Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009188

Physical Location & Seq

Genomic Coordinates Forward (+)

17044932 .. 17051062

Gene Structure 6131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G40840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2868 bp

ATGATGAATCTAGGATCTCTTTCGTTGAGTACGAGCAAGTCGAGTAAGCCAATGGTTAGCATCAGCTTTTGGATACCGTATTTCACTCACTGGGGAGAGAGCCTGCTGGTCTGTGGCTCGGCTCCTGGACTTGGTTCCGGGAATGTGAAAAAAGGTTTGCTGCTAAAGCCATCCCAGCAAGATGATCAGCTCATCTGGAGTGGCTCTGTCTCGGTTCCACCTGGGTTTAGCTCTGACTATTGTTACTATGTGGTGGATGACTCGAAGAGTGTGTTAAGGTCGGAGTTTGGGATGAAACGAAAACTTGTGGTGCCTGAGACATTGACCGGTGGAGAGTCTGTTCATCTTCGTGATCTCTGGCAGAGTGGGGATCAAGCTCTTCCATTTAGAAGTGCATTTAAAGATGTCATCTTCCACCACAGTTTCGATGTGAAAGTAGAAAAACCTCTAGGGGTCTTTATGAATAAGTCAGATCAAGATGATTCAGTTGTTGTCCAATTCAAAATCTGTTGTCCAGACATTGGAGAGGGAACATCTGTGTATGTTCTAGGCACCCCAGAAAAGTTGGGGAATTGGAAAGTTGAAAATGGACTTAGACTCAACTATGTCGATGATTCCATATGGGAAGCAGATTGCTTGATCCCTAAAGCAGACTTTCCTATCAAATATAGATACTGTAAAGTTCAGAAGGAAGATAGCATAGGGTTTGAATCTGGTGGTAATCGGGAGCTGTCTCTTCACTCCATCGGTAGTAAACAGGAATACATTGTCATGTCAGATGGCTTGTTTCGAGCAATGCCATGGAGGGGTGCTGGTGTAGCAGTTCCCATGTTCTCTGTAAGGTCAGAAGATGATGTTGGTGTGGGAGAGTTTCTCGATCTGAAGTTGCTTGTTGATTGGGCTGTAGATTCCGGGTTGCATCTAGTACAACTTTTACCAGTAAATGACACATCCGTTCATAAGATGTGGTGGGACTCGTATCCCTACAGCTCGTTATCTGTGTTTGCATTGCATCCATTATATCTTAGAGTGCAGGCTCTCTCTGAACGTCTGCCAGAAGATATCAAGGAAGAAATTCAGAAGGCGAAGAATCAACTGGACAAGAATGATGTTGATTATGAGGCTACCATGGAAACTAAGCTTTCAATTGCCAAGAAAATCTTTGACATAGAGAAAGACCAGACTTTGAACTCAAGCACCTTCCAGAAATTCTTCTCTGAAAACGAGGGCTGGTTGAAACCATATGCAGCTTTCTGCTTCCTTCGTGACTTTTTTGAGACTTCAGATCATAGTCAGTGGGGGACCTTTTCTGACTATACAGACGACAAGCTTGAAAAATTGATATCCAAGGACAACTTGCACTATAACACTATATGCTTCCACTACTACATTCAGTACCATTTACATGTACAATTGTCAGCAGCAGCAGAATATGCAAGGAAGAAAGGAGTTGTGCTGAAAGGAGACCTACCTATTGGCGTTGACAGAAACAGTGTTGATACGTGGGTTTACAGGAATCTGTTTCGCATGAATACGTCAACTGGAGCACCTCCAGACTATTTTGACAAAAATGGTCAGAACTGGGGATTTCCTACTTATAACTGGGAGGAAATGTCAAAAGACAACTATGCCTGGTGGCGTGCTCGCCTAACACAGATGGGGAAATATTTCACAGCATACAGGATTGATCATATATTGGGATTCTTCAGAATCTGGGAGCTTCCAGCTCATGCTATGACTGGTTTAGTGGGGAAGTTCCGTCCATCTATTCCTTTAAGTCAGGAAGAGTTGGAAAAGGAGGGAATATGGGATTTTGACCGCTTAAGCAAGCCCTATATCCAGAAGAAGTTTCTTGAGGAGAAATTTGGAGATTTTTGGCCTTTTATTGCATCAAACTTTCTTAATGAAACTCAGAAGGACATGTATGAGTTCAAGGAGGACTGCAACACAGAGAAGAAGATTGTAGCAAAGCTGAAGTCATTGGCTGAGAAGTCTTTGTTGCTAGAAAATGAGGACAAAGTTCGACGTGATGTCTTTGACATTTTACGGAATGTTGTTCTGATCAAAGATCCAGAGGATGCAAGAAAATTCTATCCTCGCTTTAATATTGAGGATACTTCAAGCTTCCAGGATTTGGATGATCACAGCAAAAATGTTCTGAAGAGGCTATACTATGACTACTATTTCCAACGCCAAGAGGATCTATGGAGAAAAAATGCTTTGAAAACCTTGCCTGCTCTGTTGAATTCATCTAATATGCTGGCATGTGGGGAGGATCTGGGTCTCATTCCATCTTGTGTACATCCTGTTATGCAAGAACTGGGATTGGTTGGCCTTCGCATCCAGCGCATGCCAAGTGAGTCCGATGTGAAGTTTGGGATTCCGTCTAATTATGACTATATGACGGTGTGTGCTCCTTCATGCCACGACTGCTCTACCCTGCGAGCTTGGTGGGAAGAGGACGAAGAGAGAAGACAGCAGTACTTCAAGGAAGTGATTGGTGTAGATGGAATCCCTCCAAGTCAGTGTATTCCAGAGATAACTCATTTCATTCTGAGGCAACATGTTGAAGCTCCATCAATGTGGGCTATTTTCCCGCTTCAGGATATGATGGCTCTGAAAGAAGAGTACACTACTCGTCCTGCAACAGAGGAGACAATCAATGATCCAACAAACCCCAAACACTACTGGAGATACCGCGTACACGTGACTTTGGACTCGCTTCTAAAGGACACTGACCTGAAGTCAACCATCAAGAACCTCGTTTCCAGCAGTGGAAGATCTGTTCCTGCTAATGTTTCTGGTGAAGACATCAACAAAAGCCGAGGAGAAGTTATAGCCAATGGCTCGACTAAGCCAAACCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000023 GO:0000025 GO:0000272 GO:0001871 GO:0003674 GO:0003824 GO:0004133 GO:0004134 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0005984 GO:0006073 GO:0006091 GO:0006112 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009311 GO:0009313 GO:0009987 GO:0010297 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0030246 GO:0030247 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046352 GO:0055114 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

CBM_20 Glyco_hydro_77

Protein Analysis

955

Amino Acids

109.78

Weight (kDa)

5.54

Isoelectric Point (pI)

38.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBM_20	PF00686	19 - 110	1.3e-20	Starch binding domain
CBM_20	PF00686	163 - 249	1e-12	Starch binding domain
Glyco_hydro_77	PF02446	275 - 903	7e-146	4-alpha-glucanotransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40840
fragaria_vesca	FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260
malus_domestica	MD00G1025200.v1.1
prunus_persica	Prupe.7G019400_v2.0.a1 Prupe.7G019400_v2.0.a1 Prupe.7G019400_v2.0.a1
pyrus_communis	pycom12g09050
rosa_chinensis	RchiOBHm_Chr3g0494731
rosa_laevigata	RLG00000022663
rosa_multiflora	Rmu_sc0000198.1_g000016
rosa_roxburghii	Rroxscaffold_6G00390950
rosa_rugosa	Rorug03G0268100
rosa_samantha	Rh3AG316600 Rh3BG351900 Rh3CG349000 Rh3DG351500
rosa_wichuraiana	Rw3G027630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1599
AccB1I	GGYRCC	2 cut(s)	310, 551
AccB7I	CCANNNNNTGG	2 cut(s)	521, 2134
AccII	CGCG	1 cut(s)	2700
AciI	CCGC	3 cut(s)	1819, 2597, 2698
AclWI	GGATC	7 cut(s)	22, 378, 634, 2063, 2208, 2283, 2660
AcsI	RAATTY	5 cut(s)	1074, 1208, 1862, 2087, 2245
AcuI	CTGAAG	7 cut(s)	902, 1266, 1690, 1994, 2180, 2585, 2762
AcvI	CACGTG	1 cut(s)	2707
AfaI	GTAC	8 cut(s)	31, 927, 1397, 1410, 2301, 2483, 2630, 2703
AfiI	CCNNNNNNNGG	5 cut(s)	131, 521, 806, 2134, 2602
AflII	CTTAAG	1 cut(s)	1822
AflIII	ACRYGT	4 cut(s)	1405, 1920, 2563, 2704
AgeI	ACCGGT	1 cut(s)	326
AhdI	GACNNNNNGTC	2 cut(s)	2030, 2743
AjiI	CACGTC	1 cut(s)	2027
AjnI	CCWGG	4 cut(s)	124, 220, 1631, 2127
AjuI	GAANNNNNNNTTGG	2 cut(s)	840, 872
AloI	GAACNNNNNNTCC	6 cut(s)	324, 356, 2750, 2769, 2782, 2801
Alw21I	GWGCWC	3 cut(s)	1549, 1645, 2416
Alw26I	GTCTC	7 cut(s)	214, 311, 738, 1271, 1458, 2288, 2648
AlwI	GGATC	7 cut(s)	22, 378, 634, 2063, 2208, 2283, 2660
AlwNI	CAGNNNCTG	1 cut(s)	1713
AoxI	GGCC	2 cut(s)	1877, 2332
ApeKI	GCWGC	4 cut(s)	160, 1247, 1421, 1424
ApoI	RAATTY	5 cut(s)	1074, 1208, 1862, 2087, 2245
ArsI	GACNNNNNNTTYG	2 cut(s)	1961, 1993
AsiGI	ACCGGT	1 cut(s)	326
Asp700I	GAANNNNTTC	3 cut(s)	1074, 1211, 1667
AspLEI	GCGC	1 cut(s)	2349
AspS9I	GGNCC	1 cut(s)	1302
AsuC2I	CCSGG	2 cut(s)	139, 913
AsuHPI	GGTGA	1 cut(s)	2816
AvaII	GGWCC	1 cut(s)	1302
BaeI	ACNNNNGTAYC	2 cut(s)	1491, 1524
BanI	GGYRCC	2 cut(s)	310, 551
BarI	GAAGNNNNNNTAC	2 cut(s)	2153, 2185
BbrPI	CACGTG	1 cut(s)	2707
BbsI	GAAGAC	2 cut(s)	2479, 2814
Bbv12I	GWGCWC	3 cut(s)	1549, 1645, 2416
BbvI	GCAGC	4 cut(s)	147, 1259, 1433, 1436
BciT130I	CCWGG	4 cut(s)	126, 222, 1633, 2129
BciVI	GTATCC	3 cut(s)	66, 990, 2107
BclI	TGATCA	4 cut(s)	184, 1687, 2061, 2140
BcnI	CCSGG	2 cut(s)	139, 913
BcoDI	GTCTC	7 cut(s)	214, 311, 738, 1271, 1458, 2288, 2648
BfaI	CTAG	5 cut(s)	11, 449, 548, 923, 2003
BfmI	CTRYAG	2 cut(s)	903, 985
BfrI	CTTAAG	1 cut(s)	1822
BfuI	GTATCC	3 cut(s)	66, 990, 2107
BglII	AGATCT	1 cut(s)	2780
BisI	GCNGC	4 cut(s)	161, 1248, 1422, 1425
BlsI	GCNGC	4 cut(s)	162, 1249, 1423, 1426
BmcAI	AGTACT	1 cut(s)	2483
Bme1390I	CCNGG	6 cut(s)	126, 139, 222, 913, 1633, 2129
Bme18I	GGWCC	1 cut(s)	1302
BmeRI	GACNNNNNGTC	2 cut(s)	2030, 2743
BmgBI	CACGTC	1 cut(s)	2027
BmgT120I	GGNCC	1 cut(s)	1302
BmiI	GGNNCC	6 cut(s)	123, 136, 216, 312, 553, 1303
BmrFI	CCNGG	6 cut(s)	126, 139, 222, 913, 1633, 2129
BmrI	ACTGGG	4 cut(s)	100, 1591, 1612, 2330
BmsI	GCATC	6 cut(s)	69, 928, 1021, 1898, 2068, 2349
BmuI	ACTGGG	4 cut(s)	100, 1591, 1612, 2330
BpiI	GAAGAC	2 cut(s)	2479, 2814
BplI	GAGNNNNNCTC	2 cut(s)	858, 890
BpmI	CTGGAG	4 cut(s)	217, 1536, 1563, 2710
BpuEI	CTTGAG	2 cut(s)	1177, 1874
BpuMI	CCSGG	2 cut(s)	139, 913
BsaAI	YACGTR	2 cut(s)	1503, 2707
BsaI	GGTCTC	2 cut(s)	1458, 2288
BsaJI	CCNNGG	5 cut(s)	221, 800, 1128, 1347, 2824
BsaWI	WCCGGW	1 cut(s)	326
BsaXI	ACNNNNNCTCC	4 cut(s)	324, 354, 1598, 1628
Bsc4I	CCNNNNNNNGG	5 cut(s)	131, 521, 806, 2134, 2602
Bse118I	RCCGGY	1 cut(s)	326
Bse1I	ACTGG	9 cut(s)	95, 938, 1101, 1546, 1586, 1607, 1744, 2325, 2693
Bse3DI	GCAATG	2 cut(s)	801, 1007
BseBI	CCWGG	4 cut(s)	126, 222, 1633, 2129
BseDI	CCNNGG	5 cut(s)	221, 800, 1128, 1347, 2824
BseGI	GGATG	9 cut(s)	170, 262, 297, 950, 1012, 2083, 2143, 2302, 2340
BseLI	CCNNNNNNNGG	5 cut(s)	131, 521, 806, 2134, 2602
BseMI	GCAATG	2 cut(s)	801, 1007
BseMII	CTCAG	4 cut(s)	306, 1925, 1977, 2546
BseNI	ACTGG	9 cut(s)	95, 938, 1101, 1546, 1586, 1607, 1744, 2325, 2693
BseRI	GAGGAG	3 cut(s)	1871, 2666, 2841
BseXI	GCAGC	4 cut(s)	147, 1259, 1433, 1436
BseYI	CCCAGC	1 cut(s)	174
BsgI	GTGCAG	1 cut(s)	1052
Bsh1236I	CGCG	1 cut(s)	2700
BshFI	GGCC	2 cut(s)	1879, 2334
BshNI	GGYRCC	2 cut(s)	310, 551
BshTI	ACCGGT	1 cut(s)	326
BsiHKAI	GWGCWC	3 cut(s)	1549, 1645, 2416
BsiSI	CCGG	3 cut(s)	138, 327, 912
BslFI	GGGAC	2 cut(s)	986, 1315
BslI	CCNNNNNNNGG	5 cut(s)	131, 521, 806, 2134, 2602
BsmAI	GTCTC	7 cut(s)	214, 311, 738, 1271, 1458, 2288, 2648
BsmFI	GGGAC	2 cut(s)	986, 1315
BsnI	GGCC	2 cut(s)	1879, 2334
Bso31I	GGTCTC	2 cut(s)	1458, 2288
Bsp1286I	GDGCHC	3 cut(s)	1549, 1645, 2416
Bsp1407I	TGTACA	2 cut(s)	1408, 2299
Bsp19I	CCATGG	2 cut(s)	800, 1128
BspACI	CCGC	3 cut(s)	1819, 2597, 2698
BspANI	GGCC	2 cut(s)	1879, 2334
BspCNI	CTCAG	4 cut(s)	307, 1924, 1978, 2547
BspFNI	CGCG	1 cut(s)	2700
BspLI	GGNNCC	6 cut(s)	123, 136, 216, 312, 553, 1303
BspPI	GGATC	7 cut(s)	22, 378, 634, 2063, 2208, 2283, 2660
BspQI	GCTCTTC	1 cut(s)	384
BspT107I	GGYRCC	2 cut(s)	310, 551
BspTI	CTTAAG	1 cut(s)	1822
BspTNI	GGTCTC	2 cut(s)	1458, 2288
BsrDI	GCAATG	2 cut(s)	801, 1007
BsrFI	RCCGGY	1 cut(s)	326
BsrGI	TGTACA	2 cut(s)	1408, 2299
BsrI	ACTGG	9 cut(s)	95, 938, 1101, 1546, 1586, 1607, 1744, 2325, 2693
BssAI	RCCGGY	1 cut(s)	326
BssECI	CCNNGG	5 cut(s)	221, 800, 1128, 1347, 2824
BssT1I	CCWWGG	3 cut(s)	800, 1128, 1347
Bst2UI	CCWGG	4 cut(s)	126, 222, 1633, 2129
Bst4CI	ACNGT	5 cut(s)	78, 422, 677, 1493, 2407
Bst6I	CTCTTC	8 cut(s)	260, 384, 741, 1779, 2156, 2451, 2460, 2619
BstAFI	CTTAAG	1 cut(s)	1822
BstAPI	GCANNNNNTGC	1 cut(s)	1433
BstAUI	TGTACA	2 cut(s)	1408, 2299
BstBAI	YACGTR	2 cut(s)	1503, 2707
BstC8I	GCNNGC	9 cut(s)	104, 1035, 1641, 1645, 1829, 2235, 2262, 2351, 2445
BstDEI	CTNAG	8 cut(s)	315, 593, 1025, 1137, 1911, 1986, 2555, 2853
BstDSI	CCRYGG	2 cut(s)	800, 1128
BstF5I	GGATG	9 cut(s)	170, 262, 297, 950, 1012, 2083, 2143, 2302, 2340
BstFNI	CGCG	1 cut(s)	2700
BstHHI	GCGC	1 cut(s)	2349
BstMAI	GTCTC	7 cut(s)	214, 311, 738, 1271, 1458, 2288, 2648
BstMWI	GCNNNNNNNGC	6 cut(s)	166, 175, 818, 1433, 2346, 2430
BstNI	CCWGG	4 cut(s)	126, 222, 1633, 2129
BstNSI	RCATGY	5 cut(s)	1409, 1924, 2268, 2353, 2567
BstSCI	CCNGG	6 cut(s)	124, 137, 220, 911, 1631, 2127
BstSFI	CTRYAG	2 cut(s)	903, 985
BstUI	CGCG	1 cut(s)	2700
BstV1I	GCAGC	4 cut(s)	147, 1259, 1433, 1436
BstV2I	GAAGAC	2 cut(s)	2479, 2814
BstX2I	RGATCY	5 cut(s)	14, 2068, 2200, 2275, 2780
BstXI	CCANNNNNNTGG	1 cut(s)	2583
BstYI	RGATCY	5 cut(s)	14, 2068, 2200, 2275, 2780
BsuI	GTATCC	3 cut(s)	66, 990, 2107
BsuRI	GGCC	2 cut(s)	1879, 2334
BtgI	CCRYGG	2 cut(s)	800, 1128
BtrI	CACGTC	1 cut(s)	2027
BtsCI	GGATG	9 cut(s)	170, 262, 297, 950, 1012, 2083, 2143, 2302, 2340
BtsI	GCAGTG	1 cut(s)	2779
BtsIMutI	CAGTG	6 cut(s)	88, 1301, 1498, 2531, 2733, 2779
Cac8I	GCNNGC	9 cut(s)	104, 1035, 1641, 1645, 1829, 2235, 2262, 2351, 2445
CaiI	CAGNNNCTG	1 cut(s)	1713
CfoI	GCGC	1 cut(s)	2349
Cfr10I	RCCGGY	1 cut(s)	326
Cfr13I	GGNCC	1 cut(s)	1302
Csp6I	GTAC	8 cut(s)	30, 926, 1396, 1409, 2300, 2482, 2629, 2702
CspAI	ACCGGT	1 cut(s)	326
CviQI	GTAC	8 cut(s)	30, 926, 1396, 1409, 2300, 2482, 2629, 2702
DdeI	CTNAG	8 cut(s)	315, 593, 1025, 1137, 1911, 1986, 2555, 2853
DraI	TTTAAA	1 cut(s)	400
DriI	GACNNNNNGTC	2 cut(s)	2030, 2743
Eam1104I	CTCTTC	8 cut(s)	260, 384, 741, 1779, 2156, 2451, 2460, 2619
Eam1105I	GACNNNNNGTC	2 cut(s)	2030, 2743
EarI	CTCTTC	8 cut(s)	260, 384, 741, 1779, 2156, 2451, 2460, 2619
Eco130I	CCWWGG	3 cut(s)	800, 1128, 1347
Eco31I	GGTCTC	2 cut(s)	1458, 2288
Eco32I	GATATC	2 cut(s)	1063, 1344
Eco47I	GGWCC	1 cut(s)	1302
Eco57I	CTGAAG	7 cut(s)	902, 1266, 1690, 1994, 2180, 2585, 2762
Eco72I	CACGTG	1 cut(s)	2707
EcoO109I	RGGNCCY	1 cut(s)	1302
EcoRI	GAATTC	1 cut(s)	2245
EcoRII	CCWGG	4 cut(s)	124, 220, 1631, 2127
EcoRV	GATATC	2 cut(s)	1063, 1344
EcoT14I	CCWWGG	3 cut(s)	800, 1128, 1347
ErhI	CCWWGG	3 cut(s)	800, 1128, 1347
FalI	AAGNNNNNCTT	4 cut(s)	1145, 1177, 1340, 1372
FaqI	GGGAC	2 cut(s)	986, 1315
FauI	CCCGC	1 cut(s)	2604
FauNDI	CATATG	2 cut(s)	620, 1243
FbaI	TGATCA	4 cut(s)	184, 1687, 2061, 2140
Fnu4HI	GCNGC	4 cut(s)	161, 1248, 1422, 1425
FokI	GGATG	9 cut(s)	157, 269, 304, 937, 999, 2090, 2150, 2289, 2327
Fsp4HI	GCNGC	4 cut(s)	161, 1248, 1422, 1425
FspBI	CTAG	5 cut(s)	11, 449, 548, 923, 2003
GlaI	GCGC	1 cut(s)	2348
GluI	GCNGC	4 cut(s)	161, 1248, 1422, 1425
GsaI	CCCAGC	1 cut(s)	178
GsuI	CTGGAG	4 cut(s)	217, 1536, 1563, 2710
HaeIII	GGCC	2 cut(s)	1879, 2334
HapII	CCGG	3 cut(s)	138, 327, 912
HhaI	GCGC	1 cut(s)	2349
Hin6I	GCGC	1 cut(s)	2347
HinP1I	GCGC	1 cut(s)	2347
HincII	GTYRAC	3 cut(s)	1483, 1539, 2748
HindII	GTYRAC	3 cut(s)	1483, 1539, 2748
HindIII	AAGCTT	3 cut(s)	1139, 1328, 2122
HpaII	CCGG	3 cut(s)	138, 327, 912
HphI	GGTGA	1 cut(s)	2816
Hpy166II	GTNNAC	8 cut(s)	755, 1483, 1510, 1539, 2300, 2631, 2704, 2748
Hpy8I	GTNNAC	8 cut(s)	755, 1483, 1510, 1539, 2300, 2631, 2704, 2748
Hpy99I	CGWCG	1 cut(s)	2028
HpyAV	CCTTC	7 cut(s)	682, 1075, 1210, 1271, 1909, 2345, 2427
HpyCH4III	ACNGT	5 cut(s)	78, 422, 677, 1493, 2407
HpyCH4IV	ACGT	5 cut(s)	1048, 1502, 1535, 2026, 2706
HpyF10VI	GCNNNNNNNGC	6 cut(s)	166, 175, 818, 1433, 2346, 2430
HpyF3I	CTNAG	8 cut(s)	315, 593, 1025, 1137, 1911, 1986, 2555, 2853
HpySE526I	ACGT	5 cut(s)	1048, 1502, 1535, 2026, 2706
HspAI	GCGC	1 cut(s)	2347
Ksp22I	TGATCA	4 cut(s)	184, 1687, 2061, 2140
LguI	GCTCTTC	1 cut(s)	384
LmnI	GCTCC	6 cut(s)	127, 727, 1544, 1717, 2419, 2578
Lsp1109I	GCAGC	4 cut(s)	147, 1259, 1433, 1436
LweI	GCATC	6 cut(s)	69, 928, 1021, 1898, 2068, 2349
MaeI	CTAG	5 cut(s)	11, 449, 548, 923, 2003
MaeII	ACGT	5 cut(s)	1048, 1502, 1535, 2026, 2706
MaeIII	GTNAC	3 cut(s)	242, 1265, 2707
MfeI	CAATTG	2 cut(s)	1146, 1412
MflI	RGATCY	5 cut(s)	14, 2068, 2200, 2275, 2780
MhlI	GDGCHC	3 cut(s)	1549, 1645, 2416
MlyI	GAGTC	6 cut(s)	254, 344, 591, 968, 2369, 2711
MmeI	TCCRAC	4 cut(s)	261, 1770, 2212, 2693
MroXI	GAANNNNTTC	3 cut(s)	1074, 1211, 1667
MseI	TTAA	6 cut(s)	275, 399, 1775, 1823, 1902, 2103
MslI	CAYNNNNRTG	4 cut(s)	348, 770, 1404, 2581
MspCI	CTTAAG	1 cut(s)	1822
MspI	CCGG	3 cut(s)	138, 327, 912
MspR9I	CCNGG	6 cut(s)	126, 139, 222, 913, 1633, 2129
MunI	CAATTG	2 cut(s)	1146, 1412
MvaI	CCWGG	4 cut(s)	126, 222, 1633, 2129
MvnI	CGCG	1 cut(s)	2700
MwoI	GCNNNNNNNGC	6 cut(s)	166, 175, 818, 1433, 2346, 2430
NciI	CCSGG	2 cut(s)	139, 913
NcoI	CCATGG	2 cut(s)	800, 1128
NdeI	CATATG	2 cut(s)	620, 1243
NlaIV	GGNNCC	6 cut(s)	123, 136, 216, 312, 553, 1303
NmeAIII	GCCGAG	2 cut(s)	98, 2849
NmuCI	GTSAC	2 cut(s)	1265, 2707
NspI	RCATGY	5 cut(s)	1409, 1924, 2268, 2353, 2567
PaeI	GCATGC	1 cut(s)	2353
PciI	ACATGT	3 cut(s)	1405, 1920, 2563
PciSI	GCTCTTC	1 cut(s)	384
PcsI	WCGNNNNNNNCGW	2 cut(s)	29, 38
PdmI	GAANNNNTTC	3 cut(s)	1074, 1211, 1667
PflMI	CCANNNNNTGG	2 cut(s)	521, 2134
PfoI	TCCNGGA	3 cut(s)	124, 137, 2127
PinAI	ACCGGT	1 cut(s)	326
PkrI	GCNGC	4 cut(s)	162, 1249, 1423, 1426
PleI	GAGTC	6 cut(s)	254, 343, 591, 968, 2368, 2711
PmaCI	CACGTG	1 cut(s)	2707
PmlI	CACGTG	1 cut(s)	2707
PpsI	GAGTC	6 cut(s)	254, 343, 591, 968, 2368, 2711
Ppu21I	YACGTR	2 cut(s)	1503, 2707
PpuMI	RGGWCCY	1 cut(s)	1302
PscI	ACATGT	3 cut(s)	1405, 1920, 2563
PsiI	TTATAA	1 cut(s)	1599
Psp5II	RGGWCCY	1 cut(s)	1302
Psp6I	CCWGG	4 cut(s)	124, 220, 1631, 2127
PspCI	CACGTG	1 cut(s)	2707
PspFI	CCCAGC	1 cut(s)	174
PspGI	CCWGG	4 cut(s)	124, 220, 1631, 2127
PspN4I	GGNNCC	6 cut(s)	123, 136, 216, 312, 553, 1303
PspPI	GGNCC	1 cut(s)	1302
PspPPI	RGGWCCY	1 cut(s)	1302
PstNI	CAGNNNCTG	1 cut(s)	1713
PsuI	RGATCY	5 cut(s)	14, 2068, 2200, 2275, 2780
RsaI	GTAC	8 cut(s)	31, 927, 1397, 1410, 2301, 2483, 2630, 2703
RsaNI	GTAC	8 cut(s)	30, 926, 1396, 1409, 2300, 2482, 2629, 2702
RseI	CAYNNNNRTG	4 cut(s)	348, 770, 1404, 2581
SapI	GCTCTTC	1 cut(s)	384
SaqAI	TTAA	6 cut(s)	275, 399, 1775, 1823, 1902, 2103
SatI	GCNGC	4 cut(s)	161, 1248, 1422, 1425
Sau96I	GGNCC	1 cut(s)	1302
ScaI	AGTACT	1 cut(s)	2483
SchI	GAGTC	6 cut(s)	254, 344, 591, 968, 2369, 2711
ScrFI	CCNGG	6 cut(s)	126, 139, 222, 913, 1633, 2129
SduI	GDGCHC	3 cut(s)	1549, 1645, 2416
SfaNI	GCATC	6 cut(s)	69, 928, 1021, 1898, 2068, 2349
SfcI	CTRYAG	2 cut(s)	903, 985
SinI	GGWCC	1 cut(s)	1302
SmiMI	CAYNNNNRTG	4 cut(s)	348, 770, 1404, 2581
SmlI	CTYRAG	3 cut(s)	1192, 1822, 1853
SmoI	CTYRAG	3 cut(s)	1192, 1822, 1853
SphI	GCATGC	1 cut(s)	2353
SsiI	CCGC	3 cut(s)	1819, 2597, 2698
SspI	AATATT	2 cut(s)	1667, 2107
SspMI	CTAG	5 cut(s)	11, 449, 548, 923, 2003
StyD4I	CCNGG	6 cut(s)	124, 137, 220, 911, 1631, 2127
StyI	CCWWGG	3 cut(s)	800, 1128, 1347
TaaI	ACNGT	5 cut(s)	78, 422, 677, 1493, 2407
TaiI	ACGT	5 cut(s)	1051, 1505, 1538, 2029, 2709
TaqI	TCGA	8 cut(s)	41, 263, 426, 609, 790, 876, 2023, 2849
TatI	WGTACW	5 cut(s)	925, 1408, 2299, 2481, 2628
Tru1I	TTAA	6 cut(s)	275, 399, 1775, 1823, 1902, 2103
Tru9I	TTAA	6 cut(s)	275, 399, 1775, 1823, 1902, 2103
TscAI	CASTG	6 cut(s)	95, 1301, 1498, 2531, 2740, 2779
TseFI	GTSAC	2 cut(s)	1265, 2707
TseI	GCWGC	4 cut(s)	160, 1247, 1421, 1424
Tsp45I	GTSAC	2 cut(s)	1265, 2707
TspGWI	ACGGA	4 cut(s)	943, 1748, 2062, 2373
TspRI	CASTG	6 cut(s)	95, 1301, 1498, 2531, 2740, 2779
Van91I	CCANNNNNTGG	2 cut(s)	521, 2134
Vha464I	CTTAAG	1 cut(s)	1822
VpaK11BI	GGWCC	1 cut(s)	1302
XapI	RAATTY	5 cut(s)	1074, 1208, 1862, 2087, 2245
XceI	RCATGY	5 cut(s)	1409, 1924, 2268, 2353, 2567
XmnI	GAANNNNTTC	3 cut(s)	1074, 1211, 1667
XspI	CTAG	5 cut(s)	11, 449, 548, 923, 2003
ZrmI	AGTACT	1 cut(s)	2483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.