Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0009188

Physical Location & Seq

Genomic Coordinates Forward (+)

41650213 .. 41662165

Gene Structure 11953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG349000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGTTGCGAGAAATGCCTTGGCGGGGGGCTGGTGTTGCAATCCCAATGTTCTCAATTAGATCAGAAACTGATCTTGGTGTTGGAGAGTTTCTTGACCTGAAATTACTTGTTGACTGGGCTGCAGAGTCTGGCTTTCATTTAGTTCAGCTTTTACCCATTAATGATACATCCGTGTATGGAATGTGGTGGGATTCATATCCTTACAGCTCACTTTCTGTATATGCATTGCATCCTTTATACTTGAGAGTACAGGCACTTTCAGAAAACATCCCCAAGGATATCAAGGTAGAGATTCAGAAGGCAAAAGAAGAATTGGAGGGAAAGGATGTTGATTACGAGGCTACCTTGACCACTAAACTCTCAATTGCAAAGAAAATATTTGCCCAAGAGAAGGATAAGATTCTCAGCTCCAATTCGTTCCAGAAATTTTTCTCTGAGAATCAGGAATGGTTGAAACCCTATGCGGCCTTCTGTTTTTTGCGGGACTTCTTTGAAACATCAGATCACAGTCAATGGGGTCGGTTTTCCCAGTTTTCAATAGAAAAGCTAGAGAAACTCATCTCTAAAGACAGCATTCACTATCGTGAAATTTGCTTCCATTATTACATCCAATTTCATTTGCATATGCAGCTGTCGGAAGCTGCAGAATATGCAAGAAAGAAAGGAGTAGTATTGAAAGGAGACTTGCCTATTGGTGTCGGTAGAGACAGTGTAGATACGTGGGTCTATCCAAATCTGTTTCGCATGAACACATCTACTGGAGCTCCTCCAGATTATTTTGATAAAAATGGGCAGAACTGGGGTTTCCCTACTTACAATTGGGACGAGATGGCCAAAGACAATTATGCCTGGTGGCGTGCTCGATTGACACAGATGGCAAAATACTTTACAGCTTACCGGATTGACCATGTATTGGGGTTCTTTCGTATCTGGGAACTCCCAGAGCATGCCATTACTGGTCTCGTTGGAAAATTTCGTCCTTCCATTCCTCTAAGTCAGGAAGAACTTGAAAGAGAGGGCATATGGGACTTTGATCGCTTGGCTCGTCCATATATCCCACAGGAAATTTTACAGATTAAGTTTGGAGATTCATGGACTTTTATTGCTTCAAGTTTTCTGAATGAATATCAGAAGAACCGCTATGAGTTTAAGGAAGACTGCAACACAGAGAAAAAAATTGCTTCTAAGCTGAAGTCATTTTCAGGAAGATCGTTGTTGCAGAATGAAGACCACATTAGGCATGAGCTCTTTGATATTTTACAGAATATAGTTCTGATAAGGGATCCAGAAAATCCAAGGAACTTCTATCCTCGCTTCAATCTCGAAGAGACTTCAAGTTTTAAGGATTTGGATGATCACTGCAAGAATGTACTGAAACGGTTATACTATGATTACTACTTCCATCGACAAGAAAATCTTTGGCGTCAAAATGCATTGAAGACACTGCCTGCTCTTCTGAACTCATCGGATATGCTAGCTTGTGGGGAAGATCTGGGGCTTATTCCTTCTTGTGTTTATCCTGTGATGCAAGAACTTGGATTAATAGGTTTACGCATTCAACGTATGCCTAGTGAGCCTGATCTGGAGTTTGGTATCCCTTCTCAATACAATTATATGACAGTGTGTGCTCCATCATGCCATGACTGTTCAACGTTGCGTGCTTGGTGGGAAGAAGATGAAGAAAGGAGGCAGCGATTTTTTAGCAGTATGGTGGGATCTCACTTGTTGCCACCCAGTCACTGTGTTCCAGAGATTGCAAATTTCATCTTAAGGCAACATTTTGAAGCTCCATCAATGTGGGCAATTTTTCCTCTTCAGGATTTGTTGATTTTGAAAGAAGAATACACAACACGCCCTGCAAAAGAGGAGACGATCAATGACCCGACAAATCCGAAGCATTATTGGAGATACCGTGTACATGTGACATTGGAGGCTTTGATCAAGGATAAAGAGCTCACATCGATCATCAAAGACCTCGTGCGTGGAAGTGGAAGATCACATCCGGGGAAACAAGCTGAGAAACAAGTGATTCAGGAATCACCTGTTGCAACCACAGAGAAGAAGCAGATTGCCAGCAGCAAAGAAAAGGCTCAAGTGGCAACTCCACTGAACGGAGTACCGCGGAAGGAAGCTGTTGCTGTTCCTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000023 GO:0000025 GO:0000272 GO:0001871 GO:0003674 GO:0003824 GO:0004133 GO:0004134 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0005984 GO:0006073 GO:0006091 GO:0006112 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009311 GO:0009313 GO:0009987 GO:0010297 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0030246 GO:0030247 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046352 GO:0055114 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

CBM_20 Glyco_hydro_77

Protein Analysis

716

Amino Acids

83.57

Weight (kDa)

6.04

Isoelectric Point (pI)

42.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_77	PF02446	14 - 641	3e-146	4-alpha-glucanotransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40840
fragaria_vesca	FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260 FvH4_1g29260
malus_domestica	MD00G1025200.v1.1
prunus_persica	Prupe.7G019400_v2.0.a1 Prupe.7G019400_v2.0.a1 Prupe.7G019400_v2.0.a1
pyrus_communis	pycom12g09050
rosa_chinensis	RchiOBHm_Chr3g0494731
rosa_laevigata	RLG00000022663
rosa_multiflora	Rmu_sc0000198.1_g000016
rosa_roxburghii	Rroxscaffold_6G00390950
rosa_rugosa	Rorug03G0268100
rosa_samantha	Rh3AG316600 Rh3BG351900 Rh3CG349000 Rh3DG351500
rosa_wichuraiana	Rw3G027630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	913
AccII	CGCG	1 cut(s)	2122
AciI	CCGC	6 cut(s)	22, 464, 481, 1138, 2120, 2122
AclI	AACGTT	1 cut(s)	1652
AclWI	GGATC	3 cut(s)	1277, 1290, 1723
AcoI	YGGCCR	1 cut(s)	831
AcsI	RAATTY	5 cut(s)	425, 588, 971, 1065, 1759
AcuI	CTGAAG	2 cut(s)	1211, 1799
AcyI	GRCGYC	1 cut(s)	1423
AfaI	GTAC	4 cut(s)	249, 1371, 1917, 2118
AfiI	CCNNNNNNNGG	4 cut(s)	23, 391, 913, 2111
AflII	CTTAAG	1 cut(s)	1768
AflIII	ACRYGT	1 cut(s)	1918
AjnI	CCWGG	1 cut(s)	848
AjuI	GAANNNNNNNTTGG	2 cut(s)	57, 89
AleI	CACNNNNGTG	1 cut(s)	582
Alw21I	GWGCWC	5 cut(s)	766, 862, 1248, 1630, 1956
Alw26I	GTCTC	5 cut(s)	675, 699, 965, 1322, 1862
AlwI	GGATC	3 cut(s)	1277, 1290, 1723
AlwNI	CAGNNNCTG	3 cut(s)	68, 128, 1740
AoxI	GGCC	2 cut(s)	465, 831
ApeKI	GCWGC	5 cut(s)	119, 628, 641, 1690, 2076
ApoI	RAATTY	5 cut(s)	425, 588, 971, 1065, 1759
AseI	ATTAAT	2 cut(s)	159, 1541
Asp700I	GAANNNNTTC	1 cut(s)	428
AsuC2I	CCSGG	1 cut(s)	2004
AsuHPI	GGTGA	1 cut(s)	2031
AsuNHI	GCTAGC	1 cut(s)	1474
BaeI	ACNNNNGTAYC	4 cut(s)	156, 189, 708, 741
BalI	TGGCCA	1 cut(s)	833
BamHI	GGATCC	1 cut(s)	1282
BanII	GRGCYC	3 cut(s)	766, 1248, 1956
BauI	CACGAG	1 cut(s)	1976
BbsI	GAAGAC	3 cut(s)	1161, 1233, 1445
Bbv12I	GWGCWC	5 cut(s)	766, 862, 1248, 1630, 1956
BbvI	GCAGC	5 cut(s)	106, 628, 640, 1702, 2088
BccI	CCATC	5 cut(s)	823, 868, 1410, 1639, 1798
BciT130I	CCWGG	1 cut(s)	850
BciVI	GTATCC	1 cut(s)	1604
BclI	TGATCA	2 cut(s)	1354, 1938
BcnI	CCSGG	1 cut(s)	2004
BcoDI	GTCTC	5 cut(s)	675, 699, 965, 1322, 1862
BfaI	CTAG	3 cut(s)	548, 1475, 1569
BfmI	CTRYAG	2 cut(s)	120, 642
BfrI	CTTAAG	1 cut(s)	1768
BfuI	GTATCC	1 cut(s)	1604
BglII	AGATCT	1 cut(s)	1489
BisI	GCNGC	6 cut(s)	120, 465, 629, 642, 1691, 2077
BlsI	GCNGC	6 cut(s)	121, 466, 630, 643, 1692, 2078
Bme1390I	CCNGG	2 cut(s)	850, 2004
BmiI	GGNNCC	1 cut(s)	1284
BmrFI	CCNGG	2 cut(s)	850, 2004
BmrI	ACTGGG	4 cut(s)	124, 523, 808, 1728
BmsI	GCATC	2 cut(s)	238, 1515
BmtI	GCTAGC	1 cut(s)	1478
BmuI	ACTGGG	4 cut(s)	124, 523, 808, 1728
BpiI	GAAGAC	3 cut(s)	1161, 1233, 1445
BpmI	CTGGAG	3 cut(s)	753, 780, 1604
BpuEI	CTTGAG	2 cut(s)	262, 2076
BpuMI	CCSGG	1 cut(s)	2004
Bsa29I	ATCGAT	1 cut(s)	1961
BsaAI	YACGTR	1 cut(s)	720
BsaBI	GATNNNNATC	1 cut(s)	195
BsaHI	GRCGYC	1 cut(s)	1423
BsaI	GGTCTC	1 cut(s)	965
BsaJI	CCNNGG	5 cut(s)	17, 273, 1295, 2003, 2120
BsaWI	WCCGGW	1 cut(s)	897
BsaXI	ACNNNNNCTCC	4 cut(s)	748, 778, 1897, 1927
Bsc4I	CCNNNNNNNGG	4 cut(s)	23, 391, 913, 2111
Bse1I	ACTGG	6 cut(s)	119, 529, 763, 803, 961, 1734
Bse3DI	GCAATG	1 cut(s)	224
Bse8I	GATNNNNATC	1 cut(s)	195
BseBI	CCWGG	1 cut(s)	850
BseCI	ATCGAT	1 cut(s)	1961
BseDI	CCNNGG	5 cut(s)	17, 273, 1295, 2003, 2120
BseGI	GGATG	7 cut(s)	167, 229, 267, 331, 606, 1357, 1999
BseJI	GATNNNNATC	1 cut(s)	195
BseLI	CCNNNNNNNGG	4 cut(s)	23, 391, 913, 2111
BseMI	GCAATG	1 cut(s)	224
BseMII	CTCAG	3 cut(s)	418, 426, 2007
BseNI	ACTGG	6 cut(s)	119, 529, 763, 803, 961, 1734
BseRI	GAGGAG	2 cut(s)	756, 1880
BseXI	GCAGC	5 cut(s)	106, 628, 640, 1702, 2088
Bsh1236I	CGCG	1 cut(s)	2122
BshFI	GGCC	2 cut(s)	467, 833
BshVI	ATCGAT	1 cut(s)	1961
BsiHKAI	GWGCWC	5 cut(s)	766, 862, 1248, 1630, 1956
BsiSI	CCGG	2 cut(s)	898, 2003
BslFI	GGGAC	3 cut(s)	497, 836, 1040
BslI	CCNNNNNNNGG	4 cut(s)	23, 391, 913, 2111
BsmAI	GTCTC	5 cut(s)	675, 699, 965, 1322, 1862
BsmBI	CGTCTC	1 cut(s)	1862
BsmFI	GGGAC	3 cut(s)	497, 836, 1040
BsmI	GAATGC	2 cut(s)	573, 1554
BsnI	GGCC	2 cut(s)	467, 833
Bso31I	GGTCTC	1 cut(s)	965
Bsp1286I	GDGCHC	5 cut(s)	766, 862, 1248, 1630, 1956
Bsp1407I	TGTACA	1 cut(s)	1915
BspACI	CCGC	6 cut(s)	22, 464, 481, 1138, 2120, 2122
BspANI	GGCC	2 cut(s)	467, 833
BspCNI	CTCAG	3 cut(s)	417, 427, 2008
BspDI	ATCGAT	1 cut(s)	1961
BspFNI	CGCG	1 cut(s)	2122
BspLI	GGNNCC	1 cut(s)	1284
BspMAI	CTGCAG	2 cut(s)	124, 646
BspOI	GCTAGC	1 cut(s)	1478
BspPI	GGATC	3 cut(s)	1277, 1290, 1723
BspQI	GCTCTTC	1 cut(s)	1458
BspTI	CTTAAG	1 cut(s)	1768
BspTNI	GGTCTC	1 cut(s)	965
BsrDI	GCAATG	1 cut(s)	224
BsrGI	TGTACA	1 cut(s)	1915
BsrI	ACTGG	6 cut(s)	119, 529, 763, 803, 961, 1734
BssECI	CCNNGG	5 cut(s)	17, 273, 1295, 2003, 2120
BssNI	GRCGYC	1 cut(s)	1423
BssSI	CACGAG	1 cut(s)	1976
BssT1I	CCWWGG	3 cut(s)	17, 273, 1295
Bst2BI	CACGAG	1 cut(s)	1976
Bst2UI	CCWGG	1 cut(s)	850
Bst4CI	ACNGT	7 cut(s)	509, 710, 1380, 1621, 1646, 1742, 1913
Bst6I	CTCTTC	3 cut(s)	1320, 1458, 1818
BstACI	GRCGYC	1 cut(s)	1423
BstAFI	CTTAAG	1 cut(s)	1768
BstAPI	GCANNNNNTGC	1 cut(s)	650
BstAUI	TGTACA	1 cut(s)	1915
BstBAI	YACGTR	1 cut(s)	720
BstC8I	GCNNGC	6 cut(s)	858, 948, 1449, 1476, 1659, 2074
BstDEI	CTNAG	5 cut(s)	404, 435, 992, 1185, 2016
BstDSI	CCRYGG	1 cut(s)	2120
BstF5I	GGATG	7 cut(s)	167, 229, 267, 331, 606, 1357, 1999
BstFNI	CGCG	1 cut(s)	2122
BstMAI	GTCTC	5 cut(s)	675, 699, 965, 1322, 1862
BstMWI	GCNNNNNNNGC	6 cut(s)	13, 35, 628, 650, 1573, 2096
BstNI	CCWGG	1 cut(s)	850
BstNSI	RCATGY	2 cut(s)	950, 1922
BstSCI	CCNGG	2 cut(s)	848, 2002
BstSFI	CTRYAG	2 cut(s)	120, 642
BstUI	CGCG	1 cut(s)	2122
BstV1I	GCAGC	5 cut(s)	106, 628, 640, 1702, 2088
BstV2I	GAAGAC	3 cut(s)	1161, 1233, 1445
BstX2I	RGATCY	3 cut(s)	1282, 1489, 1715
BstXI	CCANNNNNNTGG	1 cut(s)	1797
BstYI	RGATCY	3 cut(s)	1282, 1489, 1715
Bsu15I	ATCGAT	1 cut(s)	1961
BsuI	GTATCC	1 cut(s)	1604
BsuRI	GGCC	2 cut(s)	467, 833
BsuTUI	ATCGAT	1 cut(s)	1961
BtgI	CCRYGG	1 cut(s)	2120
BtsCI	GGATG	7 cut(s)	167, 229, 267, 331, 606, 1357, 1999
BtsI	GCAGTG	2 cut(s)	1357, 1442
BtsIMutI	CAGTG	6 cut(s)	715, 1357, 1442, 1626, 1738, 2105
Cac8I	GCNNGC	6 cut(s)	858, 948, 1449, 1476, 1659, 2074
CaiI	CAGNNNCTG	3 cut(s)	68, 128, 1740
Cfr42I	CCGCGG	1 cut(s)	2123
ClaI	ATCGAT	1 cut(s)	1961
CseI	GACGC	1 cut(s)	1412
Csp6I	GTAC	4 cut(s)	248, 1370, 1916, 2117
CviAII	CATG	8 cut(s)	745, 908, 947, 1092, 1241, 1635, 1640, 1919
CviQI	GTAC	4 cut(s)	248, 1370, 1916, 2117
DdeI	CTNAG	5 cut(s)	404, 435, 992, 1185, 2016
EaeI	YGGCCR	1 cut(s)	831
Eam1104I	CTCTTC	3 cut(s)	1320, 1458, 1818
EarI	CTCTTC	3 cut(s)	1320, 1458, 1818
Ecl136II	GAGCTC	3 cut(s)	764, 1246, 1954
Eco130I	CCWWGG	3 cut(s)	17, 273, 1295
Eco24I	GRGCYC	3 cut(s)	766, 1248, 1956
Eco31I	GGTCTC	1 cut(s)	965
Eco32I	GATATC	1 cut(s)	280
Eco53kI	GAGCTC	3 cut(s)	764, 1246, 1954
Eco57I	CTGAAG	2 cut(s)	1211, 1799
EcoICRI	GAGCTC	3 cut(s)	764, 1246, 1954
EcoRII	CCWGG	1 cut(s)	848
EcoRV	GATATC	1 cut(s)	280
EcoT14I	CCWWGG	3 cut(s)	17, 273, 1295
EcoT22I	ATGCAT	2 cut(s)	226, 1435
EcoT38I	GRGCYC	3 cut(s)	766, 1248, 1956
ErhI	CCWWGG	3 cut(s)	17, 273, 1295
Esp3I	CGTCTC	1 cut(s)	1862
FaeI	CATG	8 cut(s)	748, 911, 950, 1095, 1244, 1638, 1643, 1922
FalI	AAGNNNNNCTT	2 cut(s)	1401, 1433
FaqI	GGGAC	3 cut(s)	497, 836, 1040
FatI	CATG	8 cut(s)	744, 907, 946, 1091, 1240, 1634, 1639, 1918
FauI	CCCGC	2 cut(s)	15, 474
FauNDI	CATATG	2 cut(s)	624, 1022
FbaI	TGATCA	2 cut(s)	1354, 1938
Fnu4HI	GCNGC	6 cut(s)	120, 465, 629, 642, 1691, 2077
FokI	GGATG	7 cut(s)	154, 216, 254, 338, 593, 1364, 1986
FriOI	GRGCYC	3 cut(s)	766, 1248, 1956
Fsp4HI	GCNGC	6 cut(s)	120, 465, 629, 642, 1691, 2077
FspBI	CTAG	3 cut(s)	548, 1475, 1569
GluI	GCNGC	6 cut(s)	120, 465, 629, 642, 1691, 2077
GsuI	CTGGAG	3 cut(s)	753, 780, 1604
HaeIII	GGCC	2 cut(s)	467, 833
HapII	CCGG	2 cut(s)	898, 2003
HgaI	GACGC	1 cut(s)	1412
Hin1I	GRCGYC	1 cut(s)	1423
Hin1II	CATG	8 cut(s)	748, 911, 950, 1095, 1244, 1638, 1643, 1922
HincII	GTYRAC	1 cut(s)	112
HindII	GTYRAC	1 cut(s)	112
HinfI	GANTC	8 cut(s)	125, 191, 292, 400, 439, 1088, 2029, 2036
HpaII	CCGG	2 cut(s)	898, 2003
HphI	GGTGA	1 cut(s)	2031
Hpy166II	GTNNAC	3 cut(s)	112, 1550, 1916
Hpy8I	GTNNAC	3 cut(s)	112, 1550, 1916
HpyAV	CCTTC	7 cut(s)	292, 385, 478, 990, 1515, 1608, 2119
HpyCH4III	ACNGT	7 cut(s)	509, 710, 1380, 1621, 1646, 1742, 1913
HpyCH4IV	ACGT	3 cut(s)	719, 1561, 1652
HpyF10VI	GCNNNNNNNGC	6 cut(s)	13, 35, 628, 650, 1573, 2096
HpyF3I	CTNAG	5 cut(s)	404, 435, 992, 1185, 2016
HpySE526I	ACGT	3 cut(s)	719, 1561, 1652
Hsp92I	GRCGYC	1 cut(s)	1423
Hsp92II	CATG	8 cut(s)	748, 911, 950, 1095, 1244, 1638, 1643, 1922
Ksp22I	TGATCA	2 cut(s)	1354, 1938
KspI	CCGCGG	1 cut(s)	2123
LguI	GCTCTTC	1 cut(s)	1458
LmnI	GCTCC	5 cut(s)	413, 761, 769, 1633, 1792
Lsp1109I	GCAGC	5 cut(s)	106, 628, 640, 1702, 2088
LweI	GCATC	2 cut(s)	238, 1515
MaeI	CTAG	3 cut(s)	548, 1475, 1569
MaeII	ACGT	3 cut(s)	719, 1561, 1652
MaeIII	GTNAC	2 cut(s)	1736, 1921
MfeI	CAATTG	2 cut(s)	363, 817
MflI	RGATCY	3 cut(s)	1282, 1489, 1715
MhlI	GDGCHC	5 cut(s)	766, 862, 1248, 1630, 1956
MlsI	TGGCCA	1 cut(s)	833
MluNI	TGGCCA	1 cut(s)	833
MlyI	GAGTC	1 cut(s)	134
MmeI	TCCRAC	3 cut(s)	61, 615, 946
Mox20I	TGGCCA	1 cut(s)	833
Mph1103I	ATGCAT	2 cut(s)	226, 1435
MroXI	GAANNNNTTC	1 cut(s)	428
MscI	TGGCCA	1 cut(s)	833
MseI	TTAA	7 cut(s)	159, 1077, 1149, 1341, 1541, 1769, 2149
MslI	CAYNNNNRTG	2 cut(s)	582, 1795
Msp20I	TGGCCA	1 cut(s)	833
MspA1I	CMGCKG	2 cut(s)	631, 2122
MspCI	CTTAAG	1 cut(s)	1768
MspI	CCGG	2 cut(s)	898, 2003
MspR9I	CCNGG	2 cut(s)	850, 2004
MunI	CAATTG	2 cut(s)	363, 817
Mva1269I	GAATGC	2 cut(s)	573, 1554
MvaI	CCWGG	1 cut(s)	850
MvnI	CGCG	1 cut(s)	2122
MwoI	GCNNNNNNNGC	6 cut(s)	13, 35, 628, 650, 1573, 2096
NciI	CCSGG	1 cut(s)	2004
NdeI	CATATG	2 cut(s)	624, 1022
NheI	GCTAGC	1 cut(s)	1474
NlaIII	CATG	8 cut(s)	748, 911, 950, 1095, 1244, 1638, 1643, 1922
NlaIV	GGNNCC	1 cut(s)	1284
NmuCI	GTSAC	2 cut(s)	1736, 1921
NsiI	ATGCAT	2 cut(s)	226, 1435
NspI	RCATGY	2 cut(s)	950, 1922
OliI	CACNNNNGTG	1 cut(s)	582
PaeI	GCATGC	1 cut(s)	950
PciI	ACATGT	1 cut(s)	1918
PciSI	GCTCTTC	1 cut(s)	1458
PcsI	WCGNNNNNNNCGW	2 cut(s)	1042, 1558
PctI	GAATGC	2 cut(s)	573, 1554
PdmI	GAANNNNTTC	1 cut(s)	428
PfeI	GAWTC	7 cut(s)	191, 292, 400, 439, 1088, 2029, 2036
PflMI	CCANNNNNTGG	1 cut(s)	913
PkrI	GCNGC	6 cut(s)	121, 466, 630, 643, 1692, 2078
PleI	GAGTC	1 cut(s)	133
PpsI	GAGTC	1 cut(s)	133
Ppu21I	YACGTR	1 cut(s)	720
PscI	ACATGT	1 cut(s)	1918
PshBI	ATTAAT	2 cut(s)	159, 1541
Psp124BI	GAGCTC	3 cut(s)	766, 1248, 1956
Psp1406I	AACGTT	1 cut(s)	1652
Psp6I	CCWGG	1 cut(s)	848
PspGI	CCWGG	1 cut(s)	848
PspN4I	GGNNCC	1 cut(s)	1284
PstI	CTGCAG	2 cut(s)	124, 646
PstNI	CAGNNNCTG	3 cut(s)	68, 128, 1740
PsuI	RGATCY	3 cut(s)	1282, 1489, 1715
PvuII	CAGCTG	1 cut(s)	631
RsaI	GTAC	4 cut(s)	249, 1371, 1917, 2118
RsaNI	GTAC	4 cut(s)	248, 1370, 1916, 2117
RseI	CAYNNNNRTG	2 cut(s)	582, 1795
SacI	GAGCTC	3 cut(s)	766, 1248, 1956
SacII	CCGCGG	1 cut(s)	2123
SapI	GCTCTTC	1 cut(s)	1458
SaqAI	TTAA	7 cut(s)	159, 1077, 1149, 1341, 1541, 1769, 2149
SatI	GCNGC	6 cut(s)	120, 465, 629, 642, 1691, 2077
SchI	GAGTC	1 cut(s)	134
ScrFI	CCNGG	2 cut(s)	850, 2004
SduI	GDGCHC	5 cut(s)	766, 862, 1248, 1630, 1956
SfaNI	GCATC	2 cut(s)	238, 1515
SfcI	CTRYAG	2 cut(s)	120, 642
Sfr303I	CCGCGG	1 cut(s)	2123
SgrBI	CCGCGG	1 cut(s)	2123
SmiMI	CAYNNNNRTG	2 cut(s)	582, 1795
SmlI	CTYRAG	3 cut(s)	241, 1768, 2091
SmoI	CTYRAG	3 cut(s)	241, 1768, 2091
SphI	GCATGC	1 cut(s)	950
SsiI	CCGC	6 cut(s)	22, 464, 481, 1138, 2120, 2122
SspI	AATATT	1 cut(s)	378
SspMI	CTAG	3 cut(s)	548, 1475, 1569
SstI	GAGCTC	3 cut(s)	766, 1248, 1956
StyD4I	CCNGG	2 cut(s)	848, 2002
StyI	CCWWGG	3 cut(s)	17, 273, 1295
TaaI	ACNGT	7 cut(s)	509, 710, 1380, 1621, 1646, 1742, 1913
TaiI	ACGT	3 cut(s)	722, 1564, 1655
TaqI	TCGA	4 cut(s)	862, 1323, 1405, 1961
TatI	WGTACW	3 cut(s)	247, 1369, 1915
TauI	GCSGC	1 cut(s)	467
TfiI	GAWTC	7 cut(s)	191, 292, 400, 439, 1088, 2029, 2036
Tru1I	TTAA	7 cut(s)	159, 1077, 1149, 1341, 1541, 1769, 2149
Tru9I	TTAA	7 cut(s)	159, 1077, 1149, 1341, 1541, 1769, 2149
TscAI	CASTG	6 cut(s)	715, 1364, 1449, 1626, 1745, 2112
TseFI	GTSAC	2 cut(s)	1736, 1921
TseI	GCWGC	5 cut(s)	119, 628, 641, 1690, 2076
Tsp45I	GTSAC	2 cut(s)	1736, 1921
TspDTI	ATGAA	9 cut(s)	125, 183, 605, 761, 1080, 1137, 1239, 1692, 1753
TspGWI	ACGGA	2 cut(s)	160, 2127
TspRI	CASTG	6 cut(s)	715, 1364, 1449, 1626, 1745, 2112
Van91I	CCANNNNNTGG	1 cut(s)	913
Vha464I	CTTAAG	1 cut(s)	1768
VspI	ATTAAT	2 cut(s)	159, 1541
XapI	RAATTY	5 cut(s)	425, 588, 971, 1065, 1759
XceI	RCATGY	2 cut(s)	950, 1922
XmnI	GAANNNNTTC	1 cut(s)	428
XspI	CTAG	3 cut(s)	548, 1475, 1569
Zsp2I	ATGCAT	2 cut(s)	226, 1435

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.