RLG00000024648

Aldo-keto reductase family 4 member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
37843926 .. 37850961
7036 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024648

Sequence Viewer

Length: 1443 bp
ATGGCGGACGATATTCGTTTCTTTGAGTTAAACACCGGAGCCAAGATGCCTTCTTTGGGCTTAGGGACCTGGCAGTCCAGCCCCGGCTTGGTCGGTGAAGCCGTCGCCACTGCCATCAAGATCCACTGGCCAGTGCGGATGAAGAAGGGGGCAGTCGGTTTTAAGCCTGAAAACCTTGTTGAACCAGATATCCCTGGTACTTGGAGAGCAATGGAAACTCTCTATGATTCGTGCAAGGCTCGAGCTATTGGTGTGAGCAATTTCGCTACAAAGAAGCTGTCAGATTTGCTGGATGTGGCACGTGTTCCTCCTGCTGTTGACCAAGTGGAGTGCCATCCTTCATGGCAGCAGACCAAGCTGCAATCCTTCTGCAAATCCAAGGGGGTTCACCTTTCTGGATATTCACCACTGGGTTCTCCTGGCACAACATGGATCAAAAGTGATGTCCTTAAGAATCCGATTCTTCTCAGCGTTGCAGAGAAGCTAGGCAAAACTCCTGCTCAAGTTGCTCTTCGATGGGGACTGCAAACGGGTCATAGTGTTCTTCCAAAGAGTACTAATGAAGCAAGGATCAAGGAGAATCTCGATGTCTTTGGCTGGTGTATCCCAGAGGACTTGTTTGCCAAGTTTTCTGAAATTGAGCAGTCCAGCCCTGGCTTGGTAGGAGACGCCGTCGCCACCGCCATTAAGATCCACTGGCCAGTGCGGAAGAAGAAGGGTTCAGCTTTTGGTCCTGAAAACCTTATACAACCAGATATCCCTGCCACATGGAGAGCAATGGAAACTCCCTATGATTCGTGCAAGGCTCGAGCTATTGGTGCTAGTAATTTCGCTATAAAGAAGCTGTCAGATTTGTTGGATATGGCACGAGTTCGTGCTGCTGTTAACCAAGTGGAGTGCCATCCTTCATGGCAGCAGGCCAAGCTATGTTCCTTCTGTAAATCCAAGGGTGTTCACCTTTCTGTTCTCCTGGCACAACATGGATCAAGGGGGATGTCCTTACGAATCCGGTTCTTCTCAGCGTTGCCGAGAAGCTGGGCAAAACTGCTGCACAGGTTGCTCTTCGATGGGGAGTCTGTCGGCATCAACATCAATGATATCATCATACTCCTAATTCAGGATATCATTCTATTCAAGCTCTTTCTTGAACCAATTTGTTGTGTTTGCTGCTTGCAACCTGCTTCTGAAAATGTTCAAGCTCCGTGTCAAGTTCTGGTGTTTAATTATCTGTTACTTGGCTCCATCACTGTGGATGAGGTGGCGGTTAATATCGCTGCTGTGGAGATGGGTGTTGCTACCAAGAGTTGCCTTCCTGCTTCTCAACTTCCACGGCTTTTGCTCATCTCTCCTTCCCAGTTCCCACCACAGTATTATTTCTTTCCGTATGACCACAGTGAAGATCAAACTTGCTTTGTGAGTGATGCTAATCGGAAACTTGTTTAA

Protein Analysis

481

Amino Acids

52.77

Weight (kDa)

8.71

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 40 - 213 8.7e-23 Aldo/keto reductase family
Aldo_ket_red PF00248 229 - 320 7.6e-10 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 73
Acc36I ACCTGC 1 cut(s) 1186
AciI CCGC 5 cut(s) 5, 136, 681, 706, 1262
AclWI GGATC 5 cut(s) 115, 440, 578, 685, 991
AcoI YGGCCR 2 cut(s) 128, 698
AcvI CACGTG 1 cut(s) 302
AcyI GRCGYC 1 cut(s) 669
AfaI GTAC 2 cut(s) 199, 556
AfiI CCNNNNNNNGG 4 cut(s) 56, 88, 658, 1117
AflII CTTAAG 1 cut(s) 449
AflIII ACRYGT 1 cut(s) 301
AgsI TTSAA 4 cut(s) 182, 1135, 1148, 1196
AjnI CCWGG 5 cut(s) 68, 193, 418, 652, 969
AloI GAACNNNNNNTCC 2 cut(s) 174, 206
Alw26I GTCTC 1 cut(s) 660
AlwI GGATC 5 cut(s) 115, 440, 578, 685, 991
Ama87I CYCGRG 2 cut(s) 240, 807
AoxI GGCC 3 cut(s) 128, 698, 918
ApeKI GCWGC 7 cut(s) 346, 358, 878, 913, 1048, 1167, 1274
ArsI GACNNNNNNTTYG 4 cut(s) 263, 295, 429, 461
Asp700I GAANNNNTTC 1 cut(s) 1191
AspS9I GGNCC 2 cut(s) 66, 731
AsuC2I CCSGG 1 cut(s) 84
AsuHPI GGTGA 4 cut(s) 107, 380, 396, 947
AvaI CYCGRG 2 cut(s) 240, 807
AvaII GGWCC 2 cut(s) 66, 731
BalI TGGCCA 2 cut(s) 130, 700
BauI CACGAG 1 cut(s) 867
BbrPI CACGTG 1 cut(s) 302
BbvI GCAGC 7 cut(s) 345, 358, 865, 925, 1035, 1154, 1261
BccI CCATC 7 cut(s) 122, 342, 510, 909, 1061, 1250, 1279
BceAI ACGGC 3 cut(s) 86, 656, 1346
BciT130I CCWGG 5 cut(s) 70, 195, 420, 654, 971
BciVI GTATCC 1 cut(s) 614
BcnI CCSGG 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 660
BfaI CTAG 2 cut(s) 485, 822
BfrI CTTAAG 1 cut(s) 449
BfuAI ACCTGC 1 cut(s) 1186
BfuI GTATCC 1 cut(s) 614
BisI GCNGC 7 cut(s) 347, 359, 879, 914, 1049, 1168, 1275
BlsI GCNGC 7 cut(s) 348, 360, 880, 915, 1050, 1169, 1276
BmcAI AGTACT 1 cut(s) 556
Bme1390I CCNGG 6 cut(s) 70, 84, 195, 420, 654, 971
Bme18I GGWCC 2 cut(s) 66, 731
BmeT110I CYCGRG 2 cut(s) 240, 807
BmgT120I GGNCC 2 cut(s) 66, 731
BmiI GGNNCC 3 cut(s) 40, 67, 1240
BmrFI CCNGG 6 cut(s) 70, 84, 195, 420, 654, 971
BmrI ACTGGG 2 cut(s) 419, 1348
BmsI GCATC 3 cut(s) 36, 1092, 1411
BmuI ACTGGG 2 cut(s) 419, 1348
Bpu10I CCTNAGC 1 cut(s) 61
BpuEI CTTGAG 1 cut(s) 486
BpuMI CCSGG 1 cut(s) 84
BsaAI YACGTR 1 cut(s) 302
BsaBI GATNNNNATC 1 cut(s) 1425
BsaHI GRCGYC 1 cut(s) 669
BsaJI CCNNGG 6 cut(s) 82, 193, 378, 652, 945, 1328
BsaWI WCCGGW 2 cut(s) 35, 1008
BsaXI ACNNNNNCTCC 2 cut(s) 657, 687
Bsc4I CCNNNNNNNGG 4 cut(s) 56, 88, 658, 1117
Bse1I ACTGG 6 cut(s) 131, 131, 414, 701, 701, 1354
Bse3DI GCAATG 2 cut(s) 216, 783
Bse8I GATNNNNATC 1 cut(s) 1425
BseBI CCWGG 5 cut(s) 70, 195, 420, 654, 971
BseDI CCNNGG 6 cut(s) 82, 193, 378, 652, 945, 1328
BseGI GGATG 6 cut(s) 144, 298, 334, 901, 999, 1258
BseJI GATNNNNATC 1 cut(s) 1425
BseLI CCNNNNNNNGG 4 cut(s) 56, 88, 658, 1117
BseMI GCAATG 2 cut(s) 216, 783
BseMII CTCAG 2 cut(s) 481, 1032
BseNI ACTGG 6 cut(s) 131, 131, 414, 701, 701, 1354
BseXI GCAGC 7 cut(s) 345, 358, 865, 925, 1035, 1154, 1261
BseYI CCCAGC 1 cut(s) 1035
BsgI GTGCAG 1 cut(s) 1034
BshFI GGCC 3 cut(s) 130, 700, 920
BsiHKCI CYCGRG 2 cut(s) 240, 807
BsiSI CCGG 3 cut(s) 36, 84, 1009
BslFI GGGAC 2 cut(s) 79, 534
BslI CCNNNNNNNGG 4 cut(s) 56, 88, 658, 1117
BsmAI GTCTC 1 cut(s) 660
BsmBI CGTCTC 1 cut(s) 660
BsmFI GGGAC 2 cut(s) 79, 534
BsnI GGCC 3 cut(s) 130, 700, 920
BsoBI CYCGRG 2 cut(s) 240, 807
Bsp143I GATC 6 cut(s) 120, 432, 570, 690, 983, 1399
BspACI CCGC 5 cut(s) 5, 136, 681, 706, 1262
BspANI GGCC 3 cut(s) 130, 700, 920
BspCNI CTCAG 2 cut(s) 480, 1031
BspLI GGNNCC 3 cut(s) 40, 67, 1240
BspMI ACCTGC 1 cut(s) 1186
BspPI GGATC 5 cut(s) 115, 440, 578, 685, 991
BspQI GCTCTTC 2 cut(s) 516, 1067
BspTI CTTAAG 1 cut(s) 449
BsrDI GCAATG 2 cut(s) 216, 783
BsrI ACTGG 6 cut(s) 131, 131, 414, 701, 701, 1354
BssECI CCNNGG 6 cut(s) 82, 193, 378, 652, 945, 1328
BssMI GATC 6 cut(s) 120, 432, 570, 690, 983, 1399
BssNI GRCGYC 1 cut(s) 669
BssSI CACGAG 1 cut(s) 867
BssT1I CCWWGG 2 cut(s) 378, 945
Bst2BI CACGAG 1 cut(s) 867
Bst2UI CCWGG 5 cut(s) 70, 195, 420, 654, 971
Bst4CI ACNGT 3 cut(s) 1249, 1368, 1394
Bst6I CTCTTC 2 cut(s) 516, 1067
BstACI GRCGYC 1 cut(s) 669
BstAFI CTTAAG 1 cut(s) 449
BstAPI GCANNNNNTGC 1 cut(s) 1057
BstBAI YACGTR 1 cut(s) 302
BstC8I GCNNGC 2 cut(s) 918, 1172
BstDEI CTNAG 3 cut(s) 61, 467, 1018
BstDSI CCRYGG 1 cut(s) 1328
BstENI CCTNNNNNAGG 1 cut(s) 1115
BstF5I GGATG 6 cut(s) 144, 298, 334, 901, 999, 1258
BstKTI GATC 6 cut(s) 123, 435, 573, 693, 986, 1402
BstMAI GTCTC 1 cut(s) 660
BstMBI GATC 6 cut(s) 120, 432, 570, 690, 983, 1399
BstMWI GCNNNNNNNGC 5 cut(s) 355, 506, 818, 922, 1057
BstNI CCWGG 5 cut(s) 70, 195, 420, 654, 971
BstSCI CCNGG 6 cut(s) 68, 82, 193, 418, 652, 969
BstV1I GCAGC 7 cut(s) 345, 358, 865, 925, 1035, 1154, 1261
BstX2I RGATCY 2 cut(s) 120, 690
BstXI CCANNNNNNTGG 1 cut(s) 1249
BstYI RGATCY 2 cut(s) 120, 690
BsuI GTATCC 1 cut(s) 614
BsuRI GGCC 3 cut(s) 130, 700, 920
BtgI CCRYGG 1 cut(s) 1328
BtsCI GGATG 6 cut(s) 144, 298, 334, 901, 999, 1258
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 8 cut(s) 108, 124, 138, 407, 694, 708, 1245, 1399
BveI ACCTGC 1 cut(s) 1186
Cac8I GCNNGC 2 cut(s) 918, 1172
Cfr13I GGNCC 2 cut(s) 66, 731
CseI GACGC 1 cut(s) 677
Csp6I GTAC 2 cut(s) 198, 555
CspCI CAANNNNNGTGG 2 cut(s) 1317, 1352
CviAII CATG 5 cut(s) 342, 429, 768, 909, 980
CviQI GTAC 2 cut(s) 198, 555
DdeI CTNAG 3 cut(s) 61, 467, 1018
DpnI GATC 6 cut(s) 122, 434, 572, 692, 985, 1401
DpnII GATC 6 cut(s) 120, 432, 570, 690, 983, 1399
DrdI GACNNNNNNGTC 1 cut(s) 73
DseDI GACNNNNNNGTC 1 cut(s) 73
EaeI YGGCCR 2 cut(s) 128, 698
Eam1104I CTCTTC 2 cut(s) 516, 1067
EarI CTCTTC 2 cut(s) 516, 1067
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 378, 945
Eco32I GATATC 4 cut(s) 190, 757, 1099, 1123
Eco47I GGWCC 2 cut(s) 66, 731
Eco72I CACGTG 1 cut(s) 302
Eco88I CYCGRG 2 cut(s) 240, 807
EcoNI CCTNNNNNAGG 1 cut(s) 1115
EcoO109I RGGNCCY 1 cut(s) 66
EcoRII CCWGG 5 cut(s) 68, 193, 418, 652, 969
EcoRV GATATC 4 cut(s) 190, 757, 1099, 1123
EcoT14I CCWWGG 2 cut(s) 378, 945
ErhI CCWWGG 2 cut(s) 378, 945
Esp3I CGTCTC 1 cut(s) 660
FaeI CATG 5 cut(s) 345, 432, 771, 912, 983
FalI AAGNNNNNCTT 2 cut(s) 495, 527
FaqI GGGAC 2 cut(s) 79, 534
FatI CATG 5 cut(s) 341, 428, 767, 908, 979
Fnu4HI GCNGC 7 cut(s) 347, 359, 879, 914, 1049, 1168, 1275
FokI GGATG 6 cut(s) 151, 305, 321, 888, 1006, 1265
Fsp4HI GCNGC 7 cut(s) 347, 359, 879, 914, 1049, 1168, 1275
FspBI CTAG 2 cut(s) 485, 822
GluI GCNGC 7 cut(s) 347, 359, 879, 914, 1049, 1168, 1275
GsaI CCCAGC 1 cut(s) 1039
HaeIII GGCC 3 cut(s) 130, 700, 920
HapII CCGG 3 cut(s) 36, 84, 1009
HgaI GACGC 1 cut(s) 677
Hin1I GRCGYC 1 cut(s) 669
Hin1II CATG 5 cut(s) 345, 432, 771, 912, 983
HincII GTYRAC 2 cut(s) 319, 886
HindII GTYRAC 2 cut(s) 319, 886
HinfI GANTC 7 cut(s) 227, 454, 460, 580, 794, 1005, 1073
HpaI GTTAAC 1 cut(s) 886
HpaII CCGG 3 cut(s) 36, 84, 1009
HphI GGTGA 4 cut(s) 107, 380, 396, 947
Hpy166II GTNNAC 4 cut(s) 319, 388, 886, 955
Hpy188I TCNGA 6 cut(s) 283, 459, 634, 850, 1186, 1431
Hpy188III TCNNGA 6 cut(s) 118, 396, 584, 734, 1118, 1145
Hpy8I GTNNAC 4 cut(s) 319, 388, 886, 955
Hpy99I CGWCG 2 cut(s) 107, 677
HpyAV CCTTC 9 cut(s) 60, 139, 348, 376, 709, 915, 943, 1319, 1359
HpyCH4III ACNGT 3 cut(s) 1249, 1368, 1394
HpyCH4IV ACGT 1 cut(s) 301
HpyCH4V TGCA 8 cut(s) 234, 361, 372, 476, 526, 801, 1051, 1174
HpyF10VI GCNNNNNNNGC 5 cut(s) 355, 506, 818, 922, 1057
HpyF3I CTNAG 3 cut(s) 61, 467, 1018
HpySE526I ACGT 1 cut(s) 301
Hsp92I GRCGYC 1 cut(s) 669
Hsp92II CATG 5 cut(s) 345, 432, 771, 912, 983
KspAI GTTAAC 1 cut(s) 886
Kzo9I GATC 6 cut(s) 120, 432, 570, 690, 983, 1399
LguI GCTCTTC 2 cut(s) 516, 1067
LmnI GCTCC 3 cut(s) 38, 1204, 1244
Lsp1109I GCAGC 7 cut(s) 345, 358, 865, 925, 1035, 1154, 1261
LweI GCATC 3 cut(s) 36, 1092, 1411
MaeI CTAG 2 cut(s) 485, 822
MaeII ACGT 1 cut(s) 301
MaeIII GTNAC 1 cut(s) 1230
MalI GATC 6 cut(s) 122, 434, 572, 692, 985, 1401
MboI GATC 6 cut(s) 120, 432, 570, 690, 983, 1399
MboII GAAGA 9 cut(s) 154, 455, 503, 536, 721, 724, 1006, 1054, 1409
MflI RGATCY 2 cut(s) 120, 690
MlsI TGGCCA 2 cut(s) 130, 700
MluCI AATT 6 cut(s) 259, 636, 826, 1113, 1152, 1222
MluNI TGGCCA 2 cut(s) 130, 700
MlyI GAGTC 1 cut(s) 1082
MmeI TCCRAC 1 cut(s) 837
MnlI CCTC 3 cut(s) 318, 604, 1249
Mox20I TGGCCA 2 cut(s) 130, 700
MroXI GAANNNNTTC 1 cut(s) 1191
MscI TGGCCA 2 cut(s) 130, 700
MseI TTAA 8 cut(s) 29, 162, 450, 687, 885, 1221, 1266, 1441
MslI CAYNNNNRTG 1 cut(s) 1247
Msp20I TGGCCA 2 cut(s) 130, 700
MspCI CTTAAG 1 cut(s) 449
MspI CCGG 3 cut(s) 36, 84, 1009
MspR9I CCNGG 6 cut(s) 70, 84, 195, 420, 654, 971
MvaI CCWGG 5 cut(s) 70, 195, 420, 654, 971
MwoI GCNNNNNNNGC 5 cut(s) 355, 506, 818, 922, 1057
NciI CCSGG 1 cut(s) 84
NdeII GATC 6 cut(s) 120, 432, 570, 690, 983, 1399
NlaIII CATG 5 cut(s) 345, 432, 771, 912, 983
NlaIV GGNNCC 3 cut(s) 40, 67, 1240
NmeAIII GCCGAG 1 cut(s) 1053
PaeR7I CTCGAG 2 cut(s) 240, 807
PciSI GCTCTTC 2 cut(s) 516, 1067
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PdmI GAANNNNTTC 1 cut(s) 1191
PfeI GAWTC 6 cut(s) 227, 454, 460, 580, 794, 1005
PflFI GACNNNGTC 1 cut(s) 671
PkrI GCNGC 7 cut(s) 348, 360, 880, 915, 1050, 1169, 1276
PleI GAGTC 1 cut(s) 1081
PmaCI CACGTG 1 cut(s) 302
PmlI CACGTG 1 cut(s) 302
PpsI GAGTC 1 cut(s) 1081
Ppu21I YACGTR 1 cut(s) 302
PpuMI RGGWCCY 1 cut(s) 66
Psp5II RGGWCCY 1 cut(s) 66
Psp6I CCWGG 5 cut(s) 68, 193, 418, 652, 969
PspCI CACGTG 1 cut(s) 302
PspFI CCCAGC 1 cut(s) 1035
PspGI CCWGG 5 cut(s) 68, 193, 418, 652, 969
PspN4I GGNNCC 3 cut(s) 40, 67, 1240
PspPI GGNCC 2 cut(s) 66, 731
PspPPI RGGWCCY 1 cut(s) 66
PspXI VCTCGAGB 2 cut(s) 240, 807
PsuI RGATCY 2 cut(s) 120, 690
PsyI GACNNNGTC 1 cut(s) 671
RsaI GTAC 2 cut(s) 199, 556
RsaNI GTAC 2 cut(s) 198, 555
RseI CAYNNNNRTG 1 cut(s) 1247
SapI GCTCTTC 2 cut(s) 516, 1067
SaqAI TTAA 8 cut(s) 29, 162, 450, 687, 885, 1221, 1266, 1441
SatI GCNGC 7 cut(s) 347, 359, 879, 914, 1049, 1168, 1275
Sau3AI GATC 6 cut(s) 120, 432, 570, 690, 983, 1399
Sau96I GGNCC 2 cut(s) 66, 731
ScaI AGTACT 1 cut(s) 556
SchI GAGTC 1 cut(s) 1082
ScrFI CCNGG 6 cut(s) 70, 84, 195, 420, 654, 971
SfaNI GCATC 3 cut(s) 36, 1092, 1411
Sfr274I CTCGAG 2 cut(s) 240, 807
SinI GGWCC 2 cut(s) 66, 731
SlaI CTCGAG 2 cut(s) 240, 807
SmiMI CAYNNNNRTG 1 cut(s) 1247
SmlI CTYRAG 4 cut(s) 240, 449, 501, 807
SmoI CTYRAG 4 cut(s) 240, 449, 501, 807
Sse9I AATT 6 cut(s) 259, 636, 826, 1113, 1152, 1222
SsiI CCGC 5 cut(s) 5, 136, 681, 706, 1262
SspMI CTAG 2 cut(s) 485, 822
StyD4I CCNGG 6 cut(s) 68, 82, 193, 418, 652, 969
StyI CCWWGG 2 cut(s) 378, 945
TaaI ACNGT 3 cut(s) 1249, 1368, 1394
TaiI ACGT 1 cut(s) 304
TaqI TCGA 5 cut(s) 241, 514, 585, 808, 1065
TasI AATT 6 cut(s) 259, 636, 826, 1113, 1152, 1222
TatI WGTACW 1 cut(s) 554
TfiI GAWTC 6 cut(s) 227, 454, 460, 580, 794, 1005
Tru1I TTAA 8 cut(s) 29, 162, 450, 687, 885, 1221, 1266, 1441
Tru9I TTAA 8 cut(s) 29, 162, 450, 687, 885, 1221, 1266, 1441
TscAI CASTG 8 cut(s) 115, 131, 138, 414, 701, 708, 1252, 1399
TseI GCWGC 7 cut(s) 346, 358, 878, 913, 1048, 1167, 1274
TspDTI ATGAA 4 cut(s) 155, 330, 576, 897
TspGWI ACGGA 2 cut(s) 1191, 1371
TspRI CASTG 8 cut(s) 115, 131, 138, 414, 701, 708, 1252, 1399
Tth111I GACNNNGTC 1 cut(s) 671
Vha464I CTTAAG 1 cut(s) 449
VpaK11BI GGWCC 2 cut(s) 66, 731
XagI CCTNNNNNAGG 1 cut(s) 1115
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 655
XhoI CTCGAG 2 cut(s) 240, 807
XmnI GAANNNNTTC 1 cut(s) 1191
XspI CTAG 2 cut(s) 485, 822
ZrmI AGTACT 1 cut(s) 556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.