
ClaI	ATCGAT	1 cut(s)	44
CseI	GACGC	1 cut(s)	1559
DrdI	GACNNNNNNGTC	1 cut(s)	1556
DriI	GACNNNNNGTC	1 cut(s)	1496
DseDI	GACNNNNNNGTC	1 cut(s)	1556
EaeI	YGGCCR	3 cut(s)	220, 1101, 1893
Eam1104I	CTCTTC	5 cut(s)	72, 244, 467, 1727, 2288
Eam1105I	GACNNNNNGTC	1 cut(s)	1496
EarI	CTCTTC	5 cut(s)	72, 244, 467, 1727, 2288
Eco130I	CCWWGG	3 cut(s)	796, 2039, 2149
Eco147I	AGGCCT	2 cut(s)	2455, 2556
Eco47I	GGWCC	2 cut(s)	2043, 2304
Eco57I	CTGAAG	2 cut(s)	345, 2196
Eco81I	CCTNAGG	2 cut(s)	924, 1602
Eco88I	CYCGRG	1 cut(s)	267
EcoRI	GAATTC	1 cut(s)	58
EcoRII	CCWGG	4 cut(s)	333, 460, 883, 1284
EcoT14I	CCWWGG	3 cut(s)	796, 2039, 2149
EcoT22I	ATGCAT	1 cut(s)	1264
ErhI	CCWWGG	3 cut(s)	796, 2039, 2149
Esp3I	CGTCTC	4 cut(s)	69, 1731, 1961, 2186
FaqI	GGGAC	1 cut(s)	2531
FauI	CCCGC	2 cut(s)	1625, 2240
FauNDI	CATATG	1 cut(s)	1033
FbaI	TGATCA	2 cut(s)	253, 1825
FblI	GTMKAC	4 cut(s)	309, 426, 1690, 1923
Fnu4HI	GCNGC	5 cut(s)	675, 977, 1168, 1171, 2505
FokI	GGATG	5 cut(s)	936, 1292, 1360, 1648, 2252
Fsp4HI	GCNGC	5 cut(s)	675, 977, 1168, 1171, 2505
FspBI	CTAG	6 cut(s)	350, 1076, 1164, 1223, 2186, 2405
GlaI	GCGC	1 cut(s)	631
GluI	GCNGC	5 cut(s)	675, 977, 1168, 1171, 2505
GsaI	CCCAGC	2 cut(s)	1384, 2082
GsuI	CTGGAG	1 cut(s)	483
HaeII	RGCGCY	1 cut(s)	633
HaeIII	GGCC	7 cut(s)	222, 1103, 1284, 1895, 1910, 2455, 2556
HapII	CCGG	4 cut(s)	649, 662, 2346, 2401
HgaI	GACGC	1 cut(s)	1559
HhaI	GCGC	1 cut(s)	632
Hin6I	GCGC	1 cut(s)	630
HinP1I	GCGC	1 cut(s)	630
HincII	GTYRAC	2 cut(s)	427, 1549
HindII	GTYRAC	2 cut(s)	427, 1549
HpaII	CCGG	4 cut(s)	649, 662, 2346, 2401
HphI	GGTGA	4 cut(s)	774, 1585, 1769, 2419
Hpy99I	CGWCG	2 cut(s)	2112, 2450
HpyAV	CCTTC	8 cut(s)	118, 139, 569, 1976, 2066, 2237, 2433, 2473
HpyCH4III	ACNGT	9 cut(s)	74, 277, 506, 1667, 1688, 1928, 2312, 2327, 2481
HpyCH4IV	ACGT	5 cut(s)	25, 312, 2110, 2195, 2533
HpyF10VI	GCNNNNNNNGC	4 cut(s)	200, 665, 674, 1124
HpySE526I	ACGT	5 cut(s)	25, 312, 2110, 2195, 2533
HspAI	GCGC	1 cut(s)	630
Ksp22I	TGATCA	2 cut(s)	253, 1825
KspI	CCGCGG	1 cut(s)	2418
LguI	GCTCTTC	2 cut(s)	244, 2288
LmnI	GCTCC	4 cut(s)	219, 665, 806, 2465
Lsp1109I	GCAGC	4 cut(s)	686, 963, 1179, 2491
LweI	GCATC	5 cut(s)	212, 686, 1271, 1626, 2119
MaeI	CTAG	6 cut(s)	350, 1076, 1164, 1223, 2186, 2405
MaeII	ACGT	5 cut(s)	25, 312, 2110, 2195, 2533
MaeIII	GTNAC	6 cut(s)	414, 1144, 1462, 2273, 2312, 2559
MflI	RGATCY	3 cut(s)	85, 813, 891
MhlI	GDGCHC	4 cut(s)	300, 661, 1254, 2220
MlsI	TGGCCA	2 cut(s)	222, 1103
MluCI	AATT	9 cut(s)	58, 561, 789, 1150, 1369, 1502, 1513, 1993, 2009
MluNI	TGGCCA	2 cut(s)	222, 1103
MlyI	GAGTC	7 cut(s)	122, 839, 1828, 2079, 2262, 2363, 2405
MmeI	TCCRAC	3 cut(s)	979, 1431, 1819
Mox20I	TGGCCA	2 cut(s)	222, 1103
Mph1103I	ATGCAT	1 cut(s)	1264
MroXI	GAANNNNTTC	1 cut(s)	756
MscI	TGGCCA	2 cut(s)	222, 1103
MseI	TTAA	5 cut(s)	48, 696, 840, 1194, 1728
MslI	CAYNNNNRTG	4 cut(s)	228, 1257, 1700, 1964
Msp20I	TGGCCA	2 cut(s)	222, 1103
MspA1I	CMGCKG	2 cut(s)	2417, 2492
MspCI	CTTAAG	1 cut(s)	1727
MspI	CCGG	4 cut(s)	649, 662, 2346, 2401
MspR9I	CCNGG	7 cut(s)	335, 462, 650, 663, 885, 1286, 2346
Mva1269I	GAATGC	1 cut(s)	712
MvaI	CCWGG	4 cut(s)	335, 462, 885, 1286
MvnI	CGCG	4 cut(s)	1333, 1412, 1918, 2417
MwoI	GCNNNNNNNGC	4 cut(s)	200, 665, 674, 1124
NciI	CCSGG	3 cut(s)	650, 663, 2346
NcoI	CCATGG	2 cut(s)	796, 2149
NdeI	CATATG	1 cut(s)	1033
NlaIV	GGNNCC	3 cut(s)	660, 802, 1017
NmeAIII	GCCGAG	1 cut(s)	279
NmuCI	GTSAC	3 cut(s)	414, 1144, 1462
NsiI	ATGCAT	1 cut(s)	1264
NspI	RCATGY	4 cut(s)	998, 1118, 1294, 1882
PaeI	GCATGC	1 cut(s)	1118
PagI	TCATGA	3 cut(s)	1216, 1822, 2205
PceI	AGGCCT	2 cut(s)	2455, 2556
PciI	ACATGT	3 cut(s)	994, 1290, 1878
PciSI	GCTCTTC	2 cut(s)	244, 2288
PctI	GAATGC	1 cut(s)	712
PdmI	GAANNNNTTC	1 cut(s)	756
PfeI	GAWTC	6 cut(s)	173, 179, 451, 989, 1355, 1585
Pfl23II	CGTACG	1 cut(s)	22
PflFI	GACNNNGTC	1 cut(s)	2252
PflMI	CCANNNNNTGG	2 cut(s)	461, 902
PfoI	TCCNGGA	2 cut(s)	460, 2344
PkrI	GCNGC	5 cut(s)	676, 978, 1169, 1172, 2506
PleI	GAGTC	7 cut(s)	122, 839, 1827, 2078, 2261, 2363, 2405
PpsI	GAGTC	7 cut(s)	122, 839, 1827, 2078, 2261, 2363, 2405
PscI	ACATGT	3 cut(s)	994, 1290, 1878
PshAI	GACNNNNGTC	1 cut(s)	1686
PsiI	TTATAA	1 cut(s)	393
Psp1406I	AACGTT	1 cut(s)	2533
Psp6I	CCWGG	4 cut(s)	333, 460, 883, 1284
PspFI	CCCAGC	2 cut(s)	1380, 2078
PspGI	CCWGG	4 cut(s)	333, 460, 883, 1284
PspLI	CGTACG	1 cut(s)	22
PspN4I	GGNNCC	3 cut(s)	660, 802, 1017
PspPI	GGNCC	2 cut(s)	2043, 2304
PstI	CTGCAG	2 cut(s)	1497, 2509
PsuI	RGATCY	3 cut(s)	85, 813, 891
PsyI	GACNNNGTC	1 cut(s)	2252
RseI	CAYNNNNRTG	4 cut(s)	228, 1257, 1700, 1964
SacII	CCGCGG	1 cut(s)	2418
SalI	GTCGAC	1 cut(s)	425
SapI	GCTCTTC	2 cut(s)	244, 2288
SaqAI	TTAA	5 cut(s)	48, 696, 840, 1194, 1728
SatI	GCNGC	5 cut(s)	675, 977, 1168, 1171, 2505
Sau96I	GGNCC	2 cut(s)	2043, 2304
ScaI	AGTACT	1 cut(s)	1526
SchI	GAGTC	7 cut(s)	122, 839, 1828, 2079, 2262, 2363, 2405
ScrFI	CCNGG	7 cut(s)	335, 462, 650, 663, 885, 1286, 2346
SduI	GDGCHC	4 cut(s)	300, 661, 1254, 2220
SfaNI	GCATC	5 cut(s)	212, 686, 1271, 1626, 2119
SfcI	CTRYAG	3 cut(s)	1493, 2493, 2505
Sfr303I	CCGCGG	1 cut(s)	2418
SgrBI	CCGCGG	1 cut(s)	2418
SinI	GGWCC	2 cut(s)	2043, 2304
SmiMI	CAYNNNNRTG	4 cut(s)	228, 1257, 1700, 1964
SmlI	CTYRAG	1 cut(s)	1727
SmoI	CTYRAG	1 cut(s)	1727
SphI	GCATGC	1 cut(s)	1118
Sse9I	AATT	9 cut(s)	58, 561, 789, 1150, 1369, 1502, 1513, 1993, 2009
SseBI	AGGCCT	2 cut(s)	2455, 2556
SsiI	CCGC	8 cut(s)	817, 1171, 1632, 1916, 2233, 2415, 2417, 2490
SspI	AATATT	3 cut(s)	612, 756, 1316
SspMI	CTAG	6 cut(s)	350, 1076, 1164, 1223, 2186, 2405
StuI	AGGCCT	2 cut(s)	2455, 2556
StyD4I	CCNGG	7 cut(s)	333, 460, 648, 661, 883, 1284, 2344
StyI	CCWWGG	3 cut(s)	796, 2039, 2149
TaaI	ACNGT	9 cut(s)	74, 277, 506, 1667, 1688, 1928, 2312, 2327, 2481
TaiI	ACGT	5 cut(s)	28, 315, 2113, 2198, 2536
TaqI	TCGA	8 cut(s)	44, 426, 625, 1500, 1659, 2031, 2170, 2265
TaqII	GACCGA	1 cut(s)	2060
TasI	AATT	9 cut(s)	58, 561, 789, 1150, 1369, 1502, 1513, 1993, 2009
TatI	WGTACW	7 cut(s)	259, 540, 1054, 1476, 1524, 2223, 2352
TauI	GCSGC	1 cut(s)	1173
TfiI	GAWTC	6 cut(s)	173, 179, 451, 989, 1355, 1585
Tru1I	TTAA	5 cut(s)	48, 696, 840, 1194, 1728
Tru9I	TTAA	5 cut(s)	48, 696, 840, 1194, 1728
TscAI	CASTG	6 cut(s)	205, 640, 687, 1281, 1707, 2306
TseFI	GTSAC	3 cut(s)	414, 1144, 1462
TseI	GCWGC	4 cut(s)	674, 976, 1167, 2504
Tsp45I	GTSAC	3 cut(s)	414, 1144, 1462
TspGWI	ACGGA	4 cut(s)	206, 1028, 1389, 1943
TspRI	CASTG	6 cut(s)	205, 640, 687, 1281, 1707, 2306
Tth111I	GACNNNGTC	1 cut(s)	2252
Van91I	CCANNNNNTGG	2 cut(s)	461, 902
Vha464I	CTTAAG	1 cut(s)	1727
VneI	GTGCAC	1 cut(s)	1250
VpaK11BI	GGWCC	2 cut(s)	2043, 2304
XapI	RAATTY	4 cut(s)	58, 1150, 1502, 2009
XbaI	TCTAGA	1 cut(s)	2185
XceI	RCATGY	4 cut(s)	998, 1118, 1294, 1882
XmiI	GTMKAC	4 cut(s)	309, 426, 1690, 1923
XmnI	GAANNNNTTC	1 cut(s)	756
XspI	CTAG	6 cut(s)	350, 1076, 1164, 1223, 2186, 2405
ZrmI	AGTACT	1 cut(s)	1526
Zsp2I	ATGCAT	1 cut(s)	1264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.