Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010253

Physical Location & Seq

Genomic Coordinates Forward (+)

18792864 .. 18795904

Gene Structure 3041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G45620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGGCGGACGGTGGGGCTGAACCTCCAGCTCCACCATCATCGATAAACGCCGGTGAATTTCTCTTGTCTATTTTGCACGGAAGTCCTTCGCCGTCGTCACAAGGTCCTCAGCATCATCAGTCATTCGCTCTCGATCCAGCCATCGCAGCCATTGGTCCTACCGTCAATAATCCTTTTCCTCCGTCGAATTGGCAATCTAACGGTCATCGACCCAGTAATCATAACCCTCCTTCTTGGCCACTCGCCTTTTCACCTCCTCATAATCTTTCCCCCAATTTCTTAGGGTTTCCTCAATTTCCGCCTAGCCCTTTCACGACGAACCAATTCGACGGTAATCAAAGAGTATCTCCAGAAGATGCTTATAGATTAGGGTTTCCTGGAACTACAAATCCTGCTATTCAGTCCATGGTACAGCAACAGCAGCAGCAGCAGCTACCGCCGCCGCAATCAGAGACTCGGAAGCTTGTTTTTGGTTCTTTCTCGGGAGATGCTACTCAAAGCCTTAATGGGTTACATAACGGGAACTTGAAGTATGATTCTAATCAACACGAACAGCTCATGAGGCATCCCCAATCTACTCTCTCGAATTCTAACATGGATCCAAACTTGTCTCATCATCGGAATCATGATCTCCATGAACAGAGGGGAGGTCACAGCGGAAGAGGAAACTGGGGTCATATTGGGAATAACGGCAGGGGTTTAAAGTCTACTCCTCCTCCTCCTCCTCCTGGATTTTCGAGTAACCAAAGAGGATGGGATATGAGTTTAGGAAGTAAGGATGACGATAGAGGGATGGGTAGGAATCATGATCAAGCAATGGGCGAGCATTCTAAAGTTTGGAATCAAAGTGTTGATTTTTCTGCTGAGGCTAATAGATTAAGGGGATTGTCTATCCAGAACGAGAGCAAGTTCAATCTTAGTCAACAAATAGATCATCCTGGACCACCTAAGGGTGCAAGTCTACATTCTGTATCAGCAGCTGATGCTGCGGATTCCTTTTCGATGTTGAACAAGGAAGCTCGTCGTGGAGGTGAACGTAGAGAGGAATTGGGGCAGCTCAGTAAGGCAAAGAGGGAAGGCAATGCAAACTCTGACGAGATTGAGGATTTTGGAGAAGATATTGTTAAGTCTTTATTGCTTGAAGATGAAACTGGTGAGAAGGATGCCAATGATGGGAAGAAGGATAGCAAGACTTCTCGCGAGAAGGAGTCGAGAGTGGACAATCGGGGTCAACGGCTGCTTGGCCAAAAGGCAAGAATGGTTAAAATGTATATGGCATGTCGAAATGACATCCACAGGTATGATGCTACATTCATTGCAATCTACAAGTCCCTGATTCCCGCAGAAGAGGAGCTGGAGAAGCAGAGACAACTAATGGCACATCTAGAGAATCTAGTTGCCAAAGAATGGCCTCATGCAAAGTTGTATCTTTACGGGTCCTGTGCTAACTCTTTTGGTTTCCCGAAGAGCGACATCGACGTTTGCCTTGCAATCGAAGGTGATGATATCAACAAATCTGAGATGTTGTTAAAGCTGGCAGAGATCTTGGAATCAGATAATCTCCAAAATGTTCAGGCTCTAACACGAGCTAGGGTTCCAATTGTAAAACTTATGGATCCGGTTACTGGGATATCTTGTGATATCTGCATCAACAATGTATTGGCTGTTGTGAACACAAAGCTCTTGCGAGATTATGCTCAGATAGATGTTCGTTTAAGGCAGTTGGCTTTCATTGTGAAACATTGGGCAAAGTCAAGAAGGGTTAATGAAACTTATCAAGGAACACTTTCCAGCTACGCGTACGTTCTGATGTGTATCCATTTCTTGCAGCAGCGTAGGCCGCCAATTCTTCCTTGCTTACAGGAAATGGAGCCGACTTACTCAGTTCGGGTAGATAATATCCGGTGCACATACTTTGATAATGTTGATAGACTCCGTAACTTCGGATCAAACAACAGGGAGACCATAGCTGAGCTGGTCTGGGGATTCTTCAACTACTGGGCTTACGCTCATGACTATGCGTATAATGTTGTATCCGTCCGCACCGGTTCCATACTTGGGAAGCGAGAGAAGGACTGGACGAGAAGGGTGGGGAACGATAGGCACTTGATATGCATAGAGGATCCGTTTGAGACGAGCCATGATCTGGGTAGGGTGGTCGACAAGTTTAGTATCAGAGTGTTGAGGGAGGAGTTCGAAAGAGCTGCAAGGATTATGCATCAAGATCCTAACCCATGTGCCAAGCTTTTGGAACCATATATTCCTGAAGATAATAATGGACAAGGCCACAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0005488 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016073 GO:0016074 GO:0016180 GO:0016740 GO:0016772 GO:0016779 GO:0019219 GO:0019222 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031325 GO:0034470 GO:0034641 GO:0034660 GO:0043144 GO:0043170 GO:0043628 GO:0043629 GO:0043631 GO:0044237 GO:0044238 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050265 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060147 GO:0060148 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065007 GO:0070569 GO:0070920 GO:0071050 GO:0071076 GO:0071704 GO:0080090 GO:0090065 GO:0090304 GO:0097159 GO:0140098 GO:1900368 GO:1900370 GO:1901360 GO:1901363 GO:1903705

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTP_transf_2 PAP_assoc

Protein Analysis

764

Amino Acids

85.76

Weight (kDa)

6.43

Isoelectric Point (pI)

52.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MTPAP-like_central	PF22600	439 - 567	1.6e-32	Poly(A) RNA polymerase, mitochondrial-like, central palm domain
TUTase	PF19088	439 - 548	1e-11	TUTase nucleotidyltransferase domain
PAP_assoc	PF03828	656 - 714	2.5e-18	Cid1 family poly A polymerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010253)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45620
fragaria_vesca	FvH4_7g12540 FvH4_7g12540 FvH4_7g12540 FvH4_7g12540 FvH4_7g12540
malus_domestica	MD02G1198200.v1.1
prunus_persica	Prupe.2G149800_v2.0.a1 Prupe.2G149800_v2.0.a1
pyrus_communis	pycom02g16180
rosa_chinensis	RchiOBHm_Chr1g0351451
rosa_laevigata	RLG00000028407
rosa_multiflora	Rmu_ssc0000403.1_g000022
rosa_roxburghii	Rroxscaffold_4G00303810
rosa_rugosa	Rorug01G0218100 Rorug01G0218200
rosa_samantha	Rh1AG232700 Rh1BG203700 Rh1CG217400 Rh1DG230600
rosa_wichuraiana	Rw1G020260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1407, 2146
AccI	GTMKAC	3 cut(s)	707, 961, 2160
AccII	CGCG	2 cut(s)	1200, 1799
AclWI	GGATC	9 cut(s)	128, 593, 606, 1610, 1623, 1954, 2117, 2130, 2219
AcoI	YGGCCR	2 cut(s)	236, 1243
AcsI	RAATTY	2 cut(s)	56, 586
AcuI	CTGAAG	1 cut(s)	2286
AfaI	GTAC	2 cut(s)	411, 1802
AfiI	CCNNNNNNNGG	7 cut(s)	728, 950, 1173, 1407, 1625, 2058, 2146
AflIII	ACRYGT	1 cut(s)	1797
AgeI	ACCGGT	1 cut(s)	2045
AgsI	TTSAA	5 cut(s)	529, 913, 1009, 1142, 1993
AjnI	CCWGG	3 cut(s)	376, 727, 937
AloI	GAACNNNNNNTCC	2 cut(s)	373, 405
Alw21I	GWGCWC	1 cut(s)	1910
Alw26I	GTCTC	5 cut(s)	446, 615, 1360, 1955, 2126
Alw44I	GTGCAC	1 cut(s)	1906
AlwI	GGATC	9 cut(s)	128, 593, 606, 1610, 1623, 1954, 2117, 2130, 2219
AlwNI	CAGNNNCTG	1 cut(s)	980
Ama87I	CYCGRG	1 cut(s)	481
AoxI	GGCC	5 cut(s)	236, 1243, 1409, 1838, 2284
ApaLI	GTGCAC	1 cut(s)	1906
ApoI	RAATTY	2 cut(s)	56, 586
AsiGI	ACCGGT	1 cut(s)	2045
Asp700I	GAANNNNTTC	3 cut(s)	85, 323, 1786
AspS9I	GGNCC	4 cut(s)	104, 155, 941, 1437
AsuHPI	GGTGA	5 cut(s)	65, 243, 1043, 1166, 1511
AsuII	TTCGAA	1 cut(s)	2196
AvaI	CYCGRG	1 cut(s)	481
AvaII	GGWCC	4 cut(s)	104, 155, 941, 1437
AxyI	CCTNAGG	1 cut(s)	948
BaeGI	GKGCMC	1 cut(s)	1910
BalI	TGGCCA	2 cut(s)	238, 1245
BamHI	GGATCC	3 cut(s)	598, 1615, 2122
BauI	CACGAG	1 cut(s)	1584
Bbv12I	GWGCWC	1 cut(s)	1910
BbvCI	CCTCAGC	2 cut(s)	108, 864
BccI	CCATC	5 cut(s)	43, 149, 747, 787, 1166
BceAI	ACGGC	3 cut(s)	76, 706, 1250
BcgI	CGANNNNNNTGC	2 cut(s)	2186, 2220
BciT130I	CCWGG	3 cut(s)	378, 729, 939
BciVI	GTATCC	2 cut(s)	1826, 2044
BclI	TGATCA	1 cut(s)	808
BcoDI	GTCTC	5 cut(s)	446, 615, 1360, 1955, 2126
BfaI	CTAG	4 cut(s)	303, 1385, 1394, 1590
BfuI	GTATCC	2 cut(s)	1826, 2044
BglII	AGATCT	1 cut(s)	1542
BlpI	GCTNAGC	1 cut(s)	1971
Bme1390I	CCNGG	3 cut(s)	378, 729, 939
Bme18I	GGWCC	4 cut(s)	104, 155, 941, 1437
BmeT110I	CYCGRG	1 cut(s)	481
BmgT120I	GGNCC	4 cut(s)	104, 155, 941, 1437
BmiI	GGNNCC	8 cut(s)	600, 1438, 1596, 1617, 1872, 2050, 2124, 2253
BmrFI	CCNGG	3 cut(s)	378, 729, 939
BmrI	ACTGGG	4 cut(s)	207, 679, 1635, 2008
BmsI	GCATC	9 cut(s)	121, 346, 478, 574, 973, 1153, 1294, 1656, 2227
BmuI	ACTGGG	4 cut(s)	207, 679, 1635, 2008
BpmI	CTGGAG	3 cut(s)	9, 333, 1376
Bpu10I	CCTNAGC	2 cut(s)	108, 864
Bpu1102I	GCTNAGC	1 cut(s)	1971
Bpu14I	TTCGAA	1 cut(s)	2196
Bsa29I	ATCGAT	1 cut(s)	41
BsaBI	GATNNNNATC	2 cut(s)	540, 1814
BsaI	GGTCTC	1 cut(s)	1955
BsaJI	CCNNGG	1 cut(s)	405
BsaWI	WCCGGW	3 cut(s)	1618, 1902, 2045
BsaXI	ACNNNNNCTCC	2 cut(s)	700, 730
Bsc4I	CCNNNNNNNGG	7 cut(s)	728, 950, 1173, 1407, 1625, 2058, 2146
Bse118I	RCCGGY	2 cut(s)	50, 2045
Bse1I	ACTGG	6 cut(s)	213, 674, 1156, 1630, 2003, 2081
Bse21I	CCTNAGG	1 cut(s)	948
Bse3DI	GCAATG	3 cut(s)	822, 1087, 1314
Bse8I	GATNNNNATC	2 cut(s)	540, 1814
BseBI	CCWGG	3 cut(s)	378, 729, 939
BseCI	ATCGAT	1 cut(s)	41
BseDI	CCNNGG	1 cut(s)	405
BseGI	GGATG	7 cut(s)	565, 758, 784, 798, 934, 1168, 1290
BseJI	GATNNNNATC	2 cut(s)	540, 1814
BseLI	CCNNNNNNNGG	7 cut(s)	728, 950, 1173, 1407, 1625, 2058, 2146
BseMI	GCAATG	3 cut(s)	822, 1087, 1314
BseMII	CTCAG	7 cut(s)	122, 855, 1072, 1509, 1712, 1896, 1962
BseNI	ACTGG	6 cut(s)	213, 674, 1156, 1630, 2003, 2081
BseRI	GAGGAG	8 cut(s)	246, 702, 705, 708, 711, 714, 1364, 2204
BseSI	GKGCMC	1 cut(s)	1910
Bsh1236I	CGCG	2 cut(s)	1200, 1799
BshFI	GGCC	5 cut(s)	238, 1245, 1411, 1840, 2286
BshTI	ACCGGT	1 cut(s)	2045
BshVI	ATCGAT	1 cut(s)	41
BsiHKAI	GWGCWC	1 cut(s)	1910
BsiHKCI	CYCGRG	1 cut(s)	481
BsiSI	CCGG	4 cut(s)	51, 1619, 1903, 2046
BsiWI	CGTACG	1 cut(s)	1800
BslFI	GGGAC	1 cut(s)	1315
BslI	CCNNNNNNNGG	7 cut(s)	728, 950, 1173, 1407, 1625, 2058, 2146
BsmAI	GTCTC	5 cut(s)	446, 615, 1360, 1955, 2126
BsmBI	CGTCTC	1 cut(s)	2126
BsmFI	GGGAC	1 cut(s)	1315
BsmI	GAATGC	1 cut(s)	826
BsnI	GGCC	5 cut(s)	238, 1245, 1411, 1840, 2286
Bso31I	GGTCTC	1 cut(s)	1955
BsoBI	CYCGRG	1 cut(s)	481
Bsp119I	TTCGAA	1 cut(s)	2196
Bsp1286I	GDGCHC	1 cut(s)	1910
Bsp1720I	GCTNAGC	1 cut(s)	1971
Bsp19I	CCATGG	1 cut(s)	405
Bsp68I	TCGCGA	1 cut(s)	1200
BspANI	GGCC	5 cut(s)	238, 1245, 1411, 1840, 2286
BspCNI	CTCAG	7 cut(s)	121, 856, 1071, 1510, 1711, 1895, 1963
BspDI	ATCGAT	1 cut(s)	41
BspFNI	CGCG	2 cut(s)	1200, 1799
BspHI	TCATGA	4 cut(s)	558, 625, 805, 2011
BspLI	GGNNCC	8 cut(s)	600, 1438, 1596, 1617, 1872, 2050, 2124, 2253
BspPI	GGATC	9 cut(s)	128, 593, 606, 1610, 1623, 1954, 2117, 2130, 2219
BspQI	GCTCTTC	1 cut(s)	1460
BspT104I	TTCGAA	1 cut(s)	2196
BspTNI	GGTCTC	1 cut(s)	1955
BsrDI	GCAATG	3 cut(s)	822, 1087, 1314
BsrFI	RCCGGY	2 cut(s)	50, 2045
BsrI	ACTGG	6 cut(s)	213, 674, 1156, 1630, 2003, 2081
BssAI	RCCGGY	2 cut(s)	50, 2045
BssECI	CCNNGG	1 cut(s)	405
BssSI	CACGAG	1 cut(s)	1584
BssT1I	CCWWGG	1 cut(s)	405
Bst2BI	CACGAG	1 cut(s)	1584
Bst2UI	CCWGG	3 cut(s)	378, 729, 939
Bst4CI	ACNGT	4 cut(s)	11, 163, 203, 332
Bst6I	CTCTTC	3 cut(s)	655, 1341, 1460
BstAPI	GCANNNNNTGC	1 cut(s)	983
BstBI	TTCGAA	1 cut(s)	2196
BstC8I	GCNNGC	2 cut(s)	824, 1536
BstDSI	CCRYGG	1 cut(s)	405
BstF5I	GGATG	7 cut(s)	565, 758, 784, 798, 934, 1168, 1290
BstFNI	CGCG	2 cut(s)	1200, 1799
BstMAI	GTCTC	5 cut(s)	446, 615, 1360, 1955, 2126
BstNI	CCWGG	3 cut(s)	378, 729, 939
BstNSI	RCATGY	1 cut(s)	1281
BstSCI	CCNGG	3 cut(s)	376, 727, 937
BstSLI	GKGCMC	1 cut(s)	1910
BstUI	CGCG	2 cut(s)	1200, 1799
BstX2I	RGATCY	5 cut(s)	598, 1542, 1615, 2122, 2224
BstXI	CCANNNNNNTGG	1 cut(s)	2248
BstYI	RGATCY	5 cut(s)	598, 1542, 1615, 2122, 2224
Bsu15I	ATCGAT	1 cut(s)	41
Bsu36I	CCTNAGG	1 cut(s)	948
BsuI	GTATCC	2 cut(s)	1826, 2044
BsuRI	GGCC	5 cut(s)	238, 1245, 1411, 1840, 2286
BsuTUI	ATCGAT	1 cut(s)	41
BtgI	CCRYGG	1 cut(s)	405
BtgZI	GCGATG	1 cut(s)	127
BtsCI	GGATG	7 cut(s)	565, 758, 784, 798, 934, 1168, 1290
BtuMI	TCGCGA	1 cut(s)	1200
Cac8I	GCNNGC	2 cut(s)	824, 1536
CaiI	CAGNNNCTG	1 cut(s)	980
CciI	TCATGA	4 cut(s)	558, 625, 805, 2011
Cfr10I	RCCGGY	2 cut(s)	50, 2045
Cfr13I	GGNCC	4 cut(s)	104, 155, 941, 1437
ClaI	ATCGAT	1 cut(s)	41
Csp6I	GTAC	2 cut(s)	410, 1801
CspAI	ACCGGT	1 cut(s)	2045
CviQI	GTAC	2 cut(s)	410, 1801
DraI	TTTAAA	1 cut(s)	702
EaeI	YGGCCR	2 cut(s)	236, 1243
Eam1104I	CTCTTC	3 cut(s)	655, 1341, 1460
EarI	CTCTTC	3 cut(s)	655, 1341, 1460
EciI	GGCGGA	2 cut(s)	20, 288
Eco130I	CCWWGG	1 cut(s)	405
Eco31I	GGTCTC	1 cut(s)	1955
Eco32I	GATATC	3 cut(s)	1507, 1632, 1642
Eco47I	GGWCC	4 cut(s)	104, 155, 941, 1437
Eco57I	CTGAAG	1 cut(s)	2286
Eco81I	CCTNAGG	1 cut(s)	948
Eco88I	CYCGRG	1 cut(s)	481
EcoO109I	RGGNCCY	2 cut(s)	104, 1437
EcoRI	GAATTC	1 cut(s)	586
EcoRII	CCWGG	3 cut(s)	376, 727, 937
EcoRV	GATATC	3 cut(s)	1507, 1632, 1642
EcoT14I	CCWWGG	1 cut(s)	405
EcoT22I	ATGCAT	2 cut(s)	2117, 2220
ErhI	CCWWGG	1 cut(s)	405
Esp3I	CGTCTC	1 cut(s)	2126
FalI	AAGNNNNNCTT	2 cut(s)	1770, 1802
FaqI	GGGAC	1 cut(s)	1315
FauI	CCCGC	1 cut(s)	1348
FbaI	TGATCA	1 cut(s)	808
FblI	GTMKAC	3 cut(s)	707, 961, 2160
FokI	GGATG	7 cut(s)	552, 765, 791, 805, 921, 1175, 1277
FspBI	CTAG	4 cut(s)	303, 1385, 1394, 1590
GsuI	CTGGAG	3 cut(s)	9, 333, 1376
HaeIII	GGCC	5 cut(s)	238, 1245, 1411, 1840, 2286
HapII	CCGG	4 cut(s)	51, 1619, 1903, 2046
HincII	GTYRAC	3 cut(s)	923, 1232, 2161
HindII	GTYRAC	3 cut(s)	923, 1232, 2161
HindIII	AAGCTT	2 cut(s)	461, 2243
HpaII	CCGG	4 cut(s)	51, 1619, 1903, 2046
HphI	GGTGA	5 cut(s)	65, 243, 1043, 1166, 1511
Hpy166II	GTNNAC	9 cut(s)	708, 923, 962, 1034, 1219, 1232, 1672, 1908, 2161
Hpy8I	GTNNAC	9 cut(s)	708, 923, 962, 1034, 1219, 1232, 1672, 1908, 2161
Hpy99I	CGWCG	6 cut(s)	97, 187, 319, 332, 1026, 1481
HpyCH4III	ACNGT	4 cut(s)	11, 163, 203, 332
HpyCH4IV	ACGT	3 cut(s)	1036, 1479, 1803
HpySE526I	ACGT	3 cut(s)	1036, 1479, 1803
Ksp22I	TGATCA	1 cut(s)	808
LguI	GCTCTTC	1 cut(s)	1460
LmnI	GCTCC	3 cut(s)	34, 1351, 1870
LweI	GCATC	9 cut(s)	121, 346, 478, 574, 973, 1153, 1294, 1656, 2227
MaeI	CTAG	4 cut(s)	303, 1385, 1394, 1590
MaeII	ACGT	3 cut(s)	1036, 1479, 1803
MaeIII	GTNAC	6 cut(s)	96, 510, 650, 740, 1621, 1937
MfeI	CAATTG	1 cut(s)	1599
MflI	RGATCY	5 cut(s)	598, 1542, 1615, 2122, 2224
MhlI	GDGCHC	1 cut(s)	1910
MlsI	TGGCCA	2 cut(s)	238, 1245
MluCI	AATT	9 cut(s)	56, 187, 274, 293, 323, 586, 1046, 1599, 1845
MluI	ACGCGT	1 cut(s)	1797
MluNI	TGGCCA	2 cut(s)	238, 1245
MlyI	GAGTC	3 cut(s)	448, 1217, 1926
Mox20I	TGGCCA	2 cut(s)	238, 1245
Mph1103I	ATGCAT	2 cut(s)	2117, 2220
MroXI	GAANNNNTTC	3 cut(s)	85, 323, 1786
MscI	TGGCCA	2 cut(s)	238, 1245
MseI	TTAA	8 cut(s)	504, 701, 878, 1125, 1263, 1529, 1715, 1764
MslI	CAYNNNNRTG	2 cut(s)	1299, 2016
Msp20I	TGGCCA	2 cut(s)	238, 1245
MspA1I	CMGCKG	2 cut(s)	657, 980
MspI	CCGG	4 cut(s)	51, 1619, 1903, 2046
MspR9I	CCNGG	3 cut(s)	378, 729, 939
MunI	CAATTG	1 cut(s)	1599
Mva1269I	GAATGC	1 cut(s)	826
MvaI	CCWGG	3 cut(s)	378, 729, 939
MvnI	CGCG	2 cut(s)	1200, 1799
NcoI	CCATGG	1 cut(s)	405
NlaIV	GGNNCC	8 cut(s)	600, 1438, 1596, 1617, 1872, 2050, 2124, 2253
NmuCI	GTSAC	2 cut(s)	96, 650
NruI	TCGCGA	1 cut(s)	1200
NsiI	ATGCAT	2 cut(s)	2117, 2220
NspI	RCATGY	1 cut(s)	1281
NspV	TTCGAA	1 cut(s)	2196
PagI	TCATGA	4 cut(s)	558, 625, 805, 2011
PciSI	GCTCTTC	1 cut(s)	1460
PctI	GAATGC	1 cut(s)	826
PdmI	GAANNNNTTC	3 cut(s)	85, 323, 1786
PfeI	GAWTC	9 cut(s)	536, 622, 802, 841, 992, 1336, 1390, 1550, 1986
Pfl23II	CGTACG	1 cut(s)	1800
PflMI	CCANNNNNTGG	2 cut(s)	1407, 2146
PfoI	TCCNGGA	3 cut(s)	376, 727, 937
PinAI	ACCGGT	1 cut(s)	2045
PleI	GAGTC	3 cut(s)	448, 1216, 1926
PpsI	GAGTC	3 cut(s)	448, 1216, 1926
PpuMI	RGGWCCY	2 cut(s)	104, 1437
Psp5II	RGGWCCY	2 cut(s)	104, 1437
Psp6I	CCWGG	3 cut(s)	376, 727, 937
PspGI	CCWGG	3 cut(s)	376, 727, 937
PspLI	CGTACG	1 cut(s)	1800
PspN4I	GGNNCC	8 cut(s)	600, 1438, 1596, 1617, 1872, 2050, 2124, 2253
PspPI	GGNCC	4 cut(s)	104, 155, 941, 1437
PspPPI	RGGWCCY	2 cut(s)	104, 1437
PstNI	CAGNNNCTG	1 cut(s)	980
PsuI	RGATCY	5 cut(s)	598, 1542, 1615, 2122, 2224
PvuII	CAGCTG	1 cut(s)	980
RruI	TCGCGA	1 cut(s)	1200
RsaI	GTAC	2 cut(s)	411, 1802
RsaNI	GTAC	2 cut(s)	410, 1801
RseI	CAYNNNNRTG	2 cut(s)	1299, 2016
SalI	GTCGAC	1 cut(s)	2159
SapI	GCTCTTC	1 cut(s)	1460
SaqAI	TTAA	8 cut(s)	504, 701, 878, 1125, 1263, 1529, 1715, 1764
Sau96I	GGNCC	4 cut(s)	104, 155, 941, 1437
SchI	GAGTC	3 cut(s)	448, 1217, 1926
ScrFI	CCNGG	3 cut(s)	378, 729, 939
SduI	GDGCHC	1 cut(s)	1910
SfaNI	GCATC	9 cut(s)	121, 346, 478, 574, 973, 1153, 1294, 1656, 2227
SfuI	TTCGAA	1 cut(s)	2196
SgrAI	CRCCGGYG	1 cut(s)	50
SinI	GGWCC	4 cut(s)	104, 155, 941, 1437
SmiMI	CAYNNNNRTG	2 cut(s)	1299, 2016
Sse9I	AATT	9 cut(s)	56, 187, 274, 293, 323, 586, 1046, 1599, 1845
SspMI	CTAG	4 cut(s)	303, 1385, 1394, 1590
StyD4I	CCNGG	3 cut(s)	376, 727, 937
StyI	CCWWGG	1 cut(s)	405
TaaI	ACNGT	4 cut(s)	11, 163, 203, 332
TaiI	ACGT	3 cut(s)	1039, 1482, 1806
TasI	AATT	9 cut(s)	56, 187, 274, 293, 323, 586, 1046, 1599, 1845
TauI	GCSGC	3 cut(s)	442, 445, 1843
TfiI	GAWTC	9 cut(s)	536, 622, 802, 841, 992, 1336, 1390, 1550, 1986
Tru1I	TTAA	8 cut(s)	504, 701, 878, 1125, 1263, 1529, 1715, 1764
Tru9I	TTAA	8 cut(s)	504, 701, 878, 1125, 1263, 1529, 1715, 1764
TseFI	GTSAC	2 cut(s)	96, 650
Tsp45I	GTSAC	2 cut(s)	96, 650
TspDTI	ATGAA	5 cut(s)	651, 1161, 1303, 1720, 1782
TspGWI	ACGGA	5 cut(s)	93, 171, 1925, 2026, 2115
Van91I	CCANNNNNTGG	2 cut(s)	1407, 2146
VneI	GTGCAC	1 cut(s)	1906
VpaK11BI	GGWCC	4 cut(s)	104, 155, 941, 1437
XapI	RAATTY	2 cut(s)	56, 586
XbaI	TCTAGA	1 cut(s)	1384
XceI	RCATGY	1 cut(s)	1281
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1972
XmiI	GTMKAC	3 cut(s)	707, 961, 2160
XmnI	GAANNNNTTC	3 cut(s)	85, 323, 1786
XspI	CTAG	4 cut(s)	303, 1385, 1394, 1590
Zsp2I	ATGCAT	2 cut(s)	2117, 2220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.