Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001859

Physical Location & Seq

Genomic Coordinates Forward (+)

5918248 .. 5920047

Gene Structure 1800 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0075800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGCATCCCGTACTTCAAATTCTCCACAGAAGCAAACAGATTGTGAGGACTCTTTGCTCTTTAAGTTGCATACCCAGAAATCCCACATCGGAAAAATTGAATCTTCCACTGGTTTCAGAGCTATTAGCAAAGCAGAGGTGGTCAGAGCTCAGAACCCATCTCAAAGACTCGGACTTTACCTCAGTTTTTCATCAGGTTTTGGATTCTGGAGCAGACCCAGTACTGATACTCAGGTACTTACATTGTTGCCAGAAGGAATTCAATGCTGCACATAATCTAGAACTCACTTTTAGACTCTTGGGTTCATTAGCAATAGCCAAAAGGTACTCAAAGATTAGAGCTTTTTTACATGGGTTCGTTAGAAGCAATGAAAAGCTATCAAATTCTGCAATTTTTAACTCGCTTTCGTTGGGTAGTAAACATTTGGCTGCAAATTCCATTATTGTTAACTTGTTGGTGTTGGCATATGCGAAAAATTTGAAGACCCATTTGGGTGTTGAAGCATTTCAGAAAGCCGGTGATTATGGGTTTAAGTTGGTGGTGTTTTCTTGTAACCCTTTGTTAAGGGCTTTGGTGAAGGAAGGTGAAATTGGGAATGTTGAATTTGTTTACAGGGGGATGATTAGGAGGAGAATTAGGCCCAATTTGTACACTTTTAATATGGTGATTAGGGGGTTGTGTAAAGTTGGGAAATTGGAGGAGGCAAAGGATGTTATTATTAATGACATGAAGGCTTGGGGGATATCACCAAATGTGGTTAGTTATAATACTTTGATTGATGGGTATTGCAAGTTGGGTGGGTTGGGGAAGATGTACAAAGCTGATGCGATTGTGAAGGAAATGATGGCAAATAGTATTCGGCCGAATAAGTGTACTTACAATATTTTGATTAGTGGCTTTGGTAAAGATGAGAATGTACCAGCTGCGGTCAAAGTTTTTGAGGCGATAACGAAGCAGGATTTGAAACCAGATGAGTTTACATGGTGTTCACTGATTAATGGGTTGTGCTGCAGTGGTGAGCTTGACAAGGCTTGCGATTTGCTGGGGGAAATGCGTGGCTTGGGTTTGAAGCCAAATGTTATTACGTACAATGCACTTATTAATGGGTTTTGTAAGAAGAAGATGATGAAGAGAGCTAGAGAGTTATTCGAAGACATTGGCAGACAAGGCTTGGAGCCGAGTGTTATTACGTACAATACACTAATTGATGCTTACTCCAAGGATGGGATGATGGAGGAAGCATATGAGGTGTATAATTCAATGTTAGAGAGAGGAGTTTCCCCAAACACTTCGACCTTCAACTGCCGGATTGCTGGTTTGTGCAGACAGGGAAACATGGAGATGGCCATGAAGCTTTTACATGAAATGGAGGTTGATGGCTTGAGAGCTGATCGCATAACATATAACACGTTAATAGATGGATTGTGCAAAGAAGGGAAGTCAAGAAAGGCAGGAACTCTCTTGGATGAGATGTTCAAGAAGCGTTTGAGTCCAAATCACTTGACATACAATTTTTTGATGGATGGATACTGCAGGGAAGGAAACCTCAGTGCAGCTTTGAATCTGAGGGCACTGATGGAGAAAGGAGGGAAGCGACCAAATACTGCAACATATAATGCGTTGATCAAGGGATATTCTAAGAAGGACAAGCTTGAAGATGCAAATGGGCTTCTTAATGAAATGTTGGAGAAGGGGTTGGTCCCAAACCAAACTACTTACAAAATAGTAAAAGAGGAAATGATGAAGAAAGGTTTTGTTCCTGATATAGATTGGCACCTGTATAATATCTCTAGCTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0004033 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0008106 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0010035 GO:0016229 GO:0016491 GO:0016614 GO:0016616 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048037 GO:0050661 GO:0050662 GO:0050896 GO:0055114 GO:0070401 GO:0097159 GO:1901265 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00010 ko00040 ko00561 ko00930 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00040 map00561 map00930 map01100 map01110 map01120 map01130 map01220

Pfam Domains

Protein Families

Aldo_ket_red

Protein Analysis

599

Amino Acids

67.41

Weight (kDa)

9.15

Isoelectric Point (pI)

29.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	181 - 228	3.4e-09	PPR repeat family
PPR_1	PF12854	212 - 238	1.3e-07	PPR repeat
PPR_2	PF13041	218 - 264	3.4e-15	PPR repeat family
PPR_3	PF13812	239 - 302	2.7e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	246 - 266	3e-08	PPR repeat
PPR_2	PF13041	269 - 302	6.2e-06	PPR repeat family
PPR_long	PF17177	279 - 407	4e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	286 - 314	2.4e-06	PPR repeat
PPR_2	PF13041	288 - 336	1.8e-12	PPR repeat family
PPR_3	PF13812	312 - 370	6.4e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	320 - 352	4.5e-11	PPR repeat
PPR	PF01535	326 - 356	3.1e-07	PPR repeat
PPR_2	PF13041	330 - 372	3.1e-13	PPR repeat family
PPR_1	PF12854	355 - 385	6.8e-12	PPR repeat
PPR_2	PF13041	358 - 404	3.6e-16	PPR repeat family
PPR	PF01535	361 - 390	5.4e-07	PPR repeat
PPR_long	PF17177	376 - 502	3.1e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	382 - 435	7.4e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	390 - 421	2e-10	PPR repeat
PPR_2	PF13041	393 - 435	1.1e-15	PPR repeat family
PPR	PF01535	396 - 426	1.5e-10	PPR repeat
PPR_1	PF12854	424 - 457	4.6e-09	PPR repeat
PPR_2	PF13041	428 - 477	2.3e-16	PPR repeat family
PPR	PF01535	431 - 461	1.7e-06	PPR repeat
PPR_3	PF13812	451 - 510	2.8e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	460 - 491	1.9e-10	PPR repeat
PPR_2	PF13041	464 - 512	9.6e-17	PPR repeat family
PPR	PF01535	466 - 495	2.5e-07	PPR repeat
PPR_1	PF12854	495 - 526	7.7e-08	PPR repeat
PPR_2	PF13041	502 - 547	8.2e-13	PPR repeat family
PPR_1	PF12854	532 - 561	8.4e-07	PPR repeat
PPR_2	PF13041	533 - 575	9.3e-14	PPR repeat family
PPR	PF01535	537 - 566	5.1e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37770
fragaria_vesca	FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020 FvH4_6g13020
malus_domestica	MD12G1150200.v1.1
prunus_persica	Prupe.6G094300_v2.0.a1 Prupe.6G261900_v2.0.a1
pyrus_communis	pycom04g12320 pycom12g14390 pycom12g14400
rosa_chinensis	RchiOBHm_Chr3g0465151 RchiOBHm_Chr3g0465231 RchiOBHm_Chr3g0465271 RchiOBHm_Chr3g0465311
rosa_laevigata	RLG00000024648 RLG00000024651 RLG00000024653
rosa_multiflora	Rmu_co8067008.1_g000001 Rmu_co8210356.1_g000001 Rmu_sc0003386.1_g000008 Rmu_sc0003386.1_g000010 Rmu_sc0003492.1_g000019 Rmu_sc0018026.1_g000002 Rmu_sc0021566.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415190 Rroxscaffold_6G00415200
rosa_rugosa	Rorug03G0075800 Rorug03G0075900 Rorug03G0076000 Rorug03G0076100 Rorug03G0076200 Rorug03G0076200
rosa_samantha	Rh3BG139500 Rh3BG140100 Rh3BG140500 Rh3DG140800 Rh3DG141600
rosa_wichuraiana	Rw3G011420 Rw3G011430 Rw3G011470 Rw3G011490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	765
AccB1I	GGYRCC	1 cut(s)	1773
AciI	CCGC	1 cut(s)	926
AcoI	YGGCCR	2 cut(s)	860, 1344
AcsI	RAATTY	6 cut(s)	18, 257, 382, 433, 475, 602
AfiI	CCNNNNNNNGG	1 cut(s)	1224
AflIII	ACRYGT	1 cut(s)	1407
AjuI	GAANNNNNNNTTGG	4 cut(s)	473, 505, 573, 605
AloI	GAACNNNNNNTCC	2 cut(s)	1457, 1489
Alw21I	GWGCWC	1 cut(s)	150
AoxI	GGCC	3 cut(s)	638, 860, 1344
ApeKI	GCWGC	5 cut(s)	266, 428, 923, 1008, 1553
ApoI	RAATTY	6 cut(s)	18, 257, 382, 433, 475, 602
AseI	ATTAAT	3 cut(s)	720, 996, 1101
Asp700I	GAANNNNTTC	2 cut(s)	257, 504
AspS9I	GGNCC	2 cut(s)	639, 1699
AsuHPI	GGTGA	6 cut(s)	530, 586, 596, 676, 738, 1028
AsuII	TTCGAA	1 cut(s)	1149
AvaII	GGWCC	1 cut(s)	1699
BaeGI	GKGCMC	1 cut(s)	1573
BaeI	ACNNNNGTAYC	2 cut(s)	218, 251
BalI	TGGCCA	1 cut(s)	1346
BanI	GGYRCC	1 cut(s)	1773
BanII	GRGCYC	1 cut(s)	150
BbsI	GAAGAC	2 cut(s)	488, 1158
Bbv12I	GWGCWC	1 cut(s)	150
BbvI	GCAGC	5 cut(s)	253, 415, 910, 995, 1565
BciVI	GTATCC	1 cut(s)	1520
BclI	TGATCA	1 cut(s)	1623
BfaI	CTAG	3 cut(s)	278, 1137, 1791
BfmI	CTRYAG	2 cut(s)	1009, 1531
BfuI	GTATCC	1 cut(s)	1520
BisI	GCNGC	5 cut(s)	267, 429, 924, 1009, 1554
BlsI	GCNGC	5 cut(s)	268, 430, 925, 1010, 1555
BmcAI	AGTACT	1 cut(s)	222
Bme18I	GGWCC	1 cut(s)	1699
BmgT120I	GGNCC	2 cut(s)	639, 1699
BmiI	GGNNCC	3 cut(s)	1176, 1701, 1775
BmrI	ACTGGG	1 cut(s)	212
BmsI	GCATC	4 cut(s)	13, 814, 1198, 1648
BmuI	ACTGGG	1 cut(s)	212
BpiI	GAAGAC	2 cut(s)	488, 1158
BpmI	CTGGAG	1 cut(s)	228
Bpu14I	TTCGAA	1 cut(s)	1149
BpuEI	CTTGAG	1 cut(s)	1402
BsaAI	YACGTR	2 cut(s)	1086, 1191
BsaJI	CCNNGG	1 cut(s)	1218
BsaXI	ACNNNNNCTCC	2 cut(s)	1679, 1709
Bsc4I	CCNNNNNNNGG	1 cut(s)	1224
Bse118I	RCCGGY	1 cut(s)	515
Bse1I	ACTGG	2 cut(s)	114, 218
Bse3DI	GCAATG	1 cut(s)	373
BseDI	CCNNGG	1 cut(s)	1218
BseGI	GGATG	7 cut(s)	4, 624, 715, 1228, 1233, 1471, 1528
BseLI	CCNNNNNNNGG	1 cut(s)	1224
BseMI	GCAATG	1 cut(s)	373
BseMII	CTCAG	5 cut(s)	163, 195, 244, 1556, 1561
BseNI	ACTGG	2 cut(s)	114, 218
BseRI	GAGGAG	3 cut(s)	643, 713, 1287
BseSI	GKGCMC	1 cut(s)	1573
BseX3I	CGGCCG	1 cut(s)	860
BseXI	GCAGC	5 cut(s)	253, 415, 910, 995, 1565
BseYI	CCCAGC	1 cut(s)	1042
BsgI	GTGCAG	3 cut(s)	252, 1342, 1572
Bsh1285I	CGRYCG	1 cut(s)	863
BshFI	GGCC	3 cut(s)	640, 862, 1346
BshNI	GGYRCC	1 cut(s)	1773
BsiEI	CGRYCG	1 cut(s)	863
BsiHKAI	GWGCWC	1 cut(s)	150
BsiSI	CCGG	2 cut(s)	516, 1306
BslFI	GGGAC	1 cut(s)	1685
BslI	CCNNNNNNNGG	1 cut(s)	1224
BsmFI	GGGAC	1 cut(s)	1685
BsnI	GGCC	3 cut(s)	640, 862, 1346
Bsp119I	TTCGAA	1 cut(s)	1149
Bsp1286I	GDGCHC	2 cut(s)	150, 1573
Bsp1407I	TGTACA	2 cut(s)	648, 813
Bsp143I	GATC	2 cut(s)	1390, 1623
BspACI	CCGC	1 cut(s)	926
BspANI	GGCC	3 cut(s)	640, 862, 1346
BspCNI	CTCAG	5 cut(s)	162, 194, 243, 1557, 1560
BspLI	GGNNCC	3 cut(s)	1176, 1701, 1775
BspMAI	CTGCAG	2 cut(s)	1013, 1535
BspT104I	TTCGAA	1 cut(s)	1149
BspT107I	GGYRCC	1 cut(s)	1773
BsrDI	GCAATG	1 cut(s)	373
BsrFI	RCCGGY	1 cut(s)	515
BsrGI	TGTACA	2 cut(s)	648, 813
BsrI	ACTGG	2 cut(s)	114, 218
BssAI	RCCGGY	1 cut(s)	515
BssECI	CCNNGG	1 cut(s)	1218
BssMI	GATC	2 cut(s)	1390, 1623
BssT1I	CCWWGG	1 cut(s)	1218
Bst6I	CTCTTC	1 cut(s)	1124
BstAUI	TGTACA	2 cut(s)	648, 813
BstBAI	YACGTR	2 cut(s)	1086, 1191
BstBI	TTCGAA	1 cut(s)	1149
BstC8I	GCNNGC	1 cut(s)	1033
BstDEI	CTNAG	7 cut(s)	149, 181, 230, 1547, 1565, 1638, 1797
BstF5I	GGATG	7 cut(s)	4, 624, 715, 1228, 1233, 1471, 1528
BstKTI	GATC	2 cut(s)	1393, 1626
BstMBI	GATC	2 cut(s)	1390, 1623
BstMCI	CGRYCG	1 cut(s)	863
BstMWI	GCNNNNNNNGC	1 cut(s)	1167
BstSFI	CTRYAG	2 cut(s)	1009, 1531
BstSLI	GKGCMC	1 cut(s)	1573
BstSNI	TACGTA	2 cut(s)	1086, 1191
BstV1I	GCAGC	5 cut(s)	253, 415, 910, 995, 1565
BstV2I	GAAGAC	2 cut(s)	488, 1158
BstZI	CGGCCG	1 cut(s)	860
BsuI	GTATCC	1 cut(s)	1520
BsuRI	GGCC	3 cut(s)	640, 862, 1346
BtsCI	GGATG	7 cut(s)	4, 624, 715, 1228, 1233, 1471, 1528
BtsI	GCAGTG	1 cut(s)	1018
BtsIMutI	CAGTG	5 cut(s)	107, 989, 1018, 1555, 1571
Cac8I	GCNNGC	1 cut(s)	1033
Cfr10I	RCCGGY	1 cut(s)	515
Cfr13I	GGNCC	2 cut(s)	639, 1699
CspCI	CAANNNNNGTGG	2 cut(s)	778, 813
CviAII	CATG	6 cut(s)	350, 727, 981, 1336, 1348, 1361
DdeI	CTNAG	7 cut(s)	149, 181, 230, 1547, 1565, 1638, 1797
DpnI	GATC	2 cut(s)	1392, 1625
DpnII	GATC	2 cut(s)	1390, 1623
EaeI	YGGCCR	2 cut(s)	860, 1344
EagI	CGGCCG	1 cut(s)	860
Eam1104I	CTCTTC	1 cut(s)	1124
EarI	CTCTTC	1 cut(s)	1124
Ecl136II	GAGCTC	1 cut(s)	148
EclXI	CGGCCG	1 cut(s)	860
Eco105I	TACGTA	2 cut(s)	1086, 1191
Eco130I	CCWWGG	1 cut(s)	1218
Eco24I	GRGCYC	1 cut(s)	150
Eco32I	GATATC	1 cut(s)	744
Eco47I	GGWCC	1 cut(s)	1699
Eco52I	CGGCCG	1 cut(s)	860
Eco53kI	GAGCTC	1 cut(s)	148
EcoICRI	GAGCTC	1 cut(s)	148
EcoRI	GAATTC	1 cut(s)	257
EcoRV	GATATC	1 cut(s)	744
EcoT14I	CCWWGG	1 cut(s)	1218
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	150
ErhI	CCWWGG	1 cut(s)	1218
FaeI	CATG	6 cut(s)	353, 730, 984, 1339, 1351, 1364
FaqI	GGGAC	1 cut(s)	1685
FatI	CATG	6 cut(s)	349, 726, 980, 1335, 1347, 1360
FauNDI	CATATG	2 cut(s)	466, 1243
FbaI	TGATCA	1 cut(s)	1623
Fnu4HI	GCNGC	5 cut(s)	267, 429, 924, 1009, 1554
FokI	GGATG	6 cut(s)	631, 722, 1235, 1240, 1478, 1535
FriOI	GRGCYC	1 cut(s)	150
Fsp4HI	GCNGC	5 cut(s)	267, 429, 924, 1009, 1554
FspBI	CTAG	3 cut(s)	278, 1137, 1791
GluI	GCNGC	5 cut(s)	267, 429, 924, 1009, 1554
GsaI	CCCAGC	1 cut(s)	1046
GsuI	CTGGAG	1 cut(s)	228
HaeIII	GGCC	3 cut(s)	640, 862, 1346
HapII	CCGG	2 cut(s)	516, 1306
Hin1II	CATG	6 cut(s)	353, 730, 984, 1339, 1351, 1364
HincII	GTYRAC	1 cut(s)	448
HindII	GTYRAC	1 cut(s)	448
HindIII	AAGCTT	2 cut(s)	1352, 1649
HinfI	GANTC	7 cut(s)	49, 100, 167, 203, 294, 1489, 1561
HpaI	GTTAAC	1 cut(s)	448
HpaII	CCGG	2 cut(s)	516, 1306
HphI	GGTGA	6 cut(s)	530, 586, 596, 676, 738, 1028
Hpy166II	GTNNAC	7 cut(s)	419, 448, 610, 651, 873, 978, 989
Hpy188I	TCNGA	7 cut(s)	91, 118, 145, 152, 172, 510, 1566
Hpy188III	TCNNGA	5 cut(s)	207, 278, 1443, 1477, 1760
Hpy8I	GTNNAC	7 cut(s)	419, 448, 610, 651, 873, 978, 989
HpyCH4IV	ACGT	3 cut(s)	1085, 1190, 1409
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1167
HpyF3I	CTNAG	7 cut(s)	149, 181, 230, 1547, 1565, 1638, 1797
HpySE526I	ACGT	3 cut(s)	1085, 1190, 1409
Hsp92II	CATG	6 cut(s)	353, 730, 984, 1339, 1351, 1364
Ksp22I	TGATCA	1 cut(s)	1623
KspAI	GTTAAC	1 cut(s)	448
Kzo9I	GATC	2 cut(s)	1390, 1623
LmnI	GCTCC	2 cut(s)	209, 1174
Lsp1109I	GCAGC	5 cut(s)	253, 415, 910, 995, 1565
LweI	GCATC	4 cut(s)	13, 814, 1198, 1648
MaeI	CTAG	3 cut(s)	278, 1137, 1791
MaeII	ACGT	3 cut(s)	1085, 1190, 1409
MaeIII	GTNAC	1 cut(s)	551
MalI	GATC	2 cut(s)	1392, 1625
MboI	GATC	2 cut(s)	1390, 1623
MboII	GAAGA	9 cut(s)	95, 493, 820, 1129, 1132, 1141, 1163, 1667, 1756
MhlI	GDGCHC	2 cut(s)	150, 1573
MlsI	TGGCCA	1 cut(s)	1346
MluNI	TGGCCA	1 cut(s)	1346
MlyI	GAGTC	4 cut(s)	43, 161, 288, 1498
MmeI	TCCRAC	1 cut(s)	1665
Mox20I	TGGCCA	1 cut(s)	1346
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	257, 504
MscI	TGGCCA	1 cut(s)	1346
MslI	CAYNNNNRTG	2 cut(s)	492, 1340
Msp20I	TGGCCA	1 cut(s)	1346
MspA1I	CMGCKG	1 cut(s)	923
MspI	CCGG	2 cut(s)	516, 1306
MwoI	GCNNNNNNNGC	1 cut(s)	1167
NdeI	CATATG	2 cut(s)	466, 1243
NdeII	GATC	2 cut(s)	1390, 1623
NlaIII	CATG	6 cut(s)	353, 730, 984, 1339, 1351, 1364
NlaIV	GGNNCC	3 cut(s)	1176, 1701, 1775
NmeAIII	GCCGAG	1 cut(s)	1203
NsiI	ATGCAT	1 cut(s)	6
NspV	TTCGAA	1 cut(s)	1149
PdmI	GAANNNNTTC	2 cut(s)	257, 504
PfeI	GAWTC	3 cut(s)	100, 203, 1561
PkrI	GCNGC	5 cut(s)	268, 430, 925, 1010, 1555
PleI	GAGTC	4 cut(s)	43, 161, 288, 1497
PpsI	GAGTC	4 cut(s)	43, 161, 288, 1497
Ppu21I	YACGTR	2 cut(s)	1086, 1191
PshBI	ATTAAT	3 cut(s)	720, 996, 1101
PsiI	TTATAA	1 cut(s)	765
Psp124BI	GAGCTC	1 cut(s)	150
PspFI	CCCAGC	1 cut(s)	1042
PspN4I	GGNNCC	3 cut(s)	1176, 1701, 1775
PspPI	GGNCC	2 cut(s)	639, 1699
PstI	CTGCAG	2 cut(s)	1013, 1535
PvuII	CAGCTG	1 cut(s)	923
RseI	CAYNNNNRTG	2 cut(s)	492, 1340
SacI	GAGCTC	1 cut(s)	150
SatI	GCNGC	5 cut(s)	267, 429, 924, 1009, 1554
Sau3AI	GATC	2 cut(s)	1390, 1623
Sau96I	GGNCC	2 cut(s)	639, 1699
ScaI	AGTACT	1 cut(s)	222
SchI	GAGTC	4 cut(s)	43, 161, 288, 1498
SduI	GDGCHC	2 cut(s)	150, 1573
SfaNI	GCATC	4 cut(s)	13, 814, 1198, 1648
SfcI	CTRYAG	2 cut(s)	1009, 1531
SfuI	TTCGAA	1 cut(s)	1149
SinI	GGWCC	1 cut(s)	1699
SmiMI	CAYNNNNRTG	2 cut(s)	492, 1340
SmlI	CTYRAG	1 cut(s)	1381
SmoI	CTYRAG	1 cut(s)	1381
SnaBI	TACGTA	2 cut(s)	1086, 1191
SsiI	CCGC	1 cut(s)	926
SspI	AATATT	1 cut(s)	883
SspMI	CTAG	3 cut(s)	278, 1137, 1791
SstI	GAGCTC	1 cut(s)	150
StyI	CCWWGG	1 cut(s)	1218
TaiI	ACGT	3 cut(s)	1088, 1193, 1412
TaqI	TCGA	2 cut(s)	1149, 1292
TatI	WGTACW	4 cut(s)	220, 648, 813, 872
TfiI	GAWTC	3 cut(s)	100, 203, 1561
TscAI	CASTG	5 cut(s)	114, 996, 1018, 1555, 1578
TseI	GCWGC	5 cut(s)	266, 428, 923, 1008, 1553
TspDTI	ATGAA	9 cut(s)	179, 294, 384, 743, 1142, 1364, 1377, 1692, 1757
TspRI	CASTG	5 cut(s)	114, 996, 1018, 1555, 1578
VpaK11BI	GGWCC	1 cut(s)	1699
VspI	ATTAAT	3 cut(s)	720, 996, 1101
XapI	RAATTY	6 cut(s)	18, 257, 382, 433, 475, 602
XbaI	TCTAGA	1 cut(s)	277
XmnI	GAANNNNTTC	2 cut(s)	257, 504
XspI	CTAG	3 cut(s)	278, 1137, 1791
ZrmI	AGTACT	1 cut(s)	222
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.