pycom12g14420

Aldo-keto reductase family 4 member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
16966329 .. 16968579
2251 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g14420.2

Sequence Viewer

Length: 948 bp
ATGGCGGACGATATTCGTTTCTTCCAGTTGAACACCGGATCTAAGATCCCTTCAGTAGGGTTAGGGACCTGGCAGTCGAGCCCTGGCCTCGTCGGAGACGCCGTGGCCGCGGCCATCAAGGCAGGATATCGCCATATCGATTGTGCTCAACGCTATGGCAATGAGAAGGAGATTGGTTTGGTTCTGAAGAAGTTGTTTGAAGATGGCGTGGTGAAGCGCGGGGATTTGTTTATTACCTCCAAACTCTGGTGTACAGATCATGCACCAGAAGATGTATTAGCGGCAATGGACAGGACCTTGAGAGACTTGCAGCTTGGTTATGTTGACTTGTATCTGATGCATTGGCCAGTCCAGTTGAAGAAGGGGTCAGCAAGTTTTGATCCTGAAAACCTGGTTCAACCAGATATCCCTTGCACTTGGAGAGCAATGGAAACCCTCTACGATTTGGGTAAGGCTCGAGCTATTGGCGTGAGCAATTTCTCTACGAAGAAACTGTCAGATTTGCTGGATGTGGCACATATTCCTCCAGCTGCTGTCCAAGTGGAGTGTCATCCTTCGTGGCAGCAAGGCAAGCTACATTCTTTCTGTAAATCCAGGGGAGTTCATATACAGGGATACTCACCACTGGGTTCTCCGGGCACATCATGGATCAAAGGTGACGTCCTTCAGAATCCAATTCTTCTCATGGTTGCAGAAAAACTAGGCAAAACTCCTGCACAAGTGGCTCTTCGGTGGGGACTGCAAATGGGGCACAGTGTTCTTCCCAAGAGTACTAATGAAACAAGGATCAAGGAGAACTTCAATGTCTTTGGCTGGTCTATCCCGGAGGACTTGTTAACCAAGCTATCTGAGATTCAGCAGGCAAGATTGGTTAGAGGGACTCAATTTGTTCATGATACGTATGGGGCCTACAGGACGCTTGAGGAATTGTGGGACGGAGAAATTTAG

Protein Analysis

316

Amino Acids

35.04

Weight (kDa)

6.76

Isoelectric Point (pI)

35.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014906)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37770 AT2G37790 AT3G53880 AT3G53880
fragaria_vesca FvH4_6g13012 FvH4_6g13012
malus_domestica MD12G1150400.v1.1
prunus_persica Prupe.6G262000_v2.0.a1
pyrus_communis pycom12g14420
rosa_chinensis RchiOBHm_Chr3g0465141
rosa_multiflora Rmu_sc0003386.1_g000011
rosa_roxburghii Rroxscaffold_6G00415210
rosa_rugosa Rorug03G0075700
rosa_samantha Rh3BG139400 Rh3DG140700
rosa_wichuraiana Rw3G011410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 73
AatII GACGTC 1 cut(s) 663
AccB7I CCANNNNNTGG 1 cut(s) 246
AccII CGCG 2 cut(s) 110, 219
AciI CCGC 5 cut(s) 5, 108, 110, 219, 281
AclWI GGATC 5 cut(s) 40, 46, 374, 656, 794
AcoI YGGCCR 3 cut(s) 105, 111, 344
AcsI RAATTY 1 cut(s) 942
AcuI CTGAAG 3 cut(s) 36, 206, 650
AcyI GRCGYC 2 cut(s) 99, 660
AfaI GTAC 2 cut(s) 253, 772
AfiI CCNNNNNNNGG 2 cut(s) 56, 246
AgsI TTSAA 5 cut(s) 31, 200, 358, 398, 802
AjnI CCWGG 4 cut(s) 68, 82, 390, 593
AluBI AGCT 5 cut(s) 313, 461, 530, 574, 844
AluI AGCT 5 cut(s) 313, 461, 530, 574, 844
Alw21I GWGCWC 1 cut(s) 148
Alw26I GTCTC 2 cut(s) 90, 297
AlwI GGATC 5 cut(s) 40, 46, 374, 656, 794
AlwNI CAGNNNCTG 1 cut(s) 533
Ama87I CYCGRG 1 cut(s) 456
AoxI GGCC 5 cut(s) 85, 105, 111, 344, 906
ApeKI GCWGC 3 cut(s) 310, 530, 562
ApoI RAATTY 1 cut(s) 942
ArsI GACNNNNNNTTYG 4 cut(s) 479, 511, 645, 677
AspLEI GCGC 1 cut(s) 219
AspS9I GGNCC 3 cut(s) 66, 294, 906
AsuC2I CCSGG 2 cut(s) 636, 824
AsuHPI GGTGA 3 cut(s) 223, 612, 668
AvaI CYCGRG 1 cut(s) 456
AvaII GGWCC 2 cut(s) 66, 294
BaeGI GKGCMC 2 cut(s) 641, 753
BalI TGGCCA 1 cut(s) 346
BanII GRGCYC 1 cut(s) 83
Bbv12I GWGCWC 1 cut(s) 148
BbvI GCAGC 3 cut(s) 322, 517, 574
BccI CCATC 2 cut(s) 122, 197
BceAI ACGGC 1 cut(s) 86
BciT130I CCWGG 4 cut(s) 70, 84, 392, 595
BciVI GTATCC 1 cut(s) 608
BcnI CCSGG 2 cut(s) 636, 824
BcoDI GTCTC 2 cut(s) 90, 297
BfaI CTAG 1 cut(s) 701
BfmI CTRYAG 1 cut(s) 910
BfuI GTATCC 1 cut(s) 608
BglI GCCNNNNNGGC 1 cut(s) 119
BisI GCNGC 6 cut(s) 108, 111, 282, 311, 531, 563
BlsI GCNGC 6 cut(s) 109, 112, 283, 312, 532, 564
BmcAI AGTACT 1 cut(s) 772
Bme1390I CCNGG 6 cut(s) 70, 84, 392, 595, 636, 824
Bme18I GGWCC 2 cut(s) 66, 294
BmeT110I CYCGRG 1 cut(s) 456
BmgT120I GGNCC 3 cut(s) 66, 294, 906
BmiI GGNNCC 2 cut(s) 67, 907
BmrFI CCNGG 6 cut(s) 70, 84, 392, 595, 636, 824
BmrI ACTGGG 1 cut(s) 635
BmsI GCATC 1 cut(s) 327
BmuI ACTGGG 1 cut(s) 635
BpmI CTGGAG 1 cut(s) 510
BpuEI CTTGAG 2 cut(s) 319, 941
BpuMI CCSGG 2 cut(s) 636, 824
Bsa29I ATCGAT 1 cut(s) 138
BsaAI YACGTR 1 cut(s) 900
BsaHI GRCGYC 2 cut(s) 99, 660
BsaJI CCNNGG 4 cut(s) 82, 102, 108, 594
BsaWI WCCGGW 1 cut(s) 35
BsaXI ACNNNNNCTCC 4 cut(s) 87, 117, 818, 848
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 246
Bse1I ACTGG 4 cut(s) 25, 347, 352, 630
Bse3DI GCAATG 3 cut(s) 166, 291, 432
BseBI CCWGG 4 cut(s) 70, 84, 392, 595
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 4 cut(s) 82, 102, 108, 594
BseGI GGATG 2 cut(s) 514, 550
BseLI CCNNNNNNNGG 2 cut(s) 56, 246
BseMI GCAATG 3 cut(s) 166, 291, 432
BseMII CTCAG 1 cut(s) 840
BseNI ACTGG 4 cut(s) 25, 347, 352, 630
BseSI GKGCMC 2 cut(s) 641, 753
BseXI GCAGC 3 cut(s) 322, 517, 574
BsgI GTGCAG 1 cut(s) 699
Bsh1236I CGCG 2 cut(s) 110, 219
BshFI GGCC 5 cut(s) 87, 107, 113, 346, 908
BshVI ATCGAT 1 cut(s) 138
BsiHKAI GWGCWC 1 cut(s) 148
BsiHKCI CYCGRG 1 cut(s) 456
BsiSI CCGG 3 cut(s) 36, 635, 824
BslFI GGGAC 3 cut(s) 79, 750, 892
BslI CCNNNNNNNGG 2 cut(s) 56, 246
BsmAI GTCTC 2 cut(s) 90, 297
BsmBI CGTCTC 1 cut(s) 90
BsmFI GGGAC 3 cut(s) 79, 750, 892
BsnI GGCC 5 cut(s) 87, 107, 113, 346, 908
BsoBI CYCGRG 1 cut(s) 456
Bsp1286I GDGCHC 4 cut(s) 83, 148, 641, 753
Bsp1407I TGTACA 1 cut(s) 251
Bsp143I GATC 6 cut(s) 38, 45, 256, 379, 648, 786
BspACI CCGC 5 cut(s) 5, 108, 110, 219, 281
BspANI GGCC 5 cut(s) 87, 107, 113, 346, 908
BspCNI CTCAG 1 cut(s) 841
BspDI ATCGAT 1 cut(s) 138
BspFNI CGCG 2 cut(s) 110, 219
BspHI TCATGA 1 cut(s) 892
BspLI GGNNCC 2 cut(s) 67, 907
BspPI GGATC 5 cut(s) 40, 46, 374, 656, 794
BspQI GCTCTTC 1 cut(s) 732
BsrDI GCAATG 3 cut(s) 166, 291, 432
BsrGI TGTACA 1 cut(s) 251
BsrI ACTGG 4 cut(s) 25, 347, 352, 630
BssECI CCNNGG 4 cut(s) 82, 102, 108, 594
BssMI GATC 6 cut(s) 38, 45, 256, 379, 648, 786
BssNI GRCGYC 2 cut(s) 99, 660
Bst2UI CCWGG 4 cut(s) 70, 84, 392, 595
Bst4CI ACNGT 2 cut(s) 495, 755
Bst6I CTCTTC 1 cut(s) 732
BstACI GRCGYC 2 cut(s) 99, 660
BstAUI TGTACA 1 cut(s) 251
BstBAI YACGTR 1 cut(s) 900
BstC8I GCNNGC 2 cut(s) 572, 861
BstDEI CTNAG 2 cut(s) 42, 849
BstDSI CCRYGG 2 cut(s) 102, 108
BstENI CCTNNNNNAGG 1 cut(s) 54
BstF5I GGATG 2 cut(s) 514, 550
BstFNI CGCG 2 cut(s) 110, 219
BstHHI GCGC 1 cut(s) 219
BstKTI GATC 6 cut(s) 41, 48, 259, 382, 651, 789
BstMAI GTCTC 2 cut(s) 90, 297
BstMBI GATC 6 cut(s) 38, 45, 256, 379, 648, 786
BstMWI GCNNNNNNNGC 5 cut(s) 107, 119, 571, 722, 748
BstNI CCWGG 4 cut(s) 70, 84, 392, 595
BstSCI CCNGG 6 cut(s) 68, 82, 390, 593, 634, 822
BstSFI CTRYAG 1 cut(s) 910
BstSLI GKGCMC 2 cut(s) 641, 753
BstSNI TACGTA 1 cut(s) 900
BstUI CGCG 2 cut(s) 110, 219
BstV1I GCAGC 3 cut(s) 322, 517, 574
BstX2I RGATCY 2 cut(s) 38, 45
BstYI RGATCY 2 cut(s) 38, 45
Bsu15I ATCGAT 1 cut(s) 138
BsuI GTATCC 1 cut(s) 608
BsuRI GGCC 5 cut(s) 87, 107, 113, 346, 908
BsuTUI ATCGAT 1 cut(s) 138
BtgI CCRYGG 2 cut(s) 102, 108
BtsCI GGATG 2 cut(s) 514, 550
BtsIMutI CAGTG 2 cut(s) 623, 760
Cac8I GCNNGC 2 cut(s) 572, 861
CaiI CAGNNNCTG 1 cut(s) 533
CciI TCATGA 1 cut(s) 892
CfoI GCGC 1 cut(s) 219
Cfr13I GGNCC 3 cut(s) 66, 294, 906
Cfr42I CCGCGG 1 cut(s) 111
ClaI ATCGAT 1 cut(s) 138
CseI GACGC 2 cut(s) 107, 925
CsiI ACCWGGT 1 cut(s) 390
Csp6I GTAC 2 cut(s) 252, 771
CviAII CATG 4 cut(s) 260, 645, 685, 893
CviQI GTAC 2 cut(s) 252, 771
DdeI CTNAG 2 cut(s) 42, 849
DpnI GATC 6 cut(s) 40, 47, 258, 381, 650, 788
DpnII GATC 6 cut(s) 38, 45, 256, 379, 648, 786
DrdI GACNNNNNNGTC 1 cut(s) 73
DseDI GACNNNNNNGTC 1 cut(s) 73
EaeI YGGCCR 3 cut(s) 105, 111, 344
Eam1104I CTCTTC 1 cut(s) 732
EarI CTCTTC 1 cut(s) 732
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 900
Eco24I GRGCYC 1 cut(s) 83
Eco32I GATATC 2 cut(s) 128, 406
Eco47I GGWCC 2 cut(s) 66, 294
Eco57I CTGAAG 3 cut(s) 36, 206, 650
Eco88I CYCGRG 1 cut(s) 456
EcoNI CCTNNNNNAGG 1 cut(s) 54
EcoO109I RGGNCCY 3 cut(s) 66, 294, 906
EcoRII CCWGG 4 cut(s) 68, 82, 390, 593
EcoRV GATATC 2 cut(s) 128, 406
EcoT22I ATGCAT 1 cut(s) 342
EcoT38I GRGCYC 1 cut(s) 83
Esp3I CGTCTC 1 cut(s) 90
FaeI CATG 4 cut(s) 263, 648, 688, 896
FalI AAGNNNNNCTT 4 cut(s) 711, 743, 782, 814
FaqI GGGAC 3 cut(s) 79, 750, 892
FatI CATG 4 cut(s) 259, 644, 684, 892
FauI CCCGC 1 cut(s) 212
Fnu4HI GCNGC 6 cut(s) 108, 111, 282, 311, 531, 563
FokI GGATG 2 cut(s) 521, 537
FriOI GRGCYC 1 cut(s) 83
Fsp4HI GCNGC 6 cut(s) 108, 111, 282, 311, 531, 563
FspBI CTAG 1 cut(s) 701
GlaI GCGC 1 cut(s) 218
GluI GCNGC 6 cut(s) 108, 111, 282, 311, 531, 563
GsuI CTGGAG 1 cut(s) 510
HaeIII GGCC 5 cut(s) 87, 107, 113, 346, 908
HapII CCGG 3 cut(s) 36, 635, 824
HgaI GACGC 2 cut(s) 107, 925
HhaI GCGC 1 cut(s) 219
Hin1I GRCGYC 2 cut(s) 99, 660
Hin1II CATG 4 cut(s) 263, 648, 688, 896
Hin6I GCGC 1 cut(s) 217
HinP1I GCGC 1 cut(s) 217
HincII GTYRAC 2 cut(s) 325, 837
HindII GTYRAC 2 cut(s) 325, 837
HinfI GANTC 3 cut(s) 670, 853, 880
HpaI GTTAAC 1 cut(s) 837
HpaII CCGG 3 cut(s) 36, 635, 824
HphI GGTGA 3 cut(s) 223, 612, 668
Hpy166II GTNNAC 3 cut(s) 252, 325, 837
Hpy188I TCNGA 6 cut(s) 95, 186, 336, 499, 669, 850
Hpy188III TCNNGA 2 cut(s) 383, 893
Hpy8I GTNNAC 3 cut(s) 252, 325, 837
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 5 cut(s) 60, 160, 355, 564, 674
HpyCH4III ACNGT 2 cut(s) 495, 755
HpyCH4IV ACGT 2 cut(s) 660, 899
HpyCH4V TGCA 7 cut(s) 263, 310, 340, 414, 692, 716, 742
HpyF10VI GCNNNNNNNGC 5 cut(s) 107, 119, 571, 722, 748
HpyF3I CTNAG 2 cut(s) 42, 849
HpySE526I ACGT 2 cut(s) 660, 899
Hsp92I GRCGYC 2 cut(s) 99, 660
Hsp92II CATG 4 cut(s) 263, 648, 688, 896
HspAI GCGC 1 cut(s) 217
KspAI GTTAAC 1 cut(s) 837
KspI CCGCGG 1 cut(s) 111
Kzo9I GATC 6 cut(s) 38, 45, 256, 379, 648, 786
LguI GCTCTTC 1 cut(s) 732
Lsp1109I GCAGC 3 cut(s) 322, 517, 574
LweI GCATC 1 cut(s) 327
MabI ACCWGGT 1 cut(s) 390
MaeI CTAG 1 cut(s) 701
MaeII ACGT 2 cut(s) 660, 899
MaeIII GTNAC 1 cut(s) 656
MalI GATC 6 cut(s) 40, 47, 258, 381, 650, 788
MboI GATC 6 cut(s) 38, 45, 256, 379, 648, 786
MboII GAAGA 9 cut(s) 13, 199, 212, 281, 370, 499, 671, 719, 752
MflI RGATCY 2 cut(s) 38, 45
MhlI GDGCHC 4 cut(s) 83, 148, 641, 753
MlsI TGGCCA 1 cut(s) 346
MluCI AATT 5 cut(s) 475, 675, 884, 926, 942
MluNI TGGCCA 1 cut(s) 346
MlyI GAGTC 1 cut(s) 874
MmeI TCCRAC 1 cut(s) 73
MnlI CCTC 7 cut(s) 98, 247, 446, 534, 820, 869, 916
Mox20I TGGCCA 1 cut(s) 346
Mph1103I ATGCAT 1 cut(s) 342
MscI TGGCCA 1 cut(s) 346
MseI TTAA 1 cut(s) 836
Msp20I TGGCCA 1 cut(s) 346
MspA1I CMGCKG 2 cut(s) 110, 530
MspI CCGG 3 cut(s) 36, 635, 824
MspR9I CCNGG 6 cut(s) 70, 84, 392, 595, 636, 824
MvaI CCWGG 4 cut(s) 70, 84, 392, 595
MvnI CGCG 2 cut(s) 110, 219
MwoI GCNNNNNNNGC 5 cut(s) 107, 119, 571, 722, 748
NciI CCSGG 2 cut(s) 636, 824
NdeII GATC 6 cut(s) 38, 45, 256, 379, 648, 786
NlaIII CATG 4 cut(s) 263, 648, 688, 896
NlaIV GGNNCC 2 cut(s) 67, 907
NmuCI GTSAC 1 cut(s) 656
NsiI ATGCAT 1 cut(s) 342
PaeR7I CTCGAG 1 cut(s) 456
PagI TCATGA 1 cut(s) 892
PciSI GCTCTTC 1 cut(s) 732
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PfeI GAWTC 2 cut(s) 670, 853
PflMI CCANNNNNTGG 1 cut(s) 246
PfoI TCCNGGA 1 cut(s) 822
PkrI GCNGC 6 cut(s) 109, 112, 283, 312, 532, 564
PleI GAGTC 1 cut(s) 874
PpsI GAGTC 1 cut(s) 874
Ppu21I YACGTR 1 cut(s) 900
PpuMI RGGWCCY 2 cut(s) 66, 294
Psp5II RGGWCCY 2 cut(s) 66, 294
Psp6I CCWGG 4 cut(s) 68, 82, 390, 593
PspGI CCWGG 4 cut(s) 68, 82, 390, 593
PspN4I GGNNCC 2 cut(s) 67, 907
PspPI GGNCC 3 cut(s) 66, 294, 906
PspPPI RGGWCCY 2 cut(s) 66, 294
PspXI VCTCGAGB 1 cut(s) 456
PstNI CAGNNNCTG 1 cut(s) 533
PsuI RGATCY 2 cut(s) 38, 45
PvuII CAGCTG 1 cut(s) 530
RsaI GTAC 2 cut(s) 253, 772
RsaNI GTAC 2 cut(s) 252, 771
SacII CCGCGG 1 cut(s) 111
SapI GCTCTTC 1 cut(s) 732
SaqAI TTAA 1 cut(s) 836
SatI GCNGC 6 cut(s) 108, 111, 282, 311, 531, 563
Sau3AI GATC 6 cut(s) 38, 45, 256, 379, 648, 786
Sau96I GGNCC 3 cut(s) 66, 294, 906
ScaI AGTACT 1 cut(s) 772
SchI GAGTC 1 cut(s) 874
ScrFI CCNGG 6 cut(s) 70, 84, 392, 595, 636, 824
SduI GDGCHC 4 cut(s) 83, 148, 641, 753
SexAI ACCWGGT 1 cut(s) 390
SfaNI GCATC 1 cut(s) 327
SfcI CTRYAG 1 cut(s) 910
Sfr274I CTCGAG 1 cut(s) 456
Sfr303I CCGCGG 1 cut(s) 111
SgrBI CCGCGG 1 cut(s) 111
SinI GGWCC 2 cut(s) 66, 294
SlaI CTCGAG 1 cut(s) 456
SmlI CTYRAG 3 cut(s) 298, 456, 920
SmoI CTYRAG 3 cut(s) 298, 456, 920
SnaBI TACGTA 1 cut(s) 900
Sse9I AATT 5 cut(s) 475, 675, 884, 926, 942
SsiI CCGC 5 cut(s) 5, 108, 110, 219, 281
SspMI CTAG 1 cut(s) 701
StyD4I CCNGG 6 cut(s) 68, 82, 390, 593, 634, 822
TaaI ACNGT 2 cut(s) 495, 755
TaiI ACGT 2 cut(s) 663, 902
TaqI TCGA 3 cut(s) 77, 138, 457
TasI AATT 5 cut(s) 475, 675, 884, 926, 942
TatI WGTACW 2 cut(s) 251, 770
TauI GCSGC 3 cut(s) 110, 113, 284
TfiI GAWTC 2 cut(s) 670, 853
Tru1I TTAA 1 cut(s) 836
Tru9I TTAA 1 cut(s) 836
TscAI CASTG 2 cut(s) 630, 760
TseFI GTSAC 1 cut(s) 656
TseI GCWGC 3 cut(s) 310, 530, 562
Tsp45I GTSAC 1 cut(s) 656
TspDTI ATGAA 3 cut(s) 593, 792, 881
TspRI CASTG 2 cut(s) 630, 760
Van91I CCANNNNNTGG 1 cut(s) 246
VpaK11BI GGWCC 2 cut(s) 66, 294
XagI CCTNNNNNAGG 1 cut(s) 54
XapI RAATTY 1 cut(s) 942
XhoI CTCGAG 1 cut(s) 456
XspI CTAG 1 cut(s) 701
ZraI GACGTC 1 cut(s) 661
ZrmI AGTACT 1 cut(s) 772
Zsp2I ATGCAT 1 cut(s) 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.