Prupe.8G227200_v2.0.a1

Lipase (class 3)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
20367946 .. 20372806
4861 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G227200.1

Sequence Viewer

Length: 1680 bp
ATGGAAATGGCTAAGAATTACTCGAAGAATCTGTTCAACCATTTGTATTTTATGCAAAGATTTCTGAAGAAAGAGCAATTGTATCAGAGGTTTATATATAACTATGTGGATCGGTTTCAATCGCTACGCTCGAAAGTAGGCAAGGTAGAGCCAGAGGCACTCAAAGAAACGAAAACTGCTGCTCCTCCTCAAGCTCCTCTGAGGCCCAAACATGATGCCATTAGCAACTACTCTAGTGACGACGATGATTTAATCGACAGTAAGTGGAAAGGGTTGGAGCTTGCTTGGCTCCCCAGAGCTCTCGAACCAGCTCTTCAACTGTGCAGGTGGGCTCTGCCAAGCTCAACAGGAAATGGAGTGAGAGAGAAACCCCCACCCAGCACTCGATCAGTCTCGGAGATCATTGCAAGCATCCAACGCAGCAAGACAGGAATTCAGGATTGGAGTTTGAGTGATCTCACCATTGGTTTGTTTCTTATTTATCTTCGACAAGCGTCTGTAAATCCATTTGAGGATGTTAATGGTGTTCAGGTCTCCTCAGATTCAATGGTACGAGATCTCATCTACCACTCTGAGTTAGCAAAGGGTTCTTATAAGGATACTACTGCAGCTCTTGCAAGGAACACCATGCTTCGAGAAAGCAATGTCTTGAAATTTGTCAAAAATTCCAGTGTGATGAGGCCTGGATATTATATAGGGATTGACCCTCGTAAAAAACTTGTGATTTTAGGAATCCGTGGTACTCATACTGTATATGACCTTATAACTGATGTTGTTTCTTCAAGCGATGGTGAAGTCACATTTGAGGGTTATTCAACCCACTTTGGCACTGCAGAAGCTGCTCGCTGGTTTCTTAGTCACGAGATGGGAAATATAAGGAAGTGCTTGGAGAAATATGAGGGATTTAAGTTTAGGCTGGTGGGTCATTCGCTTGGAGGTGCTACAGCTGCTCTACTAGCAATAATGCTCCGTAAAAAGTCAGCTAAGGAGCTGGGGTTCAACCCAGAGATTGTCTCTGCGGTGGGGTATGCAACGCCACCTTGTGTCTCCAAAGAACTTGCTGAAAGCTGCTCCAGTTATGTCACAACTGTTGTGATGCAGGATGATATTATACCTAGGCTAAGTGTGGCATCTCTAACGAGGTTGAGGAGTGAAATTCTTCAAACCGATTGGATGAGTGTGGTTGAGAAGGAAGACTGGAGAAGTGTCATAGATTTGGTTACAAATGCAAAGCAGGTTGTGTCTTCGGTGCAAGATGTTGCTCGGAAACTCTCTGATTATGCAAAATTTGGGAGCAGTAAAAATGCTTCAGATGGTCCAGTCATAAAGAAAATGCCTATGGCTTCCAGGGTCCCTGTAAATGACAGAGAAGTAAGAGATAATGCTGTTGCTATTGAGAATGGAGCTGCCTGTAAAGTGCCTGAGGAGTTATTTGTACCCGGCACTGTTTACTACCTAAAGAGGAATGTGGATGCTCAAACAGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGGGAGTATTTTACACTATGGAAGAGGCATCCAGGTGAACATTTTCAGAGGATTGTGCTCTCAAGCAACATAATAACAGACCACAGGTGTGTTAGCCATTACTATGCATTAAGAGATGTGCTCAAAGGTTTGCCCACCTCTGATGATGAAGGCAAACTTCATAATTGA

Protein Analysis

560

Amino Acids

62.55

Weight (kDa)

8.97

Isoelectric Point (pI)

44.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012096)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 594, 764
AarI CACCTGC 1 cut(s) 315
Acc36I ACCTGC 2 cut(s) 315, 1225
AciI CCGC 3 cut(s) 1019, 1485, 1488
AclWI GGATC 1 cut(s) 117
AcsI RAATTY 5 cut(s) 432, 653, 664, 1155, 1286
AcuI CTGAAG 2 cut(s) 86, 1293
AdeI CACNNNGTG 1 cut(s) 1043
AfaI GTAC 3 cut(s) 552, 742, 1437
AgsI TTSAA 9 cut(s) 37, 119, 317, 546, 652, 783, 816, 1000, 1163
AjnI CCWGG 3 cut(s) 682, 1346, 1543
AjuI GAANNNNNNNTTGG 2 cut(s) 424, 456
AleI CACNNNNGTG 1 cut(s) 1599
AloI GAACNNNNNNTCC 2 cut(s) 980, 1012
Alw21I GWGCWC 3 cut(s) 301, 1572, 1635
Alw26I GTCTC 4 cut(s) 397, 538, 1018, 1051
AlwI GGATC 1 cut(s) 117
AlwNI CAGNNNCTG 1 cut(s) 839
AoxI GGCC 2 cut(s) 203, 680
ApoI RAATTY 5 cut(s) 432, 653, 664, 1155, 1286
Asp700I GAANNNNTTC 3 cut(s) 32, 1158, 1554
AspA2I CCTAGG 1 cut(s) 1115
AspS9I GGNCC 3 cut(s) 204, 1316, 1351
AsuC2I CCSGG 1 cut(s) 1440
AsuHPI GGTGA 3 cut(s) 451, 803, 1559
AvaII GGWCC 2 cut(s) 1316, 1351
AvrII CCTAGG 1 cut(s) 1115
AxyI CCTNAGG 1 cut(s) 1422
BanII GRGCYC 2 cut(s) 301, 334
BarI GAAGNNNNNNTAC 2 cut(s) 1291, 1323
BauI CACGAG 1 cut(s) 860
BbsI GAAGAC 2 cut(s) 1200, 1236
Bbv12I GWGCWC 3 cut(s) 301, 1572, 1635
BccI CCATC 3 cut(s) 782, 859, 1307
BciT130I CCWGG 3 cut(s) 684, 1348, 1545
BciVI GTATCC 1 cut(s) 592
BcnI CCSGG 1 cut(s) 1440
BcoDI GTCTC 4 cut(s) 397, 538, 1018, 1051
BfaI CTAG 3 cut(s) 234, 956, 1116
BfmI CTRYAG 3 cut(s) 606, 831, 942
BfuAI ACCTGC 2 cut(s) 315, 1225
BfuI GTATCC 1 cut(s) 592
BglII AGATCT 1 cut(s) 556
BlnI CCTAGG 1 cut(s) 1115
Bme1390I CCNGG 4 cut(s) 684, 1348, 1440, 1545
Bme18I GGWCC 2 cut(s) 1316, 1351
BmgT120I GGNCC 3 cut(s) 204, 1316, 1351
BmiI GGNNCC 3 cut(s) 290, 1352, 1353
BmrFI CCNGG 4 cut(s) 684, 1348, 1440, 1545
BmsI GCATC 6 cut(s) 205, 420, 1086, 1139, 1462, 1549
BoxI GACNNNNGTC 1 cut(s) 493
BpiI GAAGAC 2 cut(s) 1200, 1236
BplI GAGNNNNNCTC 4 cut(s) 998, 1030, 1617, 1649
BpmI CTGGAG 2 cut(s) 1057, 1219
Bpu10I CCTNAGC 1 cut(s) 984
BpuEI CTTGAG 2 cut(s) 174, 1558
BpuMI CCSGG 1 cut(s) 1440
BsaI GGTCTC 1 cut(s) 538
BsaJI CCNNGG 3 cut(s) 736, 1115, 1347
BsaXI ACNNNNNCTCC 6 cut(s) 166, 196, 436, 466, 980, 1010
Bse1I ACTGG 4 cut(s) 669, 1074, 1202, 1319
Bse21I CCTNAGG 1 cut(s) 1422
Bse3DI GCAATG 2 cut(s) 402, 649
BseBI CCWGG 3 cut(s) 684, 1348, 1545
BseDI CCNNGG 3 cut(s) 736, 1115, 1347
BseGI GGATG 6 cut(s) 411, 520, 1108, 1179, 1477, 1540
BseMI GCAATG 2 cut(s) 402, 649
BseMII CTCAG 4 cut(s) 191, 552, 564, 1413
BseNI ACTGG 4 cut(s) 669, 1074, 1202, 1319
BseRI GAGGAG 6 cut(s) 174, 177, 186, 526, 1162, 1439
BseYI CCCAGC 2 cut(s) 377, 991
BsgI GTGCAG 1 cut(s) 343
BshFI GGCC 2 cut(s) 205, 682
BsiHKAI GWGCWC 3 cut(s) 301, 1572, 1635
BsiSI CCGG 1 cut(s) 1440
BslFI GGGAC 1 cut(s) 1337
BsmAI GTCTC 4 cut(s) 397, 538, 1018, 1051
BsmFI GGGAC 1 cut(s) 1337
BsnI GGCC 2 cut(s) 205, 682
Bso31I GGTCTC 1 cut(s) 538
Bsp1286I GDGCHC 4 cut(s) 301, 334, 1572, 1635
Bsp143I GATC 5 cut(s) 109, 386, 399, 454, 556
BspACI CCGC 3 cut(s) 1019, 1485, 1488
BspANI GGCC 2 cut(s) 205, 682
BspCNI CTCAG 4 cut(s) 192, 551, 565, 1414
BspLI GGNNCC 3 cut(s) 290, 1352, 1353
BspMAI CTGCAG 2 cut(s) 610, 835
BspMI ACCTGC 2 cut(s) 315, 1225
BspPI GGATC 1 cut(s) 117
BspQI GCTCTTC 1 cut(s) 318
BspTNI GGTCTC 1 cut(s) 538
BsrDI GCAATG 2 cut(s) 402, 649
BsrI ACTGG 4 cut(s) 669, 1074, 1202, 1319
BssECI CCNNGG 3 cut(s) 736, 1115, 1347
BssMI GATC 5 cut(s) 109, 386, 399, 454, 556
BssSI CACGAG 1 cut(s) 860
BssT1I CCWWGG 1 cut(s) 1115
Bst2BI CACGAG 1 cut(s) 860
Bst2UI CCWGG 3 cut(s) 684, 1348, 1545
Bst4CI ACNGT 5 cut(s) 260, 321, 751, 1090, 1447
Bst6I CTCTTC 2 cut(s) 318, 1529
BstAPI GCANNNNNTGC 2 cut(s) 614, 839
BstC8I GCNNGC 3 cut(s) 282, 409, 844
BstDEI CTNAG 8 cut(s) 12, 200, 538, 573, 854, 984, 1121, 1422
BstDSI CCRYGG 1 cut(s) 736
BstF5I GGATG 6 cut(s) 411, 520, 1108, 1179, 1477, 1540
BstKTI GATC 5 cut(s) 112, 389, 402, 457, 559
BstMAI GTCTC 4 cut(s) 397, 538, 1018, 1051
BstMBI GATC 5 cut(s) 109, 386, 399, 454, 556
BstNI CCWGG 3 cut(s) 684, 1348, 1545
BstPAI GACNNNNGTC 1 cut(s) 493
BstSCI CCNGG 4 cut(s) 682, 1346, 1438, 1543
BstSFI CTRYAG 3 cut(s) 606, 831, 942
BstV2I GAAGAC 2 cut(s) 1200, 1236
BstX2I RGATCY 1 cut(s) 556
BstYI RGATCY 1 cut(s) 556
Bsu36I CCTNAGG 1 cut(s) 1422
BsuI GTATCC 1 cut(s) 592
BsuRI GGCC 2 cut(s) 205, 682
BtgI CCRYGG 1 cut(s) 736
BtgZI GCGATG 1 cut(s) 801
BtsCI GGATG 6 cut(s) 411, 520, 1108, 1179, 1477, 1540
BtsI GCAGTG 1 cut(s) 828
BtsIMutI CAGTG 3 cut(s) 676, 828, 1443
BveI ACCTGC 2 cut(s) 315, 1225
Cac8I GCNNGC 3 cut(s) 282, 409, 844
CaiI CAGNNNCTG 1 cut(s) 839
Cfr13I GGNCC 3 cut(s) 204, 1316, 1351
CseI GACGC 1 cut(s) 483
Csp6I GTAC 3 cut(s) 551, 741, 1436
CviAII CATG 2 cut(s) 212, 628
CviQI GTAC 3 cut(s) 551, 741, 1436
DdeI CTNAG 8 cut(s) 12, 200, 538, 573, 854, 984, 1121, 1422
DpnI GATC 5 cut(s) 111, 388, 401, 456, 558
DpnII GATC 5 cut(s) 109, 386, 399, 454, 556
DraIII CACNNNGTG 1 cut(s) 1043
Eam1104I CTCTTC 2 cut(s) 318, 1529
EarI CTCTTC 2 cut(s) 318, 1529
Ecl136II GAGCTC 1 cut(s) 299
Eco130I CCWWGG 1 cut(s) 1115
Eco147I AGGCCT 1 cut(s) 682
Eco24I GRGCYC 2 cut(s) 301, 334
Eco31I GGTCTC 1 cut(s) 538
Eco47I GGWCC 2 cut(s) 1316, 1351
Eco53kI GAGCTC 1 cut(s) 299
Eco57I CTGAAG 2 cut(s) 86, 1293
Eco81I CCTNAGG 1 cut(s) 1422
EcoICRI GAGCTC 1 cut(s) 299
EcoO109I RGGNCCY 1 cut(s) 1351
EcoRI GAATTC 1 cut(s) 432
EcoRII CCWGG 3 cut(s) 682, 1346, 1543
EcoT14I CCWWGG 1 cut(s) 1115
EcoT22I ATGCAT 1 cut(s) 1621
EcoT38I GRGCYC 2 cut(s) 301, 334
ErhI CCWWGG 1 cut(s) 1115
FaeI CATG 2 cut(s) 215, 631
FalI AAGNNNNNCTT 1 cut(s) 1653
FaqI GGGAC 1 cut(s) 1337
FatI CATG 2 cut(s) 211, 627
FokI GGATG 6 cut(s) 398, 527, 1115, 1186, 1484, 1527
FriOI GRGCYC 2 cut(s) 301, 334
FspBI CTAG 3 cut(s) 234, 956, 1116
GsaI CCCAGC 2 cut(s) 381, 995
GsuI CTGGAG 2 cut(s) 1057, 1219
HaeIII GGCC 2 cut(s) 205, 682
HapII CCGG 1 cut(s) 1440
HgaI GACGC 1 cut(s) 483
Hin1II CATG 2 cut(s) 215, 631
HinfI GANTC 3 cut(s) 28, 542, 732
HpaII CCGG 1 cut(s) 1440
HphI GGTGA 3 cut(s) 451, 803, 1559
Hpy166II GTNNAC 2 cut(s) 1450, 1550
Hpy188III TCNNGA 5 cut(s) 302, 437, 635, 649, 860
Hpy8I GTNNAC 2 cut(s) 1450, 1550
Hpy99I CGWCG 1 cut(s) 245
HpyAV CCTTC 2 cut(s) 1183, 1655
HpyCH4III ACNGT 5 cut(s) 260, 321, 751, 1090, 1447
HpyF3I CTNAG 8 cut(s) 12, 200, 538, 573, 854, 984, 1121, 1422
Hsp92II CATG 2 cut(s) 215, 631
KflI GGGWCCC 1 cut(s) 1351
Kzo9I GATC 5 cut(s) 109, 386, 399, 454, 556
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 9 cut(s) 187, 199, 277, 294, 972, 988, 1076, 1293, 1403
LweI GCATC 6 cut(s) 205, 420, 1086, 1139, 1462, 1549
MaeI CTAG 3 cut(s) 234, 956, 1116
MaeIII GTNAC 5 cut(s) 236, 796, 857, 1081, 1219
MalI GATC 5 cut(s) 111, 388, 401, 456, 558
MboI GATC 5 cut(s) 109, 386, 399, 454, 556
MboII GAAGA 9 cut(s) 37, 79, 305, 476, 771, 1151, 1205, 1236, 1546
MfeI CAATTG 1 cut(s) 77
MflI RGATCY 1 cut(s) 556
MhlI GDGCHC 4 cut(s) 301, 334, 1572, 1635
MluCI AATT 8 cut(s) 16, 77, 432, 653, 664, 1155, 1286, 1675
MmeI TCCRAC 2 cut(s) 255, 439
Mph1103I ATGCAT 1 cut(s) 1621
MroXI GAANNNNTTC 3 cut(s) 32, 1158, 1554
MseI TTAA 4 cut(s) 251, 519, 906, 1622
MslI CAYNNNNRTG 3 cut(s) 1545, 1599, 1614
MspA1I CMGCKG 1 cut(s) 947
MspI CCGG 1 cut(s) 1440
MspR9I CCNGG 4 cut(s) 684, 1348, 1440, 1545
MunI CAATTG 1 cut(s) 77
MvaI CCWGG 3 cut(s) 684, 1348, 1545
NciI CCSGG 1 cut(s) 1440
NdeII GATC 5 cut(s) 109, 386, 399, 454, 556
NlaIII CATG 2 cut(s) 215, 631
NlaIV GGNNCC 3 cut(s) 290, 1352, 1353
NmuCI GTSAC 4 cut(s) 236, 796, 857, 1081
NsiI ATGCAT 1 cut(s) 1621
OliI CACNNNNGTG 1 cut(s) 1599
PaqCI CACCTGC 1 cut(s) 315
PceI AGGCCT 1 cut(s) 682
PciSI GCTCTTC 1 cut(s) 318
PcsI WCGNNNNNNNCGW 1 cut(s) 128
PdmI GAANNNNTTC 3 cut(s) 32, 1158, 1554
PfeI GAWTC 3 cut(s) 28, 542, 732
PpuMI RGGWCCY 1 cut(s) 1351
PshAI GACNNNNGTC 1 cut(s) 493
PsiI TTATAA 2 cut(s) 594, 764
Psp124BI GAGCTC 1 cut(s) 301
Psp5II RGGWCCY 1 cut(s) 1351
Psp6I CCWGG 3 cut(s) 682, 1346, 1543
PspFI CCCAGC 2 cut(s) 377, 991
PspGI CCWGG 3 cut(s) 682, 1346, 1543
PspN4I GGNNCC 3 cut(s) 290, 1352, 1353
PspPI GGNCC 3 cut(s) 204, 1316, 1351
PspPPI RGGWCCY 1 cut(s) 1351
PstI CTGCAG 2 cut(s) 610, 835
PstNI CAGNNNCTG 1 cut(s) 839
PsuI RGATCY 1 cut(s) 556
PvuII CAGCTG 1 cut(s) 947
RsaI GTAC 3 cut(s) 552, 742, 1437
RsaNI GTAC 3 cut(s) 551, 741, 1436
RseI CAYNNNNRTG 3 cut(s) 1545, 1599, 1614
SacI GAGCTC 1 cut(s) 301
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 4 cut(s) 251, 519, 906, 1622
Sau3AI GATC 5 cut(s) 109, 386, 399, 454, 556
Sau96I GGNCC 3 cut(s) 204, 1316, 1351
ScrFI CCNGG 4 cut(s) 684, 1348, 1440, 1545
SduI GDGCHC 4 cut(s) 301, 334, 1572, 1635
SfaNI GCATC 6 cut(s) 205, 420, 1086, 1139, 1462, 1549
SfcI CTRYAG 3 cut(s) 606, 831, 942
SinI GGWCC 2 cut(s) 1316, 1351
SmiMI CAYNNNNRTG 3 cut(s) 1545, 1599, 1614
SmlI CTYRAG 2 cut(s) 189, 1573
SmoI CTYRAG 2 cut(s) 189, 1573
Sse9I AATT 8 cut(s) 16, 77, 432, 653, 664, 1155, 1286, 1675
SseBI AGGCCT 1 cut(s) 682
SsiI CCGC 3 cut(s) 1019, 1485, 1488
SspMI CTAG 3 cut(s) 234, 956, 1116
SstI GAGCTC 1 cut(s) 301
StuI AGGCCT 1 cut(s) 682
StyD4I CCNGG 4 cut(s) 682, 1346, 1438, 1543
StyI CCWWGG 1 cut(s) 1115
TaaI ACNGT 5 cut(s) 260, 321, 751, 1090, 1447
TaqI TCGA 7 cut(s) 23, 131, 255, 303, 385, 487, 634
TasI AATT 8 cut(s) 16, 77, 432, 653, 664, 1155, 1286, 1675
TauI GCSGC 2 cut(s) 1488, 1491
TfiI GAWTC 3 cut(s) 28, 542, 732
Tru1I TTAA 4 cut(s) 251, 519, 906, 1622
Tru9I TTAA 4 cut(s) 251, 519, 906, 1622
TscAI CASTG 3 cut(s) 676, 835, 1450
TseFI GTSAC 4 cut(s) 236, 796, 857, 1081
Tsp45I GTSAC 4 cut(s) 236, 796, 857, 1081
TspDTI ATGAA 2 cut(s) 1661, 1674
TspGWI ACGGA 2 cut(s) 725, 959
TspRI CASTG 3 cut(s) 676, 835, 1450
VpaK11BI GGWCC 2 cut(s) 1316, 1351
XapI RAATTY 5 cut(s) 432, 653, 664, 1155, 1286
XmaJI CCTAGG 1 cut(s) 1115
XmnI GAANNNNTTC 3 cut(s) 32, 1158, 1554
XspI CTAG 3 cut(s) 234, 956, 1116
Zsp2I ATGCAT 1 cut(s) 1621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.