MD12G1150400.v1.1

Aldo-keto reductase family 4 member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
23054870 .. 23057536
2667 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1150400.v1.1.491

Sequence Viewer

Length: 948 bp
ATGGCGGACGATATTCGTTTCTTCCGGTTGAACACCGGATCTAAGATCCCTTCAGTAGGGTTAGGGACCTGGCAGTCGAGCCCTGGCCTCGTCGGAGACGCCGTGGCCGCCGCCATCAAGGCAGGATATCGCCATATCGATTGTGCTCAACGCTATGGCAATGAGAAGGAGATTGGTTTGGTTCTCAAGAAGTTGTTTGAAGATGGCATGGTGAAGCGCGAGGATTTGTTTATTACCTCCAAACTCTGGAGTACAGATCATGCACCAGAAGATGTATTAGTGGCAATGGACAGGACTTTGAGAGACTTGCAGCTTGATTATGTTGACTTGTATCTGATGCATTGGCCAGTCCGGTTGAAGAAGGGGTCAGCAAGTTTTGATCCTGAAAACCTGGTTCAACCAGATATCCCTTGCACTTGGAGAGCAATGGAAACCCTCTATGATTCGGGTAAGGCTCGAGCTATTGGCGTAAGCAATTTCTCTACGAAGAAACTGTCAGATTTGCTGGATGTGGCACATATTCCTCCAGCTGCTGTCCAAGTGGAGTGTCATCCTTCGTGGCAGCAAGGCAAGCTACATTCTTTCTGTAAATCCAAGGGAGTTCATTTACAGGGATACTCACCACTGGGTTCTCCGGGCACATCATGGATCAAAGGTGACGTCCTTCAGAATCCAATCCTTCTCATGGTCGCAGAAAAACTAGGCAAAACTCCTGCACAAGTTGCTCTTAGGTGGGGACTGCAAATGGGGCACAGTGTTCTTCCTAAGAGTACTAATGAAACAAGGATCAAGGAGAACTTCAATGTCTTTGGCTGGTCTATCCCGGAGGACTTGTTCGCCAAGCTTTCTGAGATTCAGCAGGCAAGATTGGTTAGAGGGACTCAATTTGTTCATGATACGTATGGGGCCTACAGGACGCTTGAGGAATTGTGGGACGGAGAAATTTAG

Protein Analysis

316

Amino Acids

35.22

Weight (kDa)

6.76

Isoelectric Point (pI)

35.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 19 - 285 7.9e-52 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014906)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37770 AT2G37790 AT3G53880 AT3G53880
fragaria_vesca FvH4_6g13012 FvH4_6g13012
malus_domestica MD12G1150400.v1.1
prunus_persica Prupe.6G262000_v2.0.a1
pyrus_communis pycom12g14420
rosa_chinensis RchiOBHm_Chr3g0465141
rosa_multiflora Rmu_sc0003386.1_g000011
rosa_roxburghii Rroxscaffold_6G00415210
rosa_rugosa Rorug03G0075700
rosa_samantha Rh3BG139400 Rh3DG140700
rosa_wichuraiana Rw3G011410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 73
AatII GACGTC 1 cut(s) 663
AccB7I CCANNNNNTGG 1 cut(s) 246
AccII CGCG 1 cut(s) 219
AciI CCGC 3 cut(s) 5, 108, 111
AclWI GGATC 5 cut(s) 40, 46, 374, 656, 794
AcoI YGGCCR 2 cut(s) 105, 344
AcsI RAATTY 1 cut(s) 942
AcuI CTGAAG 2 cut(s) 36, 650
AcyI GRCGYC 2 cut(s) 99, 660
AfaI GTAC 2 cut(s) 253, 772
AfiI CCNNNNNNNGG 3 cut(s) 56, 246, 685
AgsI TTSAA 5 cut(s) 31, 200, 358, 398, 802
AjnI CCWGG 3 cut(s) 68, 82, 390
AloI GAACNNNNNNTCC 2 cut(s) 818, 850
AluBI AGCT 5 cut(s) 313, 461, 530, 574, 844
AluI AGCT 5 cut(s) 313, 461, 530, 574, 844
Alw21I GWGCWC 1 cut(s) 148
Alw26I GTCTC 2 cut(s) 90, 297
AlwI GGATC 5 cut(s) 40, 46, 374, 656, 794
AlwNI CAGNNNCTG 1 cut(s) 533
Ama87I CYCGRG 1 cut(s) 456
AoxI GGCC 4 cut(s) 85, 105, 344, 906
ApeKI GCWGC 3 cut(s) 310, 530, 562
ApoI RAATTY 1 cut(s) 942
ArsI GACNNNNNNTTYG 4 cut(s) 479, 511, 645, 677
AspLEI GCGC 1 cut(s) 219
AspS9I GGNCC 2 cut(s) 66, 906
AsuC2I CCSGG 2 cut(s) 636, 824
AsuHPI GGTGA 3 cut(s) 223, 612, 668
AvaI CYCGRG 1 cut(s) 456
AvaII GGWCC 1 cut(s) 66
BaeGI GKGCMC 2 cut(s) 641, 753
BalI TGGCCA 1 cut(s) 346
BanII GRGCYC 1 cut(s) 83
Bbv12I GWGCWC 1 cut(s) 148
BbvI GCAGC 3 cut(s) 322, 517, 574
BccI CCATC 2 cut(s) 122, 197
BceAI ACGGC 1 cut(s) 86
BciT130I CCWGG 3 cut(s) 70, 84, 392
BciVI GTATCC 1 cut(s) 608
BcnI CCSGG 2 cut(s) 636, 824
BcoDI GTCTC 2 cut(s) 90, 297
BfaI CTAG 1 cut(s) 701
BfmI CTRYAG 1 cut(s) 910
BfuI GTATCC 1 cut(s) 608
BglI GCCNNNNNGGC 1 cut(s) 119
BisI GCNGC 5 cut(s) 108, 111, 311, 531, 563
BlsI GCNGC 5 cut(s) 109, 112, 312, 532, 564
BmcAI AGTACT 1 cut(s) 772
Bme1390I CCNGG 5 cut(s) 70, 84, 392, 636, 824
Bme18I GGWCC 1 cut(s) 66
BmeT110I CYCGRG 1 cut(s) 456
BmgT120I GGNCC 2 cut(s) 66, 906
BmiI GGNNCC 2 cut(s) 67, 907
BmrFI CCNGG 5 cut(s) 70, 84, 392, 636, 824
BmrI ACTGGG 1 cut(s) 635
BmsI GCATC 1 cut(s) 327
BmuI ACTGGG 1 cut(s) 635
BpmI CTGGAG 2 cut(s) 268, 510
BpuEI CTTGAG 2 cut(s) 170, 941
BpuMI CCSGG 2 cut(s) 636, 824
Bsa29I ATCGAT 1 cut(s) 138
BsaAI YACGTR 1 cut(s) 900
BsaHI GRCGYC 2 cut(s) 99, 660
BsaJI CCNNGG 3 cut(s) 82, 102, 594
BsaWI WCCGGW 3 cut(s) 24, 35, 351
BsaXI ACNNNNNCTCC 4 cut(s) 87, 117, 818, 848
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 246, 685
Bse1I ACTGG 2 cut(s) 347, 630
Bse3DI GCAATG 3 cut(s) 166, 291, 432
BseBI CCWGG 3 cut(s) 70, 84, 392
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 3 cut(s) 82, 102, 594
BseGI GGATG 2 cut(s) 514, 550
BseLI CCNNNNNNNGG 3 cut(s) 56, 246, 685
BseMI GCAATG 3 cut(s) 166, 291, 432
BseMII CTCAG 1 cut(s) 840
BseNI ACTGG 2 cut(s) 347, 630
BseSI GKGCMC 2 cut(s) 641, 753
BseXI GCAGC 3 cut(s) 322, 517, 574
BsgI GTGCAG 1 cut(s) 699
Bsh1236I CGCG 1 cut(s) 219
BshFI GGCC 4 cut(s) 87, 107, 346, 908
BshVI ATCGAT 1 cut(s) 138
BsiHKAI GWGCWC 1 cut(s) 148
BsiHKCI CYCGRG 1 cut(s) 456
BsiSI CCGG 5 cut(s) 25, 36, 352, 635, 824
BslFI GGGAC 3 cut(s) 79, 750, 892
BslI CCNNNNNNNGG 3 cut(s) 56, 246, 685
BsmAI GTCTC 2 cut(s) 90, 297
BsmBI CGTCTC 1 cut(s) 90
BsmFI GGGAC 3 cut(s) 79, 750, 892
BsnI GGCC 4 cut(s) 87, 107, 346, 908
BsoBI CYCGRG 1 cut(s) 456
Bsp1286I GDGCHC 4 cut(s) 83, 148, 641, 753
Bsp143I GATC 6 cut(s) 38, 45, 256, 379, 648, 786
BspACI CCGC 3 cut(s) 5, 108, 111
BspANI GGCC 4 cut(s) 87, 107, 346, 908
BspCNI CTCAG 1 cut(s) 841
BspDI ATCGAT 1 cut(s) 138
BspFNI CGCG 1 cut(s) 219
BspHI TCATGA 1 cut(s) 892
BspLI GGNNCC 2 cut(s) 67, 907
BspPI GGATC 5 cut(s) 40, 46, 374, 656, 794
BsrDI GCAATG 3 cut(s) 166, 291, 432
BsrI ACTGG 2 cut(s) 347, 630
BssECI CCNNGG 3 cut(s) 82, 102, 594
BssMI GATC 6 cut(s) 38, 45, 256, 379, 648, 786
BssNI GRCGYC 2 cut(s) 99, 660
BssT1I CCWWGG 1 cut(s) 594
Bst2UI CCWGG 3 cut(s) 70, 84, 392
Bst4CI ACNGT 2 cut(s) 495, 755
BstACI GRCGYC 2 cut(s) 99, 660
BstAPI GCANNNNNTGC 1 cut(s) 722
BstBAI YACGTR 1 cut(s) 900
BstC8I GCNNGC 2 cut(s) 572, 861
BstDEI CTNAG 4 cut(s) 42, 728, 765, 849
BstDSI CCRYGG 1 cut(s) 102
BstENI CCTNNNNNAGG 1 cut(s) 54
BstF5I GGATG 2 cut(s) 514, 550
BstFNI CGCG 1 cut(s) 219
BstHHI GCGC 1 cut(s) 219
BstKTI GATC 6 cut(s) 41, 48, 259, 382, 651, 789
BstMAI GTCTC 2 cut(s) 90, 297
BstMBI GATC 6 cut(s) 38, 45, 256, 379, 648, 786
BstMWI GCNNNNNNNGC 5 cut(s) 107, 119, 571, 722, 748
BstNI CCWGG 3 cut(s) 70, 84, 392
BstSCI CCNGG 5 cut(s) 68, 82, 390, 634, 822
BstSFI CTRYAG 1 cut(s) 910
BstSLI GKGCMC 2 cut(s) 641, 753
BstSNI TACGTA 1 cut(s) 900
BstUI CGCG 1 cut(s) 219
BstV1I GCAGC 3 cut(s) 322, 517, 574
BstX2I RGATCY 2 cut(s) 38, 45
BstYI RGATCY 2 cut(s) 38, 45
Bsu15I ATCGAT 1 cut(s) 138
BsuI GTATCC 1 cut(s) 608
BsuRI GGCC 4 cut(s) 87, 107, 346, 908
BsuTUI ATCGAT 1 cut(s) 138
BtgI CCRYGG 1 cut(s) 102
BtsCI GGATG 2 cut(s) 514, 550
BtsIMutI CAGTG 2 cut(s) 623, 760
Cac8I GCNNGC 2 cut(s) 572, 861
CaiI CAGNNNCTG 1 cut(s) 533
CciI TCATGA 1 cut(s) 892
CfoI GCGC 1 cut(s) 219
Cfr13I GGNCC 2 cut(s) 66, 906
ClaI ATCGAT 1 cut(s) 138
CseI GACGC 2 cut(s) 107, 925
CsiI ACCWGGT 1 cut(s) 390
Csp6I GTAC 2 cut(s) 252, 771
CviAII CATG 5 cut(s) 208, 260, 645, 685, 893
CviQI GTAC 2 cut(s) 252, 771
DdeI CTNAG 4 cut(s) 42, 728, 765, 849
DpnI GATC 6 cut(s) 40, 47, 258, 381, 650, 788
DpnII GATC 6 cut(s) 38, 45, 256, 379, 648, 786
DrdI GACNNNNNNGTC 1 cut(s) 73
DseDI GACNNNNNNGTC 1 cut(s) 73
EaeI YGGCCR 2 cut(s) 105, 344
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 900
Eco130I CCWWGG 1 cut(s) 594
Eco24I GRGCYC 1 cut(s) 83
Eco32I GATATC 2 cut(s) 128, 406
Eco47I GGWCC 1 cut(s) 66
Eco57I CTGAAG 2 cut(s) 36, 650
Eco88I CYCGRG 1 cut(s) 456
EcoNI CCTNNNNNAGG 1 cut(s) 54
EcoO109I RGGNCCY 2 cut(s) 66, 906
EcoRII CCWGG 3 cut(s) 68, 82, 390
EcoRV GATATC 2 cut(s) 128, 406
EcoT14I CCWWGG 1 cut(s) 594
EcoT22I ATGCAT 1 cut(s) 342
EcoT38I GRGCYC 1 cut(s) 83
ErhI CCWWGG 1 cut(s) 594
Esp3I CGTCTC 1 cut(s) 90
FaeI CATG 5 cut(s) 211, 263, 648, 688, 896
FalI AAGNNNNNCTT 4 cut(s) 711, 743, 782, 814
FaqI GGGAC 3 cut(s) 79, 750, 892
FatI CATG 5 cut(s) 207, 259, 644, 684, 892
Fnu4HI GCNGC 5 cut(s) 108, 111, 311, 531, 563
FokI GGATG 2 cut(s) 521, 537
FriOI GRGCYC 1 cut(s) 83
Fsp4HI GCNGC 5 cut(s) 108, 111, 311, 531, 563
FspBI CTAG 1 cut(s) 701
GlaI GCGC 1 cut(s) 218
GluI GCNGC 5 cut(s) 108, 111, 311, 531, 563
GsuI CTGGAG 2 cut(s) 268, 510
HaeIII GGCC 4 cut(s) 87, 107, 346, 908
HapII CCGG 5 cut(s) 25, 36, 352, 635, 824
HgaI GACGC 2 cut(s) 107, 925
HhaI GCGC 1 cut(s) 219
Hin1I GRCGYC 2 cut(s) 99, 660
Hin1II CATG 5 cut(s) 211, 263, 648, 688, 896
Hin6I GCGC 1 cut(s) 217
HinP1I GCGC 1 cut(s) 217
HincII GTYRAC 1 cut(s) 325
HindII GTYRAC 1 cut(s) 325
HindIII AAGCTT 1 cut(s) 842
HinfI GANTC 4 cut(s) 443, 670, 853, 880
HpaII CCGG 5 cut(s) 25, 36, 352, 635, 824
HphI GGTGA 3 cut(s) 223, 612, 668
Hpy166II GTNNAC 1 cut(s) 325
Hpy188I TCNGA 5 cut(s) 95, 336, 499, 669, 850
Hpy188III TCNNGA 4 cut(s) 187, 247, 383, 893
Hpy8I GTNNAC 1 cut(s) 325
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 6 cut(s) 60, 160, 355, 564, 674, 689
HpyCH4III ACNGT 2 cut(s) 495, 755
HpyCH4IV ACGT 2 cut(s) 660, 899
HpyCH4V TGCA 6 cut(s) 263, 310, 340, 414, 716, 742
HpyF10VI GCNNNNNNNGC 5 cut(s) 107, 119, 571, 722, 748
HpyF3I CTNAG 4 cut(s) 42, 728, 765, 849
HpySE526I ACGT 2 cut(s) 660, 899
Hsp92I GRCGYC 2 cut(s) 99, 660
Hsp92II CATG 5 cut(s) 211, 263, 648, 688, 896
HspAI GCGC 1 cut(s) 217
Kzo9I GATC 6 cut(s) 38, 45, 256, 379, 648, 786
Lsp1109I GCAGC 3 cut(s) 322, 517, 574
LweI GCATC 1 cut(s) 327
MabI ACCWGGT 1 cut(s) 390
MaeI CTAG 1 cut(s) 701
MaeII ACGT 2 cut(s) 660, 899
MaeIII GTNAC 1 cut(s) 656
MalI GATC 6 cut(s) 40, 47, 258, 381, 650, 788
MboI GATC 6 cut(s) 38, 45, 256, 379, 648, 786
MboII GAAGA 6 cut(s) 13, 212, 281, 370, 499, 752
MflI RGATCY 2 cut(s) 38, 45
MhlI GDGCHC 4 cut(s) 83, 148, 641, 753
MlsI TGGCCA 1 cut(s) 346
MluCI AATT 4 cut(s) 475, 884, 926, 942
MluNI TGGCCA 1 cut(s) 346
MlyI GAGTC 1 cut(s) 874
MmeI TCCRAC 1 cut(s) 73
MnlI CCTC 8 cut(s) 98, 214, 247, 446, 534, 820, 869, 916
Mox20I TGGCCA 1 cut(s) 346
Mph1103I ATGCAT 1 cut(s) 342
MscI TGGCCA 1 cut(s) 346
Msp20I TGGCCA 1 cut(s) 346
MspA1I CMGCKG 1 cut(s) 530
MspI CCGG 5 cut(s) 25, 36, 352, 635, 824
MspR9I CCNGG 5 cut(s) 70, 84, 392, 636, 824
MvaI CCWGG 3 cut(s) 70, 84, 392
MvnI CGCG 1 cut(s) 219
MwoI GCNNNNNNNGC 5 cut(s) 107, 119, 571, 722, 748
NciI CCSGG 2 cut(s) 636, 824
NdeII GATC 6 cut(s) 38, 45, 256, 379, 648, 786
NlaIII CATG 5 cut(s) 211, 263, 648, 688, 896
NlaIV GGNNCC 2 cut(s) 67, 907
NmuCI GTSAC 1 cut(s) 656
NsiI ATGCAT 1 cut(s) 342
PaeR7I CTCGAG 1 cut(s) 456
PagI TCATGA 1 cut(s) 892
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PfeI GAWTC 3 cut(s) 443, 670, 853
PflMI CCANNNNNTGG 1 cut(s) 246
PfoI TCCNGGA 1 cut(s) 822
PkrI GCNGC 5 cut(s) 109, 112, 312, 532, 564
PleI GAGTC 1 cut(s) 874
PpsI GAGTC 1 cut(s) 874
Ppu21I YACGTR 1 cut(s) 900
PpuMI RGGWCCY 1 cut(s) 66
Psp5II RGGWCCY 1 cut(s) 66
Psp6I CCWGG 3 cut(s) 68, 82, 390
PspGI CCWGG 3 cut(s) 68, 82, 390
PspN4I GGNNCC 2 cut(s) 67, 907
PspPI GGNCC 2 cut(s) 66, 906
PspPPI RGGWCCY 1 cut(s) 66
PspXI VCTCGAGB 1 cut(s) 456
PstNI CAGNNNCTG 1 cut(s) 533
PsuI RGATCY 2 cut(s) 38, 45
PvuII CAGCTG 1 cut(s) 530
RsaI GTAC 2 cut(s) 253, 772
RsaNI GTAC 2 cut(s) 252, 771
SatI GCNGC 5 cut(s) 108, 111, 311, 531, 563
Sau3AI GATC 6 cut(s) 38, 45, 256, 379, 648, 786
Sau96I GGNCC 2 cut(s) 66, 906
ScaI AGTACT 1 cut(s) 772
SchI GAGTC 1 cut(s) 874
ScrFI CCNGG 5 cut(s) 70, 84, 392, 636, 824
SduI GDGCHC 4 cut(s) 83, 148, 641, 753
SexAI ACCWGGT 1 cut(s) 390
SfaNI GCATC 1 cut(s) 327
SfcI CTRYAG 1 cut(s) 910
Sfr274I CTCGAG 1 cut(s) 456
SinI GGWCC 1 cut(s) 66
SlaI CTCGAG 1 cut(s) 456
SmlI CTYRAG 3 cut(s) 185, 456, 920
SmoI CTYRAG 3 cut(s) 185, 456, 920
SnaBI TACGTA 1 cut(s) 900
Sse9I AATT 4 cut(s) 475, 884, 926, 942
SsiI CCGC 3 cut(s) 5, 108, 111
SspMI CTAG 1 cut(s) 701
StyD4I CCNGG 5 cut(s) 68, 82, 390, 634, 822
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 2 cut(s) 495, 755
TaiI ACGT 2 cut(s) 663, 902
TaqI TCGA 3 cut(s) 77, 138, 457
TasI AATT 4 cut(s) 475, 884, 926, 942
TatI WGTACW 2 cut(s) 251, 770
TauI GCSGC 2 cut(s) 110, 113
TfiI GAWTC 3 cut(s) 443, 670, 853
TscAI CASTG 2 cut(s) 630, 760
TseFI GTSAC 1 cut(s) 656
TseI GCWGC 3 cut(s) 310, 530, 562
Tsp45I GTSAC 1 cut(s) 656
TspDTI ATGAA 3 cut(s) 593, 792, 881
TspRI CASTG 2 cut(s) 630, 760
Van91I CCANNNNNTGG 1 cut(s) 246
VpaK11BI GGWCC 1 cut(s) 66
XagI CCTNNNNNAGG 1 cut(s) 54
XapI RAATTY 1 cut(s) 942
XhoI CTCGAG 1 cut(s) 456
XspI CTAG 1 cut(s) 701
ZraI GACGTC 1 cut(s) 661
ZrmI AGTACT 1 cut(s) 772
Zsp2I ATGCAT 1 cut(s) 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.