AT2G38650

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
16161455 .. 16165876
4422 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G38650.2

Sequence Viewer

Length: 1860 bp
ATGAAAGGCGGAGGCGGTGGTGGAGGAGGTGGTGGCGGAGGAAAACGCCGGTGGAAAGTTCTGGTGATTGGAGTTTTGGTTCTTGTTATTCTTTCTATGCTTGTTCCTCTTGCTTTCTTACTCGGTCTTCACAATGGCTTTCACTCTCCTGGATTTGTCACTGTTCAACCGGCTTCTTCATTTGAGAGCTTTACCAGAATCAATGCTACTAAGCATACACAGAGAGATGTATCCGAACGGGTCGATGAGGTTCTTCAAAAAATCAATCCAGTTCTTCCCAAGAAAAGCGACATAAACGTGGGTTCCAGAGATGTGAATGCAACAAGCGGCACTGATTCTAAAAAAAGAGGATTACCAGTGTCCCCAACTGTTGTTGCCAATCCAAGCCCTGCAAATAAAACAAAATCGGAAGCCTCATATACAGGTGTTCAGAGGAAAATAGTAAGTGGTGATGAAACTTGGAGAACTTGTGAAGTGAAATATGGGAGCTACTGCCTCTGGAGGGAGGAAAATAAGGAACCAATGAAAGATGCCAAGGTGAAGCAAATGAAGGACCAGCTGTTTGTGGCTAGAGCATACTATCCCAGTATTGCTAAAATGCCTTCTCAAAGCAAGTTGACTCGGGATATGAAACAGAATATCCAAGAGTTTGAGCGTATTCTTAGTGAAAGTTCTCAAGATGCTGACCTTCCACCACAGGTTGATAAAAAGTTGCAGAAGATGGAAGCTGTAATTGCAAAGGCAAAGTCTTTTCCAGTCGACTGTAACAATGTTGACAAGAAATTGAGACAGATCCTTGATTTGACTGAGGATGAAGCTAGTTTCCACATGAAACAGAGTGTGTTCCTCTACCAGCTTGCAGTACAGACAATGCCTAAGAGTCTTCATTGCTTGTCAATGCGACTAACTGTGGAACATTTCAAGTCAGATTCACTTGAGGATCCCATTAGTGAGAAATTTTCAGATCCCTCATTACTTCACTTTGTTATCATCTCCGATAATATACTAGCATCGTCCGTTGTGATCAACTCAACGGTTGTACATGCAAGGGACAGTAAAAACTTTGTTTTCCATGTACTGACAGACGAGCAGAATTACTTTGCAATGAAACAATGGTTTATTAGGAATCCTTGCAAACAATCAACTGTTCAAGTATTGAACATTGAAAAACTCGAGCTGGACGATTCTGATATGAAACTGTCTTTGTCTGCGGAGTTCCGTGTTTCCTTCCCCAGTGGTGACCTTTTGGCGTCTCAACAGAATAGAACACACTACTTATCCCTTTTCTCTCAATCTCACTATCTTCTTCCCAAATTATTTGACAAATTGGAGAAGGTTGTGATTCTGGATGATGACGTTGTAGTCCAGCGAGACTTATCTCCCCTTTGGGACCTTGATATGGAAGGGAAAGTGAATGGCGCTGTTAAGTCGTGCACTGTGAGATTGGGTCAGCTAAGGAGTCTCAAGAGAGGAAATTTTGATACCAATGCTTGTCTCTGGATGTCTGGTTTGAATGTCGTTGATCTTGCTAGATGGAGGGCATTGGGTGTTTCAGAAACCTATCAAAAATATTATAAAGAGATGAGTAGTGGAGATGAGTCGAGCGAAGCAATTGCATTGCAGGCAAGCTTGCTCACATTTCAAGACCAAGTATATGCTCTTGACGACAAATGGGCTCTATCAGGGCTTGGTTATGACTACTACATCAATGCACAAGCCATAAAAAACGCAGCCATATTGCACTATAACGGGAACATGAAGCCGTGGCTTGAGCTGGGAATCCCAAATTACAAAAACTATTGGAGAAGGCATCTGAGTCGGGAAGATCGGTTCTTGAGTGACTGTAACGTGAATCCTTGA

Protein Analysis

619

Amino Acids

69.75

Weight (kDa)

8.62

Isoelectric Point (pI)

53.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GAUT_1 PF25557 176 - 251 2.1e-29 Galacturonosyltransferase domain 1
Glyco_transf_8 PF01501 335 - 591 2.8e-46 Glycosyl transferase family 8
Glyco_transf_24 PF18404 368 - 538 2.4e-09 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1575
AasI GACNNNNNNGTC 1 cut(s) 1361
AccI GTMKAC 1 cut(s) 759
AciI CCGC 5 cut(s) 9, 15, 36, 327, 1211
AclWI GGATC 4 cut(s) 787, 935, 948, 959
AcsI RAATTY 2 cut(s) 956, 1474
AcyI GRCGYC 1 cut(s) 1250
AfaI GTAC 3 cut(s) 864, 1041, 1077
AfiI CCNNNNNNNGG 2 cut(s) 502, 1399
AgsI TTSAA 8 cut(s) 167, 257, 922, 1151, 1159, 1166, 1513, 1643
AjnI CCWGG 1 cut(s) 148
AloI GAACNNNNNNTCC 4 cut(s) 63, 95, 1814, 1846
Alw21I GWGCWC 1 cut(s) 1436
Alw26I GTCTC 5 cut(s) 781, 1257, 1365, 1466, 1499
Alw44I GTGCAC 1 cut(s) 1432
AlwI GGATC 4 cut(s) 787, 935, 948, 959
Ama87I CYCGRG 2 cut(s) 621, 1172
ApaLI GTGCAC 1 cut(s) 1432
ApeKI GCWGC 1 cut(s) 1730
ApoI RAATTY 2 cut(s) 956, 1474
ArsI GACNNNNNNTTYG 4 cut(s) 545, 577, 731, 763
AspLEI GCGC 1 cut(s) 1421
AspS9I GGNCC 2 cut(s) 553, 1390
AsuHPI GGTGA 4 cut(s) 76, 461, 550, 1250
AvaI CYCGRG 2 cut(s) 621, 1172
AvaII GGWCC 2 cut(s) 553, 1390
BaeGI GKGCMC 1 cut(s) 1436
BamHI GGATCC 1 cut(s) 940
BanII GRGCYC 1 cut(s) 1678
BbsI GAAGAC 2 cut(s) 119, 875
Bbv12I GWGCWC 1 cut(s) 1436
BbvI GCAGC 1 cut(s) 1742
BccI CCATC 2 cut(s) 715, 1527
BceAI ACGGC 1 cut(s) 1747
BcgI CGANNNNNNTGC 4 cut(s) 1595, 1629, 1799, 1833
BciT130I CCWGG 1 cut(s) 150
BciVI GTATCC 1 cut(s) 241
BclI TGATCA 1 cut(s) 1023
BcoDI GTCTC 5 cut(s) 781, 1257, 1365, 1466, 1499
BfaI CTAG 4 cut(s) 570, 819, 1007, 1530
BfoI RGCGCY 1 cut(s) 1422
BfuI GTATCC 1 cut(s) 241
BisI GCNGC 2 cut(s) 328, 1731
BlsI GCNGC 2 cut(s) 329, 1732
Bme1390I CCNGG 1 cut(s) 150
Bme18I GGWCC 2 cut(s) 553, 1390
BmeT110I CYCGRG 2 cut(s) 621, 1172
BmgT120I GGNCC 2 cut(s) 553, 1390
BmiI GGNNCC 4 cut(s) 304, 519, 942, 1391
BmrFI CCNGG 1 cut(s) 150
BmrI ACTGGG 2 cut(s) 579, 1227
BmsI GCATC 4 cut(s) 520, 670, 1019, 1819
BmuI ACTGGG 2 cut(s) 579, 1227
BpiI GAAGAC 2 cut(s) 119, 875
BpmI CTGGAG 1 cut(s) 520
Bpu10I CCTNAGC 1 cut(s) 1454
BpuEI CTTGAG 5 cut(s) 660, 956, 1448, 1790, 1855
BsaHI GRCGYC 1 cut(s) 1250
BsaJI CCNNGG 2 cut(s) 534, 1763
BsaXI ACNNNNNCTCC 4 cut(s) 63, 93, 454, 484
Bsc4I CCNNNNNNNGG 2 cut(s) 502, 1399
Bse118I RCCGGY 2 cut(s) 48, 169
Bse1I ACTGG 5 cut(s) 269, 356, 585, 755, 1233
Bse3DI GCAATG 3 cut(s) 886, 1110, 1616
BseBI CCWGG 1 cut(s) 150
BseDI CCNNGG 2 cut(s) 534, 1763
BseGI GGATG 3 cut(s) 817, 1354, 1506
BseLI CCNNNNNNNGG 2 cut(s) 502, 1399
BseMI GCAATG 3 cut(s) 886, 1110, 1616
BseMII CTCAG 2 cut(s) 798, 1805
BseNI ACTGG 5 cut(s) 269, 356, 585, 755, 1233
BseRI GAGGAG 1 cut(s) 39
BseSI GKGCMC 1 cut(s) 1436
BseXI GCAGC 1 cut(s) 1742
BseYI CCCAGC 1 cut(s) 1774
BsiHKAI GWGCWC 1 cut(s) 1436
BsiHKCI CYCGRG 2 cut(s) 621, 1172
BsiSI CCGG 2 cut(s) 49, 170
BslFI GGGAC 3 cut(s) 346, 1064, 1403
BslI CCNNNNNNNGG 2 cut(s) 502, 1399
BsmAI GTCTC 5 cut(s) 781, 1257, 1365, 1466, 1499
BsmBI CGTCTC 1 cut(s) 1257
BsmFI GGGAC 3 cut(s) 346, 1064, 1403
BsmI GAATGC 1 cut(s) 322
BsoBI CYCGRG 2 cut(s) 621, 1172
Bsp1286I GDGCHC 2 cut(s) 1436, 1678
Bsp1407I TGTACA 1 cut(s) 1039
Bsp143I GATC 6 cut(s) 792, 940, 964, 1023, 1522, 1825
BspACI CCGC 5 cut(s) 9, 15, 36, 327, 1211
BspCNI CTCAG 2 cut(s) 799, 1806
BspLI GGNNCC 4 cut(s) 304, 519, 942, 1391
BspPI GGATC 4 cut(s) 787, 935, 948, 959
BsrDI GCAATG 3 cut(s) 886, 1110, 1616
BsrFI RCCGGY 2 cut(s) 48, 169
BsrGI TGTACA 1 cut(s) 1039
BsrI ACTGG 5 cut(s) 269, 356, 585, 755, 1233
BssAI RCCGGY 2 cut(s) 48, 169
BssECI CCNNGG 2 cut(s) 534, 1763
BssMI GATC 6 cut(s) 792, 940, 964, 1023, 1522, 1825
BssNI GRCGYC 1 cut(s) 1250
BssT1I CCWWGG 1 cut(s) 534
Bst2UI CCWGG 1 cut(s) 150
BstACI GRCGYC 1 cut(s) 1250
BstAUI TGTACA 1 cut(s) 1039
BstC8I GCNNGC 4 cut(s) 858, 1623, 1627, 1631
BstDEI CTNAG 6 cut(s) 210, 662, 807, 876, 1454, 1814
BstDSI CCRYGG 1 cut(s) 1763
BstEII GGTNACC 1 cut(s) 1238
BstF5I GGATG 3 cut(s) 817, 1354, 1506
BstH2I RGCGCY 1 cut(s) 1422
BstHHI GCGC 1 cut(s) 1421
BstKTI GATC 6 cut(s) 795, 943, 967, 1026, 1525, 1828
BstMAI GTCTC 5 cut(s) 781, 1257, 1365, 1466, 1499
BstMBI GATC 6 cut(s) 792, 940, 964, 1023, 1522, 1825
BstMWI GCNNNNNNNGC 2 cut(s) 734, 1622
BstNI CCWGG 1 cut(s) 150
BstNSI RCATGY 1 cut(s) 1046
BstPI GGTNACC 1 cut(s) 1238
BstSCI CCNGG 1 cut(s) 148
BstSLI GKGCMC 1 cut(s) 1436
BstV1I GCAGC 1 cut(s) 1742
BstV2I GAAGAC 2 cut(s) 119, 875
BstX2I RGATCY 3 cut(s) 792, 940, 964
BstYI RGATCY 3 cut(s) 792, 940, 964
BsuI GTATCC 1 cut(s) 241
BtgI CCRYGG 1 cut(s) 1763
BtsCI GGATG 3 cut(s) 817, 1354, 1506
BtsIMutI CAGTG 5 cut(s) 159, 330, 363, 1240, 1434
Cac8I GCNNGC 4 cut(s) 858, 1623, 1627, 1631
CfoI GCGC 1 cut(s) 1421
Cfr10I RCCGGY 2 cut(s) 48, 169
Cfr13I GGNCC 2 cut(s) 553, 1390
CseI GACGC 1 cut(s) 1239
Csp6I GTAC 3 cut(s) 863, 1040, 1076
CviAII CATG 4 cut(s) 829, 1043, 1073, 1756
CviQI GTAC 3 cut(s) 863, 1040, 1076
DdeI CTNAG 6 cut(s) 210, 662, 807, 876, 1454, 1814
DpnI GATC 6 cut(s) 794, 942, 966, 1025, 1524, 1827
DpnII GATC 6 cut(s) 792, 940, 964, 1023, 1522, 1825
DrdI GACNNNNNNGTC 1 cut(s) 1361
DseDI GACNNNNNNGTC 1 cut(s) 1361
EciI GGCGGA 2 cut(s) 24, 51
Eco130I CCWWGG 1 cut(s) 534
Eco24I GRGCYC 1 cut(s) 1678
Eco47I GGWCC 2 cut(s) 553, 1390
Eco88I CYCGRG 2 cut(s) 621, 1172
Eco91I GGTNACC 1 cut(s) 1238
EcoO109I RGGNCCY 1 cut(s) 1390
EcoO65I GGTNACC 1 cut(s) 1238
EcoRII CCWGG 1 cut(s) 148
EcoT14I CCWWGG 1 cut(s) 534
EcoT38I GRGCYC 1 cut(s) 1678
ErhI CCWWGG 1 cut(s) 534
Esp3I CGTCTC 1 cut(s) 1257
FaeI CATG 4 cut(s) 832, 1046, 1076, 1759
FaqI GGGAC 3 cut(s) 346, 1064, 1403
FatI CATG 4 cut(s) 828, 1042, 1072, 1755
FbaI TGATCA 1 cut(s) 1023
FblI GTMKAC 1 cut(s) 759
Fnu4HI GCNGC 2 cut(s) 328, 1731
FokI GGATG 3 cut(s) 824, 1361, 1513
FriOI GRGCYC 1 cut(s) 1678
Fsp4HI GCNGC 2 cut(s) 328, 1731
FspBI CTAG 4 cut(s) 570, 819, 1007, 1530
GlaI GCGC 1 cut(s) 1420
GluI GCNGC 2 cut(s) 328, 1731
GsaI CCCAGC 1 cut(s) 1778
GsuI CTGGAG 1 cut(s) 520
HaeII RGCGCY 1 cut(s) 1422
HapII CCGG 2 cut(s) 49, 170
HgaI GACGC 1 cut(s) 1239
HhaI GCGC 1 cut(s) 1421
Hin1I GRCGYC 1 cut(s) 1250
Hin1II CATG 4 cut(s) 832, 1046, 1076, 1759
Hin6I GCGC 1 cut(s) 1419
HinP1I GCGC 1 cut(s) 1419
HincII GTYRAC 3 cut(s) 618, 760, 775
HindII GTYRAC 3 cut(s) 618, 760, 775
HindIII AAGCTT 1 cut(s) 1627
HpaII CCGG 2 cut(s) 49, 170
HphI GGTGA 4 cut(s) 76, 461, 550, 1250
Hpy166II GTNNAC 4 cut(s) 618, 760, 775, 1434
Hpy188I TCNGA 9 cut(s) 235, 409, 432, 928, 964, 997, 1189, 1555, 1815
Hpy8I GTNNAC 4 cut(s) 618, 760, 775, 1434
HpyAV CCTTC 7 cut(s) 544, 612, 698, 1237, 1327, 1397, 1800
HpyCH4IV ACGT 3 cut(s) 297, 1356, 1848
HpyF10VI GCNNNNNNNGC 2 cut(s) 734, 1622
HpyF3I CTNAG 6 cut(s) 210, 662, 807, 876, 1454, 1814
HpySE526I ACGT 3 cut(s) 297, 1356, 1848
Hsp92I GRCGYC 1 cut(s) 1250
Hsp92II CATG 4 cut(s) 832, 1046, 1076, 1759
HspAI GCGC 1 cut(s) 1419
Ksp22I TGATCA 1 cut(s) 1023
Kzo9I GATC 6 cut(s) 792, 940, 964, 1023, 1522, 1825
LmnI GCTCC 1 cut(s) 486
Lsp1109I GCAGC 1 cut(s) 1742
LweI GCATC 4 cut(s) 520, 670, 1019, 1819
MaeI CTAG 4 cut(s) 570, 819, 1007, 1530
MaeII ACGT 3 cut(s) 297, 1356, 1848
MaeIII GTNAC 5 cut(s) 157, 764, 1238, 1838, 1844
MalI GATC 6 cut(s) 794, 942, 966, 1025, 1524, 1827
MboI GATC 6 cut(s) 792, 940, 964, 1023, 1522, 1825
MboII GAAGA 9 cut(s) 119, 168, 245, 266, 730, 875, 1295, 1298, 1835
MfeI CAATTG 1 cut(s) 1611
MflI RGATCY 3 cut(s) 792, 940, 964
MhlI GDGCHC 2 cut(s) 1436, 1678
MluCI AATT 9 cut(s) 732, 782, 956, 1093, 1313, 1325, 1474, 1611, 1786
MlyI GAGTC 5 cut(s) 613, 889, 1468, 1607, 1825
MseI TTAA 1 cut(s) 1425
MslI CAYNNNNRTG 1 cut(s) 296
MspA1I CMGCKG 1 cut(s) 559
MspI CCGG 2 cut(s) 49, 170
MspR9I CCNGG 1 cut(s) 150
MunI CAATTG 1 cut(s) 1611
Mva1269I GAATGC 1 cut(s) 322
MvaI CCWGG 1 cut(s) 150
MwoI GCNNNNNNNGC 2 cut(s) 734, 1622
NdeII GATC 6 cut(s) 792, 940, 964, 1023, 1522, 1825
NlaIII CATG 4 cut(s) 832, 1046, 1076, 1759
NlaIV GGNNCC 4 cut(s) 304, 519, 942, 1391
NmuCI GTSAC 3 cut(s) 157, 1238, 1838
NspI RCATGY 1 cut(s) 1046
PaeR7I CTCGAG 1 cut(s) 1172
PcsI WCGNNNNNNNCGW 1 cut(s) 1179
PctI GAATGC 1 cut(s) 322
PfeI GAWTC 8 cut(s) 198, 335, 929, 1126, 1184, 1342, 1779, 1852
PfoI TCCNGGA 1 cut(s) 148
PkrI GCNGC 2 cut(s) 329, 1732
PleI GAGTC 5 cut(s) 613, 888, 1467, 1606, 1824
PpsI GAGTC 5 cut(s) 613, 888, 1467, 1606, 1824
PpuMI RGGWCCY 1 cut(s) 1390
PsiI TTATAA 1 cut(s) 1575
Psp5II RGGWCCY 1 cut(s) 1390
Psp6I CCWGG 1 cut(s) 148
PspEI GGTNACC 1 cut(s) 1238
PspFI CCCAGC 1 cut(s) 1774
PspGI CCWGG 1 cut(s) 148
PspN4I GGNNCC 4 cut(s) 304, 519, 942, 1391
PspPI GGNCC 2 cut(s) 553, 1390
PspPPI RGGWCCY 1 cut(s) 1390
PspXI VCTCGAGB 1 cut(s) 1172
PsuI RGATCY 3 cut(s) 792, 940, 964
PvuII CAGCTG 1 cut(s) 559
RsaI GTAC 3 cut(s) 864, 1041, 1077
RsaNI GTAC 3 cut(s) 863, 1040, 1076
RseI CAYNNNNRTG 1 cut(s) 296
SalI GTCGAC 1 cut(s) 758
SaqAI TTAA 1 cut(s) 1425
SatI GCNGC 2 cut(s) 328, 1731
Sau3AI GATC 6 cut(s) 792, 940, 964, 1023, 1522, 1825
Sau96I GGNCC 2 cut(s) 553, 1390
SchI GAGTC 5 cut(s) 613, 889, 1468, 1607, 1825
ScrFI CCNGG 1 cut(s) 150
SduI GDGCHC 2 cut(s) 1436, 1678
SfaNI GCATC 4 cut(s) 520, 670, 1019, 1819
Sfr274I CTCGAG 1 cut(s) 1172
SgrAI CRCCGGYG 1 cut(s) 48
SinI GGWCC 2 cut(s) 553, 1390
SlaI CTCGAG 1 cut(s) 1172
SmiMI CAYNNNNRTG 1 cut(s) 296
SmlI CTYRAG 6 cut(s) 675, 935, 1172, 1463, 1769, 1834
SmoI CTYRAG 6 cut(s) 675, 935, 1172, 1463, 1769, 1834
Sse9I AATT 9 cut(s) 732, 782, 956, 1093, 1313, 1325, 1474, 1611, 1786
SsiI CCGC 5 cut(s) 9, 15, 36, 327, 1211
SspI AATATT 1 cut(s) 1571
SspMI CTAG 4 cut(s) 570, 819, 1007, 1530
StyD4I CCNGG 1 cut(s) 148
StyI CCWWGG 1 cut(s) 534
TaiI ACGT 3 cut(s) 300, 1359, 1851
TaqI TCGA 4 cut(s) 243, 759, 1173, 1601
TaqII GACCGA 1 cut(s) 113
TasI AATT 9 cut(s) 732, 782, 956, 1093, 1313, 1325, 1474, 1611, 1786
TatI WGTACW 3 cut(s) 862, 1039, 1075
TauI GCSGC 1 cut(s) 330
TfiI GAWTC 8 cut(s) 198, 335, 929, 1126, 1184, 1342, 1779, 1852
Tru1I TTAA 1 cut(s) 1425
Tru9I TTAA 1 cut(s) 1425
TscAI CASTG 5 cut(s) 166, 337, 363, 1240, 1441
TseFI GTSAC 3 cut(s) 157, 1238, 1838
TseI GCWGC 1 cut(s) 1730
Tsp45I GTSAC 3 cut(s) 157, 1238, 1838
TspGWI ACGGA 2 cut(s) 1006, 1208
TspRI CASTG 5 cut(s) 166, 337, 363, 1240, 1441
VneI GTGCAC 1 cut(s) 1432
VpaK11BI GGWCC 2 cut(s) 553, 1390
XapI RAATTY 2 cut(s) 956, 1474
XceI RCATGY 1 cut(s) 1046
XhoI CTCGAG 1 cut(s) 1172
XmiI GTMKAC 1 cut(s) 759
XspI CTAG 4 cut(s) 570, 819, 1007, 1530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.