Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001859

Physical Location & Seq

Genomic Coordinates Forward (+)

15834766 .. 15837001

Gene Structure 2236 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G37770.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGGCAAATGCGATCACATTTTTCAAGCTCAACACCGGCGCTAAGTTCCCTTCGGTGGGTCTTGGAACATGGCAAGCTTCTCCTGGCCTCGTCGGTGATGCAGTCGCCGCGGCTGTTAAGATTGGCTATCGTCACATTGATTGTGCTCAGATCTATGGCAACGAAAAAGAGATTGGGGCAGTTCTGAAAAAATTGTTTGAAGACAGAGTAGTGAAACGCGAGGATTTGTTCATCACCTCCAAACTCTGGTGTACTGATCATGACCCTCAAGATGTCCCGGAGGCATTGAACAGAACTCTCAAGGATCTGCAGCTTGAATACGTCGATCTTTATCTGATACACTGGCCTGCACGGATAAAGAAAGGTTCTGTTGGAATAAAGCCAGAGAACCTTTTGCCTGTAGATATTCCTAGTACATGGAAAGCGATGGAAGCACTATACGATTCGGGCAAGGCACGAGCCATAGGTGTAAGCAATTTCTCTACCAAGAAACTAGCTGATCTCTTGGAGTTAGCTCGTGTTCCTCCTGCTGTTAATCAGGTCGAATGTCATCCTTCTTGGCGACAAACTAAGCTACAAGAATTCTGCAAATCCAAAGGGGTTCACCTAAGTGTAAGCATTACTCGTCTCACCAATCCATTTACTTTCTACTTTATACATTCATTGAATGATTTTTTTTTTCCAGGCATACTCGCCATTAGGTTCTCCAGGGACAACATGGCTGAAGAGCGATGTTTTGAAGAACCCGATACTGAATATGGTTGCGGAAAAACTCGGAAAGAGTCCTGCGCAAGTCGCCCTTCGTTGGGGACTCCAAATGGGTCACAGTGTGCTTCCCAAGAGTACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0004033 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0008106 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0010035 GO:0016229 GO:0016491 GO:0016614 GO:0016616 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048037 GO:0050661 GO:0050662 GO:0050896 GO:0055114 GO:0070401 GO:0097159 GO:1901265 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00010 ko00040 ko00561 ko00930 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00040 map00561 map00930 map01100 map01110 map01120 map01130 map01220

Pfam Domains

Protein Families

Aldo_ket_red

Protein Analysis

283

Amino Acids

31.68

Weight (kDa)

8.34

Isoelectric Point (pI)

36.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldo_ket_red	PF00248	19 - 285	1.3e-57	Aldo/keto reductase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37770
fragaria_vesca	FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020
malus_domestica	MD12G1150200.v1.1
prunus_persica	Prupe.6G094300_v2.0.a1 Prupe.6G261900_v2.0.a1
pyrus_communis	pycom04g12320 pycom12g14390 pycom12g14400
rosa_chinensis	RchiOBHm_Chr3g0465151 RchiOBHm_Chr3g0465231 RchiOBHm_Chr3g0465271 RchiOBHm_Chr3g0465311
rosa_laevigata	RLG00000024648 RLG00000024651 RLG00000024653
rosa_multiflora	Rmu_co8067008.1_g000001 Rmu_co8210356.1_g000001 Rmu_sc0003386.1_g000008 Rmu_sc0003386.1_g000010 Rmu_sc0003492.1_g000019 Rmu_sc0018026.1_g000002 Rmu_sc0021566.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415190 Rroxscaffold_6G00415200
rosa_rugosa	Rorug03G0075800 Rorug03G0075900 Rorug03G0076000 Rorug03G0076100 Rorug03G0076200 Rorug03G0076200
rosa_samantha	Rh3BG139500 Rh3BG140100 Rh3BG140500 Rh3DG140800 Rh3DG141600
rosa_wichuraiana	Rw3G011420 Rw3G011430 Rw3G011470 Rw3G011490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	790
AccB7I	CCANNNNNTGG	1 cut(s)	246
AccII	CGCG	2 cut(s)	110, 219
AciI	CCGC	3 cut(s)	108, 110, 765
AclWI	GGATC	1 cut(s)	312
AcsI	RAATTY	1 cut(s)	581
AcuI	CTGAAG	1 cut(s)	744
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	3 cut(s)	253, 415, 845
AfiI	CCNNNNNNNGG	5 cut(s)	55, 56, 246, 805, 806
AgsI	TTSAA	6 cut(s)	25, 200, 289, 317, 667, 740
AjnI	CCWGG	3 cut(s)	82, 682, 707
AjuI	GAANNNNNNNTTGG	2 cut(s)	156, 188
AleI	CACNNNNGTG	1 cut(s)	609
AluBI	AGCT	6 cut(s)	28, 77, 313, 497, 515, 574
AluI	AGCT	6 cut(s)	28, 77, 313, 497, 515, 574
Alw21I	GWGCWC	1 cut(s)	148
Alw26I	GTCTC	1 cut(s)	632
AlwI	GGATC	1 cut(s)	312
AoxI	GGCC	2 cut(s)	85, 344
ApeKI	GCWGC	1 cut(s)	310
ApoI	RAATTY	1 cut(s)	581
AspLEI	GCGC	2 cut(s)	41, 791
AsuC2I	CCSGG	1 cut(s)	278
AsuHPI	GGTGA	4 cut(s)	107, 226, 596, 622
BauI	CACGAG	2 cut(s)	456, 516
BbsI	GAAGAC	1 cut(s)	207
Bbv12I	GWGCWC	1 cut(s)	148
BbvI	GCAGC	1 cut(s)	322
BccI	CCATC	1 cut(s)	421
BciT130I	CCWGG	3 cut(s)	84, 684, 709
BclI	TGATCA	1 cut(s)	256
BcnI	CCSGG	1 cut(s)	278
BcoDI	GTCTC	1 cut(s)	632
BfaI	CTAG	2 cut(s)	411, 494
BfmI	CTRYAG	2 cut(s)	308, 399
BfoI	RGCGCY	1 cut(s)	42
BglII	AGATCT	1 cut(s)	150
BisI	GCNGC	3 cut(s)	108, 111, 311
BlsI	GCNGC	3 cut(s)	109, 112, 312
Bme1390I	CCNGG	4 cut(s)	84, 278, 684, 709
BmrFI	CCNGG	4 cut(s)	84, 278, 684, 709
BmsI	GCATC	1 cut(s)	88
BpiI	GAAGAC	1 cut(s)	207
BpmI	CTGGAG	1 cut(s)	691
BpuEI	CTTGAG	2 cut(s)	252, 284
BpuMI	CCSGG	1 cut(s)	278
BsaBI	GATNNNNATC	1 cut(s)	330
BsaJI	CCNNGG	2 cut(s)	108, 708
Bsc4I	CCNNNNNNNGG	5 cut(s)	55, 56, 246, 805, 806
Bse118I	RCCGGY	1 cut(s)	35
Bse1I	ACTGG	1 cut(s)	347
Bse8I	GATNNNNATC	1 cut(s)	330
BseBI	CCWGG	3 cut(s)	84, 684, 709
BseDI	CCNNGG	2 cut(s)	108, 708
BseGI	GGATG	1 cut(s)	550
BseJI	GATNNNNATC	1 cut(s)	330
BseLI	CCNNNNNNNGG	5 cut(s)	55, 56, 246, 805, 806
BseMII	CTCAG	1 cut(s)	161
BseNI	ACTGG	1 cut(s)	347
BseXI	GCAGC	1 cut(s)	322
BsgI	GTGCAG	1 cut(s)	333
Bsh1236I	CGCG	2 cut(s)	110, 219
BshFI	GGCC	2 cut(s)	87, 346
BsiHKAI	GWGCWC	1 cut(s)	148
BsiSI	CCGG	2 cut(s)	36, 278
BslFI	GGGAC	3 cut(s)	260, 725, 823
BslI	CCNNNNNNNGG	5 cut(s)	55, 56, 246, 805, 806
BsmAI	GTCTC	1 cut(s)	632
BsmBI	CGTCTC	1 cut(s)	632
BsmFI	GGGAC	3 cut(s)	260, 725, 823
BsnI	GGCC	2 cut(s)	87, 346
Bsp1286I	GDGCHC	1 cut(s)	148
Bsp143I	GATC	6 cut(s)	12, 150, 256, 304, 325, 499
BspACI	CCGC	3 cut(s)	108, 110, 765
BspANI	GGCC	2 cut(s)	87, 346
BspCNI	CTCAG	1 cut(s)	160
BspFNI	CGCG	2 cut(s)	110, 219
BspHI	TCATGA	1 cut(s)	259
BspMAI	CTGCAG	1 cut(s)	312
BspPI	GGATC	1 cut(s)	312
BspQI	GCTCTTC	1 cut(s)	720
BsrFI	RCCGGY	1 cut(s)	35
BsrI	ACTGG	1 cut(s)	347
BssAI	RCCGGY	1 cut(s)	35
BssECI	CCNNGG	2 cut(s)	108, 708
BssMI	GATC	6 cut(s)	12, 150, 256, 304, 325, 499
BssSI	CACGAG	2 cut(s)	456, 516
Bst2BI	CACGAG	2 cut(s)	456, 516
Bst2UI	CCWGG	3 cut(s)	84, 684, 709
Bst4CI	ACNGT	1 cut(s)	828
Bst6I	CTCTTC	1 cut(s)	720
BstC8I	GCNNGC	2 cut(s)	75, 348
BstDEI	CTNAG	4 cut(s)	42, 147, 570, 608
BstDSI	CCRYGG	1 cut(s)	108
BstF5I	GGATG	1 cut(s)	550
BstFNI	CGCG	2 cut(s)	110, 219
BstH2I	RGCGCY	1 cut(s)	42
BstHHI	GCGC	2 cut(s)	41, 791
BstKTI	GATC	6 cut(s)	15, 153, 259, 307, 328, 502
BstMAI	GTCTC	1 cut(s)	632
BstMBI	GATC	6 cut(s)	12, 150, 256, 304, 325, 499
BstMWI	GCNNNNNNNGC	3 cut(s)	107, 431, 795
BstNI	CCWGG	3 cut(s)	84, 684, 709
BstSCI	CCNGG	4 cut(s)	82, 276, 682, 707
BstSFI	CTRYAG	2 cut(s)	308, 399
BstUI	CGCG	2 cut(s)	110, 219
BstV1I	GCAGC	1 cut(s)	322
BstV2I	GAAGAC	1 cut(s)	207
BstX2I	RGATCY	2 cut(s)	150, 304
BstYI	RGATCY	2 cut(s)	150, 304
BsuRI	GGCC	2 cut(s)	87, 346
BtgI	CCRYGG	1 cut(s)	108
BtgZI	GCGATG	2 cut(s)	440, 745
BtsCI	GGATG	1 cut(s)	550
BtsIMutI	CAGTG	2 cut(s)	340, 833
Cac8I	GCNNGC	2 cut(s)	75, 348
CciI	TCATGA	1 cut(s)	259
CfoI	GCGC	2 cut(s)	41, 791
Cfr10I	RCCGGY	1 cut(s)	35
Cfr42I	CCGCGG	1 cut(s)	111
Csp6I	GTAC	3 cut(s)	252, 414, 844
CviAII	CATG	4 cut(s)	69, 260, 417, 718
CviQI	GTAC	3 cut(s)	252, 414, 844
DdeI	CTNAG	4 cut(s)	42, 147, 570, 608
DpnI	GATC	6 cut(s)	14, 152, 258, 306, 327, 501
DpnII	GATC	6 cut(s)	12, 150, 256, 304, 325, 499
DraIII	CACNNNGTG	1 cut(s)	830
Eam1104I	CTCTTC	1 cut(s)	720
EarI	CTCTTC	1 cut(s)	720
Eco57I	CTGAAG	1 cut(s)	744
EcoRI	GAATTC	1 cut(s)	581
EcoRII	CCWGG	3 cut(s)	82, 682, 707
Esp3I	CGTCTC	1 cut(s)	632
FaeI	CATG	4 cut(s)	72, 263, 420, 721
FalI	AAGNNNNNCTT	2 cut(s)	784, 816
FaqI	GGGAC	3 cut(s)	260, 725, 823
FatI	CATG	4 cut(s)	68, 259, 416, 717
FbaI	TGATCA	1 cut(s)	256
Fnu4HI	GCNGC	3 cut(s)	108, 111, 311
FokI	GGATG	1 cut(s)	537
Fsp4HI	GCNGC	3 cut(s)	108, 111, 311
FspBI	CTAG	2 cut(s)	411, 494
FspI	TGCGCA	1 cut(s)	790
GlaI	GCGC	2 cut(s)	40, 790
GluI	GCNGC	3 cut(s)	108, 111, 311
GsuI	CTGGAG	1 cut(s)	691
HaeII	RGCGCY	1 cut(s)	42
HaeIII	GGCC	2 cut(s)	87, 346
HapII	CCGG	2 cut(s)	36, 278
HhaI	GCGC	2 cut(s)	41, 791
Hin1II	CATG	4 cut(s)	72, 263, 420, 721
Hin6I	GCGC	2 cut(s)	39, 789
HinP1I	GCGC	2 cut(s)	39, 789
HindIII	AAGCTT	1 cut(s)	75
HinfI	GANTC	3 cut(s)	443, 782, 811
HpaII	CCGG	2 cut(s)	36, 278
HphI	GGTGA	4 cut(s)	107, 226, 596, 622
Hpy166II	GTNNAC	2 cut(s)	252, 604
Hpy188I	TCNGA	4 cut(s)	150, 186, 336, 777
Hpy188III	TCNNGA	2 cut(s)	260, 269
Hpy8I	GTNNAC	2 cut(s)	252, 604
Hpy99I	CGWCG	2 cut(s)	95, 326
HpyAV	CCTTC	3 cut(s)	60, 564, 810
HpyCH4III	ACNGT	1 cut(s)	828
HpyCH4IV	ACGT	1 cut(s)	321
HpyCH4V	TGCA	4 cut(s)	101, 310, 350, 588
HpyF10VI	GCNNNNNNNGC	3 cut(s)	107, 431, 795
HpyF3I	CTNAG	4 cut(s)	42, 147, 570, 608
HpySE526I	ACGT	1 cut(s)	321
Hsp92II	CATG	4 cut(s)	72, 263, 420, 721
HspAI	GCGC	2 cut(s)	39, 789
Ksp22I	TGATCA	1 cut(s)	256
KspI	CCGCGG	1 cut(s)	111
Kzo9I	GATC	6 cut(s)	12, 150, 256, 304, 325, 499
LguI	GCTCTTC	1 cut(s)	720
Lsp1109I	GCAGC	1 cut(s)	322
LweI	GCATC	1 cut(s)	88
MaeI	CTAG	2 cut(s)	411, 494
MaeII	ACGT	1 cut(s)	321
MaeIII	GTNAC	2 cut(s)	131, 822
MalI	GATC	6 cut(s)	14, 152, 258, 306, 327, 501
MboI	GATC	6 cut(s)	12, 150, 256, 304, 325, 499
MboII	GAAGA	3 cut(s)	212, 737, 752
MflI	RGATCY	2 cut(s)	150, 304
MhlI	GDGCHC	1 cut(s)	148
MluCI	AATT	3 cut(s)	191, 475, 581
MlyI	GAGTC	2 cut(s)	791, 805
MmeI	TCCRAC	1 cut(s)	352
MnlI	CCTC	6 cut(s)	98, 214, 247, 274, 276, 534
MseI	TTAA	2 cut(s)	117, 534
MslI	CAYNNNNRTG	1 cut(s)	609
MspA1I	CMGCKG	1 cut(s)	110
MspI	CCGG	2 cut(s)	36, 278
MspR9I	CCNGG	4 cut(s)	84, 278, 684, 709
MvaI	CCWGG	3 cut(s)	84, 684, 709
MvnI	CGCG	2 cut(s)	110, 219
MwoI	GCNNNNNNNGC	3 cut(s)	107, 431, 795
NciI	CCSGG	1 cut(s)	278
NdeII	GATC	6 cut(s)	12, 150, 256, 304, 325, 499
NlaIII	CATG	4 cut(s)	72, 263, 420, 721
NmuCI	GTSAC	2 cut(s)	131, 822
NsbI	TGCGCA	1 cut(s)	790
OliI	CACNNNNGTG	1 cut(s)	609
PagI	TCATGA	1 cut(s)	259
PciSI	GCTCTTC	1 cut(s)	720
PfeI	GAWTC	1 cut(s)	443
PflMI	CCANNNNNTGG	1 cut(s)	246
PfoI	TCCNGGA	1 cut(s)	276
PkrI	GCNGC	3 cut(s)	109, 112, 312
PleI	GAGTC	2 cut(s)	790, 805
PpsI	GAGTC	2 cut(s)	790, 805
Psp6I	CCWGG	3 cut(s)	82, 682, 707
PspGI	CCWGG	3 cut(s)	82, 682, 707
PstI	CTGCAG	1 cut(s)	312
PsuI	RGATCY	2 cut(s)	150, 304
RsaI	GTAC	3 cut(s)	253, 415, 845
RsaNI	GTAC	3 cut(s)	252, 414, 844
RseI	CAYNNNNRTG	1 cut(s)	609
SacII	CCGCGG	1 cut(s)	111
SapI	GCTCTTC	1 cut(s)	720
SaqAI	TTAA	2 cut(s)	117, 534
SatI	GCNGC	3 cut(s)	108, 111, 311
Sau3AI	GATC	6 cut(s)	12, 150, 256, 304, 325, 499
SchI	GAGTC	2 cut(s)	791, 805
ScrFI	CCNGG	4 cut(s)	84, 278, 684, 709
SduI	GDGCHC	1 cut(s)	148
SfaNI	GCATC	1 cut(s)	88
SfcI	CTRYAG	2 cut(s)	308, 399
Sfr303I	CCGCGG	1 cut(s)	111
SgrAI	CRCCGGYG	1 cut(s)	35
SgrBI	CCGCGG	1 cut(s)	111
SmiMI	CAYNNNNRTG	1 cut(s)	609
SmlI	CTYRAG	2 cut(s)	267, 299
SmoI	CTYRAG	2 cut(s)	267, 299
Sse9I	AATT	3 cut(s)	191, 475, 581
SsiI	CCGC	3 cut(s)	108, 110, 765
SspMI	CTAG	2 cut(s)	411, 494
StyD4I	CCNGG	4 cut(s)	82, 276, 682, 707
TaaI	ACNGT	1 cut(s)	828
TaiI	ACGT	1 cut(s)	324
TaqI	TCGA	2 cut(s)	324, 543
TasI	AATT	3 cut(s)	191, 475, 581
TatI	WGTACW	3 cut(s)	251, 413, 843
TauI	GCSGC	2 cut(s)	110, 113
TfiI	GAWTC	1 cut(s)	443
Tru1I	TTAA	2 cut(s)	117, 534
Tru9I	TTAA	2 cut(s)	117, 534
TscAI	CASTG	2 cut(s)	347, 833
TseFI	GTSAC	2 cut(s)	131, 822
TseI	GCWGC	1 cut(s)	310
Tsp45I	GTSAC	2 cut(s)	131, 822
TspDTI	ATGAA	2 cut(s)	220, 651
TspGWI	ACGGA	1 cut(s)	367
TspRI	CASTG	2 cut(s)	347, 833
Van91I	CCANNNNNTGG	1 cut(s)	246
XapI	RAATTY	1 cut(s)	581
XcmI	CCANNNNNNNNNTGG	1 cut(s)	715
XspI	CTAG	2 cut(s)	411, 494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.