Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005666

Physical Location & Seq

Genomic Coordinates Forward (+)

14064824 .. 14077727

Gene Structure 12904 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G115400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGGTCTCGACTCTCTCGGGGATTCGCTTCCCGCTTCTACCTTCGGCCTACAACAACAACAACGACTCTGCTTCCTTGCATTCCAGCTTCAATGGCTATCGGAGGACCTCCAGCCTCTCTCTCTTCCTCACCAACAGCTCCTTCTCTCGGAAGATCTTTGCTGGAAAGTCTTCGTATGATTCTGATTCGTCTTTAACGGTTGCTGCATCAAAGAAAGTTCTTGTTCCTGATAGCCAGAGTGATGGCTCTTCATCTGTGACAGAGCAATTGGAAGCTCCCGGCACAGTTTCAGAGGATCCTCAGGTGCTTGAGGATGTAGATAATGTTGCAATGGAAGATGATAAGAAGGTTGAGGATGAAGTGAAGAAAAGTGATGTTCCTTCATTAGATGCAGGCAATGTCGATGGCACTGAAGCCAAGGGTGAGGAAACACCTCATCCCTTAGACGGGACAGTAAGTACTGCTAAAAAGAATGCCACACAAAAGTCAATTCCACCACCTGGAAATGGGAAAAAGATATATGAAATAGATCCACTTTTGGTGGGTTTCCGTGATCATCTTGATTACCGTTATGGACAATACAAAAGGCTGCGTGAGGAGATTGACAAGTATGAAGGTGGCTTGGAGGTGTTTTCCCGTGGCTATGAGAAGTTTGGGTTCACACGCAGTGCTGAGGGTATCACTTATAGGGAGTGGGCACCTGGAGCTAAGTCAGCATCATTGATTGGAGATTTCAACAATTGGAATACGAATGCAGATGTTATGACTCGGAATGAGTTTGGAGTCTGGGAGATATTTTTGCCAAACAATGCAGATGGCTCACCTCCGATTCCGCATGGTTCTCGAGTGAAGATCCGTATGGATACTCCTTCAGGCATTAAGGACTCCATTCCTGCTTGGATCAAGTTTTCTGTACAGGCTCCAGGTGAAATCCCATACAATGGCATATACTACGATCCACCAGAAGAGGAAAATTATGTATTTCAACATTCTCAGCCAAAGAGACCAAAATCACTTCGCATTTATGAGGCACATGTTGGAATGAGTAGCACGGAGCCCAAAATCAACACATATGCTGAATTTAGAGATGATGTGCTACCACGCATTAAAAGGCTTGGTTATAATGCTGTTCAGCTCATGGCTATTCAAGAGCACTCCTACTATGCTAGCTTTGGGTACCATGTCACCAATTTTTTTGCACCTAGCAGTCGCTGTGGAACCCCTGACGATCTGAAGTCTCTAATAGATAGAGCTCATGAGCTTGGTATTCTTGTACTCATGGATATTGTTCACAGCCATGCATCAAATAACGTGTTGGATGGGTTGAACATGTTTGATGGAACCGATAGTCATTACTTCCACTCTGGGTCCCGGGGATATCATTGGATGTGGGATTCCCGCTTGTTTAACTATGGAAGCTGGGAGGTTTTGAGGTATCTTCTTTCCAATGCAAGATGGTGGCTAGAAGAATACAAGTTCGATGGGTTCAGATTTGATGGTGTCACTTCAATGATGTACACGCACCATGGATTGGAGGTGGCATTTACTGGGAATTACAATGAGTACTTTGGATTAGCAACAGATGTAGATGCTGTGACTTACTTGATGCTGGTTAACGATTTGATTCACGGGCTCTACCCTGAAGCTGTTACCATTGGTGAAGATGTTAGTGGAATGCCAACATTCTGTGTTTCTGTACAAGATGGTGGTGTTGGATTTGATTATCGCCTGCATATGGCTATTGCTGATAAATGGATTGAGCTCCTCCAGAAAATAGATGAAGAGTGGCAAATGGGTGATATCGTTCACACACTCACCAACAGAAGGTGGCGGGAAAAGTGTGTTGCTTATGCTGAAAGTCATGACCAAGCTCTTGTTGGTGACAAAACAATTGCGTTCTGGTTGATGGACAAGGATATGTATGATTTCATGGCTCTGGACAGGCCAGCTACTCCCCTTGTAGATCGTGGAATAGCATTACATAAAATGATTAGGCTTATTACTATGGGATTGGGCGGAGAAGGATATCTGAACTTCATGGGGAATGAATTTGGACATCCTGAGTGGATTGATTTTCCAAGAGGTACTCAACAGCTTCCAAATGGAAAAATAGTTCCTGGGAACAATAACAGTTTTGACAAATGCCGACGTAGATTTGATCTTGGGGATGCAAATTATCTAAGATATCATGGGCTGCAAGAATTTGATCAAGCAATGCAGCATCTTGAAGAAACCTATTGTTTCATGACTTCTGAGCACCAATATATATCACGGAAGGATGAAGGAGATAGGGTTATTGTCTTTGAAAGGGGAAACCTGGTGTTTGTCTTCAATTTTCATTGGAGTAAAAGCTATACAGACTACCGAGTTGGCTGCTTAAAGCCAGGGAAGTATAAGATTGTCTTGGATTCAGATGAAAAATTATTTGGAGGCTTCAATAGGATTGATCACAGTGCTGAGTACTTCACCACTGACGGGTGGTTTGATGACCGGCCTCATTCTTTCCTGCTATATGCACCTTGTAGAACAGCTGTGGTCTACGCTCTCATAGCGGGACCTGCTAAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001678 GO:0003674 GO:0003824 GO:0003844 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009501 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009987 GO:0010021 GO:0010033 GO:0016740 GO:0016757 GO:0016758 GO:0019725 GO:0033500 GO:0034284 GO:0034285 GO:0042221 GO:0042592 GO:0042593 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0051716 GO:0055082 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071310 GO:0071322 GO:0071324 GO:0071326 GO:0071329 GO:0071331 GO:0071332 GO:0071333 GO:0071478 GO:0071482 GO:0071704 GO:0104004 GO:1901135 GO:1901137 GO:1901576 GO:1901700 GO:1901701 GO:2000896

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Alpha-amylase Alpha-amylase_C CBM_48

Protein Analysis

857

Amino Acids

97.15

Weight (kDa)

5.31

Isoelectric Point (pI)

32.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36390 AT5G03650
fragaria_vesca	FvH4_6g18120 FvH4_6g18120 FvH4_6g18120 FvH4_6g18120 FvH4_6g18120
malus_domestica	MD12G1020600.v1.1 MD14G1017700.v1.1
prunus_persica	Prupe.7G115400_v2.0.a1 Prupe.7G115400_v2.0.a1
pyrus_communis	pycom12g01930 pycom14g01610
rosa_chinensis	RchiOBHm_Chr3g0472421
rosa_laevigata	RLG00000024081
rosa_multiflora	Rmu_co8370739.1_g000001 Rmu_sc0001096.1_g000015
rosa_roxburghii	Rroxscaffold_6G00408930
rosa_rugosa	Rorug03G0124700 Rorug03G0124700 Rorug03G0124800 Rorug03G0124900
rosa_samantha	Rh3AG177100 Rh3BG203100 Rh3CG193400 Rh3CG200600 Rh3DG172000
rosa_wichuraiana	Rw3G016440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1122
Acc36I	ACCTGC	1 cut(s)	2566
Acc65I	GGTACC	1 cut(s)	1176
AccB1I	GGYRCC	2 cut(s)	697, 1176
AccB7I	CCANNNNNTGG	3 cut(s)	500, 941, 1531
AccI	GTMKAC	1 cut(s)	2538
AciI	CCGC	6 cut(s)	32, 833, 1399, 1831, 2016, 2552
AclWI	GGATC	6 cut(s)	290, 303, 524, 847, 908, 950
AcsI	RAATTY	3 cut(s)	1079, 2048, 2201
AcuI	CTGAAG	4 cut(s)	432, 855, 1253, 1662
AdeI	CACNNNGTG	1 cut(s)	668
AfaI	GTAC	9 cut(s)	460, 915, 1178, 1275, 1517, 1565, 1698, 2086, 2462
AflIII	ACRYGT	3 cut(s)	1033, 1311, 1329
AjnI	CCWGG	6 cut(s)	499, 700, 922, 2116, 2316, 2383
AjuI	GAANNNNNNNTTGG	4 cut(s)	125, 157, 2409, 2441
AloI	GAACNNNNNNTCC	2 cut(s)	2097, 2129
Alw21I	GWGCWC	4 cut(s)	1155, 1255, 1764, 2259
Alw26I	GTCTC	3 cut(s)	10, 997, 1242
AlwI	GGATC	6 cut(s)	290, 303, 524, 847, 908, 950
AlwNI	CAGNNNCTG	1 cut(s)	1212
Ama87I	CYCGRG	3 cut(s)	16, 843, 1371
AoxI	GGCC	3 cut(s)	45, 1943, 2492
ApeKI	GCWGC	5 cut(s)	203, 589, 2194, 2218, 2373
ApoI	RAATTY	3 cut(s)	1079, 2048, 2201
ArsI	GACNNNNNNTTYG	2 cut(s)	2465, 2497
Asp700I	GAANNNNTTC	1 cut(s)	169
Asp718I	GGTACC	1 cut(s)	1176
AspS9I	GGNCC	3 cut(s)	105, 1368, 2555
AsuC2I	CCSGG	3 cut(s)	279, 1372, 1373
AsuNHI	GCTAGC	1 cut(s)	1166
AvaI	CYCGRG	3 cut(s)	16, 843, 1371
AvaII	GGWCC	3 cut(s)	105, 1368, 2555
AxyI	CCTNAGG	1 cut(s)	300
BaeGI	GKGCMC	1 cut(s)	700
BamHI	GGATCC	1 cut(s)	295
BanI	GGYRCC	2 cut(s)	697, 1176
BanII	GRGCYC	4 cut(s)	1059, 1255, 1635, 1764
BbsI	GAAGAC	2 cut(s)	162, 2320
Bbv12I	GWGCWC	4 cut(s)	1155, 1255, 1764, 2259
BbvCI	CCTCAGC	1 cut(s)	672
BbvI	GCAGC	5 cut(s)	190, 576, 2181, 2230, 2360
BcgI	CGANNNNNNTGC	4 cut(s)	824, 858, 2355, 2389
BciT130I	CCWGG	6 cut(s)	501, 702, 924, 2118, 2318, 2385
BciVI	GTATCC	1 cut(s)	856
BclI	TGATCA	3 cut(s)	553, 2206, 2446
BcnI	CCSGG	3 cut(s)	279, 1372, 1373
BcoDI	GTCTC	3 cut(s)	10, 997, 1242
BfaI	CTAG	3 cut(s)	1167, 1203, 1463
BfuAI	ACCTGC	1 cut(s)	2566
BfuI	GTATCC	1 cut(s)	856
BglII	AGATCT	1 cut(s)	153
BisI	GCNGC	5 cut(s)	204, 590, 2195, 2219, 2374
BlsI	GCNGC	5 cut(s)	205, 591, 2196, 2220, 2375
BmcAI	AGTACT	3 cut(s)	460, 1565, 2462
Bme1390I	CCNGG	9 cut(s)	279, 501, 702, 924, 1372, 1373, 2118, 2318, 2385
Bme18I	GGWCC	3 cut(s)	105, 1368, 2555
BmeT110I	CYCGRG	3 cut(s)	16, 843, 1371
BmgT120I	GGNCC	3 cut(s)	105, 1368, 2555
BmrFI	CCNGG	9 cut(s)	279, 501, 702, 924, 1372, 1373, 2118, 2318, 2385
BmrI	ACTGGG	1 cut(s)	1557
BmsI	GCATC	8 cut(s)	215, 379, 725, 1310, 1579, 1596, 2158, 2230
BmtI	GCTAGC	1 cut(s)	1170
BmuI	ACTGGG	1 cut(s)	1557
BpiI	GAAGAC	2 cut(s)	162, 2320
BpmI	CTGGAG	4 cut(s)	94, 723, 906, 1751
Bpu10I	CCTNAGC	1 cut(s)	672
BpuEI	CTTGAG	1 cut(s)	329
BpuMI	CCSGG	3 cut(s)	279, 1372, 1373
BsaI	GGTCTC	2 cut(s)	10, 997
BsaJI	CCNNGG	7 cut(s)	417, 637, 1371, 1372, 1525, 2117, 2384
BsaXI	ACNNNNNCTCC	2 cut(s)	2277, 2307
Bse118I	RCCGGY	1 cut(s)	2490
Bse1I	ACTGG	1 cut(s)	1552
Bse21I	CCTNAGG	1 cut(s)	300
Bse3DI	GCAATG	3 cut(s)	336, 403, 2220
BseBI	CCWGG	6 cut(s)	501, 702, 924, 2118, 2318, 2385
BseDI	CCNNGG	7 cut(s)	417, 637, 1371, 1372, 1525, 2117, 2384
BseGI	GGATG	8 cut(s)	319, 361, 436, 1324, 1392, 2056, 2173, 2284
BseMI	GCAATG	3 cut(s)	336, 403, 2220
BseMII	CTCAG	6 cut(s)	314, 663, 1007, 2052, 2244, 2448
BseNI	ACTGG	1 cut(s)	1552
BseRI	GAGGAG	2 cut(s)	611, 1754
BseSI	GKGCMC	1 cut(s)	700
BseXI	GCAGC	5 cut(s)	190, 576, 2181, 2230, 2360
BseYI	CCCAGC	1 cut(s)	1419
BshFI	GGCC	3 cut(s)	47, 1945, 2494
BshNI	GGYRCC	2 cut(s)	697, 1176
BsiHKAI	GWGCWC	4 cut(s)	1155, 1255, 1764, 2259
BsiHKCI	CYCGRG	3 cut(s)	16, 843, 1371
BsiSI	CCGG	3 cut(s)	279, 1372, 2491
BslFI	GGGAC	2 cut(s)	463, 1354
BsmAI	GTCTC	3 cut(s)	10, 997, 1242
BsmFI	GGGAC	2 cut(s)	463, 1354
BsmI	GAATGC	4 cut(s)	79, 478, 757, 1680
BsnI	GGCC	3 cut(s)	47, 1945, 2494
Bso31I	GGTCTC	2 cut(s)	10, 997
BsoBI	CYCGRG	3 cut(s)	16, 843, 1371
Bsp1286I	GDGCHC	7 cut(s)	700, 1059, 1155, 1255, 1635, 1764, 2259
Bsp1407I	TGTACA	3 cut(s)	913, 1515, 1696
Bsp19I	CCATGG	1 cut(s)	1525
BspACI	CCGC	6 cut(s)	32, 833, 1399, 1831, 2016, 2552
BspANI	GGCC	3 cut(s)	47, 1945, 2494
BspCNI	CTCAG	6 cut(s)	313, 664, 1006, 2053, 2245, 2449
BspHI	TCATGA	3 cut(s)	1255, 1861, 2244
BspMI	ACCTGC	1 cut(s)	2566
BspOI	GCTAGC	1 cut(s)	1170
BspPI	GGATC	6 cut(s)	290, 303, 524, 847, 908, 950
BspQI	GCTCTTC	1 cut(s)	253
BspT107I	GGYRCC	2 cut(s)	697, 1176
BspTNI	GGTCTC	2 cut(s)	10, 997
BsrDI	GCAATG	3 cut(s)	336, 403, 2220
BsrFI	RCCGGY	1 cut(s)	2490
BsrGI	TGTACA	3 cut(s)	913, 1515, 1696
BsrI	ACTGG	1 cut(s)	1552
BssAI	RCCGGY	1 cut(s)	2490
BssECI	CCNNGG	7 cut(s)	417, 637, 1371, 1372, 1525, 2117, 2384
BssT1I	CCWWGG	2 cut(s)	417, 1525
Bst2UI	CCWGG	6 cut(s)	501, 702, 924, 2118, 2318, 2385
Bst4CI	ACNGT	6 cut(s)	199, 286, 454, 569, 2132, 2453
Bst6I	CTCTTC	4 cut(s)	128, 253, 960, 1776
BstAUI	TGTACA	3 cut(s)	913, 1515, 1696
BstC8I	GCNNGC	4 cut(s)	394, 1168, 1730, 1947
BstDEI	CTNAG	9 cut(s)	300, 442, 672, 708, 993, 2061, 2180, 2253, 2457
BstDSI	CCRYGG	2 cut(s)	637, 1525
BstF5I	GGATG	8 cut(s)	319, 361, 436, 1324, 1392, 2056, 2173, 2284
BstMAI	GTCTC	3 cut(s)	10, 997, 1242
BstMWI	GCNNNNNNNGC	5 cut(s)	93, 704, 713, 2549, 2558
BstNI	CCWGG	6 cut(s)	501, 702, 924, 2118, 2318, 2385
BstNSI	RCATGY	2 cut(s)	1037, 1333
BstSCI	CCNGG	9 cut(s)	277, 499, 700, 922, 1370, 1371, 2116, 2316, 2383
BstSLI	GKGCMC	1 cut(s)	700
BstV1I	GCAGC	5 cut(s)	190, 576, 2181, 2230, 2360
BstV2I	GAAGAC	2 cut(s)	162, 2320
BstX2I	RGATCY	4 cut(s)	153, 295, 529, 852
BstXI	CCANNNNNNTGG	1 cut(s)	242
BstYI	RGATCY	4 cut(s)	153, 295, 529, 852
Bsu36I	CCTNAGG	1 cut(s)	300
BsuI	GTATCC	1 cut(s)	856
BsuRI	GGCC	3 cut(s)	47, 1945, 2494
BtgI	CCRYGG	2 cut(s)	637, 1525
BtsCI	GGATG	8 cut(s)	319, 361, 436, 1324, 1392, 2056, 2173, 2284
BtsI	GCAGTG	1 cut(s)	673
BtsIMutI	CAGTG	4 cut(s)	408, 673, 2458, 2469
BveI	ACCTGC	1 cut(s)	2566
Cac8I	GCNNGC	4 cut(s)	394, 1168, 1730, 1947
CaiI	CAGNNNCTG	1 cut(s)	1212
CciI	TCATGA	3 cut(s)	1255, 1861, 2244
Cfr10I	RCCGGY	1 cut(s)	2490
Cfr13I	GGNCC	3 cut(s)	105, 1368, 2555
Cfr9I	CCCGGG	1 cut(s)	1371
CsiI	ACCWGGT	1 cut(s)	2316
Csp6I	GTAC	9 cut(s)	459, 914, 1177, 1274, 1516, 1564, 1697, 2085, 2461
CviQI	GTAC	9 cut(s)	459, 914, 1177, 1274, 1516, 1564, 1697, 2085, 2461
DdeI	CTNAG	9 cut(s)	300, 442, 672, 708, 993, 2061, 2180, 2253, 2457
DraIII	CACNNNGTG	1 cut(s)	668
Eam1104I	CTCTTC	4 cut(s)	128, 253, 960, 1776
EarI	CTCTTC	4 cut(s)	128, 253, 960, 1776
EciI	GGCGGA	1 cut(s)	2031
Ecl136II	GAGCTC	2 cut(s)	1253, 1762
Eco130I	CCWWGG	2 cut(s)	417, 1525
Eco24I	GRGCYC	4 cut(s)	1059, 1255, 1635, 1764
Eco31I	GGTCTC	2 cut(s)	10, 997
Eco32I	GATATC	4 cut(s)	1379, 1801, 2027, 2186
Eco47I	GGWCC	3 cut(s)	105, 1368, 2555
Eco53kI	GAGCTC	2 cut(s)	1253, 1762
Eco57I	CTGAAG	4 cut(s)	432, 855, 1253, 1662
Eco81I	CCTNAGG	1 cut(s)	300
Eco88I	CYCGRG	3 cut(s)	16, 843, 1371
EcoICRI	GAGCTC	2 cut(s)	1253, 1762
EcoO109I	RGGNCCY	3 cut(s)	105, 1368, 2555
EcoRII	CCWGG	6 cut(s)	499, 700, 922, 2116, 2316, 2383
EcoRV	GATATC	4 cut(s)	1379, 1801, 2027, 2186
EcoT14I	CCWWGG	2 cut(s)	417, 1525
EcoT22I	ATGCAT	1 cut(s)	1303
EcoT38I	GRGCYC	4 cut(s)	1059, 1255, 1635, 1764
ErhI	CCWWGG	2 cut(s)	417, 1525
FalI	AAGNNNNNCTT	2 cut(s)	2387, 2419
FaqI	GGGAC	2 cut(s)	463, 1354
FauI	CCCGC	4 cut(s)	39, 1406, 1824, 2545
FauNDI	CATATG	2 cut(s)	1072, 1734
FbaI	TGATCA	3 cut(s)	553, 2206, 2446
FblI	GTMKAC	1 cut(s)	2538
Fnu4HI	GCNGC	5 cut(s)	204, 590, 2195, 2219, 2374
FokI	GGATG	8 cut(s)	326, 368, 423, 1331, 1399, 2043, 2180, 2291
FriOI	GRGCYC	4 cut(s)	1059, 1255, 1635, 1764
Fsp4HI	GCNGC	5 cut(s)	204, 590, 2195, 2219, 2374
FspBI	CTAG	3 cut(s)	1167, 1203, 1463
GluI	GCNGC	5 cut(s)	204, 590, 2195, 2219, 2374
GsaI	CCCAGC	1 cut(s)	1423
GsuI	CTGGAG	4 cut(s)	94, 723, 906, 1751
HaeIII	GGCC	3 cut(s)	47, 1945, 2494
HapII	CCGG	3 cut(s)	279, 1372, 2491
HincII	GTYRAC	1 cut(s)	1615
HindII	GTYRAC	1 cut(s)	1615
HpaI	GTTAAC	1 cut(s)	1615
HpaII	CCGG	3 cut(s)	279, 1372, 2491
Hpy166II	GTNNAC	6 cut(s)	660, 1291, 1518, 1615, 1807, 2539
Hpy8I	GTNNAC	6 cut(s)	660, 1291, 1518, 1615, 1807, 2539
Hpy99I	CGWCG	1 cut(s)	2151
HpyCH4III	ACNGT	6 cut(s)	199, 286, 454, 569, 2132, 2453
HpyCH4IV	ACGT	2 cut(s)	1311, 2149
HpyF10VI	GCNNNNNNNGC	5 cut(s)	93, 704, 713, 2549, 2558
HpyF3I	CTNAG	9 cut(s)	300, 442, 672, 708, 993, 2061, 2180, 2253, 2457
HpySE526I	ACGT	2 cut(s)	1311, 2149
KflI	GGGWCCC	1 cut(s)	1368
KpnI	GGTACC	1 cut(s)	1180
Ksp22I	TGATCA	3 cut(s)	553, 2206, 2446
KspAI	GTTAAC	1 cut(s)	1615
LguI	GCTCTTC	1 cut(s)	253
LmnI	GCTCC	6 cut(s)	143, 280, 704, 925, 1054, 1767
Lsp1109I	GCAGC	5 cut(s)	190, 576, 2181, 2230, 2360
LweI	GCATC	8 cut(s)	215, 379, 725, 1310, 1579, 1596, 2158, 2230
MabI	ACCWGGT	1 cut(s)	2316
MaeI	CTAG	3 cut(s)	1167, 1203, 1463
MaeII	ACGT	2 cut(s)	1311, 2149
MaeIII	GTNAC	6 cut(s)	256, 1183, 1501, 1594, 1648, 1880
MfeI	CAATTG	3 cut(s)	266, 739, 1890
MflI	RGATCY	4 cut(s)	153, 295, 529, 852
MhlI	GDGCHC	7 cut(s)	700, 1059, 1155, 1255, 1635, 1764, 2259
MlyI	GAGTC	5 cut(s)	4, 59, 760, 792, 878
MmeI	TCCRAC	3 cut(s)	1018, 1296, 1693
Mph1103I	ATGCAT	1 cut(s)	1303
MroXI	GAANNNNTTC	1 cut(s)	169
MseI	TTAA	6 cut(s)	194, 879, 1107, 1407, 1614, 2378
MslI	CAYNNNNRTG	2 cut(s)	1296, 1508
MspA1I	CMGCKG	1 cut(s)	2531
MspI	CCGG	3 cut(s)	279, 1372, 2491
MspR9I	CCNGG	9 cut(s)	279, 501, 702, 924, 1372, 1373, 2118, 2318, 2385
MunI	CAATTG	3 cut(s)	266, 739, 1890
Mva1269I	GAATGC	4 cut(s)	79, 478, 757, 1680
MvaI	CCWGG	6 cut(s)	501, 702, 924, 2118, 2318, 2385
MwoI	GCNNNNNNNGC	5 cut(s)	93, 704, 713, 2549, 2558
NciI	CCSGG	3 cut(s)	279, 1372, 1373
NcoI	CCATGG	1 cut(s)	1525
NdeI	CATATG	2 cut(s)	1072, 1734
NheI	GCTAGC	1 cut(s)	1166
NmuCI	GTSAC	5 cut(s)	256, 1183, 1501, 1594, 1880
NsiI	ATGCAT	1 cut(s)	1303
NspI	RCATGY	2 cut(s)	1037, 1333
PaeR7I	CTCGAG	1 cut(s)	843
PagI	TCATGA	3 cut(s)	1255, 1861, 2244
PciI	ACATGT	2 cut(s)	1033, 1329
PciSI	GCTCTTC	1 cut(s)	253
PctI	GAATGC	4 cut(s)	79, 478, 757, 1680
PdmI	GAANNNNTTC	1 cut(s)	169
PfeI	GAWTC	7 cut(s)	22, 179, 185, 829, 1394, 1624, 2408
PflMI	CCANNNNNTGG	3 cut(s)	500, 941, 1531
PkrI	GCNGC	5 cut(s)	205, 591, 2196, 2220, 2375
PleI	GAGTC	5 cut(s)	4, 59, 760, 791, 878
PpsI	GAGTC	5 cut(s)	4, 59, 760, 791, 878
PpuMI	RGGWCCY	3 cut(s)	105, 1368, 2555
PscI	ACATGT	2 cut(s)	1033, 1329
PsiI	TTATAA	1 cut(s)	1122
Psp124BI	GAGCTC	2 cut(s)	1255, 1764
Psp5II	RGGWCCY	3 cut(s)	105, 1368, 2555
Psp6I	CCWGG	6 cut(s)	499, 700, 922, 2116, 2316, 2383
PspFI	CCCAGC	1 cut(s)	1419
PspGI	CCWGG	6 cut(s)	499, 700, 922, 2116, 2316, 2383
PspPI	GGNCC	3 cut(s)	105, 1368, 2555
PspPPI	RGGWCCY	3 cut(s)	105, 1368, 2555
PstNI	CAGNNNCTG	1 cut(s)	1212
PsuI	RGATCY	4 cut(s)	153, 295, 529, 852
PvuII	CAGCTG	1 cut(s)	2531
RsaI	GTAC	9 cut(s)	460, 915, 1178, 1275, 1517, 1565, 1698, 2086, 2462
RsaNI	GTAC	9 cut(s)	459, 914, 1177, 1274, 1516, 1564, 1697, 2085, 2461
RseI	CAYNNNNRTG	2 cut(s)	1296, 1508
SacI	GAGCTC	2 cut(s)	1255, 1764
SapI	GCTCTTC	1 cut(s)	253
SaqAI	TTAA	6 cut(s)	194, 879, 1107, 1407, 1614, 2378
SatI	GCNGC	5 cut(s)	204, 590, 2195, 2219, 2374
Sau96I	GGNCC	3 cut(s)	105, 1368, 2555
ScaI	AGTACT	3 cut(s)	460, 1565, 2462
SchI	GAGTC	5 cut(s)	4, 59, 760, 792, 878
ScrFI	CCNGG	9 cut(s)	279, 501, 702, 924, 1372, 1373, 2118, 2318, 2385
SduI	GDGCHC	7 cut(s)	700, 1059, 1155, 1255, 1635, 1764, 2259
SexAI	ACCWGGT	1 cut(s)	2316
SfaNI	GCATC	8 cut(s)	215, 379, 725, 1310, 1579, 1596, 2158, 2230
Sfr274I	CTCGAG	1 cut(s)	843
SinI	GGWCC	3 cut(s)	105, 1368, 2555
SlaI	CTCGAG	1 cut(s)	843
SmaI	CCCGGG	1 cut(s)	1373
SmiMI	CAYNNNNRTG	2 cut(s)	1296, 1508
SmlI	CTYRAG	2 cut(s)	308, 843
SmoI	CTYRAG	2 cut(s)	308, 843
SsiI	CCGC	6 cut(s)	32, 833, 1399, 1831, 2016, 2552
SspMI	CTAG	3 cut(s)	1167, 1203, 1463
SstI	GAGCTC	2 cut(s)	1255, 1764
StyD4I	CCNGG	9 cut(s)	277, 499, 700, 922, 1370, 1371, 2116, 2316, 2383
StyI	CCWWGG	2 cut(s)	417, 1525
TaaI	ACNGT	6 cut(s)	199, 286, 454, 569, 2132, 2453
TaiI	ACGT	2 cut(s)	1314, 2152
TaqI	TCGA	4 cut(s)	8, 402, 844, 1479
TatI	WGTACW	7 cut(s)	458, 913, 1273, 1515, 1563, 1696, 2460
TfiI	GAWTC	7 cut(s)	22, 179, 185, 829, 1394, 1624, 2408
Tru1I	TTAA	6 cut(s)	194, 879, 1107, 1407, 1614, 2378
Tru9I	TTAA	6 cut(s)	194, 879, 1107, 1407, 1614, 2378
TscAI	CASTG	4 cut(s)	415, 673, 2458, 2476
TseFI	GTSAC	5 cut(s)	256, 1183, 1501, 1594, 1880
TseI	GCWGC	5 cut(s)	203, 589, 2194, 2218, 2373
Tsp45I	GTSAC	5 cut(s)	256, 1183, 1501, 1594, 1880
TspGWI	ACGGA	4 cut(s)	539, 845, 1067, 2287
TspMI	CCCGGG	1 cut(s)	1371
TspRI	CASTG	4 cut(s)	415, 673, 2458, 2476
Van91I	CCANNNNNTGG	3 cut(s)	500, 941, 1531
VpaK11BI	GGWCC	3 cut(s)	105, 1368, 2555
XapI	RAATTY	3 cut(s)	1079, 2048, 2201
XceI	RCATGY	2 cut(s)	1037, 1333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1874
XhoI	CTCGAG	1 cut(s)	843
XmaI	CCCGGG	1 cut(s)	1371
XmiI	GTMKAC	1 cut(s)	2538
XmnI	GAANNNNTTC	1 cut(s)	169
XspI	CTAG	3 cut(s)	1167, 1203, 1463
ZrmI	AGTACT	3 cut(s)	460, 1565, 2462
Zsp2I	ATGCAT	1 cut(s)	1303

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.