MD12G1150200.v1.1

Aldo-keto reductase family 4 member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
23049252 .. 23051659
2408 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1150200.v1.1.491

Sequence Viewer

Length: 948 bp
ATGGCGGACGACATTCTCTTCTTCGAGCTGAACACCGGCGCTAAGATCCCGTCGATAGGGTTGGGGACCTGGCAGGCAAGCCCTGGCCTTGTCGGCGAATCGGTCCACGCCGCCATCAAGGCAGGGTATCGGCATATTGATTGTGCTCAAATCTACGGCAATGAGAAGGAGATTGGTTTGGTGCTGAAGAAACTGTTTGAAGATGGTGTGGTGAAGCGCGAGGATTTGTGGATTACCTCCAAACTCTGGAATACTGATCATGCTCCAGAAGATGTACCAGAGGCATTGGACAGGACTCTGAGAGACTTGCAACTGGATTATGTTGACTTGTACCTTATGCACTGGCCAGTCCGGATGAAGAAGGGATCAGTAGGTTTTAAGCCTGAAAATATTATTGACCCTGATGTCCCTGCAACTTGGAGAGCAATGGAAACACTCTATGATTCGGGAAAGGCTCGAGCTATTGGTGTGAGCAATTTCTCCACAAAAAAGCTGTCAGATTTGCTGGATGTCGCACGTGTTCCTCCTGCTGTTGACCAAGTGGAGTGCCATCCCTCGTGGCAGCAGGACAAGCTACGTTCTTTCTGTAAATCCAAGGGAGTTCACCTTTCTGGATATTCCCCACTGGGCTCTCCTGGAACAACATGGATCAAAAGTGAAGTCCTTAAGAATCCGATTCTTGTGACAGTCGCTGAGAAATTAGGCAAAACTCCTGCACAAGTTGCTCTCCGTTGGGGACTGCAAAAGGGTCATAGTGTTCTTCCCAAGAGTACCAATGAAGCGAGGATCAAGGAGAACCTTGATGTGTTTGGCTGGTCTATCCCAGATGACTTGTTCGCCAAGTTTTCTGAAATTGAGCAGGCAAGACTGATCAGAGGGGCCACATTTGTTCATGACACTTTTGGTCCCTACAGGAGTTTAGAGGAATTCTGGGACGGTGAAATCTAG

Protein Analysis

316

Amino Acids

35.24

Weight (kDa)

5.94

Isoelectric Point (pI)

39.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 19 - 285 3e-54 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 404
AccB7I CCANNNNNTGG 1 cut(s) 246
AccII CGCG 1 cut(s) 219
AccIII TCCGGA 1 cut(s) 351
AciI CCGC 2 cut(s) 5, 111
AclWI GGATC 4 cut(s) 40, 373, 656, 794
AcoI YGGCCR 1 cut(s) 344
AcsI RAATTY 1 cut(s) 926
AcuI CTGAAG 1 cut(s) 206
AcvI CACGTG 1 cut(s) 518
AfaI GTAC 3 cut(s) 276, 332, 772
AfiI CCNNNNNNNGG 2 cut(s) 56, 246
AflII CTTAAG 1 cut(s) 665
AflIII ACRYGT 1 cut(s) 517
AgsI TTSAA 1 cut(s) 200
AjnI CCWGG 3 cut(s) 68, 82, 634
AluBI AGCT 4 cut(s) 28, 461, 493, 574
AluI AGCT 4 cut(s) 28, 461, 493, 574
Alw21I GWGCWC 1 cut(s) 148
Alw26I GTCTC 1 cut(s) 297
AlwI GGATC 4 cut(s) 40, 373, 656, 794
AlwNI CAGNNNCTG 1 cut(s) 692
Ama87I CYCGRG 1 cut(s) 456
Aor13HI TCCGGA 1 cut(s) 351
AoxI GGCC 3 cut(s) 85, 344, 879
ApeKI GCWGC 1 cut(s) 562
ApoI RAATTY 1 cut(s) 926
ArsI GACNNNNNNTTYG 4 cut(s) 479, 511, 645, 677
AspLEI GCGC 2 cut(s) 41, 219
AspS9I GGNCC 4 cut(s) 66, 103, 879, 905
AsuHPI GGTGA 2 cut(s) 223, 596
AvaI CYCGRG 1 cut(s) 456
AvaII GGWCC 3 cut(s) 66, 103, 905
BalI TGGCCA 1 cut(s) 346
BanII GRGCYC 1 cut(s) 632
BauI CACGAG 1 cut(s) 556
BbrPI CACGTG 1 cut(s) 518
Bbv12I GWGCWC 1 cut(s) 148
BbvI GCAGC 1 cut(s) 574
BccI CCATC 3 cut(s) 122, 197, 558
BceAI ACGGC 1 cut(s) 172
BciT130I CCWGG 3 cut(s) 70, 84, 636
BclI TGATCA 2 cut(s) 256, 870
BcoDI GTCTC 1 cut(s) 297
BfaI CTAG 1 cut(s) 946
BfmI CTRYAG 1 cut(s) 910
BfoI RGCGCY 1 cut(s) 42
BfrI CTTAAG 1 cut(s) 665
BglI GCCNNNNNGGC 2 cut(s) 93, 119
BisI GCNGC 2 cut(s) 111, 563
BlsI GCNGC 2 cut(s) 112, 564
Bme1390I CCNGG 3 cut(s) 70, 84, 636
Bme18I GGWCC 3 cut(s) 66, 103, 905
BmeT110I CYCGRG 1 cut(s) 456
BmgT120I GGNCC 4 cut(s) 66, 103, 879, 905
BmiI GGNNCC 3 cut(s) 67, 880, 907
BmrFI CCNGG 3 cut(s) 70, 84, 636
BmrI ACTGGG 1 cut(s) 635
BmuI ACTGGG 1 cut(s) 635
BpmI CTGGAG 1 cut(s) 249
BsaAI YACGTR 1 cut(s) 518
BsaJI CCNNGG 2 cut(s) 82, 594
BsaWI WCCGGW 1 cut(s) 351
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 246
Bse118I RCCGGY 1 cut(s) 35
Bse1I ACTGG 4 cut(s) 318, 347, 347, 630
Bse3DI GCAATG 2 cut(s) 166, 432
BseAI TCCGGA 1 cut(s) 351
BseBI CCWGG 3 cut(s) 70, 84, 636
BseDI CCNNGG 2 cut(s) 82, 594
BseGI GGATG 3 cut(s) 360, 514, 550
BseLI CCNNNNNNNGG 2 cut(s) 56, 246
BseMI GCAATG 2 cut(s) 166, 432
BseMII CTCAG 2 cut(s) 290, 684
BseNI ACTGG 4 cut(s) 318, 347, 347, 630
BseXI GCAGC 1 cut(s) 574
BsgI GTGCAG 1 cut(s) 699
Bsh1236I CGCG 1 cut(s) 219
BshFI GGCC 3 cut(s) 87, 346, 881
BsiHKAI GWGCWC 1 cut(s) 148
BsiHKCI CYCGRG 1 cut(s) 456
BsiSI CCGG 2 cut(s) 36, 352
BslFI GGGAC 4 cut(s) 79, 392, 750, 891
BslI CCNNNNNNNGG 2 cut(s) 56, 246
BsmAI GTCTC 1 cut(s) 297
BsmFI GGGAC 4 cut(s) 79, 392, 750, 891
BsnI GGCC 3 cut(s) 87, 346, 881
BsoBI CYCGRG 1 cut(s) 456
Bsp1286I GDGCHC 2 cut(s) 148, 632
Bsp13I TCCGGA 1 cut(s) 351
Bsp143I GATC 6 cut(s) 45, 256, 365, 648, 786, 870
BspACI CCGC 2 cut(s) 5, 111
BspANI GGCC 3 cut(s) 87, 346, 881
BspCNI CTCAG 2 cut(s) 291, 685
BspEI TCCGGA 1 cut(s) 351
BspFNI CGCG 1 cut(s) 219
BspHI TCATGA 1 cut(s) 892
BspLI GGNNCC 3 cut(s) 67, 880, 907
BspPI GGATC 4 cut(s) 40, 373, 656, 794
BspTI CTTAAG 1 cut(s) 665
BsrDI GCAATG 2 cut(s) 166, 432
BsrFI RCCGGY 1 cut(s) 35
BsrI ACTGG 4 cut(s) 318, 347, 347, 630
BssAI RCCGGY 1 cut(s) 35
BssECI CCNNGG 2 cut(s) 82, 594
BssMI GATC 6 cut(s) 45, 256, 365, 648, 786, 870
BssSI CACGAG 1 cut(s) 556
BssT1I CCWWGG 1 cut(s) 594
Bst2BI CACGAG 1 cut(s) 556
Bst2UI CCWGG 3 cut(s) 70, 84, 636
Bst4CI ACNGT 3 cut(s) 195, 688, 938
Bst6I CTCTTC 1 cut(s) 23
BstAFI CTTAAG 1 cut(s) 665
BstAPI GCANNNNNTGC 1 cut(s) 722
BstBAI YACGTR 1 cut(s) 518
BstC8I GCNNGC 3 cut(s) 75, 79, 861
BstDEI CTNAG 3 cut(s) 42, 299, 693
BstF5I GGATG 3 cut(s) 360, 514, 550
BstFNI CGCG 1 cut(s) 219
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 2 cut(s) 41, 219
BstKTI GATC 6 cut(s) 48, 259, 368, 651, 789, 873
BstMAI GTCTC 1 cut(s) 297
BstMBI GATC 6 cut(s) 45, 256, 365, 648, 786, 870
BstMWI GCNNNNNNNGC 4 cut(s) 93, 119, 571, 722
BstNI CCWGG 3 cut(s) 70, 84, 636
BstSCI CCNGG 3 cut(s) 68, 82, 634
BstSFI CTRYAG 1 cut(s) 910
BstUI CGCG 1 cut(s) 219
BstV1I GCAGC 1 cut(s) 574
BstX2I RGATCY 1 cut(s) 45
BstYI RGATCY 1 cut(s) 45
BsuRI GGCC 3 cut(s) 87, 346, 881
BtsCI GGATG 3 cut(s) 360, 514, 550
BtsIMutI CAGTG 2 cut(s) 340, 623
Cac8I GCNNGC 3 cut(s) 75, 79, 861
CaiI CAGNNNCTG 1 cut(s) 692
CciI TCATGA 1 cut(s) 892
CfoI GCGC 2 cut(s) 41, 219
Cfr10I RCCGGY 1 cut(s) 35
Cfr13I GGNCC 4 cut(s) 66, 103, 879, 905
Csp6I GTAC 3 cut(s) 275, 331, 771
CviAII CATG 3 cut(s) 260, 645, 893
CviQI GTAC 3 cut(s) 275, 331, 771
DdeI CTNAG 3 cut(s) 42, 299, 693
DpnI GATC 6 cut(s) 47, 258, 367, 650, 788, 872
DpnII GATC 6 cut(s) 45, 256, 365, 648, 786, 870
DrdI GACNNNNNNGTC 1 cut(s) 404
DseDI GACNNNNNNGTC 1 cut(s) 404
EaeI YGGCCR 1 cut(s) 344
Eam1104I CTCTTC 1 cut(s) 23
EarI CTCTTC 1 cut(s) 23
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 594
Eco24I GRGCYC 1 cut(s) 632
Eco47I GGWCC 3 cut(s) 66, 103, 905
Eco57I CTGAAG 1 cut(s) 206
Eco72I CACGTG 1 cut(s) 518
Eco88I CYCGRG 1 cut(s) 456
EcoO109I RGGNCCY 1 cut(s) 66
EcoRI GAATTC 1 cut(s) 926
EcoRII CCWGG 3 cut(s) 68, 82, 634
EcoT14I CCWWGG 1 cut(s) 594
EcoT38I GRGCYC 1 cut(s) 632
ErhI CCWWGG 1 cut(s) 594
FaeI CATG 3 cut(s) 263, 648, 896
FaiI YATR 8 cut(s) 135, 261, 321, 338, 441, 646, 753, 894
FaqI GGGAC 4 cut(s) 79, 392, 750, 891
FatI CATG 3 cut(s) 259, 644, 892
FbaI TGATCA 2 cut(s) 256, 870
Fnu4HI GCNGC 2 cut(s) 111, 563
FokI GGATG 3 cut(s) 367, 521, 537
FriOI GRGCYC 1 cut(s) 632
Fsp4HI GCNGC 2 cut(s) 111, 563
FspBI CTAG 1 cut(s) 946
GlaI GCGC 2 cut(s) 40, 218
GluI GCNGC 2 cut(s) 111, 563
GsuI CTGGAG 1 cut(s) 249
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 3 cut(s) 87, 346, 881
HapII CCGG 2 cut(s) 36, 352
HhaI GCGC 2 cut(s) 41, 219
Hin1II CATG 3 cut(s) 263, 648, 896
Hin6I GCGC 2 cut(s) 39, 217
HinP1I GCGC 2 cut(s) 39, 217
HincII GTYRAC 2 cut(s) 325, 535
HindII GTYRAC 2 cut(s) 325, 535
HinfI GANTC 5 cut(s) 98, 295, 443, 670, 676
HpaII CCGG 2 cut(s) 36, 352
HphI GGTGA 2 cut(s) 223, 596
Hpy166II GTNNAC 4 cut(s) 106, 325, 535, 604
Hpy188I TCNGA 5 cut(s) 300, 499, 675, 850, 875
Hpy188III TCNNGA 6 cut(s) 247, 266, 352, 447, 612, 893
Hpy8I GTNNAC 4 cut(s) 106, 325, 535, 604
Hpy99I CGWCG 1 cut(s) 55
HpyAV CCTTC 2 cut(s) 160, 355
HpyCH4III ACNGT 3 cut(s) 195, 688, 938
HpyCH4IV ACGT 2 cut(s) 517, 577
HpyCH4V TGCA 5 cut(s) 310, 340, 413, 716, 742
HpyF10VI GCNNNNNNNGC 4 cut(s) 93, 119, 571, 722
HpyF3I CTNAG 3 cut(s) 42, 299, 693
HpySE526I ACGT 2 cut(s) 517, 577
Hsp92II CATG 3 cut(s) 263, 648, 896
HspAI GCGC 2 cut(s) 39, 217
Kpn2I TCCGGA 1 cut(s) 351
Ksp22I TGATCA 2 cut(s) 256, 870
Kzo9I GATC 6 cut(s) 45, 256, 365, 648, 786, 870
LmnI GCTCC 1 cut(s) 268
Lsp1109I GCAGC 1 cut(s) 574
MaeI CTAG 1 cut(s) 946
MaeII ACGT 2 cut(s) 517, 577
MaeIII GTNAC 1 cut(s) 682
MalI GATC 6 cut(s) 47, 258, 367, 650, 788, 872
MboI GATC 6 cut(s) 45, 256, 365, 648, 786, 870
MboII GAAGA 7 cut(s) 10, 13, 199, 212, 281, 370, 752
MflI RGATCY 1 cut(s) 45
MhlI GDGCHC 2 cut(s) 148, 632
MlsI TGGCCA 1 cut(s) 346
MluCI AATT 4 cut(s) 475, 698, 852, 926
MluNI TGGCCA 1 cut(s) 346
MlyI GAGTC 1 cut(s) 289
MnlI CCTC 8 cut(s) 214, 247, 274, 534, 565, 777, 869, 916
Mox20I TGGCCA 1 cut(s) 346
MroI TCCGGA 1 cut(s) 351
MscI TGGCCA 1 cut(s) 346
MseI TTAA 2 cut(s) 378, 666
Msp20I TGGCCA 1 cut(s) 346
MspCI CTTAAG 1 cut(s) 665
MspI CCGG 2 cut(s) 36, 352
MspR9I CCNGG 3 cut(s) 70, 84, 636
MvaI CCWGG 3 cut(s) 70, 84, 636
MvnI CGCG 1 cut(s) 219
MwoI GCNNNNNNNGC 4 cut(s) 93, 119, 571, 722
NdeII GATC 6 cut(s) 45, 256, 365, 648, 786, 870
NlaIII CATG 3 cut(s) 263, 648, 896
NlaIV GGNNCC 3 cut(s) 67, 880, 907
NmuCI GTSAC 1 cut(s) 682
PaeR7I CTCGAG 1 cut(s) 456
PagI TCATGA 1 cut(s) 892
PfeI GAWTC 4 cut(s) 98, 443, 670, 676
PflMI CCANNNNNTGG 1 cut(s) 246
PfoI TCCNGGA 1 cut(s) 634
PkrI GCNGC 2 cut(s) 112, 564
PleI GAGTC 1 cut(s) 289
PmaCI CACGTG 1 cut(s) 518
PmlI CACGTG 1 cut(s) 518
PpsI GAGTC 1 cut(s) 289
Ppu21I YACGTR 1 cut(s) 518
PpuMI RGGWCCY 1 cut(s) 66
Psp5II RGGWCCY 1 cut(s) 66
Psp6I CCWGG 3 cut(s) 68, 82, 634
PspCI CACGTG 1 cut(s) 518
PspGI CCWGG 3 cut(s) 68, 82, 634
PspN4I GGNNCC 3 cut(s) 67, 880, 907
PspPI GGNCC 4 cut(s) 66, 103, 879, 905
PspPPI RGGWCCY 1 cut(s) 66
PspXI VCTCGAGB 1 cut(s) 456
PstNI CAGNNNCTG 1 cut(s) 692
PsuI RGATCY 1 cut(s) 45
RsaI GTAC 3 cut(s) 276, 332, 772
RsaNI GTAC 3 cut(s) 275, 331, 771
SaqAI TTAA 2 cut(s) 378, 666
SatI GCNGC 2 cut(s) 111, 563
Sau3AI GATC 6 cut(s) 45, 256, 365, 648, 786, 870
Sau96I GGNCC 4 cut(s) 66, 103, 879, 905
SchI GAGTC 1 cut(s) 289
ScrFI CCNGG 3 cut(s) 70, 84, 636
SduI GDGCHC 2 cut(s) 148, 632
SfcI CTRYAG 1 cut(s) 910
Sfr274I CTCGAG 1 cut(s) 456
SgrAI CRCCGGYG 1 cut(s) 35
SinI GGWCC 3 cut(s) 66, 103, 905
SlaI CTCGAG 1 cut(s) 456
SmlI CTYRAG 2 cut(s) 456, 665
SmoI CTYRAG 2 cut(s) 456, 665
Sse9I AATT 4 cut(s) 475, 698, 852, 926
SsiI CCGC 2 cut(s) 5, 111
SspI AATATT 1 cut(s) 391
SspMI CTAG 1 cut(s) 946
StyD4I CCNGG 3 cut(s) 68, 82, 634
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 3 cut(s) 195, 688, 938
TaiI ACGT 2 cut(s) 520, 580
TaqI TCGA 3 cut(s) 24, 53, 457
TaqII GACCGA 1 cut(s) 91
TasI AATT 4 cut(s) 475, 698, 852, 926
TauI GCSGC 1 cut(s) 113
TfiI GAWTC 4 cut(s) 98, 443, 670, 676
Tru1I TTAA 2 cut(s) 378, 666
Tru9I TTAA 2 cut(s) 378, 666
TscAI CASTG 2 cut(s) 347, 630
TseFI GTSAC 1 cut(s) 682
TseI GCWGC 1 cut(s) 562
Tsp45I GTSAC 1 cut(s) 682
TspDTI ATGAA 3 cut(s) 371, 792, 881
TspGWI ACGGA 1 cut(s) 719
TspRI CASTG 2 cut(s) 347, 630
Van91I CCANNNNNTGG 1 cut(s) 246
Vha464I CTTAAG 1 cut(s) 665
VpaK11BI GGWCC 3 cut(s) 66, 103, 905
XapI RAATTY 1 cut(s) 926
XhoI CTCGAG 1 cut(s) 456
XspI CTAG 1 cut(s) 946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.