AT2G46320

Mitochondrial carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0007653
Physical Location & Seq
Forward (+)
19015808 .. 19018491
2684 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G46320.4

Sequence Viewer

Length: 1086 bp
ATGGTGGAAGAAGCACAATTGGATCCTAAATCGAAATCGATTCCGAATGAGAATTTGAAATTTGGAGAAAGGGCTTTGTCTGCCGGAGGCGCCGCTTTTATATCGGCGGTCATAGTCAATCCTCTCGATGTTGTTAAGACGAGATTACAAGCACAGGCTGCAGGAGTTCCGTATCAAGGCTCGTGTCGTCTTGGTTGTTTCGACACGAATTCCACGTTGGTACATGATTTGAGAAGTAATTCTGCTCCAGGGATGTGTAGAATTACTGGCTCTGCATCTGTATGCTCAGATAATCAGTACAAGGGAACTCTTGATGTTTTCTACAAAATTATCCGCCAGGAAGGGTTTTCTAGGCTTTGGAGAGGTACAAACGCAAGTTTAACTTTAGCCATTCCGACTGTTGGGATCTACATGCCTTGTTATGATTATTTTCGCAACATAATGGAGGAGTTCACGACTGAGAAGTCTCCATCTTTGACGGTTTATGTCCCTCTAGTTGCTGGGACAATAGCACGCTCCTTGGCTTGTATCTCTTGTTACCCTGTTGAGTTAGCAAGGACACGGATGCAGGCATTTAAGGGAACGCAAAGAAATGTGAAACTGCCTGGCGTTTGGAAGACATTAGTTGACGTCGTCAATCCAGTGAAGGGCTCAAATAATGGATATAGGATGTTATGGACTGGTCTTGGTGCTCAACTTGCTAGGGATGTTCCATTCTCTGCAATCTGCTGGTCGATACTTGAGCCTACCCGGAGAAGCATTCAGTCGGCCATGGGTGAAGAACCAAGGGCAGGCAGTATAATAGGTGCAAACTTCGCTGCTGGTTTTGTTGCGGGTGCAGTTGCTGCAGCAGCTACTTGCCCTCTAGATGTTGCAAAGACTAGGCGTCAAATAGAGAAGAACACAGATAGAGCCATGACAATGACCACAAGACAAACCTTGGCAGAGATTTGGAGGGACGGAGGGATGAGAGGGATGTTTAGTGGAGCAGGGGCTAGAGTGGGACGAGCAGGACCATCTGTAGCCATTGTGGTATCGTTTTACGAAGTGGTCAAGTACGGACTGCACAACTTCCACCAACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

361

Amino Acids

39.16

Weight (kDa)

9.44

Isoelectric Point (pI)

36.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 60 - 156 1.2e-13 Mitochondrial carrier protein
Mito_carr PF00153 170 - 222 1e-08 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 463
AatII GACGTC 1 cut(s) 633
AccB1I GGYRCC 1 cut(s) 89
AciI CCGC 4 cut(s) 93, 107, 334, 833
AclWI GGATC 3 cut(s) 17, 30, 413
AcoI YGGCCR 1 cut(s) 768
AcsI RAATTY 3 cut(s) 52, 59, 208
AcyI GRCGYC 3 cut(s) 90, 630, 886
AfaI GTAC 4 cut(s) 222, 299, 367, 1058
AfiI CCNNNNNNNGG 4 cut(s) 176, 401, 647, 791
AgsI TTSAA 1 cut(s) 58
AhdI GACNNNNNGTC 1 cut(s) 885
AjnI CCWGG 3 cut(s) 247, 336, 604
AjuI GAANNNNNNNTTGG 2 cut(s) 200, 232
AluBI AGCT 1 cut(s) 854
AluI AGCT 1 cut(s) 854
Alw21I GWGCWC 1 cut(s) 694
Alw26I GTCTC 1 cut(s) 471
AlwI GGATC 3 cut(s) 17, 30, 413
AlwNI CAGNNNCTG 1 cut(s) 845
AoxI GGCC 1 cut(s) 768
ApeKI GCWGC 5 cut(s) 158, 818, 845, 848, 851
ApoI RAATTY 3 cut(s) 52, 59, 208
Asp700I GAANNNNTTC 1 cut(s) 238
AspLEI GCGC 1 cut(s) 92
AspS9I GGNCC 1 cut(s) 1013
AsuC2I CCSGG 1 cut(s) 751
AsuHPI GGTGA 1 cut(s) 788
AvaII GGWCC 1 cut(s) 1013
BamHI GGATCC 1 cut(s) 22
BanI GGYRCC 1 cut(s) 89
BanII GRGCYC 1 cut(s) 653
BauI CACGAG 1 cut(s) 181
BbsI GAAGAC 1 cut(s) 623
Bbv12I GWGCWC 1 cut(s) 694
BbvI GCAGC 5 cut(s) 145, 805, 832, 860, 863
BccI CCATC 2 cut(s) 478, 1024
BciT130I CCWGG 3 cut(s) 249, 338, 606
BcnI CCSGG 1 cut(s) 751
BcoDI GTCTC 1 cut(s) 471
BfaI CTAG 6 cut(s) 351, 494, 702, 866, 882, 996
BfmI CTRYAG 3 cut(s) 159, 846, 1020
BfoI RGCGCY 1 cut(s) 93
BisI GCNGC 6 cut(s) 93, 159, 819, 846, 849, 852
BlsI GCNGC 6 cut(s) 94, 160, 820, 847, 850, 853
Bme1390I CCNGG 4 cut(s) 249, 338, 606, 751
Bme18I GGWCC 1 cut(s) 1013
BmeRI GACNNNNNGTC 1 cut(s) 885
BmgT120I GGNCC 1 cut(s) 1013
BmiI GGNNCC 2 cut(s) 24, 91
BmrFI CCNGG 4 cut(s) 249, 338, 606, 751
BmsI GCATC 2 cut(s) 284, 555
BpiI GAAGAC 1 cut(s) 623
BpmI CTGGAG 1 cut(s) 231
BpuEI CTTGAG 1 cut(s) 761
BpuMI CCSGG 1 cut(s) 751
Bsa29I ATCGAT 1 cut(s) 38
BsaHI GRCGYC 3 cut(s) 90, 630, 886
BsaJI CCNNGG 5 cut(s) 248, 519, 771, 785, 939
Bsc4I CCNNNNNNNGG 4 cut(s) 176, 401, 647, 791
Bse1I ACTGG 3 cut(s) 271, 641, 685
BseBI CCWGG 3 cut(s) 249, 338, 606
BseCI ATCGAT 1 cut(s) 38
BseDI CCNNGG 5 cut(s) 248, 519, 771, 785, 939
BseGI GGATG 6 cut(s) 258, 570, 675, 712, 972, 981
BseLI CCNNNNNNNGG 4 cut(s) 176, 401, 647, 791
BseMII CTCAG 2 cut(s) 300, 450
BseNI ACTGG 3 cut(s) 271, 641, 685
BseRI GAGGAG 1 cut(s) 461
BseXI GCAGC 5 cut(s) 145, 805, 832, 860, 863
BseYI CCCAGC 1 cut(s) 500
BsgI GTGCAG 2 cut(s) 858, 1049
BshFI GGCC 1 cut(s) 770
BshNI GGYRCC 1 cut(s) 89
BshVI ATCGAT 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 694
BsiSI CCGG 2 cut(s) 84, 751
BslFI GGGAC 4 cut(s) 473, 517, 971, 1017
BslI CCNNNNNNNGG 4 cut(s) 176, 401, 647, 791
BsmAI GTCTC 1 cut(s) 471
BsmFI GGGAC 4 cut(s) 473, 517, 971, 1017
BsmI GAATGC 1 cut(s) 759
BsnI GGCC 1 cut(s) 770
Bsp1286I GDGCHC 2 cut(s) 653, 694
Bsp143I GATC 2 cut(s) 22, 405
Bsp19I CCATGG 1 cut(s) 771
BspACI CCGC 4 cut(s) 93, 107, 334, 833
BspANI GGCC 1 cut(s) 770
BspCNI CTCAG 2 cut(s) 299, 451
BspDI ATCGAT 1 cut(s) 38
BspLI GGNNCC 2 cut(s) 24, 91
BspMAI CTGCAG 2 cut(s) 163, 850
BspPI GGATC 3 cut(s) 17, 30, 413
BspT107I GGYRCC 1 cut(s) 89
BsrI ACTGG 3 cut(s) 271, 641, 685
BssECI CCNNGG 5 cut(s) 248, 519, 771, 785, 939
BssMI GATC 2 cut(s) 22, 405
BssNI GRCGYC 3 cut(s) 90, 630, 886
BssSI CACGAG 1 cut(s) 181
BssT1I CCWWGG 4 cut(s) 519, 771, 785, 939
Bst2BI CACGAG 1 cut(s) 181
Bst2UI CCWGG 3 cut(s) 249, 338, 606
Bst4CI ACNGT 3 cut(s) 400, 481, 1083
BstACI GRCGYC 3 cut(s) 90, 630, 886
BstAPI GCANNNNNTGC 2 cut(s) 158, 845
BstC8I GCNNGC 3 cut(s) 514, 570, 793
BstDEI CTNAG 2 cut(s) 286, 459
BstDSI CCRYGG 1 cut(s) 771
BstF5I GGATG 6 cut(s) 258, 570, 675, 712, 972, 981
BstH2I RGCGCY 1 cut(s) 93
BstHHI GCGC 1 cut(s) 92
BstKTI GATC 2 cut(s) 25, 408
BstMAI GTCTC 1 cut(s) 471
BstMBI GATC 2 cut(s) 22, 405
BstMWI GCNNNNNNNGC 7 cut(s) 80, 89, 158, 698, 815, 845, 851
BstNI CCWGG 3 cut(s) 249, 338, 606
BstNSI RCATGY 1 cut(s) 415
BstSCI CCNGG 4 cut(s) 247, 336, 604, 749
BstSFI CTRYAG 3 cut(s) 159, 846, 1020
BstV1I GCAGC 5 cut(s) 145, 805, 832, 860, 863
BstV2I GAAGAC 1 cut(s) 623
BstX2I RGATCY 2 cut(s) 22, 405
BstYI RGATCY 2 cut(s) 22, 405
Bsu15I ATCGAT 1 cut(s) 38
BsuRI GGCC 1 cut(s) 770
BsuTUI ATCGAT 1 cut(s) 38
BtgI CCRYGG 1 cut(s) 771
BtsCI GGATG 6 cut(s) 258, 570, 675, 712, 972, 981
BtsIMutI CAGTG 1 cut(s) 648
Cac8I GCNNGC 3 cut(s) 514, 570, 793
CaiI CAGNNNCTG 1 cut(s) 845
CfoI GCGC 1 cut(s) 92
Cfr13I GGNCC 1 cut(s) 1013
ClaI ATCGAT 1 cut(s) 38
CseI GACGC 1 cut(s) 875
Csp6I GTAC 4 cut(s) 221, 298, 366, 1057
CviAII CATG 4 cut(s) 224, 412, 772, 916
CviQI GTAC 4 cut(s) 221, 298, 366, 1057
DdeI CTNAG 2 cut(s) 286, 459
DinI GGCGCC 1 cut(s) 91
DpnI GATC 2 cut(s) 24, 407
DpnII GATC 2 cut(s) 22, 405
DrdI GACNNNNNNGTC 1 cut(s) 463
DriI GACNNNNNGTC 1 cut(s) 885
DseDI GACNNNNNNGTC 1 cut(s) 463
EaeI YGGCCR 1 cut(s) 768
Eam1105I GACNNNNNGTC 1 cut(s) 885
EciI GGCGGA 1 cut(s) 323
Eco130I CCWWGG 4 cut(s) 519, 771, 785, 939
Eco24I GRGCYC 1 cut(s) 653
Eco47I GGWCC 1 cut(s) 1013
EcoRI GAATTC 1 cut(s) 208
EcoRII CCWGG 3 cut(s) 247, 336, 604
EcoT14I CCWWGG 4 cut(s) 519, 771, 785, 939
EcoT38I GRGCYC 1 cut(s) 653
EgeI GGCGCC 1 cut(s) 91
EheI GGCGCC 1 cut(s) 91
ErhI CCWWGG 4 cut(s) 519, 771, 785, 939
FaeI CATG 4 cut(s) 227, 415, 775, 919
FalI AAGNNNNNCTT 2 cut(s) 367, 399
FaqI GGGAC 4 cut(s) 473, 517, 971, 1017
FatI CATG 4 cut(s) 223, 411, 771, 915
FauI CCCGC 1 cut(s) 826
Fnu4HI GCNGC 6 cut(s) 93, 159, 819, 846, 849, 852
FokI GGATG 6 cut(s) 265, 577, 682, 719, 979, 988
FriOI GRGCYC 1 cut(s) 653
Fsp4HI GCNGC 6 cut(s) 93, 159, 819, 846, 849, 852
FspBI CTAG 6 cut(s) 351, 494, 702, 866, 882, 996
GlaI GCGC 1 cut(s) 91
GluI GCNGC 6 cut(s) 93, 159, 819, 846, 849, 852
GsaI CCCAGC 1 cut(s) 504
GsuI CTGGAG 1 cut(s) 231
HaeII RGCGCY 1 cut(s) 93
HaeIII GGCC 1 cut(s) 770
HapII CCGG 2 cut(s) 84, 751
HgaI GACGC 1 cut(s) 875
HhaI GCGC 1 cut(s) 92
Hin1I GRCGYC 3 cut(s) 90, 630, 886
Hin1II CATG 4 cut(s) 227, 415, 775, 919
Hin6I GCGC 1 cut(s) 90
HinP1I GCGC 1 cut(s) 90
HincII GTYRAC 1 cut(s) 628
HindII GTYRAC 1 cut(s) 628
HinfI GANTC 1 cut(s) 40
HpaII CCGG 2 cut(s) 84, 751
HphI GGTGA 1 cut(s) 788
Hpy166II GTNNAC 2 cut(s) 453, 628
Hpy188I TCNGA 3 cut(s) 45, 289, 396
Hpy188III TCNNGA 4 cut(s) 125, 311, 454, 866
Hpy8I GTNNAC 2 cut(s) 453, 628
Hpy99I CGWCG 1 cut(s) 635
HpyAV CCTTC 2 cut(s) 335, 640
HpyCH4III ACNGT 3 cut(s) 400, 481, 1083
HpyCH4IV ACGT 2 cut(s) 215, 630
HpyCH4V TGCA 9 cut(s) 161, 275, 568, 722, 809, 839, 848, 875, 1066
HpyF10VI GCNNNNNNNGC 7 cut(s) 80, 89, 158, 698, 815, 845, 851
HpyF3I CTNAG 2 cut(s) 286, 459
HpySE526I ACGT 2 cut(s) 215, 630
Hsp92I GRCGYC 3 cut(s) 90, 630, 886
Hsp92II CATG 4 cut(s) 227, 415, 775, 919
HspAI GCGC 1 cut(s) 90
KasI GGCGCC 1 cut(s) 89
Kzo9I GATC 2 cut(s) 22, 405
LmnI GCTCC 3 cut(s) 250, 521, 986
Lsp1109I GCAGC 5 cut(s) 145, 805, 832, 860, 863
LweI GCATC 2 cut(s) 284, 555
MaeI CTAG 6 cut(s) 351, 494, 702, 866, 882, 996
MaeII ACGT 2 cut(s) 215, 630
MaeIII GTNAC 1 cut(s) 536
MalI GATC 2 cut(s) 24, 407
MboI GATC 2 cut(s) 22, 405
MboII GAAGA 4 cut(s) 20, 628, 791, 910
MfeI CAATTG 1 cut(s) 17
MflI RGATCY 2 cut(s) 22, 405
MhlI GDGCHC 2 cut(s) 653, 694
MluCI AATT 7 cut(s) 17, 52, 59, 208, 238, 261, 327
Mly113I GGCGCC 1 cut(s) 90
MmeI TCCRAC 1 cut(s) 419
MnlI CCTC 9 cut(s) 80, 132, 356, 439, 501, 873, 948, 956, 965
MroXI GAANNNNTTC 1 cut(s) 238
MseI TTAA 3 cut(s) 135, 380, 576
MslI CAYNNNNRTG 2 cut(s) 280, 920
MspI CCGG 2 cut(s) 84, 751
MspR9I CCNGG 4 cut(s) 249, 338, 606, 751
MunI CAATTG 1 cut(s) 17
Mva1269I GAATGC 1 cut(s) 759
MvaI CCWGG 3 cut(s) 249, 338, 606
MwoI GCNNNNNNNGC 7 cut(s) 80, 89, 158, 698, 815, 845, 851
NarI GGCGCC 1 cut(s) 90
NciI CCSGG 1 cut(s) 751
NcoI CCATGG 1 cut(s) 771
NdeII GATC 2 cut(s) 22, 405
NlaIII CATG 4 cut(s) 227, 415, 775, 919
NlaIV GGNNCC 2 cut(s) 24, 91
NspI RCATGY 1 cut(s) 415
PcsI WCGNNNNNNNCGW 1 cut(s) 212
PctI GAATGC 1 cut(s) 759
PdmI GAANNNNTTC 1 cut(s) 238
PfeI GAWTC 1 cut(s) 40
PflFI GACNNNGTC 1 cut(s) 632
PkrI GCNGC 6 cut(s) 94, 160, 820, 847, 850, 853
PluTI GGCGCC 1 cut(s) 93
Psp6I CCWGG 3 cut(s) 247, 336, 604
PspFI CCCAGC 1 cut(s) 500
PspGI CCWGG 3 cut(s) 247, 336, 604
PspN4I GGNNCC 2 cut(s) 24, 91
PspPI GGNCC 1 cut(s) 1013
PstI CTGCAG 2 cut(s) 163, 850
PstNI CAGNNNCTG 1 cut(s) 845
PsuI RGATCY 2 cut(s) 22, 405
PsyI GACNNNGTC 1 cut(s) 632
RsaI GTAC 4 cut(s) 222, 299, 367, 1058
RsaNI GTAC 4 cut(s) 221, 298, 366, 1057
RseI CAYNNNNRTG 2 cut(s) 280, 920
SaqAI TTAA 3 cut(s) 135, 380, 576
SatI GCNGC 6 cut(s) 93, 159, 819, 846, 849, 852
Sau3AI GATC 2 cut(s) 22, 405
Sau96I GGNCC 1 cut(s) 1013
ScrFI CCNGG 4 cut(s) 249, 338, 606, 751
SduI GDGCHC 2 cut(s) 653, 694
SetI ASST 6 cut(s) 218, 367, 633, 808, 856, 941
SfaNI GCATC 2 cut(s) 284, 555
SfcI CTRYAG 3 cut(s) 159, 846, 1020
SfoI GGCGCC 1 cut(s) 91
SinI GGWCC 1 cut(s) 1013
SmiMI CAYNNNNRTG 2 cut(s) 280, 920
SmlI CTYRAG 1 cut(s) 740
SmoI CTYRAG 1 cut(s) 740
Sse9I AATT 7 cut(s) 17, 52, 59, 208, 238, 261, 327
SsiI CCGC 4 cut(s) 93, 107, 334, 833
SspDI GGCGCC 1 cut(s) 89
SspMI CTAG 6 cut(s) 351, 494, 702, 866, 882, 996
StyD4I CCNGG 4 cut(s) 247, 336, 604, 749
StyI CCWWGG 4 cut(s) 519, 771, 785, 939
TaaI ACNGT 3 cut(s) 400, 481, 1083
TaiI ACGT 2 cut(s) 218, 633
TaqI TCGA 5 cut(s) 32, 38, 126, 201, 734
TasI AATT 7 cut(s) 17, 52, 59, 208, 238, 261, 327
TatI WGTACW 1 cut(s) 297
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 1 cut(s) 40
Tru1I TTAA 3 cut(s) 135, 380, 576
Tru9I TTAA 3 cut(s) 135, 380, 576
TscAI CASTG 1 cut(s) 648
TseI GCWGC 5 cut(s) 158, 818, 845, 848, 851
TspGWI ACGGA 4 cut(s) 159, 577, 975, 1074
TspRI CASTG 1 cut(s) 648
Tth111I GACNNNGTC 1 cut(s) 632
VpaK11BI GGWCC 1 cut(s) 1013
XapI RAATTY 3 cut(s) 52, 59, 208
XbaI TCTAGA 1 cut(s) 865
XceI RCATGY 1 cut(s) 415
XmnI GAANNNNTTC 1 cut(s) 238
XspI CTAG 6 cut(s) 351, 494, 702, 866, 882, 996
ZraI GACGTC 1 cut(s) 631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.