Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0010253

Physical Location & Seq

Genomic Coordinates Forward (+)

43862064 .. 43867052

Gene Structure 4989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G020260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGCCCAACCACTTCCCCCAGTTCGGCAGCAGCCAATTCCCTGGAAATCAAATCCTCGCCGACGATTTCAGGAAAATTGGGTTTTCGACCCCTCCTAACAATTCCGTCCAAGACCTTGCTCTGCAGAAACAGCACCAAGAACAGAAGCTCAAGTTTAGATATTTACCTGGCGATATAATCCGAAATCCGGATTCGTCAGTAAATGTCATTACTTCCTCAGAAGTTGCCAAGCTCAGTAATGGCTTGGACCGCAATCTCCACTTGAATTCCAACAATTCATCTGAGTTTCGTCGCGGTAATTTCGATTCAGGGGAGCAAGAATCGAGAGGGGGAGGGGTCGTCGGTGGCGGCATGGGGAAGCAAGTTCGTAGGACAATGCCGCCGCCGGGGTTCGGAAACAAGCCTAGGGGAGGAGGGAATTGGGATTCCGGGAGCAGGAGGGGAGGTATGGAGCACAATGTGGATAGGGAAAGGCAGAGTTCTAGTGAATTTGTGAGGAATAGGGATGCTTCTATTGAGAATGAGAGAGTGAAAAGATTGGGAGGTGAAGATGGTCGAGTTCGAGGAAATGGGGCTAGTAGAACGGGGCTCAATGCACAGCTTGATCGCCCTGGTCCACCCGCTGGCACAAATCTCCATTCTGTTTCTGCTTCGGAGATTGAAGAGTCAATGATGAATTTCGAGGATGGGGAGAGGGCAAGAAAGGATAGTGGCGGCGGTGAAGATGTAAGCCAACACTTGCTTGAGGATGAAACGGATGACAAGAATGAGGCAAAGCAACACCATAAGGATTCGAGATCAGATAACAGAGGACAACACCAACTTAGCCAAAGAGCGAGATCGTACAAAAGACAAACACTATGTCGCTTTGACATAGACAGACTAAATGCTCCTTTTCTTGAAATTTTTGAATCCTTGATACCAACTGAGGAAGAAAAGGCCAAGCAGAAGCAATTATTGACATTATTGGAGAATATAATCTGCAAAGAATGGCCTGAAGCTCGCCTTTATATTTATGGATCATGTGGCAATTCATTTGGAGTTTCTAAAAGTGATATAGATCTCTGTCTGGTGATTGGTGAAGAAGATATTAACAAATCTGAGATCTTACTACGGTTGGCAGATCTTTTGCAGTCAGACAATCTAGAGAATGTACAGGCATTGACGCGTGCTAGGGTCCCCATAGTAAAGCTTATGGATCCTGTCACTGGAATATCTTGTGATATATGCATCAACAATGTTCTGGCTGTGGTAAATACAAAGCTTCTTCGTGATTATGCAAATATAGATGCAAGATTACGACAATTGGCTTTTATTGTGAAACATTGGGCCAAGTCGAGAGGAGTCAATGAAACTTACCATGGAACCCTATCTAGCTATGCGTATGTTTTGATGTGTATACATTTCTTACAACAGCGGAGACCTGCTATTCTTCCCTGTTTACAGGGAATGCGGGCAACATACTCGGTCACTGTAGAGAACATTGAATGTGCTTTCTTTGATCAAGTAGACAAACTTCAAGAATTTGGATCCCATAACAGGGAAACTATTGCTGAACTTGTGTGGGCTTTTTTCAATTACTGGGCATATAGTCATGATTACGCAAATACTGTTATATCCGTTCGTAGAGGAAGCACAATCAGCAAGCGGGAAAAGGACTGGACAAGGAGGATTGGAAATGACCGGCATTTGATATGCATAGAGGATCCGTTTGAGACGTCCCATGACCTGGGACGAGTTGTAGACAAGCACAGCATAAAAGTTTTGAGGGAGGAGTTTGAACGTGCCGCTGAGATAATGCAGTATGATGCAAATCCCTGTGTGAAGCTCTTTGAACCCTATGTGCCTAGTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0005488 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016073 GO:0016074 GO:0016180 GO:0016740 GO:0016772 GO:0016779 GO:0019219 GO:0019222 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031325 GO:0034470 GO:0034641 GO:0034660 GO:0043144 GO:0043170 GO:0043628 GO:0043629 GO:0043631 GO:0044237 GO:0044238 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050265 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060147 GO:0060148 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065007 GO:0070569 GO:0070920 GO:0071050 GO:0071076 GO:0071704 GO:0080090 GO:0090065 GO:0090304 GO:0097159 GO:0140098 GO:1900368 GO:1900370 GO:1901360 GO:1901363 GO:1903705

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTP_transf_2 PAP_assoc

Protein Analysis

618

Amino Acids

69.84

Weight (kDa)

6.41

Isoelectric Point (pI)

54.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MTPAP-like_central	PF22600	299 - 427	6.1e-33	Poly(A) RNA polymerase, mitochondrial-like, central palm domain
TUTase	PF19088	304 - 409	1.2e-09	TUTase nucleotidyltransferase domain
PAP_assoc	PF03828	517 - 575	9.6e-20	Cid1 family poly A polymerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010253)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45620
fragaria_vesca	FvH4_7g12540 FvH4_7g12540 FvH4_7g12540 FvH4_7g12540 FvH4_7g12540
malus_domestica	MD02G1198200.v1.1
prunus_persica	Prupe.2G149800_v2.0.a1 Prupe.2G149800_v2.0.a1
pyrus_communis	pycom02g16180
rosa_chinensis	RchiOBHm_Chr1g0351451
rosa_laevigata	RLG00000028407
rosa_multiflora	Rmu_ssc0000403.1_g000022
rosa_roxburghii	Rroxscaffold_4G00303810
rosa_rugosa	Rorug01G0218100 Rorug01G0218200
rosa_samantha	Rh1AG232700 Rh1BG203700 Rh1CG217400 Rh1DG230600
rosa_wichuraiana	Rw1G020260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1721
Acc36I	ACCTGC	1 cut(s)	1432
AccB7I	CCANNNNNTGG	2 cut(s)	623, 1729
AccI	GTMKAC	3 cut(s)	1399, 1509, 1743
AccII	CGCG	2 cut(s)	294, 1168
AccIII	TCCGGA	1 cut(s)	187
AclWI	GGATC	7 cut(s)	1027, 1193, 1206, 1524, 1537, 1700, 1713
AcsI	RAATTY	5 cut(s)	265, 488, 676, 903, 1523
AcuI	CTGAAG	1 cut(s)	1017
AcyI	GRCGYC	1 cut(s)	1718
AdeI	CACNNNGTG	1 cut(s)	460
AfaI	GTAC	2 cut(s)	845, 1155
AflIII	ACRYGT	1 cut(s)	1166
AgsI	TTSAA	9 cut(s)	265, 662, 902, 911, 1487, 1520, 1576, 1781, 1835
AjnI	CCWGG	4 cut(s)	40, 166, 610, 1728
AluBI	AGCT	8 cut(s)	148, 232, 601, 1001, 1192, 1264, 1377, 1828
AluI	AGCT	8 cut(s)	148, 232, 601, 1001, 1192, 1264, 1377, 1828
Alw21I	GWGCWC	1 cut(s)	456
Alw26I	GTCTC	2 cut(s)	1414, 1709
AlwI	GGATC	7 cut(s)	1027, 1193, 1206, 1524, 1537, 1700, 1713
Aor13HI	TCCGGA	1 cut(s)	187
AoxI	GGCC	3 cut(s)	939, 992, 1329
ApeKI	GCWGC	2 cut(s)	27, 30
ApoI	RAATTY	5 cut(s)	265, 488, 676, 903, 1523
ArsI	GACNNNNNNTTYG	2 cut(s)	847, 879
AspA2I	CCTAGG	1 cut(s)	404
AspS9I	GGNCC	4 cut(s)	247, 614, 1177, 1329
AsuC2I	CCSGG	2 cut(s)	387, 430
AsuHPI	GGTGA	4 cut(s)	557, 731, 1084, 1091
AvaII	GGWCC	3 cut(s)	247, 614, 1177
AvrII	CCTAGG	1 cut(s)	404
BamHI	GGATCC	3 cut(s)	1198, 1529, 1705
BanII	GRGCYC	1 cut(s)	591
BarI	GAAGNNNNNNTAC	2 cut(s)	1500, 1532
Bbv12I	GWGCWC	1 cut(s)	456
BbvI	GCAGC	2 cut(s)	39, 42
BccI	CCATC	2 cut(s)	545, 680
BcgI	CGANNNNNNTGC	2 cut(s)	1446, 1480
BciT130I	CCWGG	4 cut(s)	42, 168, 612, 1730
BclI	TGATCA	1 cut(s)	1501
BcnI	CCSGG	2 cut(s)	387, 430
BcoDI	GTCTC	2 cut(s)	1414, 1709
BfaI	CTAG	7 cut(s)	405, 483, 576, 1145, 1173, 1374, 1848
BfmI	CTRYAG	2 cut(s)	122, 1473
BfuAI	ACCTGC	1 cut(s)	1432
BglII	AGATCT	3 cut(s)	1060, 1104, 1123
BisI	GCNGC	7 cut(s)	28, 31, 349, 380, 383, 715, 1788
BlnI	CCTAGG	1 cut(s)	404
BlsI	GCNGC	7 cut(s)	29, 32, 350, 381, 384, 716, 1789
Bme1390I	CCNGG	6 cut(s)	42, 168, 387, 430, 612, 1730
Bme18I	GGWCC	3 cut(s)	247, 614, 1177
BmgT120I	GGNCC	4 cut(s)	247, 614, 1177, 1329
BmiI	GGNNCC	6 cut(s)	1178, 1179, 1200, 1366, 1531, 1707
BmrFI	CCNGG	6 cut(s)	42, 168, 387, 430, 612, 1730
BmrI	ACTGGG	2 cut(s)	13, 1591
BmsI	GCATC	4 cut(s)	496, 1239, 1279, 1798
BmuI	ACTGGG	2 cut(s)	13, 1591
BpuEI	CTTGAG	2 cut(s)	134, 764
BpuMI	CCSGG	2 cut(s)	387, 430
BsaBI	GATNNNNATC	2 cut(s)	1059, 1812
BsaHI	GRCGYC	1 cut(s)	1718
BsaI	GGTCTC	1 cut(s)	1414
BsaJI	CCNNGG	6 cut(s)	40, 386, 404, 610, 1360, 1729
BsaWI	WCCGGW	1 cut(s)	187
BsaXI	ACNNNNNCTCC	4 cut(s)	324, 354, 430, 460
Bse118I	RCCGGY	1 cut(s)	1683
Bse1I	ACTGG	4 cut(s)	19, 1213, 1586, 1664
Bse8I	GATNNNNATC	2 cut(s)	1059, 1812
BseAI	TCCGGA	1 cut(s)	187
BseBI	CCWGG	4 cut(s)	42, 168, 612, 1730
BseDI	CCNNGG	6 cut(s)	40, 386, 404, 610, 1360, 1729
BseGI	GGATG	4 cut(s)	511, 691, 754, 763
BseJI	GATNNNNATC	2 cut(s)	1059, 1812
BseMII	CTCAG	6 cut(s)	231, 247, 273, 918, 1092, 1782
BseNI	ACTGG	4 cut(s)	19, 1213, 1586, 1664
BseRI	GAGGAG	3 cut(s)	426, 1356, 1787
BseXI	GCAGC	2 cut(s)	39, 42
Bsh1236I	CGCG	2 cut(s)	294, 1168
BshFI	GGCC	3 cut(s)	941, 994, 1331
BsiHKAI	GWGCWC	1 cut(s)	456
BsiSI	CCGG	4 cut(s)	188, 386, 429, 1684
BslFI	GGGAC	3 cut(s)	1163, 1705, 1746
BsmAI	GTCTC	2 cut(s)	1414, 1709
BsmBI	CGTCTC	1 cut(s)	1709
BsmFI	GGGAC	3 cut(s)	1163, 1705, 1746
BsmI	GAATGC	1 cut(s)	1455
BsnI	GGCC	3 cut(s)	941, 994, 1331
Bso31I	GGTCTC	1 cut(s)	1414
Bsp1286I	GDGCHC	2 cut(s)	456, 591
Bsp13I	TCCGGA	1 cut(s)	187
Bsp1407I	TGTACA	1 cut(s)	1153
Bsp19I	CCATGG	1 cut(s)	1360
BspANI	GGCC	3 cut(s)	941, 994, 1331
BspCNI	CTCAG	6 cut(s)	230, 246, 274, 919, 1093, 1783
BspEI	TCCGGA	1 cut(s)	187
BspFNI	CGCG	2 cut(s)	294, 1168
BspHI	TCATGA	1 cut(s)	1594
BspLI	GGNNCC	6 cut(s)	1178, 1179, 1200, 1366, 1531, 1707
BspMAI	CTGCAG	1 cut(s)	126
BspMI	ACCTGC	1 cut(s)	1432
BspPI	GGATC	7 cut(s)	1027, 1193, 1206, 1524, 1537, 1700, 1713
BspTNI	GGTCTC	1 cut(s)	1414
BsrFI	RCCGGY	1 cut(s)	1683
BsrGI	TGTACA	1 cut(s)	1153
BsrI	ACTGG	4 cut(s)	19, 1213, 1586, 1664
BssAI	RCCGGY	1 cut(s)	1683
BssECI	CCNNGG	6 cut(s)	40, 386, 404, 610, 1360, 1729
BssNAI	GTATAC	1 cut(s)	1400
BssNI	GRCGYC	1 cut(s)	1718
BssT1I	CCWWGG	2 cut(s)	404, 1360
Bst1107I	GTATAC	1 cut(s)	1400
Bst2UI	CCWGG	4 cut(s)	42, 168, 612, 1730
Bst4CI	ACNGT	3 cut(s)	1116, 1474, 1612
Bst6I	CTCTTC	1 cut(s)	657
BstACI	GRCGYC	1 cut(s)	1718
BstAUI	TGTACA	1 cut(s)	1153
BstC8I	GCNNGC	5 cut(s)	625, 1003, 1170, 1455, 1646
BstDEI	CTNAG	7 cut(s)	217, 233, 282, 824, 927, 1101, 1791
BstDSI	CCRYGG	1 cut(s)	1360
BstENI	CCTNNNNNAGG	1 cut(s)	408
BstF5I	GGATG	4 cut(s)	511, 691, 754, 763
BstFNI	CGCG	2 cut(s)	294, 1168
BstMAI	GTCTC	2 cut(s)	1414, 1709
BstMWI	GCNNNNNNNGC	3 cut(s)	130, 249, 1641
BstNI	CCWGG	4 cut(s)	42, 168, 612, 1730
BstSCI	CCNGG	6 cut(s)	40, 166, 385, 428, 610, 1728
BstSFI	CTRYAG	2 cut(s)	122, 1473
BstUI	CGCG	2 cut(s)	294, 1168
BstV1I	GCAGC	2 cut(s)	39, 42
BstX2I	RGATCY	6 cut(s)	1060, 1104, 1123, 1198, 1529, 1705
BstXI	CCANNNNNNTGG	1 cut(s)	41
BstYI	RGATCY	6 cut(s)	1060, 1104, 1123, 1198, 1529, 1705
BstZ17I	GTATAC	1 cut(s)	1400
BsuRI	GGCC	3 cut(s)	941, 994, 1331
BtgI	CCRYGG	1 cut(s)	1360
BtsCI	GGATG	4 cut(s)	511, 691, 754, 763
BtsIMutI	CAGTG	2 cut(s)	1206, 1470
BveI	ACCTGC	1 cut(s)	1432
Cac8I	GCNNGC	5 cut(s)	625, 1003, 1170, 1455, 1646
CciI	TCATGA	1 cut(s)	1594
Cfr10I	RCCGGY	1 cut(s)	1683
Cfr13I	GGNCC	4 cut(s)	247, 614, 1177, 1329
CseI	GACGC	1 cut(s)	1174
Csp6I	GTAC	2 cut(s)	844, 1154
CviAII	CATG	5 cut(s)	352, 1023, 1361, 1595, 1724
CviQI	GTAC	2 cut(s)	844, 1154
DdeI	CTNAG	7 cut(s)	217, 233, 282, 824, 927, 1101, 1791
DraIII	CACNNNGTG	1 cut(s)	460
Eam1104I	CTCTTC	1 cut(s)	657
EarI	CTCTTC	1 cut(s)	657
Eco130I	CCWWGG	2 cut(s)	404, 1360
Eco24I	GRGCYC	1 cut(s)	591
Eco31I	GGTCTC	1 cut(s)	1414
Eco47I	GGWCC	3 cut(s)	247, 614, 1177
Eco57I	CTGAAG	1 cut(s)	1017
EcoNI	CCTNNNNNAGG	1 cut(s)	408
EcoO109I	RGGNCCY	1 cut(s)	1177
EcoRI	GAATTC	1 cut(s)	265
EcoRII	CCWGG	4 cut(s)	40, 166, 610, 1728
EcoT14I	CCWWGG	2 cut(s)	404, 1360
EcoT22I	ATGCAT	2 cut(s)	1232, 1700
EcoT38I	GRGCYC	1 cut(s)	591
ErhI	CCWWGG	2 cut(s)	404, 1360
Esp3I	CGTCTC	1 cut(s)	1709
FaeI	CATG	5 cut(s)	355, 1026, 1364, 1598, 1727
FalI	AAGNNNNNCTT	2 cut(s)	990, 1022
FaqI	GGGAC	3 cut(s)	1163, 1705, 1746
FatI	CATG	5 cut(s)	351, 1022, 1360, 1594, 1723
FauI	CCCGC	3 cut(s)	628, 1446, 1641
FbaI	TGATCA	1 cut(s)	1501
FblI	GTMKAC	3 cut(s)	1399, 1509, 1743
Fnu4HI	GCNGC	7 cut(s)	28, 31, 349, 380, 383, 715, 1788
FokI	GGATG	4 cut(s)	518, 698, 761, 770
FriOI	GRGCYC	1 cut(s)	591
Fsp4HI	GCNGC	7 cut(s)	28, 31, 349, 380, 383, 715, 1788
FspBI	CTAG	7 cut(s)	405, 483, 576, 1145, 1173, 1374, 1848
GluI	GCNGC	7 cut(s)	28, 31, 349, 380, 383, 715, 1788
HaeIII	GGCC	3 cut(s)	941, 994, 1331
HapII	CCGG	4 cut(s)	188, 386, 429, 1684
HgaI	GACGC	1 cut(s)	1174
Hin1I	GRCGYC	1 cut(s)	1718
Hin1II	CATG	5 cut(s)	355, 1026, 1364, 1598, 1727
HindIII	AAGCTT	2 cut(s)	1190, 1262
HinfI	GANTC	8 cut(s)	191, 305, 320, 425, 665, 791, 911, 1344
HpaII	CCGG	4 cut(s)	188, 386, 429, 1684
HphI	GGTGA	4 cut(s)	557, 731, 1084, 1091
Hpy166II	GTNNAC	5 cut(s)	617, 1400, 1442, 1510, 1744
Hpy188I	TCNGA	8 cut(s)	182, 220, 283, 395, 655, 802, 1102, 1138
Hpy8I	GTNNAC	5 cut(s)	617, 1400, 1442, 1510, 1744
Hpy99I	CGWCG	3 cut(s)	65, 294, 344
HpyCH4III	ACNGT	3 cut(s)	1116, 1474, 1612
HpyCH4IV	ACGT	2 cut(s)	1718, 1783
HpyF10VI	GCNNNNNNNGC	3 cut(s)	130, 249, 1641
HpyF3I	CTNAG	7 cut(s)	217, 233, 282, 824, 927, 1101, 1791
HpySE526I	ACGT	2 cut(s)	1718, 1783
Hsp92I	GRCGYC	1 cut(s)	1718
Hsp92II	CATG	5 cut(s)	355, 1026, 1364, 1598, 1727
KflI	GGGWCCC	1 cut(s)	1177
Kpn2I	TCCGGA	1 cut(s)	187
Ksp22I	TGATCA	1 cut(s)	1501
LmnI	GCTCC	4 cut(s)	313, 432, 451, 895
Lsp1109I	GCAGC	2 cut(s)	39, 42
LweI	GCATC	4 cut(s)	496, 1239, 1279, 1798
MaeI	CTAG	7 cut(s)	405, 483, 576, 1145, 1173, 1374, 1848
MaeII	ACGT	2 cut(s)	1718, 1783
MaeIII	GTNAC	2 cut(s)	1204, 1468
MboII	GAAGA	8 cut(s)	560, 674, 734, 944, 1094, 1097, 1259, 1424
MfeI	CAATTG	1 cut(s)	1304
MflI	RGATCY	6 cut(s)	1060, 1104, 1123, 1198, 1529, 1705
MhlI	GDGCHC	2 cut(s)	456, 591
MluI	ACGCGT	1 cut(s)	1166
MlyI	GAGTC	2 cut(s)	674, 1353
MmeI	TCCRAC	1 cut(s)	294
Mph1103I	ATGCAT	2 cut(s)	1232, 1700
MroI	TCCGGA	1 cut(s)	187
MseI	TTAA	1 cut(s)	1092
MspA1I	CMGCKG	3 cut(s)	623, 1417, 1790
MspI	CCGG	4 cut(s)	188, 386, 429, 1684
MspR9I	CCNGG	6 cut(s)	42, 168, 387, 430, 612, 1730
MunI	CAATTG	1 cut(s)	1304
Mva1269I	GAATGC	1 cut(s)	1455
MvaI	CCWGG	4 cut(s)	42, 168, 612, 1730
MvnI	CGCG	2 cut(s)	294, 1168
MwoI	GCNNNNNNNGC	3 cut(s)	130, 249, 1641
NciI	CCSGG	2 cut(s)	387, 430
NcoI	CCATGG	1 cut(s)	1360
NlaIII	CATG	5 cut(s)	355, 1026, 1364, 1598, 1727
NlaIV	GGNNCC	6 cut(s)	1178, 1179, 1200, 1366, 1531, 1707
NmuCI	GTSAC	2 cut(s)	1204, 1468
NsiI	ATGCAT	2 cut(s)	1232, 1700
PagI	TCATGA	1 cut(s)	1594
PctI	GAATGC	1 cut(s)	1455
PfeI	GAWTC	6 cut(s)	191, 305, 320, 425, 791, 911
PflMI	CCANNNNNTGG	2 cut(s)	623, 1729
PfoI	TCCNGGA	1 cut(s)	428
PkrI	GCNGC	7 cut(s)	29, 32, 350, 381, 384, 716, 1789
PleI	GAGTC	2 cut(s)	673, 1352
PpsI	GAGTC	2 cut(s)	673, 1352
PpuMI	RGGWCCY	1 cut(s)	1177
Psp5II	RGGWCCY	1 cut(s)	1177
Psp6I	CCWGG	4 cut(s)	40, 166, 610, 1728
PspGI	CCWGG	4 cut(s)	40, 166, 610, 1728
PspN4I	GGNNCC	6 cut(s)	1178, 1179, 1200, 1366, 1531, 1707
PspPI	GGNCC	4 cut(s)	247, 614, 1177, 1329
PspPPI	RGGWCCY	1 cut(s)	1177
PstI	CTGCAG	1 cut(s)	126
PsuI	RGATCY	6 cut(s)	1060, 1104, 1123, 1198, 1529, 1705
RsaI	GTAC	2 cut(s)	845, 1155
RsaNI	GTAC	2 cut(s)	844, 1154
SaqAI	TTAA	1 cut(s)	1092
SatI	GCNGC	7 cut(s)	28, 31, 349, 380, 383, 715, 1788
Sau96I	GGNCC	4 cut(s)	247, 614, 1177, 1329
SchI	GAGTC	2 cut(s)	674, 1353
ScrFI	CCNGG	6 cut(s)	42, 168, 387, 430, 612, 1730
SduI	GDGCHC	2 cut(s)	456, 591
SfaNI	GCATC	4 cut(s)	496, 1239, 1279, 1798
SfcI	CTRYAG	2 cut(s)	122, 1473
SinI	GGWCC	3 cut(s)	247, 614, 1177
SmlI	CTYRAG	2 cut(s)	149, 743
SmoI	CTYRAG	2 cut(s)	149, 743
SspMI	CTAG	7 cut(s)	405, 483, 576, 1145, 1173, 1374, 1848
StyD4I	CCNGG	6 cut(s)	40, 166, 385, 428, 610, 1728
StyI	CCWWGG	2 cut(s)	404, 1360
TaaI	ACNGT	3 cut(s)	1116, 1474, 1612
TaiI	ACGT	2 cut(s)	1721, 1786
TaqI	TCGA	8 cut(s)	86, 303, 323, 556, 562, 681, 794, 1337
TaqII	GACCGA	1 cut(s)	1456
TatI	WGTACW	1 cut(s)	1153
TauI	GCSGC	5 cut(s)	351, 382, 385, 717, 1790
TfiI	GAWTC	6 cut(s)	191, 305, 320, 425, 791, 911
Tru1I	TTAA	1 cut(s)	1092
Tru9I	TTAA	1 cut(s)	1092
TscAI	CASTG	2 cut(s)	1213, 1477
TseFI	GTSAC	2 cut(s)	1204, 1468
TseI	GCWGC	2 cut(s)	27, 30
Tsp45I	GTSAC	2 cut(s)	1204, 1468
TspDTI	ATGAA	5 cut(s)	267, 689, 765, 1023, 1365
TspGWI	ACGGA	4 cut(s)	94, 770, 1609, 1698
TspRI	CASTG	2 cut(s)	1213, 1477
Van91I	CCANNNNNTGG	2 cut(s)	623, 1729
VpaK11BI	GGWCC	3 cut(s)	247, 614, 1177
XagI	CCTNNNNNAGG	1 cut(s)	408
XapI	RAATTY	5 cut(s)	265, 488, 676, 903, 1523
XbaI	TCTAGA	1 cut(s)	1144
XmaJI	CCTAGG	1 cut(s)	404
XmiI	GTMKAC	3 cut(s)	1399, 1509, 1743
XspI	CTAG	7 cut(s)	405, 483, 576, 1145, 1173, 1374, 1848
ZraI	GACGTC	1 cut(s)	1719
Zsp2I	ATGCAT	2 cut(s)	1232, 1700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.