AT2G37790

Aldo-keto reductase family 4 member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0014906
Physical Location & Seq
Forward (+)
15838692 .. 15840945
2254 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G37790.1

Sequence Viewer

Length: 945 bp
ATGGCAGAGGAAATTAGATTCTTTGAACTCAACACCGGAGCGAAGATACCATCCGTCGGTCTAGGAACGTGGCAGGCCGATCCTGGTCTCGTCGGAAACGCTGTCGACGCTGCTGTGAAGATTGGTTATCGTCACATTGATTGTGCTCAAATCTATGGCAATGAAAAAGAGATTGGGTTAGTCCTGAAGAAATTGTTTGATGGTGGAGTTGTTAAGCGTGAGGAAATGTTCATCACATCCAAACTATGGTGTACTTATCATGATCCTCAAGAAGTGCCTGAGGCACTTAATAGAACTCTACAGGATCTGCAGCTTGACTACGTCGATCTGTATCTCATTCACTGGCCTGTTAGCCTCAAGAAAGGATCTACTGGCTTTAAACCAGAGAACATTTTGCCAACTGATATTCCTAGCACATGGAAAGCAATGGAATCACTCTTTGATTCAGGCAAGGCCCGTGCTATTGGTGTAAGTAATTTCTCCTCAAAGAAACTCGCAGATCTCTTGGTGGTGGCTCGTGTTCCTCCCGCTGTTAACCAGGTGGAGTGTCACCCTTCATGGCAACAAAACGTGCTCAGGGATTTCTGCAAATCTAAAGGCGTTCATCTCTCAGGGTACTCTCCTTTGGGTTCTCCAGGAACAACGTGGCTAACGAGCGATGTTTTGAAGAACCCTATTCTTGGTGGTGTTGCTGAGAAGCTCGGCAAGACTCCTGCACAGGTTGCATTACGCTGGGGTCTCCAAATGGGTCAAAGTGTTCTTCCAAAAAGCACCCATGAAGACAGGATCAAACAGAATTTCGATGTTTTCAACTGGTCCATACCCGAAGACATGTTATCCAAGTTTTCTGAGATTGGACAGGGTAGGTTGGTGCGAGGCATGTCATTTGTTCATGAGACGAGTCCATATAAGAGTCTTGAAGAACTCTGGGACGGTGAGATATGA

Protein Analysis

314

Amino Acids

34.91

Weight (kDa)

6.19

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 19 - 285 3.2e-53 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014906)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37770 AT2G37790 AT3G53880 AT3G53880
fragaria_vesca FvH4_6g13012 FvH4_6g13012
malus_domestica MD12G1150400.v1.1
prunus_persica Prupe.6G262000_v2.0.a1
pyrus_communis pycom12g14420
rosa_chinensis RchiOBHm_Chr3g0465141
rosa_multiflora Rmu_sc0003386.1_g000011
rosa_roxburghii Rroxscaffold_6G00415210
rosa_rugosa Rorug03G0075700
rosa_samantha Rh3BG139400 Rh3DG140700
rosa_wichuraiana Rw3G011410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 246
AccI GTMKAC 1 cut(s) 105
AciI CCGC 1 cut(s) 528
AclWI GGATC 5 cut(s) 74, 257, 312, 373, 794
AcsI RAATTY 1 cut(s) 796
AcuI CTGAAG 1 cut(s) 206
AfaI GTAC 2 cut(s) 253, 617
AfiI CCNNNNNNNGG 3 cut(s) 56, 246, 680
AflIII ACRYGT 1 cut(s) 831
AgsI TTSAA 4 cut(s) 26, 667, 811, 920
AjnI CCWGG 3 cut(s) 82, 537, 634
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
AluBI AGCT 2 cut(s) 313, 700
AluI AGCT 2 cut(s) 313, 700
Alw21I GWGCWC 2 cut(s) 148, 576
Alw26I GTCTC 3 cut(s) 92, 743, 890
AlwI GGATC 5 cut(s) 74, 257, 312, 373, 794
AlwNI CAGNNNCTG 1 cut(s) 307
AoxI GGCC 3 cut(s) 75, 344, 453
ApeKI GCWGC 2 cut(s) 110, 310
ApoI RAATTY 1 cut(s) 796
AspS9I GGNCC 2 cut(s) 454, 816
AsuHPI GGTGA 1 cut(s) 542
AvaII GGWCC 1 cut(s) 816
AxyI CCTNAGG 1 cut(s) 279
BauI CACGAG 1 cut(s) 516
BbsI GAAGAC 2 cut(s) 786, 834
Bbv12I GWGCWC 2 cut(s) 148, 576
BbvI GCAGC 2 cut(s) 97, 322
BccI CCATC 2 cut(s) 58, 194
BciT130I CCWGG 3 cut(s) 84, 539, 636
BcoDI GTCTC 3 cut(s) 92, 743, 890
BfaI CTAG 2 cut(s) 62, 411
BfmI CTRYAG 2 cut(s) 299, 308
BglII AGATCT 1 cut(s) 499
BisI GCNGC 2 cut(s) 111, 311
BlsI GCNGC 2 cut(s) 112, 312
Bme1390I CCNGG 3 cut(s) 84, 539, 636
Bme18I GGWCC 1 cut(s) 816
BmgT120I GGNCC 2 cut(s) 454, 816
BmrFI CCNGG 3 cut(s) 84, 539, 636
BpiI GAAGAC 2 cut(s) 786, 834
BpmI CTGGAG 1 cut(s) 618
Bpu10I CCTNAGC 1 cut(s) 575
BpuEI CTTGAG 2 cut(s) 252, 341
BsaBI GATNNNNATC 1 cut(s) 330
BsaI GGTCTC 2 cut(s) 92, 743
BsaWI WCCGGW 1 cut(s) 35
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 246, 680
Bse1I ACTGG 3 cut(s) 347, 376, 818
Bse21I CCTNAGG 1 cut(s) 279
Bse3DI GCAATG 2 cut(s) 166, 432
Bse8I GATNNNNATC 1 cut(s) 330
BseBI CCWGG 3 cut(s) 84, 539, 636
BseGI GGATG 2 cut(s) 50, 236
BseJI GATNNNNATC 1 cut(s) 330
BseLI CCNNNNNNNGG 3 cut(s) 56, 246, 680
BseMI GCAATG 2 cut(s) 166, 432
BseMII CTCAG 5 cut(s) 270, 589, 624, 684, 840
BseNI ACTGG 3 cut(s) 347, 376, 818
BseRI GAGGAG 1 cut(s) 472
BseXI GCAGC 2 cut(s) 97, 322
BseYI CCCAGC 1 cut(s) 732
BsgI GTGCAG 1 cut(s) 699
BshFI GGCC 3 cut(s) 77, 346, 455
BsiHKAI GWGCWC 2 cut(s) 148, 576
BsiSI CCGG 1 cut(s) 36
BslI CCNNNNNNNGG 3 cut(s) 56, 246, 680
BsmAI GTCTC 3 cut(s) 92, 743, 890
BsmBI CGTCTC 1 cut(s) 890
BsnI GGCC 3 cut(s) 77, 346, 455
Bso31I GGTCTC 2 cut(s) 92, 743
Bsp1286I GDGCHC 2 cut(s) 148, 576
Bsp143I GATC 7 cut(s) 79, 262, 304, 325, 365, 499, 786
BspACI CCGC 1 cut(s) 528
BspANI GGCC 3 cut(s) 77, 346, 455
BspCNI CTCAG 5 cut(s) 271, 588, 623, 685, 841
BspHI TCATGA 2 cut(s) 259, 892
BspMAI CTGCAG 1 cut(s) 312
BspPI GGATC 5 cut(s) 74, 257, 312, 373, 794
BspTNI GGTCTC 2 cut(s) 92, 743
BsrDI GCAATG 2 cut(s) 166, 432
BsrI ACTGG 3 cut(s) 347, 376, 818
BssMI GATC 7 cut(s) 79, 262, 304, 325, 365, 499, 786
BssSI CACGAG 1 cut(s) 516
Bst2BI CACGAG 1 cut(s) 516
Bst2UI CCWGG 3 cut(s) 84, 539, 636
Bst4CI ACNGT 1 cut(s) 935
BstAPI GCANNNNNTGC 1 cut(s) 722
BstC8I GCNNGC 1 cut(s) 75
BstDEI CTNAG 5 cut(s) 279, 575, 610, 693, 849
BstF5I GGATG 2 cut(s) 50, 236
BstKTI GATC 7 cut(s) 82, 265, 307, 328, 368, 502, 789
BstMAI GTCTC 3 cut(s) 92, 743, 890
BstMBI GATC 7 cut(s) 79, 262, 304, 325, 365, 499, 786
BstMWI GCNNNNNNNGC 2 cut(s) 107, 722
BstNI CCWGG 3 cut(s) 84, 539, 636
BstNSI RCATGY 2 cut(s) 835, 883
BstSCI CCNGG 3 cut(s) 82, 537, 634
BstSFI CTRYAG 2 cut(s) 299, 308
BstV1I GCAGC 2 cut(s) 97, 322
BstV2I GAAGAC 2 cut(s) 786, 834
BstX2I RGATCY 3 cut(s) 304, 365, 499
BstYI RGATCY 3 cut(s) 304, 365, 499
Bsu36I CCTNAGG 1 cut(s) 279
BsuRI GGCC 3 cut(s) 77, 346, 455
BtgZI GCGATG 1 cut(s) 672
BtsCI GGATG 2 cut(s) 50, 236
BtsIMutI CAGTG 1 cut(s) 340
Cac8I GCNNGC 1 cut(s) 75
CaiI CAGNNNCTG 1 cut(s) 307
CciI TCATGA 2 cut(s) 259, 892
Cfr13I GGNCC 2 cut(s) 454, 816
CseI GACGC 1 cut(s) 116
CsiI ACCWGGT 1 cut(s) 537
Csp6I GTAC 2 cut(s) 252, 616
CviAII CATG 7 cut(s) 260, 417, 558, 776, 832, 880, 893
CviJI RGCY 9 cut(s) 77, 313, 346, 354, 375, 455, 515, 649, 700
CviKI_1 RGCY 9 cut(s) 77, 313, 346, 354, 375, 455, 515, 649, 700
CviQI GTAC 2 cut(s) 252, 616
DdeI CTNAG 5 cut(s) 279, 575, 610, 693, 849
DpnI GATC 7 cut(s) 81, 264, 306, 327, 367, 501, 788
DpnII GATC 7 cut(s) 79, 262, 304, 325, 365, 499, 786
DraI TTTAAA 1 cut(s) 379
Eco31I GGTCTC 2 cut(s) 92, 743
Eco47I GGWCC 1 cut(s) 816
Eco57I CTGAAG 1 cut(s) 206
Eco81I CCTNAGG 1 cut(s) 279
EcoRII CCWGG 3 cut(s) 82, 537, 634
Esp3I CGTCTC 1 cut(s) 890
FaeI CATG 7 cut(s) 263, 420, 561, 779, 835, 883, 896
FatI CATG 7 cut(s) 259, 416, 557, 775, 831, 879, 892
FauI CCCGC 1 cut(s) 535
FblI GTMKAC 1 cut(s) 105
Fnu4HI GCNGC 2 cut(s) 111, 311
FokI GGATG 2 cut(s) 37, 223
Fsp4HI GCNGC 2 cut(s) 111, 311
FspBI CTAG 2 cut(s) 62, 411
GluI GCNGC 2 cut(s) 111, 311
GsaI CCCAGC 1 cut(s) 736
GsuI CTGGAG 1 cut(s) 618
HaeIII GGCC 3 cut(s) 77, 346, 455
HapII CCGG 1 cut(s) 36
HgaI GACGC 1 cut(s) 116
Hin1II CATG 7 cut(s) 263, 420, 561, 779, 835, 883, 896
HincII GTYRAC 2 cut(s) 106, 535
HindII GTYRAC 2 cut(s) 106, 535
HinfI GANTC 6 cut(s) 18, 431, 443, 709, 901, 913
HpaI GTTAAC 1 cut(s) 535
HpaII CCGG 1 cut(s) 36
HphI GGTGA 1 cut(s) 542
Hpy166II GTNNAC 3 cut(s) 106, 252, 535
Hpy188I TCNGA 2 cut(s) 95, 850
Hpy188III TCNNGA 6 cut(s) 184, 260, 269, 358, 893, 917
Hpy8I GTNNAC 3 cut(s) 106, 252, 535
Hpy99I CGWCG 4 cut(s) 59, 95, 110, 326
HpyAV CCTTC 1 cut(s) 564
HpyCH4III ACNGT 1 cut(s) 935
HpyCH4IV ACGT 4 cut(s) 68, 321, 570, 644
HpyCH4V TGCA 4 cut(s) 310, 588, 716, 725
HpyF10VI GCNNNNNNNGC 2 cut(s) 107, 722
HpyF3I CTNAG 5 cut(s) 279, 575, 610, 693, 849
HpySE526I ACGT 4 cut(s) 68, 321, 570, 644
Hsp92II CATG 7 cut(s) 263, 420, 561, 779, 835, 883, 896
KspAI GTTAAC 1 cut(s) 535
Kzo9I GATC 7 cut(s) 79, 262, 304, 325, 365, 499, 786
LmnI GCTCC 1 cut(s) 38
Lsp1109I GCAGC 2 cut(s) 97, 322
MabI ACCWGGT 1 cut(s) 537
MaeI CTAG 2 cut(s) 62, 411
MaeII ACGT 4 cut(s) 68, 321, 570, 644
MaeIII GTNAC 2 cut(s) 131, 548
MalI GATC 7 cut(s) 81, 264, 306, 327, 367, 501, 788
MboI GATC 7 cut(s) 79, 262, 304, 325, 365, 499, 786
MboII GAAGA 8 cut(s) 55, 130, 199, 679, 752, 791, 839, 932
MflI RGATCY 3 cut(s) 304, 365, 499
MhlI GDGCHC 2 cut(s) 148, 576
MluCI AATT 4 cut(s) 12, 191, 475, 796
MlyI GAGTC 3 cut(s) 703, 910, 922
MmeI TCCRAC 1 cut(s) 73
MnlI CCTC 7 cut(s) 214, 274, 276, 365, 493, 534, 869
MseI TTAA 4 cut(s) 213, 288, 378, 534
MspA1I CMGCKG 1 cut(s) 530
MspI CCGG 1 cut(s) 36
MspR9I CCNGG 3 cut(s) 84, 539, 636
MvaI CCWGG 3 cut(s) 84, 539, 636
MwoI GCNNNNNNNGC 2 cut(s) 107, 722
NdeII GATC 7 cut(s) 79, 262, 304, 325, 365, 499, 786
NlaIII CATG 7 cut(s) 263, 420, 561, 779, 835, 883, 896
NmeAIII GCCGAG 1 cut(s) 681
NmuCI GTSAC 2 cut(s) 131, 548
NspI RCATGY 2 cut(s) 835, 883
PagI TCATGA 2 cut(s) 259, 892
PciI ACATGT 1 cut(s) 831
PcsI WCGNNNNNNNCGW 1 cut(s) 650
PfeI GAWTC 3 cut(s) 18, 431, 443
PflFI GACNNNGTC 1 cut(s) 320
PflMI CCANNNNNTGG 1 cut(s) 246
PfoI TCCNGGA 1 cut(s) 634
PkrI GCNGC 2 cut(s) 112, 312
PleI GAGTC 3 cut(s) 703, 909, 921
PpsI GAGTC 3 cut(s) 703, 909, 921
PscI ACATGT 1 cut(s) 831
Psp6I CCWGG 3 cut(s) 82, 537, 634
PspFI CCCAGC 1 cut(s) 732
PspGI CCWGG 3 cut(s) 82, 537, 634
PspPI GGNCC 2 cut(s) 454, 816
PstI CTGCAG 1 cut(s) 312
PstNI CAGNNNCTG 1 cut(s) 307
PsuI RGATCY 3 cut(s) 304, 365, 499
PsyI GACNNNGTC 1 cut(s) 320
RsaI GTAC 2 cut(s) 253, 617
RsaNI GTAC 2 cut(s) 252, 616
SalI GTCGAC 1 cut(s) 104
SaqAI TTAA 4 cut(s) 213, 288, 378, 534
SatI GCNGC 2 cut(s) 111, 311
Sau3AI GATC 7 cut(s) 79, 262, 304, 325, 365, 499, 786
Sau96I GGNCC 2 cut(s) 454, 816
SchI GAGTC 3 cut(s) 703, 910, 922
ScrFI CCNGG 3 cut(s) 84, 539, 636
SduI GDGCHC 2 cut(s) 148, 576
SetI ASST 9 cut(s) 71, 315, 324, 543, 573, 647, 702, 723, 869
SexAI ACCWGGT 1 cut(s) 537
SfcI CTRYAG 2 cut(s) 299, 308
SinI GGWCC 1 cut(s) 816
SmlI CTYRAG 2 cut(s) 267, 356
SmoI CTYRAG 2 cut(s) 267, 356
Sse9I AATT 4 cut(s) 12, 191, 475, 796
SsiI CCGC 1 cut(s) 528
SspMI CTAG 2 cut(s) 62, 411
StyD4I CCNGG 3 cut(s) 82, 537, 634
TaaI ACNGT 1 cut(s) 935
TaiI ACGT 4 cut(s) 71, 324, 573, 647
TaqI TCGA 3 cut(s) 105, 324, 801
TaqII GACCGA 1 cut(s) 47
TasI AATT 4 cut(s) 12, 191, 475, 796
TatI WGTACW 1 cut(s) 251
TfiI GAWTC 3 cut(s) 18, 431, 443
Tru1I TTAA 4 cut(s) 213, 288, 378, 534
Tru9I TTAA 4 cut(s) 213, 288, 378, 534
TscAI CASTG 1 cut(s) 347
TseFI GTSAC 2 cut(s) 131, 548
TseI GCWGC 2 cut(s) 110, 310
Tsp45I GTSAC 2 cut(s) 131, 548
TspDTI ATGAA 6 cut(s) 177, 220, 546, 593, 792, 881
TspGWI ACGGA 1 cut(s) 43
TspRI CASTG 1 cut(s) 347
Tth111I GACNNNGTC 1 cut(s) 320
Van91I CCANNNNNTGG 1 cut(s) 246
VpaK11BI GGWCC 1 cut(s) 816
XapI RAATTY 1 cut(s) 796
XceI RCATGY 2 cut(s) 835, 883
XcmI CCANNNNNNNNNTGG 1 cut(s) 642
XmiI GTMKAC 1 cut(s) 105
XspI CTAG 2 cut(s) 62, 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.