Auxin-Regulated Gene Involved in Organ
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44080 AT3G59900 |
| malus_domestica | MD02G1000700.v1.1 MD14G1087100.v1.1 MD15G1142100.v1.1 |
| prunus_persica | Prupe.2G039300_v2.0.a1 Prupe.7G039300_v2.0.a1 Prupe.7G039400_v2.0.a1 Prupe.7G271100_v2.0.a1 |
| pyrus_communis | pycom290g00090 |
| rosa_chinensis | RchiOBHm_Chr1g0324951 RchiOBHm_Chr1g0325751 RchiOBHm_Chr2g0084361 |
| rosa_laevigata | RLG00000030108 |
| rosa_roxburghii | Rroxscaffold_2G00156160 |
| rosa_rugosa | Rorug01G0054300 Rorug01G0453000 Rorug01G0453000 |
| rosa_samantha | Rh2AG001200 Rh2BG001000 Rh2CG001100 Rh2DG001300 |
| rosa_wichuraiana | Rw2G000090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 169 |
| AccI | GTMKAC | 1 cut(s) | 22 |
| AcuI | CTGAAG | 1 cut(s) | 196 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 140 |
| AflIII | ACRYGT | 1 cut(s) | 379 |
| AgsI | TTSAA | 1 cut(s) | 47 |
| AjiI | CACGTC | 1 cut(s) | 79 |
| AluBI | AGCT | 2 cut(s) | 125, 131 |
| AluI | AGCT | 2 cut(s) | 125, 131 |
| Alw26I | GTCTC | 1 cut(s) | 248 |
| ApeKI | GCWGC | 1 cut(s) | 307 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 156 |
| BauI | CACGAG | 1 cut(s) | 106 |
| BbvI | GCAGC | 1 cut(s) | 294 |
| BcoDI | GTCTC | 1 cut(s) | 248 |
| BisI | GCNGC | 1 cut(s) | 308 |
| BlsI | GCNGC | 1 cut(s) | 309 |
| BmgBI | CACGTC | 1 cut(s) | 79 |
| BmsI | GCATC | 1 cut(s) | 260 |
| BpmI | CTGGAG | 1 cut(s) | 111 |
| BsaI | GGTCTC | 1 cut(s) | 248 |
| BsaJI | CCNNGG | 1 cut(s) | 185 |
| BsaWI | WCCGGW | 1 cut(s) | 96 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 140 |
| Bse1I | ACTGG | 1 cut(s) | 18 |
| Bse3DI | GCAATG | 1 cut(s) | 284 |
| BseDI | CCNNGG | 1 cut(s) | 185 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BseMI | GCAATG | 1 cut(s) | 284 |
| BseNI | ACTGG | 1 cut(s) | 18 |
| BseRI | GAGGAG | 3 cut(s) | 99, 282, 285 |
| BseXI | GCAGC | 1 cut(s) | 294 |
| BsiSI | CCGG | 1 cut(s) | 97 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BsmAI | GTCTC | 1 cut(s) | 248 |
| Bso31I | GGTCTC | 1 cut(s) | 248 |
| Bsp143I | GATC | 2 cut(s) | 88, 261 |
| BspTNI | GGTCTC | 1 cut(s) | 248 |
| BsrDI | GCAATG | 1 cut(s) | 284 |
| BsrI | ACTGG | 1 cut(s) | 18 |
| BssECI | CCNNGG | 1 cut(s) | 185 |
| BssMI | GATC | 2 cut(s) | 88, 261 |
| BssSI | CACGAG | 1 cut(s) | 106 |
| BssT1I | CCWWGG | 1 cut(s) | 185 |
| Bst2BI | CACGAG | 1 cut(s) | 106 |
| Bst4CI | ACNGT | 2 cut(s) | 182, 270 |
| BstKTI | GATC | 2 cut(s) | 91, 264 |
| BstMAI | GTCTC | 1 cut(s) | 248 |
| BstMBI | GATC | 2 cut(s) | 88, 261 |
| BstNSI | RCATGY | 1 cut(s) | 383 |
| BstV1I | GCAGC | 1 cut(s) | 294 |
| BtrI | CACGTC | 1 cut(s) | 79 |
| CviAII | CATG | 3 cut(s) | 73, 358, 380 |
| CviJI | RGCY | 3 cut(s) | 125, 131, 193 |
| CviKI_1 | RGCY | 3 cut(s) | 125, 131, 193 |
| DpnI | GATC | 2 cut(s) | 90, 263 |
| DpnII | GATC | 2 cut(s) | 88, 261 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 169 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 169 |
| Eco130I | CCWWGG | 1 cut(s) | 185 |
| Eco31I | GGTCTC | 1 cut(s) | 248 |
| Eco57I | CTGAAG | 1 cut(s) | 196 |
| EcoT14I | CCWWGG | 1 cut(s) | 185 |
| ErhI | CCWWGG | 1 cut(s) | 185 |
| FaeI | CATG | 3 cut(s) | 76, 361, 383 |
| FatI | CATG | 3 cut(s) | 72, 357, 379 |
| FblI | GTMKAC | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 1 cut(s) | 308 |
| Fsp4HI | GCNGC | 1 cut(s) | 308 |
| GluI | GCNGC | 1 cut(s) | 308 |
| GsuI | CTGGAG | 1 cut(s) | 111 |
| HapII | CCGG | 1 cut(s) | 97 |
| Hin1II | CATG | 3 cut(s) | 76, 361, 383 |
| HinfI | GANTC | 4 cut(s) | 4, 221, 274, 316 |
| HpaII | CCGG | 1 cut(s) | 97 |
| Hpy166II | GTNNAC | 1 cut(s) | 23 |
| Hpy188I | TCNGA | 2 cut(s) | 135, 162 |
| Hpy188III | TCNNGA | 3 cut(s) | 8, 47, 259 |
| Hpy8I | GTNNAC | 1 cut(s) | 23 |
| Hpy99I | CGWCG | 1 cut(s) | 175 |
| HpyAV | CCTTC | 1 cut(s) | 372 |
| HpyCH4III | ACNGT | 2 cut(s) | 182, 270 |
| HpyCH4IV | ACGT | 1 cut(s) | 78 |
| HpySE526I | ACGT | 1 cut(s) | 78 |
| Hsp92II | CATG | 3 cut(s) | 76, 361, 383 |
| Kzo9I | GATC | 2 cut(s) | 88, 261 |
| LmnI | GCTCC | 2 cut(s) | 130, 136 |
| LpnPI | CCDG | 3 cut(s) | 31, 110, 141 |
| Lsp1109I | GCAGC | 1 cut(s) | 294 |
| LweI | GCATC | 1 cut(s) | 260 |
| MaeII | ACGT | 1 cut(s) | 78 |
| MaeIII | GTNAC | 1 cut(s) | 206 |
| MalI | GATC | 2 cut(s) | 90, 263 |
| MboI | GATC | 2 cut(s) | 88, 261 |
| MboII | GAAGA | 5 cut(s) | 269, 357, 378, 381, 384 |
| MluCI | AATT | 2 cut(s) | 152, 370 |
| MnlI | CCTC | 5 cut(s) | 77, 183, 300, 303, 306 |
| MroXI | GAANNNNTTC | 1 cut(s) | 156 |
| MslI | CAYNNNNRTG | 2 cut(s) | 77, 401 |
| MspI | CCGG | 1 cut(s) | 97 |
| NdeII | GATC | 2 cut(s) | 88, 261 |
| NlaIII | CATG | 3 cut(s) | 76, 361, 383 |
| NspI | RCATGY | 1 cut(s) | 383 |
| PciI | ACATGT | 1 cut(s) | 379 |
| PdmI | GAANNNNTTC | 1 cut(s) | 156 |
| PfeI | GAWTC | 4 cut(s) | 4, 221, 274, 316 |
| PflFI | GACNNNGTC | 1 cut(s) | 166 |
| PkrI | GCNGC | 1 cut(s) | 309 |
| PscI | ACATGT | 1 cut(s) | 379 |
| PsyI | GACNNNGTC | 1 cut(s) | 166 |
| RseI | CAYNNNNRTG | 2 cut(s) | 77, 401 |
| SatI | GCNGC | 1 cut(s) | 308 |
| Sau3AI | GATC | 2 cut(s) | 88, 261 |
| SetI | ASST | 3 cut(s) | 81, 127, 133 |
| SfaNI | GCATC | 1 cut(s) | 260 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 77, 401 |
| Sse9I | AATT | 2 cut(s) | 152, 370 |
| StyI | CCWWGG | 1 cut(s) | 185 |
| TaaI | ACNGT | 2 cut(s) | 182, 270 |
| TaiI | ACGT | 1 cut(s) | 81 |
| TasI | AATT | 2 cut(s) | 152, 370 |
| TfiI | GAWTC | 4 cut(s) | 4, 221, 274, 316 |
| TseI | GCWGC | 1 cut(s) | 307 |
| TspDTI | ATGAA | 1 cut(s) | 346 |
| Tth111I | GACNNNGTC | 1 cut(s) | 166 |
| XceI | RCATGY | 1 cut(s) | 383 |
| XmiI | GTMKAC | 1 cut(s) | 22 |
| XmnI | GAANNNNTTC | 1 cut(s) | 156 |