Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000198.1

Orthogroup ID

OG0009188

Physical Location & Seq

Genomic Coordinates Reverse (-)

118737 .. 132715

Gene Structure 13979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000198.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

atgttacatttacaaagtgtccattctgttctcgtccatttcaaaatttgctgtccaaatatagaagaaggaacatcgatttacattactggtagtacctcaaagttggggaattggaaggcacaggatgggcttaaactgagctattctggaggaaacatttcttctgaaactggtccaaaccgcgaaattgctctcgactcgttaagtactgaaccaagataccttttccgttcagatggcatgttgcgagaaatgccttggcggggggctggtgttgcaatcccaatgttctctattagatcagaaactgatcttggtgttggagagtttcttgacctgaaattacttgttgactgggctgcagagtctggctttcatttagttcagcttttacccattaatgatacatccgtgtatggaatgtggtgggattcatatccttacagctcactttctgtatatgcattgcatcctttatacttgagagtacaggcactttcagaaaacatccccaaggatatcaaggtagagattcagaaggcaaaagaagaattggagggaaaggatgttgattacgaggctaccttgaccactaaactctcaattgcaaagaaaatatttgcccaagagaaggataagattctcagctccaattcgttccagaaatttttctctgagaatcaggaatggttgaaaccctatgcggccttctgttttttgcgggacttctttgaaacatcagatcacagtcaatggggtcggttttcccagttttcaatagaaaagctagagaaactcatctctaaagacagcattcactatcgtgaaatttgcttccattattacatccaatttcatttgcatatgcagctgtcggaagctgcagaatatgctagaaagaaaggagtagtattgaaaggagacttgcctattggtgtcggtagagacagtgtagatacgtgggtctatccaaatctgtttcgcatgaacacatctactggagctcctccagattattttgataaaaatgggcagaactggggtttccctacttacaattgggacgagatggccaaagacaattatgcctggtggcgtgctcgattgacacagatggcaaaatactttacagcttaccggattgaccatatattggggttctttcgtatctgggaactcccagagcatgccattactggtctcgttggaaaatttcgtccttccattcctctaagtcaggaagaacttgaaagagagggcatatgggactttgatcgcttggctcgtccatatatcccacaggaaattttacagattaagtttggagattcatggacttttattgcttcgagttttctgaatgaatatcagaagaaccgctatgagtttaaggaagactgcaacacagagaaaaaaattgcttccaagctgaagtcattttcaggaagatcgttgttgcagaatgaagaccacattaggcatgagctctttgatattttacagaatatagttctgataagggatccagaaaatccaaggaacttctatcctcgcttcaatctcgaagagacttcaagttttatggatttggatgatcactgcaagaatgtactgaaacggttatactatgattactacttccatcgacaagaaaatctttggcgtcaaaatgcattgaagacactgcctgctctgctgaactcatcggatatgctagcttgtggggaagatctggggcttattccttcttgtgtttatcctgtgatgcaagaacttggattaataggtttacgcattcaacgtatgcctagtgagcctgatctggagtttggtatcccttctcaatacaattatatgacagtgtgtgctccatcatgccatgactgttcaacgttgcgtgcttggtgggaagaagatgaagaaaggaggcagcgattttttagcagtatggtgggatctcacttgttgccacccagtcactgtgttccagagattgcaaatttcatcttaaggcaacattttgaagctccatcaatgtgggcaatttttcctcttcaggatttgttgattttgaaagaagaatacacaacacgccctgcaaaagaggagacgatcaatgacccgacaaatccgaagcattattggagataccgtgtacatgtgacattggaggctttgatcaaggataaagagctcacatctatcatcaaagacctcgtgcgtggaagtggaagatcacatccggggaaacaagctgagaaacaagtgattcaggaatcacctgttgcaaccacagagaagaagcagattgccagcagcaaagaaaaggctcaagtggcaactccactgaacggagtaccgcggaaggaagctgttgctgttcctaattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000023 GO:0000025 GO:0000272 GO:0001871 GO:0003674 GO:0003824 GO:0004133 GO:0004134 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0005984 GO:0006073 GO:0006091 GO:0006112 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009311 GO:0009313 GO:0009987 GO:0010297 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0030246 GO:0030247 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046352 GO:0055114 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

CBM_20 Glyco_hydro_77

Protein Analysis

797

Amino Acids

92.42

Weight (kDa)

6.02

Isoelectric Point (pI)

44.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40840
fragaria_vesca	FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260
malus_domestica	MD00G1025200.v1.1
prunus_persica	Prupe.7G019400_v2.0.a1 Prupe.7G019400_v2.0.a1 Prupe.7G019400_v2.0.a1
pyrus_communis	pycom12g09050
rosa_chinensis	RchiOBHm_Chr3g0494731
rosa_laevigata	RLG00000022663
rosa_multiflora	Rmu_sc0000198.1_g000016
rosa_roxburghii	Rroxscaffold_6G00390950
rosa_rugosa	Rorug03G0268100
rosa_samantha	Rh3AG316600 Rh3BG351900 Rh3CG349000 Rh3DG351500
rosa_wichuraiana	Rw3G027630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1156
AccII	CGCG	2 cut(s)	186, 2365
AciI	CCGC	7 cut(s)	184, 265, 707, 724, 1381, 2363, 2365
AclI	AACGTT	1 cut(s)	1895
AclWI	GGATC	3 cut(s)	1520, 1533, 1966
AcoI	YGGCCR	1 cut(s)	1074
AcsI	RAATTY	6 cut(s)	45, 668, 831, 1214, 1308, 2002
AcuI	CTGAAG	2 cut(s)	1454, 2042
AcyI	GRCGYC	1 cut(s)	1666
AfaI	GTAC	6 cut(s)	97, 211, 492, 1614, 2160, 2361
AfiI	CCNNNNNNNGG	4 cut(s)	266, 634, 1156, 2354
AflII	CTTAAG	1 cut(s)	2011
AflIII	ACRYGT	1 cut(s)	2161
AjnI	CCWGG	1 cut(s)	1091
AjuI	GAANNNNNNNTTGG	2 cut(s)	300, 332
AleI	CACNNNNGTG	1 cut(s)	825
Alw21I	GWGCWC	5 cut(s)	1009, 1105, 1491, 1873, 2199
Alw26I	GTCTC	5 cut(s)	918, 942, 1208, 1565, 2105
AlwI	GGATC	3 cut(s)	1520, 1533, 1966
AlwNI	CAGNNNCTG	3 cut(s)	311, 371, 1983
AoxI	GGCC	2 cut(s)	708, 1074
ApeKI	GCWGC	5 cut(s)	362, 871, 884, 1933, 2319
ApoI	RAATTY	6 cut(s)	45, 668, 831, 1214, 1308, 2002
AseI	ATTAAT	2 cut(s)	402, 1784
Asp700I	GAANNNNTTC	2 cut(s)	160, 671
AspS9I	GGNCC	1 cut(s)	176
AsuC2I	CCSGG	1 cut(s)	2247
AsuHPI	GGTGA	1 cut(s)	2274
AsuNHI	GCTAGC	1 cut(s)	1717
AvaII	GGWCC	1 cut(s)	176
BaeI	ACNNNNGTAYC	4 cut(s)	399, 432, 951, 984
BalI	TGGCCA	1 cut(s)	1076
BamHI	GGATCC	1 cut(s)	1525
BanII	GRGCYC	3 cut(s)	1009, 1491, 2199
BauI	CACGAG	1 cut(s)	2219
BbsI	GAAGAC	3 cut(s)	1404, 1476, 1688
Bbv12I	GWGCWC	5 cut(s)	1009, 1105, 1491, 1873, 2199
BbvI	GCAGC	5 cut(s)	349, 871, 883, 1945, 2331
BccI	CCATC	7 cut(s)	122, 233, 1066, 1111, 1653, 1882, 2041
BciT130I	CCWGG	1 cut(s)	1093
BciVI	GTATCC	1 cut(s)	1847
BclI	TGATCA	2 cut(s)	1597, 2181
BcnI	CCSGG	1 cut(s)	2247
BcoDI	GTCTC	5 cut(s)	918, 942, 1208, 1565, 2105
BfaI	CTAG	4 cut(s)	791, 897, 1718, 1812
BfmI	CTRYAG	2 cut(s)	363, 885
BfrI	CTTAAG	1 cut(s)	2011
BfuI	GTATCC	1 cut(s)	1847
BglII	AGATCT	1 cut(s)	1732
BisI	GCNGC	6 cut(s)	363, 708, 872, 885, 1934, 2320
BlsI	GCNGC	6 cut(s)	364, 709, 873, 886, 1935, 2321
BmcAI	AGTACT	1 cut(s)	211
Bme1390I	CCNGG	2 cut(s)	1093, 2247
Bme18I	GGWCC	1 cut(s)	176
BmgT120I	GGNCC	1 cut(s)	176
BmiI	GGNNCC	1 cut(s)	1527
BmrFI	CCNGG	2 cut(s)	1093, 2247
BmrI	ACTGGG	4 cut(s)	367, 766, 1051, 1971
BmsI	GCATC	2 cut(s)	481, 1758
BmtI	GCTAGC	1 cut(s)	1721
BmuI	ACTGGG	4 cut(s)	367, 766, 1051, 1971
BpiI	GAAGAC	3 cut(s)	1404, 1476, 1688
BpmI	CTGGAG	4 cut(s)	171, 996, 1023, 1847
BpuEI	CTTGAG	2 cut(s)	505, 2319
BpuMI	CCSGG	1 cut(s)	2247
Bsa29I	ATCGAT	1 cut(s)	77
BsaAI	YACGTR	1 cut(s)	963
BsaBI	GATNNNNATC	1 cut(s)	438
BsaHI	GRCGYC	1 cut(s)	1666
BsaI	GGTCTC	1 cut(s)	1208
BsaJI	CCNNGG	5 cut(s)	260, 516, 1538, 2246, 2363
BsaWI	WCCGGW	1 cut(s)	1140
BsaXI	ACNNNNNCTCC	4 cut(s)	991, 1021, 2140, 2170
Bsc4I	CCNNNNNNNGG	4 cut(s)	266, 634, 1156, 2354
Bse1I	ACTGG	8 cut(s)	94, 178, 362, 772, 1006, 1046, 1204, 1977
Bse3DI	GCAATG	1 cut(s)	467
Bse8I	GATNNNNATC	1 cut(s)	438
BseBI	CCWGG	1 cut(s)	1093
BseCI	ATCGAT	1 cut(s)	77
BseDI	CCNNGG	5 cut(s)	260, 516, 1538, 2246, 2363
BseGI	GGATG	8 cut(s)	133, 410, 472, 510, 574, 849, 1600, 2242
BseJI	GATNNNNATC	1 cut(s)	438
BseLI	CCNNNNNNNGG	4 cut(s)	266, 634, 1156, 2354
BseMI	GCAATG	1 cut(s)	467
BseMII	CTCAG	4 cut(s)	131, 661, 669, 2250
BseNI	ACTGG	8 cut(s)	94, 178, 362, 772, 1006, 1046, 1204, 1977
BseRI	GAGGAG	2 cut(s)	999, 2123
BseXI	GCAGC	5 cut(s)	349, 871, 883, 1945, 2331
Bsh1236I	CGCG	2 cut(s)	186, 2365
BshFI	GGCC	2 cut(s)	710, 1076
BshVI	ATCGAT	1 cut(s)	77
BsiHKAI	GWGCWC	5 cut(s)	1009, 1105, 1491, 1873, 2199
BsiSI	CCGG	2 cut(s)	1141, 2246
BslFI	GGGAC	3 cut(s)	740, 1079, 1283
BslI	CCNNNNNNNGG	4 cut(s)	266, 634, 1156, 2354
BsmAI	GTCTC	5 cut(s)	918, 942, 1208, 1565, 2105
BsmBI	CGTCTC	1 cut(s)	2105
BsmFI	GGGAC	3 cut(s)	740, 1079, 1283
BsmI	GAATGC	2 cut(s)	816, 1797
BsnI	GGCC	2 cut(s)	710, 1076
Bso31I	GGTCTC	1 cut(s)	1208
Bsp1286I	GDGCHC	5 cut(s)	1009, 1105, 1491, 1873, 2199
Bsp1407I	TGTACA	1 cut(s)	2158
BspACI	CCGC	7 cut(s)	184, 265, 707, 724, 1381, 2363, 2365
BspANI	GGCC	2 cut(s)	710, 1076
BspCNI	CTCAG	4 cut(s)	132, 660, 670, 2251
BspDI	ATCGAT	1 cut(s)	77
BspFNI	CGCG	2 cut(s)	186, 2365
BspLI	GGNNCC	1 cut(s)	1527
BspMAI	CTGCAG	2 cut(s)	367, 889
BspOI	GCTAGC	1 cut(s)	1721
BspPI	GGATC	3 cut(s)	1520, 1533, 1966
BspTI	CTTAAG	1 cut(s)	2011
BspTNI	GGTCTC	1 cut(s)	1208
BsrDI	GCAATG	1 cut(s)	467
BsrGI	TGTACA	1 cut(s)	2158
BsrI	ACTGG	8 cut(s)	94, 178, 362, 772, 1006, 1046, 1204, 1977
BssECI	CCNNGG	5 cut(s)	260, 516, 1538, 2246, 2363
BssNI	GRCGYC	1 cut(s)	1666
BssSI	CACGAG	1 cut(s)	2219
BssT1I	CCWWGG	3 cut(s)	260, 516, 1538
Bst2BI	CACGAG	1 cut(s)	2219
Bst2UI	CCWGG	1 cut(s)	1093
Bst4CI	ACNGT	7 cut(s)	752, 953, 1623, 1864, 1889, 1985, 2156
Bst6I	CTCTTC	2 cut(s)	1563, 2061
BstACI	GRCGYC	1 cut(s)	1666
BstAFI	CTTAAG	1 cut(s)	2011
BstAPI	GCANNNNNTGC	1 cut(s)	893
BstAUI	TGTACA	1 cut(s)	2158
BstBAI	YACGTR	1 cut(s)	963
BstC8I	GCNNGC	6 cut(s)	1101, 1191, 1692, 1719, 1902, 2317
BstDEI	CTNAG	5 cut(s)	140, 647, 678, 1235, 2259
BstDSI	CCRYGG	1 cut(s)	2363
BstF5I	GGATG	8 cut(s)	133, 410, 472, 510, 574, 849, 1600, 2242
BstFNI	CGCG	2 cut(s)	186, 2365
BstMAI	GTCTC	5 cut(s)	918, 942, 1208, 1565, 2105
BstMWI	GCNNNNNNNGC	7 cut(s)	256, 278, 871, 893, 1696, 1816, 2339
BstNI	CCWGG	1 cut(s)	1093
BstNSI	RCATGY	3 cut(s)	247, 1193, 2165
BstSCI	CCNGG	2 cut(s)	1091, 2245
BstSFI	CTRYAG	2 cut(s)	363, 885
BstUI	CGCG	2 cut(s)	186, 2365
BstV1I	GCAGC	5 cut(s)	349, 871, 883, 1945, 2331
BstV2I	GAAGAC	3 cut(s)	1404, 1476, 1688
BstX2I	RGATCY	3 cut(s)	1525, 1732, 1958
BstXI	CCANNNNNNTGG	1 cut(s)	2040
BstYI	RGATCY	3 cut(s)	1525, 1732, 1958
Bsu15I	ATCGAT	1 cut(s)	77
BsuI	GTATCC	1 cut(s)	1847
BsuRI	GGCC	2 cut(s)	710, 1076
BsuTUI	ATCGAT	1 cut(s)	77
BtgI	CCRYGG	1 cut(s)	2363
BtsCI	GGATG	8 cut(s)	133, 410, 472, 510, 574, 849, 1600, 2242
BtsI	GCAGTG	2 cut(s)	1600, 1685
BtsIMutI	CAGTG	6 cut(s)	958, 1600, 1685, 1869, 1981, 2348
Cac8I	GCNNGC	6 cut(s)	1101, 1191, 1692, 1719, 1902, 2317
CaiI	CAGNNNCTG	3 cut(s)	311, 371, 1983
Cfr13I	GGNCC	1 cut(s)	176
Cfr42I	CCGCGG	1 cut(s)	2366
ClaI	ATCGAT	1 cut(s)	77
CseI	GACGC	1 cut(s)	1655
Csp6I	GTAC	6 cut(s)	96, 210, 491, 1613, 2159, 2360
CviAII	CATG	8 cut(s)	244, 988, 1190, 1335, 1484, 1878, 1883, 2162
CviQI	GTAC	6 cut(s)	96, 210, 491, 1613, 2159, 2360
DdeI	CTNAG	5 cut(s)	140, 647, 678, 1235, 2259
EaeI	YGGCCR	1 cut(s)	1074
Eam1104I	CTCTTC	2 cut(s)	1563, 2061
EarI	CTCTTC	2 cut(s)	1563, 2061
Ecl136II	GAGCTC	3 cut(s)	1007, 1489, 2197
Eco130I	CCWWGG	3 cut(s)	260, 516, 1538
Eco24I	GRGCYC	3 cut(s)	1009, 1491, 2199
Eco31I	GGTCTC	1 cut(s)	1208
Eco32I	GATATC	1 cut(s)	523
Eco47I	GGWCC	1 cut(s)	176
Eco53kI	GAGCTC	3 cut(s)	1007, 1489, 2197
Eco57I	CTGAAG	2 cut(s)	1454, 2042
EcoICRI	GAGCTC	3 cut(s)	1007, 1489, 2197
EcoRII	CCWGG	1 cut(s)	1091
EcoRV	GATATC	1 cut(s)	523
EcoT14I	CCWWGG	3 cut(s)	260, 516, 1538
EcoT22I	ATGCAT	2 cut(s)	469, 1678
EcoT38I	GRGCYC	3 cut(s)	1009, 1491, 2199
ErhI	CCWWGG	3 cut(s)	260, 516, 1538
Esp3I	CGTCTC	1 cut(s)	2105
FaeI	CATG	8 cut(s)	247, 991, 1193, 1338, 1487, 1881, 1886, 2165
FalI	AAGNNNNNCTT	2 cut(s)	1644, 1676
FaqI	GGGAC	3 cut(s)	740, 1079, 1283
FatI	CATG	8 cut(s)	243, 987, 1189, 1334, 1483, 1877, 1882, 2161
FauI	CCCGC	2 cut(s)	258, 717
FauNDI	CATATG	2 cut(s)	867, 1265
FbaI	TGATCA	2 cut(s)	1597, 2181
Fnu4HI	GCNGC	6 cut(s)	363, 708, 872, 885, 1934, 2320
FokI	GGATG	8 cut(s)	140, 397, 459, 497, 581, 836, 1607, 2229
FriOI	GRGCYC	3 cut(s)	1009, 1491, 2199
Fsp4HI	GCNGC	6 cut(s)	363, 708, 872, 885, 1934, 2320
FspBI	CTAG	4 cut(s)	791, 897, 1718, 1812
GluI	GCNGC	6 cut(s)	363, 708, 872, 885, 1934, 2320
GsuI	CTGGAG	4 cut(s)	171, 996, 1023, 1847
HaeIII	GGCC	2 cut(s)	710, 1076
HapII	CCGG	2 cut(s)	1141, 2246
HgaI	GACGC	1 cut(s)	1655
Hin1I	GRCGYC	1 cut(s)	1666
Hin1II	CATG	8 cut(s)	247, 991, 1193, 1338, 1487, 1881, 1886, 2165
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HinfI	GANTC	9 cut(s)	200, 368, 434, 535, 643, 682, 1331, 2272, 2279
HpaII	CCGG	2 cut(s)	1141, 2246
HphI	GGTGA	1 cut(s)	2274
Hpy166II	GTNNAC	3 cut(s)	355, 1793, 2159
Hpy8I	GTNNAC	3 cut(s)	355, 1793, 2159
HpyAV	CCTTC	9 cut(s)	62, 112, 535, 628, 721, 1233, 1758, 1851, 2362
HpyCH4III	ACNGT	7 cut(s)	752, 953, 1623, 1864, 1889, 1985, 2156
HpyCH4IV	ACGT	3 cut(s)	962, 1804, 1895
HpyF10VI	GCNNNNNNNGC	7 cut(s)	256, 278, 871, 893, 1696, 1816, 2339
HpyF3I	CTNAG	5 cut(s)	140, 647, 678, 1235, 2259
HpySE526I	ACGT	3 cut(s)	962, 1804, 1895
Hsp92I	GRCGYC	1 cut(s)	1666
Hsp92II	CATG	8 cut(s)	247, 991, 1193, 1338, 1487, 1881, 1886, 2165
Ksp22I	TGATCA	2 cut(s)	1597, 2181
KspI	CCGCGG	1 cut(s)	2366
LmnI	GCTCC	5 cut(s)	656, 1004, 1012, 1876, 2035
Lsp1109I	GCAGC	5 cut(s)	349, 871, 883, 1945, 2331
LweI	GCATC	2 cut(s)	481, 1758
MaeI	CTAG	4 cut(s)	791, 897, 1718, 1812
MaeII	ACGT	3 cut(s)	962, 1804, 1895
MaeIII	GTNAC	3 cut(s)	3, 1979, 2164
MfeI	CAATTG	2 cut(s)	606, 1060
MflI	RGATCY	3 cut(s)	1525, 1732, 1958
MhlI	GDGCHC	5 cut(s)	1009, 1105, 1491, 1873, 2199
MlsI	TGGCCA	1 cut(s)	1076
MluNI	TGGCCA	1 cut(s)	1076
MlyI	GAGTC	2 cut(s)	194, 377
MmeI	TCCRAC	3 cut(s)	304, 858, 1189
Mox20I	TGGCCA	1 cut(s)	1076
Mph1103I	ATGCAT	2 cut(s)	469, 1678
MroXI	GAANNNNTTC	2 cut(s)	160, 671
MscI	TGGCCA	1 cut(s)	1076
MseI	TTAA	8 cut(s)	135, 206, 402, 1320, 1392, 1784, 2012, 2392
MslI	CAYNNNNRTG	2 cut(s)	825, 2038
Msp20I	TGGCCA	1 cut(s)	1076
MspA1I	CMGCKG	2 cut(s)	874, 2365
MspCI	CTTAAG	1 cut(s)	2011
MspI	CCGG	2 cut(s)	1141, 2246
MspR9I	CCNGG	2 cut(s)	1093, 2247
MunI	CAATTG	2 cut(s)	606, 1060
Mva1269I	GAATGC	2 cut(s)	816, 1797
MvaI	CCWGG	1 cut(s)	1093
MvnI	CGCG	2 cut(s)	186, 2365
MwoI	GCNNNNNNNGC	7 cut(s)	256, 278, 871, 893, 1696, 1816, 2339
NciI	CCSGG	1 cut(s)	2247
NdeI	CATATG	2 cut(s)	867, 1265
NheI	GCTAGC	1 cut(s)	1717
NlaIII	CATG	8 cut(s)	247, 991, 1193, 1338, 1487, 1881, 1886, 2165
NlaIV	GGNNCC	1 cut(s)	1527
NmuCI	GTSAC	2 cut(s)	1979, 2164
NsiI	ATGCAT	2 cut(s)	469, 1678
NspI	RCATGY	3 cut(s)	247, 1193, 2165
OliI	CACNNNNGTG	1 cut(s)	825
PaeI	GCATGC	1 cut(s)	1193
PciI	ACATGT	1 cut(s)	2161
PcsI	WCGNNNNNNNCGW	2 cut(s)	1285, 1801
PctI	GAATGC	2 cut(s)	816, 1797
PdmI	GAANNNNTTC	2 cut(s)	160, 671
PfeI	GAWTC	7 cut(s)	434, 535, 643, 682, 1331, 2272, 2279
PflMI	CCANNNNNTGG	1 cut(s)	1156
PkrI	GCNGC	6 cut(s)	364, 709, 873, 886, 1935, 2321
PleI	GAGTC	2 cut(s)	194, 376
PpsI	GAGTC	2 cut(s)	194, 376
Ppu21I	YACGTR	1 cut(s)	963
PscI	ACATGT	1 cut(s)	2161
PshBI	ATTAAT	2 cut(s)	402, 1784
Psp124BI	GAGCTC	3 cut(s)	1009, 1491, 2199
Psp1406I	AACGTT	1 cut(s)	1895
Psp6I	CCWGG	1 cut(s)	1091
PspGI	CCWGG	1 cut(s)	1091
PspN4I	GGNNCC	1 cut(s)	1527
PspPI	GGNCC	1 cut(s)	176
PstI	CTGCAG	2 cut(s)	367, 889
PstNI	CAGNNNCTG	3 cut(s)	311, 371, 1983
PsuI	RGATCY	3 cut(s)	1525, 1732, 1958
PvuII	CAGCTG	1 cut(s)	874
RsaI	GTAC	6 cut(s)	97, 211, 492, 1614, 2160, 2361
RsaNI	GTAC	6 cut(s)	96, 210, 491, 1613, 2159, 2360
RseI	CAYNNNNRTG	2 cut(s)	825, 2038
SacI	GAGCTC	3 cut(s)	1009, 1491, 2199
SacII	CCGCGG	1 cut(s)	2366
SaqAI	TTAA	8 cut(s)	135, 206, 402, 1320, 1392, 1784, 2012, 2392
SatI	GCNGC	6 cut(s)	363, 708, 872, 885, 1934, 2320
Sau96I	GGNCC	1 cut(s)	176
ScaI	AGTACT	1 cut(s)	211
SchI	GAGTC	2 cut(s)	194, 377
ScrFI	CCNGG	2 cut(s)	1093, 2247
SduI	GDGCHC	5 cut(s)	1009, 1105, 1491, 1873, 2199
SfaNI	GCATC	2 cut(s)	481, 1758
SfcI	CTRYAG	2 cut(s)	363, 885
Sfr303I	CCGCGG	1 cut(s)	2366
SgrBI	CCGCGG	1 cut(s)	2366
SinI	GGWCC	1 cut(s)	176
SmiMI	CAYNNNNRTG	2 cut(s)	825, 2038
SmlI	CTYRAG	3 cut(s)	484, 2011, 2334
SmoI	CTYRAG	3 cut(s)	484, 2011, 2334
SphI	GCATGC	1 cut(s)	1193
SsiI	CCGC	7 cut(s)	184, 265, 707, 724, 1381, 2363, 2365
SspI	AATATT	1 cut(s)	621
SspMI	CTAG	4 cut(s)	791, 897, 1718, 1812
SstI	GAGCTC	3 cut(s)	1009, 1491, 2199
StyD4I	CCNGG	2 cut(s)	1091, 2245
StyI	CCWWGG	3 cut(s)	260, 516, 1538
TaaI	ACNGT	7 cut(s)	752, 953, 1623, 1864, 1889, 1985, 2156
TaiI	ACGT	3 cut(s)	965, 1807, 1898
TaqI	TCGA	6 cut(s)	77, 198, 1105, 1352, 1566, 1648
TatI	WGTACW	4 cut(s)	209, 490, 1612, 2158
TauI	GCSGC	1 cut(s)	710
TfiI	GAWTC	7 cut(s)	434, 535, 643, 682, 1331, 2272, 2279
Tru1I	TTAA	8 cut(s)	135, 206, 402, 1320, 1392, 1784, 2012, 2392
Tru9I	TTAA	8 cut(s)	135, 206, 402, 1320, 1392, 1784, 2012, 2392
TscAI	CASTG	6 cut(s)	958, 1607, 1692, 1869, 1988, 2355
TseFI	GTSAC	2 cut(s)	1979, 2164
TseI	GCWGC	5 cut(s)	362, 871, 884, 1933, 2319
Tsp45I	GTSAC	2 cut(s)	1979, 2164
TspDTI	ATGAA	9 cut(s)	368, 426, 848, 1004, 1323, 1380, 1482, 1935, 1996
TspGWI	ACGGA	3 cut(s)	221, 403, 2370
TspRI	CASTG	6 cut(s)	958, 1607, 1692, 1869, 1988, 2355
Van91I	CCANNNNNTGG	1 cut(s)	1156
Vha464I	CTTAAG	1 cut(s)	2011
VpaK11BI	GGWCC	1 cut(s)	176
VspI	ATTAAT	2 cut(s)	402, 1784
XapI	RAATTY	6 cut(s)	45, 668, 831, 1214, 1308, 2002
XceI	RCATGY	3 cut(s)	247, 1193, 2165
XmnI	GAANNNNTTC	2 cut(s)	160, 671
XspI	CTAG	4 cut(s)	791, 897, 1718, 1812
ZrmI	AGTACT	1 cut(s)	211
Zsp2I	ATGCAT	2 cut(s)	469, 1678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.