Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008367

Physical Location & Seq

Genomic Coordinates Forward (+)

22213381 .. 22215343

Gene Structure 1963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G271100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 348 bp

ATGGATGTTAAAACAAGAAAGGTTTCTGGTACCCCAGTGGATGAAGGGCATAAACTAGAGTATCATCATCATCATCAGAGACACATCAAGACAACGGAATATCGTCGAACACTATCACACGGTAGAGGGAGTGGCAGAAGACTGCTGCCGGCAAGCTACTTCAGCCTGGAGTCATTGCTTTTGCTTATATGTCTCACGGCGACTCTGTTGATCCTTCCTTTGATACTTCCACCGCTGCCTCCCCCACCCTTCATGCTGCTGTTGCTTCCGATTGGCATTCTAGCAGTGCTTATGATCTTGGCTTTCATGCCTTCTAATGTGAGGGACTTGACTTATACATACGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0008150 GO:0008284 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009741 GO:0009825 GO:0009987 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0016049 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035265 GO:0040007 GO:0040008 GO:0042127 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045927 GO:0046620 GO:0046622 GO:0048518 GO:0048522 GO:0048589 GO:0048638 GO:0048639 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071369 GO:0071495 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

116

Amino Acids

13.05

Weight (kDa)

9.72

Isoelectric Point (pI)

56.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44080 AT3G59900
malus_domestica	MD02G1000700.v1.1 MD14G1087100.v1.1 MD15G1142100.v1.1
prunus_persica	Prupe.2G039300_v2.0.a1 Prupe.7G039300_v2.0.a1 Prupe.7G039400_v2.0.a1 Prupe.7G271100_v2.0.a1
pyrus_communis	pycom290g00090
rosa_chinensis	RchiOBHm_Chr1g0324951 RchiOBHm_Chr1g0325751 RchiOBHm_Chr2g0084361
rosa_laevigata	RLG00000030108
rosa_roxburghii	Rroxscaffold_2G00156160
rosa_rugosa	Rorug01G0054300 Rorug01G0453000 Rorug01G0453000
rosa_samantha	Rh2AG001200 Rh2BG001000 Rh2CG001100 Rh2DG001300
rosa_wichuraiana	Rw2G000090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	29
AccB1I	GGYRCC	1 cut(s)	29
AciI	CCGC	1 cut(s)	233
AclWI	GGATC	1 cut(s)	205
AcuI	CTGAAG	1 cut(s)	145
AfaI	GTAC	1 cut(s)	31
AjnI	CCWGG	1 cut(s)	165
AluBI	AGCT	1 cut(s)	156
AluI	AGCT	1 cut(s)	156
Alw26I	GTCTC	2 cut(s)	73, 197
AlwI	GGATC	1 cut(s)	205
ApeKI	GCWGC	3 cut(s)	145, 235, 256
Asp700I	GAANNNNTTC	1 cut(s)	22
Asp718I	GGTACC	1 cut(s)	29
BaeI	ACNNNNGTAYC	4 cut(s)	21, 44, 54, 77
BanI	GGYRCC	1 cut(s)	29
BbsI	GAAGAC	1 cut(s)	145
BbvI	GCAGC	3 cut(s)	132, 222, 243
BceAI	ACGGC	1 cut(s)	213
BciT130I	CCWGG	1 cut(s)	167
BcoDI	GTCTC	2 cut(s)	73, 197
BfaI	CTAG	2 cut(s)	56, 281
BisI	GCNGC	3 cut(s)	146, 236, 257
BlsI	GCNGC	3 cut(s)	147, 237, 258
Bme1390I	CCNGG	1 cut(s)	167
BmiI	GGNNCC	1 cut(s)	31
BmrFI	CCNGG	1 cut(s)	167
BmrI	ACTGGG	1 cut(s)	29
BmuI	ACTGGG	1 cut(s)	29
BpiI	GAAGAC	1 cut(s)	145
BpmI	CTGGAG	1 cut(s)	188
Bse118I	RCCGGY	1 cut(s)	148
Bse1I	ACTGG	1 cut(s)	35
Bse3DI	GCAATG	1 cut(s)	173
BseBI	CCWGG	1 cut(s)	167
BseGI	GGATG	2 cut(s)	10, 46
BseMI	GCAATG	1 cut(s)	173
BseNI	ACTGG	1 cut(s)	35
BseXI	GCAGC	3 cut(s)	132, 222, 243
BshNI	GGYRCC	1 cut(s)	29
BsiSI	CCGG	1 cut(s)	149
BslFI	GGGAC	1 cut(s)	338
BsmAI	GTCTC	2 cut(s)	73, 197
BsmFI	GGGAC	1 cut(s)	338
BsmI	GAATGC	1 cut(s)	276
Bsp143I	GATC	2 cut(s)	210, 294
BspACI	CCGC	1 cut(s)	233
BspLI	GGNNCC	1 cut(s)	31
BspPI	GGATC	1 cut(s)	205
BspT107I	GGYRCC	1 cut(s)	29
BsrDI	GCAATG	1 cut(s)	173
BsrFI	RCCGGY	1 cut(s)	148
BsrI	ACTGG	1 cut(s)	35
BssAI	RCCGGY	1 cut(s)	148
BssMI	GATC	2 cut(s)	210, 294
Bst2UI	CCWGG	1 cut(s)	167
Bst4CI	ACNGT	1 cut(s)	122
BstC8I	GCNNGC	2 cut(s)	150, 154
BstF5I	GGATG	2 cut(s)	10, 46
BstKTI	GATC	2 cut(s)	213, 297
BstMAI	GTCTC	2 cut(s)	73, 197
BstMBI	GATC	2 cut(s)	210, 294
BstMWI	GCNNNNNNNGC	2 cut(s)	162, 262
BstNI	CCWGG	1 cut(s)	167
BstSCI	CCNGG	1 cut(s)	165
BstV1I	GCAGC	3 cut(s)	132, 222, 243
BstV2I	GAAGAC	1 cut(s)	145
BtsCI	GGATG	2 cut(s)	10, 46
BtsI	GCAGTG	1 cut(s)	291
BtsIMutI	CAGTG	2 cut(s)	42, 291
Cac8I	GCNNGC	2 cut(s)	150, 154
Cfr10I	RCCGGY	1 cut(s)	148
Csp6I	GTAC	1 cut(s)	30
CviAII	CATG	2 cut(s)	253, 307
CviJI	RGCY	3 cut(s)	156, 165, 302
CviKI_1	RGCY	3 cut(s)	156, 165, 302
CviQI	GTAC	1 cut(s)	30
DpnI	GATC	2 cut(s)	212, 296
DpnII	GATC	2 cut(s)	210, 294
Eco57I	CTGAAG	1 cut(s)	145
EcoRII	CCWGG	1 cut(s)	165
FaeI	CATG	2 cut(s)	256, 310
FaiI	YATR	8 cut(s)	51, 188, 190, 254, 293, 308, 336, 340
FaqI	GGGAC	1 cut(s)	338
FatI	CATG	2 cut(s)	252, 306
Fnu4HI	GCNGC	3 cut(s)	146, 236, 257
FokI	GGATG	2 cut(s)	17, 53
Fsp4HI	GCNGC	3 cut(s)	146, 236, 257
FspBI	CTAG	2 cut(s)	56, 281
GluI	GCNGC	3 cut(s)	146, 236, 257
GsuI	CTGGAG	1 cut(s)	188
HapII	CCGG	1 cut(s)	149
Hin1II	CATG	2 cut(s)	256, 310
HinfI	GANTC	2 cut(s)	170, 202
HpaII	CCGG	1 cut(s)	149
Hpy188I	TCNGA	2 cut(s)	78, 270
Hpy188III	TCNNGA	1 cut(s)	88
Hpy99I	CGWCG	1 cut(s)	108
HpyAV	CCTTC	4 cut(s)	38, 224, 259, 321
HpyCH4III	ACNGT	1 cut(s)	122
HpyCH4IV	ACGT	1 cut(s)	342
HpyF10VI	GCNNNNNNNGC	2 cut(s)	162, 262
HpySE526I	ACGT	1 cut(s)	342
Hsp92II	CATG	2 cut(s)	256, 310
KpnI	GGTACC	1 cut(s)	33
KroI	GCCGGC	1 cut(s)	148
KroNI	GCCGGC	1 cut(s)	150
Kzo9I	GATC	2 cut(s)	210, 294
LpnPI	CCDG	5 cut(s)	12, 48, 152, 162, 179
Lsp1109I	GCAGC	3 cut(s)	132, 222, 243
MaeI	CTAG	2 cut(s)	56, 281
MaeII	ACGT	1 cut(s)	342
MalI	GATC	2 cut(s)	212, 296
MboI	GATC	2 cut(s)	210, 294
MboII	GAAGA	1 cut(s)	150
MlyI	GAGTC	2 cut(s)	179, 196
MnlI	CCTC	3 cut(s)	119, 249, 315
MroNI	GCCGGC	1 cut(s)	148
MroXI	GAANNNNTTC	1 cut(s)	22
MseI	TTAA	1 cut(s)	9
MspA1I	CMGCKG	1 cut(s)	235
MspI	CCGG	1 cut(s)	149
MspR9I	CCNGG	1 cut(s)	167
Mva1269I	GAATGC	1 cut(s)	276
MvaI	CCWGG	1 cut(s)	167
MwoI	GCNNNNNNNGC	2 cut(s)	162, 262
NaeI	GCCGGC	1 cut(s)	150
NdeII	GATC	2 cut(s)	210, 294
NgoMIV	GCCGGC	1 cut(s)	148
NlaIII	CATG	2 cut(s)	256, 310
NlaIV	GGNNCC	1 cut(s)	31
PctI	GAATGC	1 cut(s)	276
PdiI	GCCGGC	1 cut(s)	150
PdmI	GAANNNNTTC	1 cut(s)	22
PkrI	GCNGC	3 cut(s)	147, 237, 258
PleI	GAGTC	2 cut(s)	178, 196
PpsI	GAGTC	2 cut(s)	178, 196
Psp6I	CCWGG	1 cut(s)	165
PspGI	CCWGG	1 cut(s)	165
PspN4I	GGNNCC	1 cut(s)	31
RsaI	GTAC	1 cut(s)	31
RsaNI	GTAC	1 cut(s)	30
SaqAI	TTAA	1 cut(s)	9
SatI	GCNGC	3 cut(s)	146, 236, 257
Sau3AI	GATC	2 cut(s)	210, 294
SchI	GAGTC	2 cut(s)	179, 196
ScrFI	CCNGG	1 cut(s)	167
SetI	ASST	3 cut(s)	24, 158, 345
SsiI	CCGC	1 cut(s)	233
SspMI	CTAG	2 cut(s)	56, 281
StyD4I	CCNGG	1 cut(s)	165
TaaI	ACNGT	1 cut(s)	122
TaiI	ACGT	1 cut(s)	345
TaqI	TCGA	1 cut(s)	106
Tru1I	TTAA	1 cut(s)	9
Tru9I	TTAA	1 cut(s)	9
TscAI	CASTG	2 cut(s)	42, 291
TseI	GCWGC	3 cut(s)	145, 235, 256
TspDTI	ATGAA	3 cut(s)	57, 241, 295
TspGWI	ACGGA	1 cut(s)	110
TspRI	CASTG	2 cut(s)	42, 291
XmnI	GAANNNNTTC	1 cut(s)	22
XspI	CTAG	2 cut(s)	56, 281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.