Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0010253

Physical Location & Seq

Genomic Coordinates Forward (+)

11347177 .. 11355734

Gene Structure 8558 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g12540.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGCCGGTAGTGGAGGTGACGCGCCGCCTCTGCCGGCGTCTAACGGCGGCGAATTCCTCCTCTCCTTGCTCCAAAAAGCCCCACACCACCACTACCAAGGTCGCTCGCCCCATCCCCCGCACCAGCAGCAGTCCCCCGTGCTCGATCCCGCCGTCGCCGCCGTGGGCCCCACCGTGCCTTTCCAGCAGCCGTGGGGATCGTCGCCGCCGTCGTCATCCAACGGCCGAGATCATTATCCCCATCAGATTCCGAGCCCTTCGTCGTCTCTCTGGCCCAATTCGCTGTCTCCTCCCCCTCCTTTCAACTTCGTAGGGTTTCCTCAAAACCCTTACTCCTCTCCTCCTCAGTTCGGCACCAACCAATTCAATCAAATCCCAGAAAACCTCGCCGACGAGTTGAGGAAGATCGGCCTGGCCCAGCAGAAACATCACCAAGAACAACAGAAGCTCAAGTTCGGATATTTACCCGGCGATGTAATCCGAAACCCGGAGTTGTCTTCAGCAGCTCCCGTTACTTCCTCTGAAATCGCCAAGCTCAGCAATGGCTTGGACCGCAATCTCCACTTGAATTCCAGCAATTCGTCAGCTTCCAATGAGTTTCGTCGTGCGAATTACGGTTCCGGGGAGGGGGAATTAAGAGGGGGCGGCGGAGGGGAGAGGGGGAAGCAAGTTCATAGGACAATGCCGCCGCCGGGGTTTGGAAACAAGCCTCGGGGAGGAGGGAATTGGGATTCCGGGGGTAGGAGGGGAGGCATGGAGTATAATGTGGATAGGGAGAGGCAGAGTTCTAGTGGATTTGCGAGGAATAGGGAGGGTTCTTTTGACAATGAGAGAGTGAGAAGATTGGCAGGTGAAGATGGTGGGATGAGAGGAAATGGGGATGGTAGAAAGGGGCTCAGTGCACAGCTTGATCGCCCTGGTCCGCCCGCTGGCACGAATCTCCATTCGGTTTCTGCTTCGGAGATTGAGGAGTCGATGATGAATTTCGACGGTGGAGAGAGGGCAAGAAAGGATAGTGACGGGGTTGAAGATGTTGGCCAACACTCGCTTGAGGAGGAAAGGGATGACAAGATTGAGGGGAAGCAACACCATAAGGATTCAAGATCAGATGACAGAGGACAACACCAACTTAGCCAAAGAATGAGATCCTACAAAAGACAAACGCTATGTCGCTTTGACATAGACCGATTTAATGCTCCTTTTCTTGAAATTTTTGACTCCCTGATACCAACTGAGGAAGACAAGGCCAAGCAGAAGCAATTATTAACATTATTGGAGAATATAATATGCAAAGAGTGGCCTGATGCTCGCCTATATATCTATGGATCATGTGGCAACTCATTTGGAGTTTCTAAAAGTGATATTGATCTCTGTCTGGAGATTGGTGAAGAAGATATTAACAAATCTGAGATCTTACTCCGGTTGGCTGAACTTCTGGAGTCAGACAAACTAGAGAACGTACAGGCATTGACACGTGCTAGGGTACCCATAGTAAAGCTTATGGATCCTGTCACTGGAATCTCCTGTGATATATGCATCAACAACATTTTGGCTGTGGTGAATACAAAGCTTCTTCGTGATTATGCAAATATAGATGCAAGATTACGACAATTGGCTTTTATTGTAAAACATTGGGCCAAGTCCAGAGGAGTCAATGAAACTTATCATGGAACCTTATCGAGCTATGCGTATGTTTTGATGTGTATTCATTTCTTACAACAGCGGAGACCTGCTATTCTTCCCTGTTTACAGGGAATGCGGGCAACATACTCTGTCACTGTAGAGAACATTGAATGTGCTTTCTTTGATCAAGTAGACAAGCTTCAAGATTTTGGATCCCATAACAGGGAAACTATTGCTGAACTTGTGTGGGCATTTTTCAATTACTGGGCATATAGCCATGACTACGCAAATACTGTCATATCTGTTCGTAGAGGAAGAACAATCAGCAAGCGGGAAAAGGACTGGACAAGGAGGATTGGAAATGACCGGCATTTGATATGCATAGAGGATCCGTTTGAGACATCCCATGACCTGGGACGAGTTGTGGACAAGCACAGCATAAAAGTTTTGAGGGAGGAGTTTGAACGTGCGGCTGAGATATTGCAGTATGATGCGAATCCCTGTGTGAAGCTCTTTGAACTGTATGTTCCTAGCGTATTACCTTTTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0005488 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016073 GO:0016074 GO:0016180 GO:0016740 GO:0016772 GO:0016779 GO:0019219 GO:0019222 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031325 GO:0034470 GO:0034641 GO:0034660 GO:0043144 GO:0043170 GO:0043628 GO:0043629 GO:0043631 GO:0044237 GO:0044238 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050265 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060147 GO:0060148 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065007 GO:0070569 GO:0070920 GO:0071050 GO:0071076 GO:0071704 GO:0080090 GO:0090065 GO:0090304 GO:0097159 GO:0140098 GO:1900368 GO:1900370 GO:1901360 GO:1901363 GO:1903705

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTP_transf_2 PAP_assoc

Protein Analysis

725

Amino Acids

80.99

Weight (kDa)

6.43

Isoelectric Point (pI)

58.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MTPAP-like_central	PF22600	402 - 529	4.6e-32	Poly(A) RNA polymerase, mitochondrial-like, central palm domain
TUTase	PF19088	411 - 511	3.2e-10	TUTase nucleotidyltransferase domain
PAP_assoc	PF03828	619 - 677	5.9e-20	Cid1 family poly A polymerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010253)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45620
fragaria_vesca	FvH4_7g12540 FvH4_7g12540 FvH4_7g12540 FvH4_7g12540 FvH4_7g12540
malus_domestica	MD02G1198200.v1.1
prunus_persica	Prupe.2G149800_v2.0.a1 Prupe.2G149800_v2.0.a1
pyrus_communis	pycom02g16180
rosa_chinensis	RchiOBHm_Chr1g0351451
rosa_laevigata	RLG00000028407
rosa_multiflora	Rmu_ssc0000403.1_g000022
rosa_roxburghii	Rroxscaffold_4G00303810
rosa_rugosa	Rorug01G0218100 Rorug01G0218200
rosa_samantha	Rh1AG232700 Rh1BG203700 Rh1CG217400 Rh1DG230600
rosa_wichuraiana	Rw1G020260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	839
Acc36I	ACCTGC	2 cut(s)	839, 1738
Acc65I	GGTACC	1 cut(s)	1483
AccB1I	GGYRCC	2 cut(s)	353, 1483
AccB7I	CCANNNNNTGG	1 cut(s)	2035
AccI	GTMKAC	1 cut(s)	1815
AccII	CGCG	1 cut(s)	23
AcoI	YGGCCR	3 cut(s)	3, 223, 1036
AcsI	RAATTY	4 cut(s)	53, 568, 982, 1209
AcuI	CTGAAG	1 cut(s)	483
AcvI	CACGTG	1 cut(s)	1475
AcyI	GRCGYC	1 cut(s)	38
AfaI	GTAC	2 cut(s)	1461, 1485
AflIII	ACRYGT	1 cut(s)	1472
AjnI	CCWGG	3 cut(s)	411, 916, 2034
Alw21I	GWGCWC	2 cut(s)	144, 904
Alw26I	GTCTC	4 cut(s)	270, 291, 1720, 2015
Alw44I	GTGCAC	1 cut(s)	900
Ama87I	CYCGRG	1 cut(s)	711
ApaI	GGGCCC	1 cut(s)	170
ApaLI	GTGCAC	1 cut(s)	900
ApeKI	GCWGC	3 cut(s)	127, 187, 503
ApoI	RAATTY	4 cut(s)	53, 568, 982, 1209
ArsI	GACNNNNNNTTYG	2 cut(s)	1153, 1185
Asp718I	GGTACC	1 cut(s)	1483
AspLEI	GCGC	1 cut(s)	25
AspS9I	GGNCC	7 cut(s)	166, 167, 273, 415, 550, 920, 1635
AsuC2I	CCSGG	5 cut(s)	468, 488, 622, 693, 736
AsuHPI	GGTGA	5 cut(s)	29, 422, 863, 1397, 1570
AvaI	CYCGRG	1 cut(s)	711
AvaII	GGWCC	2 cut(s)	550, 920
BaeGI	GKGCMC	2 cut(s)	170, 904
BalI	TGGCCA	1 cut(s)	1038
BamHI	GGATCC	3 cut(s)	1504, 1835, 2011
BanI	GGYRCC	2 cut(s)	353, 1483
BanII	GRGCYC	3 cut(s)	170, 257, 897
BarI	GAAGNNNNNNTAC	2 cut(s)	1806, 1838
BbrPI	CACGTG	1 cut(s)	1475
BbsI	GAAGAC	2 cut(s)	489, 1245
Bbv12I	GWGCWC	2 cut(s)	144, 904
BbvI	GCAGC	3 cut(s)	139, 199, 515
BccI	CCATC	4 cut(s)	120, 249, 851, 875
BceAI	ACGGC	6 cut(s)	61, 137, 146, 175, 193, 238
BciT130I	CCWGG	3 cut(s)	413, 918, 2036
BclI	TGATCA	1 cut(s)	1807
BcnI	CCSGG	5 cut(s)	468, 488, 622, 693, 736
BcoDI	GTCTC	4 cut(s)	270, 291, 1720, 2015
BfaI	CTAG	5 cut(s)	789, 1451, 1479, 2154, 2173
BfmI	CTRYAG	1 cut(s)	1779
BfuAI	ACCTGC	2 cut(s)	839, 1738
BglII	AGATCT	1 cut(s)	1410
BlpI	GCTNAGC	1 cut(s)	536
Bme1390I	CCNGG	8 cut(s)	413, 468, 488, 622, 693, 736, 918, 2036
Bme18I	GGWCC	2 cut(s)	550, 920
BmeT110I	CYCGRG	1 cut(s)	711
BmgT120I	GGNCC	7 cut(s)	166, 167, 273, 415, 550, 920, 1635
BmiI	GGNNCC	9 cut(s)	168, 169, 355, 619, 1485, 1506, 1672, 1837, 2013
BmrFI	CCNGG	8 cut(s)	413, 468, 488, 622, 693, 736, 918, 2036
BmrI	ACTGGG	1 cut(s)	1897
BmsI	GCATC	4 cut(s)	1294, 1545, 1585, 2104
BmuI	ACTGGG	1 cut(s)	1897
BpiI	GAAGAC	2 cut(s)	489, 1245
BpmI	CTGGAG	2 cut(s)	1397, 1457
Bpu1102I	GCTNAGC	1 cut(s)	536
BpuEI	CTTGAG	2 cut(s)	434, 1070
BpuMI	CCSGG	5 cut(s)	468, 488, 622, 693, 736
BsaAI	YACGTR	1 cut(s)	1475
BsaBI	GATNNNNATC	3 cut(s)	234, 1365, 2118
BsaHI	GRCGYC	1 cut(s)	38
BsaI	GGTCTC	1 cut(s)	1720
BsaJI	CCNNGG	9 cut(s)	97, 162, 191, 621, 692, 710, 735, 916, 2035
BsaWI	WCCGGW	1 cut(s)	1419
BsaXI	ACNNNNNCTCC	2 cut(s)	317, 347
Bse118I	RCCGGY	3 cut(s)	5, 34, 1989
Bse1I	ACTGG	3 cut(s)	1519, 1892, 1970
Bse3DI	GCAATG	1 cut(s)	547
Bse8I	GATNNNNATC	3 cut(s)	234, 1365, 2118
BseBI	CCWGG	3 cut(s)	413, 918, 2036
BseDI	CCNNGG	9 cut(s)	97, 162, 191, 621, 692, 710, 735, 916, 2035
BseGI	GGATG	6 cut(s)	112, 215, 870, 886, 1069, 2024
BseJI	GATNNNNATC	3 cut(s)	234, 1365, 2118
BseMI	GCAATG	1 cut(s)	547
BseMII	CTCAG	6 cut(s)	359, 550, 910, 1224, 1398, 2088
BseNI	ACTGG	3 cut(s)	1519, 1892, 1970
BseSI	GKGCMC	2 cut(s)	170, 904
BseX3I	CGGCCG	1 cut(s)	223
BseXI	GCAGC	3 cut(s)	139, 199, 515
BseYI	CCCAGC	1 cut(s)	417
Bsh1236I	CGCG	1 cut(s)	23
Bsh1285I	CGRYCG	1 cut(s)	226
BshNI	GGYRCC	2 cut(s)	353, 1483
BsiEI	CGRYCG	1 cut(s)	226
BsiHKAI	GWGCWC	2 cut(s)	144, 904
BsiHKCI	CYCGRG	1 cut(s)	711
BsiSI	CCGG	9 cut(s)	6, 35, 468, 488, 621, 692, 735, 1420, 1990
BslFI	GGGAC	2 cut(s)	118, 2052
BsmAI	GTCTC	4 cut(s)	270, 291, 1720, 2015
BsmBI	CGTCTC	1 cut(s)	270
BsmFI	GGGAC	2 cut(s)	118, 2052
BsmI	GAATGC	1 cut(s)	1761
Bso31I	GGTCTC	1 cut(s)	1720
BsoBI	CYCGRG	1 cut(s)	711
Bsp120I	GGGCCC	1 cut(s)	166
Bsp1286I	GDGCHC	5 cut(s)	144, 170, 257, 897, 904
Bsp1720I	GCTNAGC	1 cut(s)	536
BspCNI	CTCAG	6 cut(s)	358, 549, 909, 1225, 1399, 2089
BspFNI	CGCG	1 cut(s)	23
BspLI	GGNNCC	9 cut(s)	168, 169, 355, 619, 1485, 1506, 1672, 1837, 2013
BspMI	ACCTGC	2 cut(s)	839, 1738
BspT107I	GGYRCC	2 cut(s)	353, 1483
BspTNI	GGTCTC	1 cut(s)	1720
BsrDI	GCAATG	1 cut(s)	547
BsrFI	RCCGGY	3 cut(s)	5, 34, 1989
BsrI	ACTGG	3 cut(s)	1519, 1892, 1970
BssAI	RCCGGY	3 cut(s)	5, 34, 1989
BssECI	CCNNGG	9 cut(s)	97, 162, 191, 621, 692, 710, 735, 916, 2035
BssNI	GRCGYC	1 cut(s)	38
BssT1I	CCWWGG	1 cut(s)	97
Bst2UI	CCWGG	3 cut(s)	413, 918, 2036
Bst4CI	ACNGT	6 cut(s)	175, 617, 992, 1780, 1918, 2145
BstACI	GRCGYC	1 cut(s)	38
BstBAI	YACGTR	1 cut(s)	1475
BstC8I	GCNNGC	7 cut(s)	36, 107, 927, 931, 1309, 1761, 1952
BstDEI	CTNAG	7 cut(s)	345, 536, 896, 1130, 1233, 1407, 2097
BstDSI	CCRYGG	2 cut(s)	162, 191
BstENI	CCTNNNNNAGG	1 cut(s)	714
BstF5I	GGATG	6 cut(s)	112, 215, 870, 886, 1069, 2024
BstFNI	CGCG	1 cut(s)	23
BstHHI	GCGC	1 cut(s)	25
BstMAI	GTCTC	4 cut(s)	270, 291, 1720, 2015
BstMCI	CGRYCG	1 cut(s)	226
BstMWI	GCNNNNNNNGC	6 cut(s)	31, 127, 158, 184, 280, 552
BstNI	CCWGG	3 cut(s)	413, 918, 2036
BstSCI	CCNGG	8 cut(s)	411, 466, 486, 620, 691, 734, 916, 2034
BstSFI	CTRYAG	1 cut(s)	1779
BstSLI	GKGCMC	2 cut(s)	170, 904
BstUI	CGCG	1 cut(s)	23
BstV1I	GCAGC	3 cut(s)	139, 199, 515
BstV2I	GAAGAC	2 cut(s)	489, 1245
BstX2I	RGATCY	5 cut(s)	1145, 1410, 1504, 1835, 2011
BstYI	RGATCY	5 cut(s)	1145, 1410, 1504, 1835, 2011
BstZI	CGGCCG	1 cut(s)	223
BtgI	CCRYGG	2 cut(s)	162, 191
BtgZI	GCGATG	1 cut(s)	486
BtsCI	GGATG	6 cut(s)	112, 215, 870, 886, 1069, 2024
BtsIMutI	CAGTG	3 cut(s)	904, 1512, 1776
BveI	ACCTGC	2 cut(s)	839, 1738
Cac8I	GCNNGC	7 cut(s)	36, 107, 927, 931, 1309, 1761, 1952
CfoI	GCGC	1 cut(s)	25
Cfr10I	RCCGGY	3 cut(s)	5, 34, 1989
Cfr13I	GGNCC	7 cut(s)	166, 167, 273, 415, 550, 920, 1635
CseI	GACGC	2 cut(s)	27, 29
Csp6I	GTAC	2 cut(s)	1460, 1484
CviAII	CATG	5 cut(s)	754, 1329, 1667, 1901, 2030
CviQI	GTAC	2 cut(s)	1460, 1484
DdeI	CTNAG	7 cut(s)	345, 536, 896, 1130, 1233, 1407, 2097
EaeI	YGGCCR	3 cut(s)	3, 223, 1036
EagI	CGGCCG	1 cut(s)	223
EciI	GGCGGA	2 cut(s)	663, 912
EclXI	CGGCCG	1 cut(s)	223
Eco130I	CCWWGG	1 cut(s)	97
Eco24I	GRGCYC	3 cut(s)	170, 257, 897
Eco31I	GGTCTC	1 cut(s)	1720
Eco47I	GGWCC	2 cut(s)	550, 920
Eco52I	CGGCCG	1 cut(s)	223
Eco57I	CTGAAG	1 cut(s)	483
Eco72I	CACGTG	1 cut(s)	1475
Eco88I	CYCGRG	1 cut(s)	711
EcoNI	CCTNNNNNAGG	1 cut(s)	714
EcoO109I	RGGNCCY	1 cut(s)	167
EcoRI	GAATTC	2 cut(s)	53, 568
EcoRII	CCWGG	3 cut(s)	411, 916, 2034
EcoT14I	CCWWGG	1 cut(s)	97
EcoT22I	ATGCAT	2 cut(s)	1538, 2006
EcoT38I	GRGCYC	3 cut(s)	170, 257, 897
ErhI	CCWWGG	1 cut(s)	97
Esp3I	CGTCTC	1 cut(s)	270
FaeI	CATG	5 cut(s)	757, 1332, 1670, 1904, 2033
FaqI	GGGAC	2 cut(s)	118, 2052
FatI	CATG	5 cut(s)	753, 1328, 1666, 1900, 2029
FauI	CCCGC	5 cut(s)	126, 157, 934, 1752, 1947
FbaI	TGATCA	1 cut(s)	1807
FblI	GTMKAC	1 cut(s)	1815
FokI	GGATG	6 cut(s)	99, 202, 877, 893, 1076, 2011
FriOI	GRGCYC	3 cut(s)	170, 257, 897
FspBI	CTAG	5 cut(s)	789, 1451, 1479, 2154, 2173
GlaI	GCGC	1 cut(s)	24
GsaI	CCCAGC	1 cut(s)	421
GsuI	CTGGAG	2 cut(s)	1397, 1457
HapII	CCGG	9 cut(s)	6, 35, 468, 488, 621, 692, 735, 1420, 1990
HgaI	GACGC	2 cut(s)	27, 29
HhaI	GCGC	1 cut(s)	25
Hin1I	GRCGYC	1 cut(s)	38
Hin1II	CATG	5 cut(s)	757, 1332, 1670, 1904, 2033
Hin6I	GCGC	1 cut(s)	23
HinP1I	GCGC	1 cut(s)	23
HindIII	AAGCTT	3 cut(s)	1496, 1568, 1820
HpaII	CCGG	9 cut(s)	6, 35, 468, 488, 621, 692, 735, 1420, 1990
HphI	GGTGA	5 cut(s)	29, 422, 863, 1397, 1570
Hpy166II	GTNNAC	4 cut(s)	902, 1748, 1816, 2050
Hpy188I	TCNGA	9 cut(s)	246, 252, 458, 482, 523, 961, 1108, 1408, 1444
Hpy188III	TCNNGA	7 cut(s)	1101, 1205, 1376, 1436, 1577, 1644, 1826
Hpy8I	GTNNAC	4 cut(s)	902, 1748, 1816, 2050
Hpy99I	CGWCG	7 cut(s)	158, 205, 214, 265, 395, 606, 992
HpyAV	CCTTC	1 cut(s)	267
HpyCH4III	ACNGT	6 cut(s)	175, 617, 992, 1780, 1918, 2145
HpyCH4IV	ACGT	3 cut(s)	1458, 1474, 2089
HpyCH4V	TGCA	7 cut(s)	902, 1290, 1536, 1586, 1598, 2004, 2107
HpyF10VI	GCNNNNNNNGC	6 cut(s)	31, 127, 158, 184, 280, 552
HpyF3I	CTNAG	7 cut(s)	345, 536, 896, 1130, 1233, 1407, 2097
HpySE526I	ACGT	3 cut(s)	1458, 1474, 2089
Hsp92I	GRCGYC	1 cut(s)	38
Hsp92II	CATG	5 cut(s)	757, 1332, 1670, 1904, 2033
HspAI	GCGC	1 cut(s)	23
KpnI	GGTACC	1 cut(s)	1487
KroI	GCCGGC	1 cut(s)	34
KroNI	GCCGGC	1 cut(s)	36
Ksp22I	TGATCA	1 cut(s)	1807
LmnI	GCTCC	3 cut(s)	75, 511, 1201
Lsp1109I	GCAGC	3 cut(s)	139, 199, 515
LweI	GCATC	4 cut(s)	1294, 1545, 1585, 2104
MaeI	CTAG	5 cut(s)	789, 1451, 1479, 2154, 2173
MaeII	ACGT	3 cut(s)	1458, 1474, 2089
MaeIII	GTNAC	5 cut(s)	17, 511, 1016, 1510, 1774
MfeI	CAATTG	1 cut(s)	1610
MflI	RGATCY	5 cut(s)	1145, 1410, 1504, 1835, 2011
MhlI	GDGCHC	5 cut(s)	144, 170, 257, 897, 904
MlsI	TGGCCA	1 cut(s)	1038
MluNI	TGGCCA	1 cut(s)	1038
MlyI	GAGTC	4 cut(s)	980, 1211, 1448, 1659
MmeI	TCCRAC	1 cut(s)	243
Mox20I	TGGCCA	1 cut(s)	1038
Mph1103I	ATGCAT	2 cut(s)	1538, 2006
MroNI	GCCGGC	1 cut(s)	34
MscI	TGGCCA	1 cut(s)	1038
MseI	TTAA	4 cut(s)	635, 1191, 1265, 1398
Msp20I	TGGCCA	1 cut(s)	1038
MspA1I	CMGCKG	2 cut(s)	929, 1723
MspI	CCGG	9 cut(s)	6, 35, 468, 488, 621, 692, 735, 1420, 1990
MspR9I	CCNGG	8 cut(s)	413, 468, 488, 622, 693, 736, 918, 2036
MunI	CAATTG	1 cut(s)	1610
Mva1269I	GAATGC	1 cut(s)	1761
MvaI	CCWGG	3 cut(s)	413, 918, 2036
MvnI	CGCG	1 cut(s)	23
MwoI	GCNNNNNNNGC	6 cut(s)	31, 127, 158, 184, 280, 552
NaeI	GCCGGC	1 cut(s)	36
NciI	CCSGG	5 cut(s)	468, 488, 622, 693, 736
NgoMIV	GCCGGC	1 cut(s)	34
NlaIII	CATG	5 cut(s)	757, 1332, 1670, 1904, 2033
NlaIV	GGNNCC	9 cut(s)	168, 169, 355, 619, 1485, 1506, 1672, 1837, 2013
NmeAIII	GCCGAG	1 cut(s)	251
NmuCI	GTSAC	4 cut(s)	17, 1016, 1510, 1774
NsiI	ATGCAT	2 cut(s)	1538, 2006
PaqCI	CACCTGC	1 cut(s)	839
PcsI	WCGNNNNNNNCGW	4 cut(s)	150, 206, 209, 1685
PctI	GAATGC	1 cut(s)	1761
PdiI	GCCGGC	1 cut(s)	36
PfeI	GAWTC	6 cut(s)	247, 731, 937, 1097, 1518, 2119
PflMI	CCANNNNNTGG	1 cut(s)	2035
PleI	GAGTC	4 cut(s)	979, 1211, 1447, 1658
PmaCI	CACGTG	1 cut(s)	1475
PmlI	CACGTG	1 cut(s)	1475
PpsI	GAGTC	4 cut(s)	979, 1211, 1447, 1658
Ppu21I	YACGTR	1 cut(s)	1475
Psp6I	CCWGG	3 cut(s)	411, 916, 2034
PspCI	CACGTG	1 cut(s)	1475
PspFI	CCCAGC	1 cut(s)	417
PspGI	CCWGG	3 cut(s)	411, 916, 2034
PspN4I	GGNNCC	9 cut(s)	168, 169, 355, 619, 1485, 1506, 1672, 1837, 2013
PspOMI	GGGCCC	1 cut(s)	166
PspPI	GGNCC	7 cut(s)	166, 167, 273, 415, 550, 920, 1635
PsuI	RGATCY	5 cut(s)	1145, 1410, 1504, 1835, 2011
RsaI	GTAC	2 cut(s)	1461, 1485
RsaNI	GTAC	2 cut(s)	1460, 1484
SaqAI	TTAA	4 cut(s)	635, 1191, 1265, 1398
Sau96I	GGNCC	7 cut(s)	166, 167, 273, 415, 550, 920, 1635
SchI	GAGTC	4 cut(s)	980, 1211, 1448, 1659
ScrFI	CCNGG	8 cut(s)	413, 468, 488, 622, 693, 736, 918, 2036
SduI	GDGCHC	5 cut(s)	144, 170, 257, 897, 904
SfaNI	GCATC	4 cut(s)	1294, 1545, 1585, 2104
SfcI	CTRYAG	1 cut(s)	1779
SinI	GGWCC	2 cut(s)	550, 920
SmlI	CTYRAG	2 cut(s)	449, 1049
SmoI	CTYRAG	2 cut(s)	449, 1049
SspMI	CTAG	5 cut(s)	789, 1451, 1479, 2154, 2173
StyD4I	CCNGG	8 cut(s)	411, 466, 486, 620, 691, 734, 916, 2034
StyI	CCWWGG	1 cut(s)	97
TaaI	ACNGT	6 cut(s)	175, 617, 992, 1780, 1918, 2145
TaiI	ACGT	3 cut(s)	1461, 1477, 2092
TaqI	TCGA	4 cut(s)	144, 974, 987, 1679
TaqII	GACCGA	1 cut(s)	1200
TauI	GCSGC	8 cut(s)	28, 51, 161, 208, 648, 688, 691, 2096
TfiI	GAWTC	6 cut(s)	247, 731, 937, 1097, 1518, 2119
Tru1I	TTAA	4 cut(s)	635, 1191, 1265, 1398
Tru9I	TTAA	4 cut(s)	635, 1191, 1265, 1398
TscAI	CASTG	3 cut(s)	904, 1519, 1783
TseFI	GTSAC	4 cut(s)	17, 1016, 1510, 1774
TseI	GCWGC	3 cut(s)	127, 187, 503
Tsp45I	GTSAC	4 cut(s)	17, 1016, 1510, 1774
TspDTI	ATGAA	4 cut(s)	662, 995, 1671, 1697
TspGWI	ACGGA	1 cut(s)	2004
TspRI	CASTG	3 cut(s)	904, 1519, 1783
Van91I	CCANNNNNTGG	1 cut(s)	2035
VneI	GTGCAC	1 cut(s)	900
VpaK11BI	GGWCC	2 cut(s)	550, 920
XagI	CCTNNNNNAGG	1 cut(s)	714
XapI	RAATTY	4 cut(s)	53, 568, 982, 1209
XmiI	GTMKAC	1 cut(s)	1815
XspI	CTAG	5 cut(s)	789, 1451, 1479, 2154, 2173
Zsp2I	ATGCAT	2 cut(s)	1538, 2006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.