AT2G42450

diacylglycerol lipase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
17672102 .. 17675100
2999 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G42450.1

Sequence Viewer

Length: 1641 bp
ATGGCTAACAGAGCATTGAACCGGCTTCTACGGAATTTCTTTGTAGAAAGTTCACCATTCAGGAAGAGAAGTGGATTGTATCAAGGAGTTGTTTACAATGTAATCAAACGGTTTCAGTCTCATTTATCAGAGTCCGGGAAGGTAGAAAAGGAGTTAGAAGAGCAGGAGGCAGAGAAGAGAAGGCCTAGTAGTGTCACTTCTTCGAGGTCCGGATTAGAGAAAAGAAGACAATTTGAATCAGGAATCGACAATGATAGCTCTAGTGATGAAGATACAGGTGATGGAAAGTGGAAACTAGACCTAGCTTGGCTCACTAAAGCACTTGAGCCAGCTATGCAATTACGTAGATGGGCTCTTCCAACAGGAGAGAAGTCACTGCCTGGTAGTCGATCTCTGTCTGAGATAATTGCTAGTATTCAGAGGAGTAGGCTTGGGATTGAAGGTTGGACTTTTGGTGATCTTACTATTGGTCTCTATCTTATATACCTTAGACAAGCATCCTTGTCTCCATTTGAGGACGTCAAGGGCGTAGAAGTTGTTTCAGAGTCTACAGTTTATGATCTGATATATAATGCGGAGTTAGCAAAAGGTTGTTACAGGGATAGTGTGAGTGGTCTTGCAAAGAACACCATGCTTCGAGAGAATAACATTCTTAAATTTGTGAAAGATTCAAGTGTTATGAGGCCTGGATACTACATAGGAGTTGATCATCGAAGGAAACTTGTTGTCTTTGGAATACGCGGGACACATACAATTTACGATCTTATCACTGACATTGTCTCTTCAAGCGATGAAGAAGTCACTTTTGAAGGCTACTCAACACACTTTGGAACTGCTGAAGCTGCACGATGGTTCCTTAACCACGAATTGCAAACTATAAGAAGATGCTTAGCGAAATACGAGGGATACAAGCTACGGCTTGTTGGTCATTCTCTCGGCGGTGCTATAGCCTCCTTAATGGCGATAATGCTCAAGAAAATGCCAAGGGAGGAATTGGGATTCGATGCTGAAATTATTTCAGCCGTTGGGTATGCGACACCTCCTTGTGTTTCCAAAGAGCTTGCAGAGAATTGCTCTGAGTTTGTAACAACTATTGTAATGCAGGACGACATTATACCTAGACTCAGTGCAGCTTCTCTAGCGAGATTGAGGAATGAAATCCTTCAGACAGATTGGACAAGTGTAATTGAGAAGGAAGAATGGAAGAACGTTTTGGATTTGGTAACAAACGCAAAACAAGTTGTCACCTCTGTGCAAGACGTAGCTAGAAAAGTTTCTGATTATGCAAACTTCGGAAACAAAAAAGAAGTTCCAGAAATCCCGTCATCCAAGAACAACCAGTCTGGGATATTAATCTCTGACTCTACTACTAAAGATGTTGTGAAATTGCCAGAAGAGTTATATGTACCGGGTGCAGTTTACTATCTGATGAGGAGCCTAAGAGGAACCCCGAAAAGCTCAGCAGGAAAACAAGTAGAGTACTATAGTCTATGGAAGAGAGATCCAGGACAACATTTTCAGAGGATACTTCTCTCCGGTAATTTCATTACAGACCATAAATGTGATAGCCATTACTACGCTCTGCGAGATGTGCTCAAAGGATTTCCCAGTTTCATCAACGAAAGCATCTTTAAGAAGTGA

Protein Analysis

546

Amino Acids

61.65

Weight (kDa)

8.51

Isoelectric Point (pI)

55.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 243 - 377 4.4e-30 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012096)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 522
AccI GTMKAC 1 cut(s) 548
AccII CGCG 1 cut(s) 741
AccIII TCCGGA 1 cut(s) 209
AciI CCGC 3 cut(s) 575, 741, 939
AclI AACGTT 1 cut(s) 1209
AclWI GGATC 1 cut(s) 1496
AcsI RAATTY 2 cut(s) 34, 656
AcuI CTGAAG 2 cut(s) 858, 1148
AcyI GRCGYC 1 cut(s) 519
AfaI GTAC 2 cut(s) 1407, 1481
AgsI TTSAA 6 cut(s) 19, 236, 440, 672, 786, 809
AjnI CCWGG 3 cut(s) 379, 685, 1504
AjuI GAANNNNNNNTTGG 2 cut(s) 1196, 1228
AleI CACNNNNGTG 1 cut(s) 1250
AluBI AGCT 9 cut(s) 258, 305, 332, 842, 913, 1060, 1133, 1265, 1458
AluI AGCT 9 cut(s) 258, 305, 332, 842, 913, 1060, 1133, 1265, 1458
Alw21I GWGCWC 1 cut(s) 1596
Alw26I GTCTC 4 cut(s) 123, 476, 510, 784
AlwI GGATC 1 cut(s) 1496
Aor13HI TCCGGA 1 cut(s) 209
AoxI GGCC 2 cut(s) 182, 683
ApeKI GCWGC 2 cut(s) 842, 1130
ApoI RAATTY 2 cut(s) 34, 656
AseI ATTAAT 1 cut(s) 1352
Asp700I GAANNNNTTC 2 cut(s) 1161, 1273
AspS9I GGNCC 1 cut(s) 207
AsuC2I CCSGG 2 cut(s) 136, 1410
AsuHPI GGTGA 4 cut(s) 45, 290, 467, 1237
AvaII GGWCC 1 cut(s) 207
BanII GRGCYC 1 cut(s) 355
BarI GAAGNNNNNNTAC 2 cut(s) 181, 213
BbsI GAAGAC 1 cut(s) 232
Bbv12I GWGCWC 1 cut(s) 1596
BbvI GCAGC 2 cut(s) 829, 1142
BccI CCATC 3 cut(s) 275, 342, 843
BceAI ACGGC 2 cut(s) 932, 1007
BciT130I CCWGG 3 cut(s) 381, 687, 1506
BciVI GTATCC 3 cut(s) 683, 899, 1518
BclI TGATCA 1 cut(s) 706
BcnI CCSGG 2 cut(s) 136, 1410
BcoDI GTCTC 4 cut(s) 123, 476, 510, 784
BfaI CTAG 8 cut(s) 186, 261, 296, 302, 411, 1119, 1139, 1266
BfmI CTRYAG 3 cut(s) 549, 945, 1483
BfuI GTATCC 3 cut(s) 683, 899, 1518
BisI GCNGC 2 cut(s) 843, 1131
BlpI GCTNAGC 2 cut(s) 889, 1459
BlsI GCNGC 2 cut(s) 844, 1132
BmcAI AGTACT 1 cut(s) 1481
Bme1390I CCNGG 5 cut(s) 136, 381, 687, 1410, 1506
Bme18I GGWCC 1 cut(s) 207
BmgT120I GGNCC 1 cut(s) 207
BmiI GGNNCC 3 cut(s) 854, 1436, 1447
BmrFI CCNGG 5 cut(s) 136, 381, 687, 1410, 1506
BmrI ACTGGG 1 cut(s) 1602
BmsI GCATC 4 cut(s) 506, 875, 994, 1635
BmuI ACTGGG 1 cut(s) 1602
BpiI GAAGAC 1 cut(s) 232
BplI GAGNNNNNCTC 4 cut(s) 1058, 1090, 1578, 1610
Bpu1102I GCTNAGC 2 cut(s) 889, 1459
BpuEI CTTGAG 2 cut(s) 344, 956
BpuMI CCSGG 2 cut(s) 136, 1410
BsaAI YACGTR 1 cut(s) 344
BsaBI GATNNNNATC 1 cut(s) 1352
BsaHI GRCGYC 1 cut(s) 519
BsaI GGTCTC 1 cut(s) 476
BsaJI CCNNGG 1 cut(s) 983
BsaWI WCCGGW 2 cut(s) 209, 1535
Bse118I RCCGGY 1 cut(s) 21
Bse1I ACTGG 2 cut(s) 1339, 1608
Bse8I GATNNNNATC 1 cut(s) 1352
BseAI TCCGGA 1 cut(s) 209
BseBI CCWGG 3 cut(s) 381, 687, 1506
BseDI CCNNGG 1 cut(s) 983
BseGI GGATG 2 cut(s) 497, 1325
BseJI GATNNNNATC 1 cut(s) 1352
BseMII CTCAG 4 cut(s) 390, 1068, 1138, 1473
BseNI ACTGG 2 cut(s) 1339, 1608
BseRI GAGGAG 2 cut(s) 436, 1447
BseXI GCAGC 2 cut(s) 829, 1142
BsgI GTGCAG 3 cut(s) 828, 1149, 1434
Bsh1236I CGCG 1 cut(s) 741
BshFI GGCC 2 cut(s) 184, 685
BsiHKAI GWGCWC 1 cut(s) 1596
BsiSI CCGG 5 cut(s) 22, 135, 210, 1409, 1536
BslFI GGGAC 1 cut(s) 757
BsmAI GTCTC 4 cut(s) 123, 476, 510, 784
BsmFI GGGAC 1 cut(s) 757
BsnI GGCC 2 cut(s) 184, 685
Bso31I GGTCTC 1 cut(s) 476
Bsp1286I GDGCHC 2 cut(s) 355, 1596
Bsp13I TCCGGA 1 cut(s) 209
Bsp143I GATC 6 cut(s) 389, 457, 559, 706, 760, 1501
Bsp1720I GCTNAGC 2 cut(s) 889, 1459
BspACI CCGC 3 cut(s) 575, 741, 939
BspANI GGCC 2 cut(s) 184, 685
BspCNI CTCAG 4 cut(s) 391, 1069, 1137, 1472
BspEI TCCGGA 1 cut(s) 209
BspFNI CGCG 1 cut(s) 741
BspLI GGNNCC 3 cut(s) 854, 1436, 1447
BspPI GGATC 1 cut(s) 1496
BspQI GCTCTTC 2 cut(s) 153, 360
BspTNI GGTCTC 1 cut(s) 476
BsrFI RCCGGY 1 cut(s) 21
BsrI ACTGG 2 cut(s) 1339, 1608
BssAI RCCGGY 1 cut(s) 21
BssECI CCNNGG 1 cut(s) 983
BssMI GATC 6 cut(s) 389, 457, 559, 706, 760, 1501
BssNI GRCGYC 1 cut(s) 519
BssT1I CCWWGG 1 cut(s) 983
Bst2UI CCWGG 3 cut(s) 381, 687, 1506
Bst4CI ACNGT 2 cut(s) 111, 553
Bst6I CTCTTC 7 cut(s) 59, 153, 170, 360, 787, 1389, 1490
BstACI GRCGYC 1 cut(s) 519
BstBAI YACGTR 1 cut(s) 344
BstC8I GCNNGC 2 cut(s) 330, 1062
BstDEI CTNAG 7 cut(s) 399, 488, 889, 1077, 1124, 1439, 1459
BstF5I GGATG 2 cut(s) 497, 1325
BstFNI CGCG 1 cut(s) 741
BstKTI GATC 6 cut(s) 392, 460, 562, 709, 763, 1504
BstMAI GTCTC 4 cut(s) 123, 476, 510, 784
BstMBI GATC 6 cut(s) 389, 457, 559, 706, 760, 1501
BstMWI GCNNNNNNNGC 6 cut(s) 11, 334, 581, 842, 1139, 1591
BstNI CCWGG 3 cut(s) 381, 687, 1506
BstSCI CCNGG 5 cut(s) 134, 379, 685, 1408, 1504
BstSFI CTRYAG 3 cut(s) 549, 945, 1483
BstSNI TACGTA 1 cut(s) 344
BstUI CGCG 1 cut(s) 741
BstV1I GCAGC 2 cut(s) 829, 1142
BstV2I GAAGAC 1 cut(s) 232
BstX2I RGATCY 1 cut(s) 1501
BstYI RGATCY 1 cut(s) 1501
BsuI GTATCC 3 cut(s) 683, 899, 1518
BsuRI GGCC 2 cut(s) 184, 685
BtgZI GCGATG 1 cut(s) 804
BtsCI GGATG 2 cut(s) 497, 1325
BtsI GCAGTG 1 cut(s) 374
BtsIMutI CAGTG 3 cut(s) 374, 768, 1132
Cac8I GCNNGC 2 cut(s) 330, 1062
Cfr10I RCCGGY 1 cut(s) 21
Cfr13I GGNCC 1 cut(s) 207
Csp6I GTAC 2 cut(s) 1406, 1480
CviAII CATG 1 cut(s) 631
CviQI GTAC 2 cut(s) 1406, 1480
DdeI CTNAG 7 cut(s) 399, 488, 889, 1077, 1124, 1439, 1459
DpnI GATC 6 cut(s) 391, 459, 561, 708, 762, 1503
DpnII GATC 6 cut(s) 389, 457, 559, 706, 760, 1501
Eam1104I CTCTTC 7 cut(s) 59, 153, 170, 360, 787, 1389, 1490
EarI CTCTTC 7 cut(s) 59, 153, 170, 360, 787, 1389, 1490
Eco105I TACGTA 1 cut(s) 344
Eco130I CCWWGG 1 cut(s) 983
Eco147I AGGCCT 2 cut(s) 184, 685
Eco24I GRGCYC 1 cut(s) 355
Eco31I GGTCTC 1 cut(s) 476
Eco47I GGWCC 1 cut(s) 207
Eco57I CTGAAG 2 cut(s) 858, 1148
EcoRII CCWGG 3 cut(s) 379, 685, 1504
EcoT14I CCWWGG 1 cut(s) 983
EcoT38I GRGCYC 1 cut(s) 355
ErhI CCWWGG 1 cut(s) 983
FaeI CATG 1 cut(s) 634
FaqI GGGAC 1 cut(s) 757
FatI CATG 1 cut(s) 630
FauI CCCGC 1 cut(s) 734
FbaI TGATCA 1 cut(s) 706
FblI GTMKAC 1 cut(s) 548
Fnu4HI GCNGC 2 cut(s) 843, 1131
FokI GGATG 2 cut(s) 484, 1312
FriOI GRGCYC 1 cut(s) 355
Fsp4HI GCNGC 2 cut(s) 843, 1131
FspBI CTAG 8 cut(s) 186, 261, 296, 302, 411, 1119, 1139, 1266
GluI GCNGC 2 cut(s) 843, 1131
HaeIII GGCC 2 cut(s) 184, 685
HapII CCGG 5 cut(s) 22, 135, 210, 1409, 1536
Hin1I GRCGYC 1 cut(s) 519
Hin1II CATG 1 cut(s) 634
HinfI GANTC 8 cut(s) 131, 236, 243, 545, 668, 999, 1122, 1361
HpaII CCGG 5 cut(s) 22, 135, 210, 1409, 1536
HphI GGTGA 4 cut(s) 45, 290, 467, 1237
Hpy166II GTNNAC 4 cut(s) 53, 94, 549, 1420
Hpy188III TCNNGA 6 cut(s) 61, 210, 240, 638, 973, 1313
Hpy8I GTNNAC 4 cut(s) 53, 94, 549, 1420
HpyAV CCTTC 7 cut(s) 133, 174, 434, 708, 803, 1172, 1186
HpyCH4III ACNGT 2 cut(s) 111, 553
HpyCH4IV ACGT 4 cut(s) 343, 519, 1209, 1260
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 334, 581, 842, 1139, 1591
HpyF3I CTNAG 7 cut(s) 399, 488, 889, 1077, 1124, 1439, 1459
HpySE526I ACGT 4 cut(s) 343, 519, 1209, 1260
Hsp92I GRCGYC 1 cut(s) 519
Hsp92II CATG 1 cut(s) 634
Kpn2I TCCGGA 1 cut(s) 209
Ksp22I TGATCA 1 cut(s) 706
Kzo9I GATC 6 cut(s) 389, 457, 559, 706, 760, 1501
LguI GCTCTTC 2 cut(s) 153, 360
LmnI GCTCC 1 cut(s) 1434
Lsp1109I GCAGC 2 cut(s) 829, 1142
LweI GCATC 4 cut(s) 506, 875, 994, 1635
MaeI CTAG 8 cut(s) 186, 261, 296, 302, 411, 1119, 1139, 1266
MaeII ACGT 4 cut(s) 343, 519, 1209, 1260
MaeIII GTNAC 7 cut(s) 193, 372, 593, 799, 1084, 1222, 1243
MalI GATC 6 cut(s) 391, 459, 561, 708, 762, 1503
MboI GATC 6 cut(s) 389, 457, 559, 706, 760, 1501
MflI RGATCY 1 cut(s) 1501
MhlI GDGCHC 2 cut(s) 355, 1596
MlyI GAGTC 4 cut(s) 140, 554, 1116, 1355
MmeI TCCRAC 2 cut(s) 383, 425
MroI TCCGGA 1 cut(s) 209
MroXI GAANNNNTTC 2 cut(s) 1161, 1273
MseI TTAA 5 cut(s) 654, 858, 956, 1352, 1632
MslI CAYNNNNRTG 2 cut(s) 1250, 1560
MspI CCGG 5 cut(s) 22, 135, 210, 1409, 1536
MspR9I CCNGG 5 cut(s) 136, 381, 687, 1410, 1506
MvaI CCWGG 3 cut(s) 381, 687, 1506
MvnI CGCG 1 cut(s) 741
MwoI GCNNNNNNNGC 6 cut(s) 11, 334, 581, 842, 1139, 1591
NciI CCSGG 2 cut(s) 136, 1410
NdeII GATC 6 cut(s) 389, 457, 559, 706, 760, 1501
NlaIII CATG 1 cut(s) 634
NlaIV GGNNCC 3 cut(s) 854, 1436, 1447
NmeAIII GCCGAG 1 cut(s) 915
NmuCI GTSAC 4 cut(s) 193, 372, 799, 1243
OliI CACNNNNGTG 1 cut(s) 1250
PceI AGGCCT 2 cut(s) 184, 685
PciSI GCTCTTC 2 cut(s) 153, 360
PcsI WCGNNNNNNNCGW 1 cut(s) 525
PdmI GAANNNNTTC 2 cut(s) 1161, 1273
PfeI GAWTC 4 cut(s) 236, 243, 668, 999
PflFI GACNNNGTC 1 cut(s) 776
PfoI TCCNGGA 2 cut(s) 134, 1504
PkrI GCNGC 2 cut(s) 844, 1132
PleI GAGTC 4 cut(s) 139, 553, 1116, 1355
PpsI GAGTC 4 cut(s) 139, 553, 1116, 1355
Ppu21I YACGTR 1 cut(s) 344
PshBI ATTAAT 1 cut(s) 1352
Psp1406I AACGTT 1 cut(s) 1209
Psp6I CCWGG 3 cut(s) 379, 685, 1504
PspGI CCWGG 3 cut(s) 379, 685, 1504
PspN4I GGNNCC 3 cut(s) 854, 1436, 1447
PspPI GGNCC 1 cut(s) 207
PsuI RGATCY 1 cut(s) 1501
PsyI GACNNNGTC 1 cut(s) 776
RsaI GTAC 2 cut(s) 1407, 1481
RsaNI GTAC 2 cut(s) 1406, 1480
RseI CAYNNNNRTG 2 cut(s) 1250, 1560
SapI GCTCTTC 2 cut(s) 153, 360
SaqAI TTAA 5 cut(s) 654, 858, 956, 1352, 1632
SatI GCNGC 2 cut(s) 843, 1131
Sau3AI GATC 6 cut(s) 389, 457, 559, 706, 760, 1501
Sau96I GGNCC 1 cut(s) 207
ScaI AGTACT 1 cut(s) 1481
SchI GAGTC 4 cut(s) 140, 554, 1116, 1355
ScrFI CCNGG 5 cut(s) 136, 381, 687, 1410, 1506
SduI GDGCHC 2 cut(s) 355, 1596
SfaNI GCATC 4 cut(s) 506, 875, 994, 1635
SfcI CTRYAG 3 cut(s) 549, 945, 1483
SinI GGWCC 1 cut(s) 207
SmiMI CAYNNNNRTG 2 cut(s) 1250, 1560
SmlI CTYRAG 2 cut(s) 323, 971
SmoI CTYRAG 2 cut(s) 323, 971
SnaBI TACGTA 1 cut(s) 344
SseBI AGGCCT 2 cut(s) 184, 685
SsiI CCGC 3 cut(s) 575, 741, 939
SspMI CTAG 8 cut(s) 186, 261, 296, 302, 411, 1119, 1139, 1266
StuI AGGCCT 2 cut(s) 184, 685
StyD4I CCNGG 5 cut(s) 134, 379, 685, 1408, 1504
StyI CCWWGG 1 cut(s) 983
TaaI ACNGT 2 cut(s) 111, 553
TaiI ACGT 4 cut(s) 346, 522, 1212, 1263
TaqI TCGA 6 cut(s) 203, 246, 388, 637, 712, 1002
TatI WGTACW 1 cut(s) 1479
TfiI GAWTC 4 cut(s) 236, 243, 668, 999
Tru1I TTAA 5 cut(s) 654, 858, 956, 1352, 1632
Tru9I TTAA 5 cut(s) 654, 858, 956, 1352, 1632
TscAI CASTG 3 cut(s) 381, 775, 1132
TseFI GTSAC 4 cut(s) 193, 372, 799, 1243
TseI GCWGC 2 cut(s) 842, 1130
Tsp45I GTSAC 4 cut(s) 193, 372, 799, 1243
TspDTI ATGAA 5 cut(s) 282, 807, 1170, 1534, 1603
TspGWI ACGGA 1 cut(s) 46
TspRI CASTG 3 cut(s) 381, 775, 1132
Tth111I GACNNNGTC 1 cut(s) 776
VpaK11BI GGWCC 1 cut(s) 207
VspI ATTAAT 1 cut(s) 1352
XapI RAATTY 2 cut(s) 34, 656
XmiI GTMKAC 1 cut(s) 548
XmnI GAANNNNTTC 2 cut(s) 1161, 1273
XspI CTAG 8 cut(s) 186, 261, 296, 302, 411, 1119, 1139, 1266
ZraI GACGTC 1 cut(s) 520
ZrmI AGTACT 1 cut(s) 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.