Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005477

Physical Location & Seq

Genomic Coordinates Forward (+)

19631207 .. 19636978

Gene Structure 5772 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G47980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3297 bp

ATGGAAGACAGTCCTCAAGGCCTTAAAAGGAGTAGAGATCCGGATCAGGATCAGGATGACGACAGCGGCGAGGCTGGCAAGGCCGACGGAAGCGGCGGAGAGAATCAGGAGCGCAGCAGCGACCAGATTGAGCTCGATGACGACGATTTCCAGGAAACCCGTCCCAAGCCCAAGCGTAGTCGCACCCATCCTCCTCAACAGAATCTCATTGAGGTTGTCAAAGGCAACGGGGATCTTATTTCTAAAGCCGTCAAGATTTGGGTTGAAAGATATGAAGACTCTCCCAGCCTTGCTACCACTGAGCTCTTGTCAATGCTCTTTCAGGCTTGCGGTGCTAAATACTCCATCAAGGATGATCTGCTTGATGAGACTGATGTCGATGATGTTGTCGTTTCCCTTGTTAATCTTGCTAGAGCCGGGGAACTCGAAGATTATCAGAGTTCCAGAAAGAAGGAACTCAAGAACTTCAAAGAAAATCTTGTTTCCTTCTGGAATAATCTCATTATCGAGTGCCAAAACGGACCATTGTTTGATAGAGTCTTGTTCGACAAGTGCATGGACTACATTATCGCACTGTCATGTACTCCACCCAGAGTTTACCGTCAAACTGCCACGCTAATGGGCCTCCAACTAGTCACATCTTTCATTTCTGTTGCAAACACACTCGGTTCACAGCGAGAAACCACCCAAAGACAATTGAATGCTGAAAGCAAGAAGAGAGCTGACGGCCCTCGTGTGGACTCCCTCAACAAAAGGTTGTCTGTTACTCATGAACAGATAACTACACTGGAGGACATGATGCGCAAAATTTTCACTGGGTTGTTTGTACACCGATATCGAGATATTGATAACGATATTCGGATGTCATGCATTCAGTCTCTGGGCATTTGGATTTTGTCTTATCCTTCTCTTTTCTTACAAGATCTGTATTTAAAATATCTTGGATGGACGCTTAATGACAAAAATGCTGGAGTGAGGAAAGCTTCTCTATTGGCATTGCAAAAACTTTATGAAATGGATGAAAACGTCCCCACTCTTGGTCTTTTCACTCAGAGATTTTCCAATCGAATGATCGAGATGGCTGATGATGTTGATATGTCTGCAGCTGTATGTGCTATAGGGCTTGTAAAGCAACTGCTAAGACACCAGCTGATACCTGATGATGACCTAGGCCCTTTGTACGATTTGCTTATTGATCAACCTCAAGAAATCAGACGTGCGATAGGAGAGTTAGTGTATGACCACTTGATCGCACAGAAGTTTAACAGTTCTCCGTCCAGTCTTACAGGTCATGATGATTCTTCCTCTGAGATCCATATCTTCAGAATGTTACAAATATTACGGGAGTTCTCCACAGATCCGATTTTATGTGTATATGTAATTGATGATGTTTGGGAGTACATGAAGGCCATGAAGGACTGGAAGTGTATCATCTCTATGCTTTTGGATCAGAATCCTCGAACTGGGTCTACTACTGACGAGGACTCGACAAACTTGATCAGACTTCTGTTTGTGTCAATCAGAAAGGCTGTCGGGGAGAAGATAATTCCTTCAACGGATAATCGAAAGCAGTATCACAGTAAAGCTCAGCGAGAAATATTTGAAAACAACAGGAAAGACATAACTGTGGCCATGATGAAGAATTATCCACAGCTTCTACGTAAATTCATGGCTGACAAAGCAAAAGTGTCATCTTTGGTCGAGATTATTATATTTATGAAACTTGAGCTCTATTCTCTTAAAAGACAGGAGCAGAGTTTTAAAGCTGCCGTCCGACTCATAAAGGATGCTTTTTTCAAACACGGGGAGAAGGAAGCACTAAGATCTTGCGTCAAGGCTATAACATTTTGTGCGTCAGAAAGTAAAGGGGAGCTTCAAGATTTTTCACGTGGGAAGCTTAAAGATCTTGAAGATGAGCTTTTAGATAAGATCACTTCTGCAATTAGAGAAGTCAAGGATGGAAATGATGAATACTCCCTCCTAGTAAATCTGAAAAGGTTGTATGAGCTTCAATTGTCAAAGCCTGTGCTTGTTGAGAGCATGTTCGATGAGATTGCTTTGACGCTCCATAATTTCAGAAATTTGGACGAAGAGGTTATCTGTTTCCTGCTTCTGAATATGCACATGTATTTGGCGTGGTATCTGCACTCCATCATAAATTGTGAAGCTATCTCTGAAGCTTCCTTATCTTCCCTTATATCAAAGCGTGATACCCTGTTTGAGGAGCTTTCGTACTTCCTGAATGGAATTGAGGAATCGAAGAAATATGGTAATCAGCTATCGAACAGGATCTGTGCTATACTCGCCGAAACATGGTGTTTGTTTAGAAAGTCAAATTATGACTCGGGTAAACTTGAAAGATTAGGATACTGTCCCGACAGTGTCTTTCTTGAGAAATTTTGGAAACTCTGTGCAGAAATGTTTAACACTTCAGATGAGACCGATGAGGAGGATGAAAATAAGGAATACATTGAAGAGACAAACAGAGATGTTTCAGTCATTGCTGCCTGCAAGTTGGTTGCTAGTGATGTGGTTCCAAAGGATTATCTAGGACCAGAGATCATATCGCATCTTGGTATGCATGGACCTGGTGTAACAGGCATCATAAAGAATCTTATTACATTCTTAAGGAAAAAAGAAGATGACATCTCTAATATCTATCTCGAATCCTTGAAACGGGCCTATCACCGGTATTCAAGTGAACTTTCTAGTGGCCGTGAAGAATCCAGAGTAGATAAATGTCTTGAAGAGTGGCGGGAGCTTGCAGGTGGGCTCTCAGGAATGTATATCGGGGCTGCGCGCAACAAATACAGATTGGAGATATTGAGTGTGGTGAAGGAAGGTGTTGAGTTTGCTTTTAGGGACGCCCCAAAGCAACTGTTGTTTCTGGAAGTTGCTATCCTTCCATTTGCAACCAGACTCTCAGTGTCTGACATCATTGACATTAAGAAGGACGTTCAGGGGCGTATAGTGCATGTTAATACAGACGAAGATCCCAGTGGATGGCGTCCTTGCTTCACCTTCTTGGAAACCTTGGAGGAGAAATGCTTGAAAAACGAGGATTTACAAGACGACAAGGAAGCAGCAAATGTAAGACGCAGGGGACGGCCAAGAAAACGTCCGGAAACAGAGCGAAAGAGACTGTTTGATGAGCAAAGTGGAAGCGATGAGGATGAGTCTATTAGTGGCGGGTCAGACAGAGAAGATAAGCTCGACGAGGACGCTCCTCTAATCGAGACAATTAGATCGGCTGCCAGACGGAAAGCGCTCAAGGGTGAACGGTCCAAGGGACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000819 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0048285 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051754 GO:0061982 GO:0061983 GO:0070192 GO:0070601 GO:0071840 GO:0098813 GO:0140013 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

STAG

Protein Analysis

1098

Amino Acids

125.76

Weight (kDa)

5.24

Isoelectric Point (pI)

46.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STAG	PF08514	145 - 251	1.7e-28	STAG domain
SCD	PF21581	280 - 353	9.1e-29	Stromalin conservative domain
HEAT_SCC3-SA	PF24571	459 - 713	3.3e-72	Cohesin subunit SCC3/SA, HEAT-repeats domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0005477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47980
fragaria_vesca	FvH4_2g24570 FvH4_2g24570 FvH4_2g24570 FvH4_2g24570 FvH4_2g24570 FvH4_2g24570
malus_domestica	MD11G1296700.v1.1
prunus_persica	Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1
pyrus_communis	pycom11g26100
rosa_chinensis	RchiOBHm_Chr6g0292391
rosa_laevigata	RLG00000012032
rosa_multiflora	Rmu_sc0012226.1_g000001 Rmu_sc0023540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026580 Rroxscaffold_7G00175100
rosa_rugosa	Rorug06G0226100 Rorug06G0226200 Rorug06G0226300
rosa_samantha	Rh6AG339600 Rh6BG346800 Rh6CG353600 Rh6DG339600
rosa_wichuraiana	Rw6G029550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2756
Acc16I	TGCGCA	1 cut(s)	803
Acc36I	ACCTGC	1 cut(s)	2756
AccB7I	CCANNNNNTGG	1 cut(s)	3003
AccI	GTMKAC	1 cut(s)	1469
AccII	CGCG	1 cut(s)	2800
AccIII	TCCGGA	2 cut(s)	40, 3121
AciI	CCGC	6 cut(s)	66, 93, 96, 330, 2755, 3189
AclWI	GGATC	9 cut(s)	32, 51, 57, 240, 1306, 1352, 1455, 2297, 2987
AcoI	YGGCCR	3 cut(s)	1629, 2713, 3107
AcsI	RAATTY	4 cut(s)	807, 1664, 2080, 2396
AcuI	CTGAAG	3 cut(s)	1306, 2196, 2415
AcvI	CACGTG	1 cut(s)	1889
AcyI	GRCGYC	2 cut(s)	2865, 3007
AfaI	GTAC	5 cut(s)	583, 828, 1181, 1400, 2234
AfeI	AGCGCT	1 cut(s)	3267
AfiI	CCNNNNNNNGG	8 cut(s)	736, 1037, 1463, 2221, 2313, 2676, 2688, 3003
AflII	CTTAAG	1 cut(s)	2626
AflIII	ACRYGT	1 cut(s)	2124
AgeI	ACCGGT	1 cut(s)	2688
AhlI	ACTAGT	1 cut(s)	631
AjiI	CACGTC	1 cut(s)	1217
AjnI	CCWGG	2 cut(s)	150, 2587
Alw21I	GWGCWC	3 cut(s)	135, 306, 1731
Alw26I	GTCTC	6 cut(s)	362, 882, 2432, 2471, 3133, 3230
AlwI	GGATC	9 cut(s)	32, 51, 57, 240, 1306, 1352, 1455, 2297, 2987
AlwNI	CAGNNNCTG	3 cut(s)	880, 2292, 2930
Ama87I	CYCGRG	1 cut(s)	2344
Aor13HI	TCCGGA	2 cut(s)	40, 3121
Aor51HI	AGCGCT	1 cut(s)	3267
ApeKI	GCWGC	8 cut(s)	114, 117, 1103, 1766, 2504, 2795, 3083, 3251
ApoI	RAATTY	4 cut(s)	807, 1664, 2080, 2396
AsiGI	ACCGGT	1 cut(s)	2688
AspA2I	CCTAGG	1 cut(s)	1168
AspLEI	GCGC	5 cut(s)	114, 804, 2800, 2802, 3268
AspS9I	GGNCC	8 cut(s)	521, 622, 728, 1172, 2552, 2585, 2679, 3282
AsuC2I	CCSGG	1 cut(s)	418
AsuHPI	GGTGA	4 cut(s)	2678, 2845, 3010, 3287
AvaI	CYCGRG	1 cut(s)	2344
AvaII	GGWCC	4 cut(s)	521, 2552, 2585, 3282
AvrII	CCTAGG	1 cut(s)	1168
BalI	TGGCCA	1 cut(s)	1631
BanII	GRGCYC	4 cut(s)	135, 306, 1731, 2775
BauI	CACGAG	1 cut(s)	732
BbrPI	CACGTG	1 cut(s)	1889
BbsI	GAAGAC	2 cut(s)	12, 282
Bbv12I	GWGCWC	3 cut(s)	135, 306, 1731
BbvI	GCAGC	8 cut(s)	126, 129, 1115, 1753, 2491, 2782, 3095, 3238
BccI	CCATC	7 cut(s)	195, 353, 939, 1072, 1952, 2159, 2997
BceAI	ACGGC	5 cut(s)	233, 742, 1754, 2700, 3122
BcgI	CGANNNNNNTGC	2 cut(s)	2036, 2070
BciT130I	CCWGG	2 cut(s)	152, 2589
BciVI	GTATCC	1 cut(s)	2360
BclI	TGATCA	2 cut(s)	1195, 1497
BcnI	CCSGG	1 cut(s)	418
BcoDI	GTCTC	6 cut(s)	362, 882, 2432, 2471, 3133, 3230
BcuI	ACTAGT	1 cut(s)	631
BfaI	CTAG	7 cut(s)	411, 632, 1169, 1982, 2523, 2549, 2709
BfmI	CTRYAG	2 cut(s)	1101, 1116
BfoI	RGCGCY	1 cut(s)	3269
BfrI	CTTAAG	1 cut(s)	2626
BfuAI	ACCTGC	1 cut(s)	2756
BfuI	GTATCC	1 cut(s)	2360
BglII	AGATCT	3 cut(s)	922, 1823, 1903
BlnI	CCTAGG	1 cut(s)	1168
BlpI	GCTNAGC	1 cut(s)	1587
Bme1390I	CCNGG	3 cut(s)	152, 418, 2589
Bme18I	GGWCC	4 cut(s)	521, 2552, 2585, 3282
BmeT110I	CYCGRG	1 cut(s)	2344
BmgBI	CACGTC	1 cut(s)	1217
BmgT120I	GGNCC	8 cut(s)	521, 622, 728, 1172, 2552, 2585, 2679, 3282
BmiI	GGNNCC	1 cut(s)	2535
BmrFI	CCNGG	3 cut(s)	152, 418, 2589
BmrI	ACTGGG	3 cut(s)	825, 1473, 2991
BmsI	GCATC	4 cut(s)	789, 1777, 2578, 2610
BmuI	ACTGGG	3 cut(s)	825, 1473, 2991
BoxI	GACNNNNGTC	1 cut(s)	374
BpiI	GAAGAC	2 cut(s)	12, 282
BpmI	CTGGAG	2 cut(s)	809, 990
Bpu1102I	GCTNAGC	1 cut(s)	1587
BpuEI	CTTGAG	5 cut(s)	443, 1188, 1745, 2411, 3254
BpuMI	CCSGG	1 cut(s)	418
BsaAI	YACGTR	2 cut(s)	1661, 1889
BsaBI	GATNNNNATC	4 cut(s)	42, 48, 1316, 1452
BsaHI	GRCGYC	2 cut(s)	2865, 3007
BsaI	GGTCTC	1 cut(s)	2432
BsaJI	CCNNGG	4 cut(s)	417, 1168, 3033, 3285
BsaWI	WCCGGW	3 cut(s)	40, 2688, 3121
BsaXI	ACNNNNNCTCC	6 cut(s)	175, 205, 1218, 1248, 2216, 2246
Bsc4I	CCNNNNNNNGG	8 cut(s)	736, 1037, 1463, 2221, 2313, 2676, 2688, 3003
Bse118I	RCCGGY	1 cut(s)	2688
Bse1I	ACTGG	6 cut(s)	792, 820, 1278, 1424, 1468, 2997
Bse3DI	GCAATG	2 cut(s)	995, 2499
Bse8I	GATNNNNATC	4 cut(s)	42, 48, 1316, 1452
BseAI	TCCGGA	2 cut(s)	40, 3121
BseBI	CCWGG	2 cut(s)	152, 2589
BseDI	CCNNGG	4 cut(s)	417, 1168, 3033, 3285
BseJI	GATNNNNATC	4 cut(s)	42, 48, 1316, 1452
BseLI	CCNNNNNNNGG	8 cut(s)	736, 1037, 1463, 2221, 2313, 2676, 2688, 3003
BseMI	GCAATG	2 cut(s)	995, 2499
BseMII	CTCAG	6 cut(s)	291, 1064, 1299, 1601, 2790, 2937
BseNI	ACTGG	6 cut(s)	792, 820, 1278, 1424, 1468, 2997
BsePI	GCGCGC	1 cut(s)	2798
BseRI	GAGGAG	5 cut(s)	183, 2237, 2462, 3053, 3216
BseXI	GCAGC	8 cut(s)	126, 129, 1115, 1753, 2491, 2782, 3095, 3238
BseYI	CCCAGC	1 cut(s)	284
BsgI	GTGCAG	2 cut(s)	2129, 2433
Bsh1236I	CGCG	1 cut(s)	2800
BshTI	ACCGGT	1 cut(s)	2688
BsiHKAI	GWGCWC	3 cut(s)	135, 306, 1731
BsiHKCI	CYCGRG	1 cut(s)	2344
BsiSI	CCGG	4 cut(s)	41, 417, 2689, 3122
BslFI	GGGAC	5 cut(s)	147, 1013, 2358, 2876, 3117
BslI	CCNNNNNNNGG	8 cut(s)	736, 1037, 1463, 2221, 2313, 2676, 2688, 3003
BsmAI	GTCTC	6 cut(s)	362, 882, 2432, 2471, 3133, 3230
BsmFI	GGGAC	5 cut(s)	147, 1013, 2358, 2876, 3117
BsmI	GAATGC	2 cut(s)	706, 870
Bso31I	GGTCTC	1 cut(s)	2432
BsoBI	CYCGRG	1 cut(s)	2344
Bsp1286I	GDGCHC	4 cut(s)	135, 306, 1731, 2775
Bsp13I	TCCGGA	2 cut(s)	40, 3121
Bsp1407I	TGTACA	1 cut(s)	826
Bsp1720I	GCTNAGC	1 cut(s)	1587
BspACI	CCGC	6 cut(s)	66, 93, 96, 330, 2755, 3189
BspCNI	CTCAG	6 cut(s)	292, 1063, 1300, 1600, 2789, 2936
BspEI	TCCGGA	2 cut(s)	40, 3121
BspFNI	CGCG	1 cut(s)	2800
BspHI	TCATGA	2 cut(s)	769, 1291
BspLI	GGNNCC	1 cut(s)	2535
BspMAI	CTGCAG	1 cut(s)	1105
BspMI	ACCTGC	1 cut(s)	2756
BspPI	GGATC	9 cut(s)	32, 51, 57, 240, 1306, 1352, 1455, 2297, 2987
BspTI	CTTAAG	1 cut(s)	2626
BspTNI	GGTCTC	1 cut(s)	2432
BsrDI	GCAATG	2 cut(s)	995, 2499
BsrFI	RCCGGY	1 cut(s)	2688
BsrGI	TGTACA	1 cut(s)	826
BsrI	ACTGG	6 cut(s)	792, 820, 1278, 1424, 1468, 2997
BssAI	RCCGGY	1 cut(s)	2688
BssECI	CCNNGG	4 cut(s)	417, 1168, 3033, 3285
BssHII	GCGCGC	1 cut(s)	2798
BssNI	GRCGYC	2 cut(s)	2865, 3007
BssSI	CACGAG	1 cut(s)	732
BssT1I	CCWWGG	3 cut(s)	1168, 3033, 3285
Bst2BI	CACGAG	1 cut(s)	732
Bst2UI	CCWGG	2 cut(s)	152, 2589
Bst6I	CTCTTC	4 cut(s)	710, 2085, 2469, 2742
BstACI	GRCGYC	2 cut(s)	2865, 3007
BstAFI	CTTAAG	1 cut(s)	2626
BstAUI	TGTACA	1 cut(s)	826
BstBAI	YACGTR	2 cut(s)	1661, 1889
BstC8I	GCNNGC	5 cut(s)	76, 328, 2509, 2763, 2800
BstDEI	CTNAG	8 cut(s)	300, 1050, 1139, 1308, 1587, 1820, 2776, 2923
BstENI	CCTNNNNNAGG	1 cut(s)	2219
BstFNI	CGCG	1 cut(s)	2800
BstH2I	RGCGCY	1 cut(s)	3269
BstHHI	GCGC	5 cut(s)	114, 804, 2800, 2802, 3268
BstMAI	GTCTC	6 cut(s)	362, 882, 2432, 2471, 3133, 3230
BstMWI	GCNNNNNNNGC	8 cut(s)	75, 80, 332, 1112, 1129, 1679, 2303, 2971
BstNI	CCWGG	2 cut(s)	152, 2589
BstNSI	RCATGY	3 cut(s)	2044, 2128, 2978
BstPAI	GACNNNNGTC	1 cut(s)	374
BstSCI	CCNGG	3 cut(s)	150, 416, 2587
BstSFI	CTRYAG	2 cut(s)	1101, 1116
BstSNI	TACGTA	1 cut(s)	1661
BstUI	CGCG	1 cut(s)	2800
BstV1I	GCAGC	8 cut(s)	126, 129, 1115, 1753, 2491, 2782, 3095, 3238
BstV2I	GAAGAC	2 cut(s)	12, 282
BstX2I	RGATCY	9 cut(s)	37, 232, 922, 1311, 1357, 1823, 1903, 2289, 2992
BstXI	CCANNNNNNTGG	1 cut(s)	619
BstYI	RGATCY	9 cut(s)	37, 232, 922, 1311, 1357, 1823, 1903, 2289, 2992
BsuI	GTATCC	1 cut(s)	2360
BtgZI	GCGATG	1 cut(s)	3180
BtrI	CACGTC	1 cut(s)	1217
BtsIMutI	CAGTG	8 cut(s)	297, 572, 785, 813, 2386, 2931, 3004, 3292
BveI	ACCTGC	1 cut(s)	2756
Cac8I	GCNNGC	5 cut(s)	76, 328, 2509, 2763, 2800
CaiI	CAGNNNCTG	3 cut(s)	880, 2292, 2930
CciI	TCATGA	2 cut(s)	769, 1291
CfoI	GCGC	5 cut(s)	114, 804, 2800, 2802, 3268
Cfr10I	RCCGGY	1 cut(s)	2688
Cfr13I	GGNCC	8 cut(s)	521, 622, 728, 1172, 2552, 2585, 2679, 3282
CseI	GACGC	8 cut(s)	958, 1819, 1842, 2071, 2873, 2996, 3105, 3230
CsiI	ACCWGGT	1 cut(s)	2587
Csp6I	GTAC	5 cut(s)	582, 827, 1180, 1399, 2233
CspAI	ACCGGT	1 cut(s)	2688
CviQI	GTAC	5 cut(s)	582, 827, 1180, 1399, 2233
DdeI	CTNAG	8 cut(s)	300, 1050, 1139, 1308, 1587, 1820, 2776, 2923
DraI	TTTAAA	2 cut(s)	933, 1762
EaeI	YGGCCR	3 cut(s)	1629, 2713, 3107
Eam1104I	CTCTTC	4 cut(s)	710, 2085, 2469, 2742
EarI	CTCTTC	4 cut(s)	710, 2085, 2469, 2742
EciI	GGCGGA	1 cut(s)	111
Ecl136II	GAGCTC	3 cut(s)	133, 304, 1729
Eco105I	TACGTA	1 cut(s)	1661
Eco130I	CCWWGG	3 cut(s)	1168, 3033, 3285
Eco147I	AGGCCT	1 cut(s)	21
Eco24I	GRGCYC	4 cut(s)	135, 306, 1731, 2775
Eco31I	GGTCTC	1 cut(s)	2432
Eco32I	GATATC	1 cut(s)	836
Eco47I	GGWCC	4 cut(s)	521, 2552, 2585, 3282
Eco47III	AGCGCT	1 cut(s)	3267
Eco53kI	GAGCTC	3 cut(s)	133, 304, 1729
Eco57I	CTGAAG	3 cut(s)	1306, 2196, 2415
Eco72I	CACGTG	1 cut(s)	1889
Eco88I	CYCGRG	1 cut(s)	2344
EcoICRI	GAGCTC	3 cut(s)	133, 304, 1729
EcoNI	CCTNNNNNAGG	1 cut(s)	2219
EcoO109I	RGGNCCY	1 cut(s)	1172
EcoRII	CCWGG	2 cut(s)	150, 2587
EcoRV	GATATC	1 cut(s)	836
EcoT14I	CCWWGG	3 cut(s)	1168, 3033, 3285
EcoT22I	ATGCAT	2 cut(s)	872, 2583
EcoT38I	GRGCYC	4 cut(s)	135, 306, 1731, 2775
ErhI	CCWWGG	3 cut(s)	1168, 3033, 3285
FalI	AAGNNNNNCTT	6 cut(s)	462, 494, 1857, 1889, 1902, 1934
FaqI	GGGAC	5 cut(s)	147, 1013, 2358, 2876, 3117
FauI	CCCGC	2 cut(s)	2748, 3182
FbaI	TGATCA	2 cut(s)	1195, 1497
FblI	GTMKAC	1 cut(s)	1469
FriOI	GRGCYC	4 cut(s)	135, 306, 1731, 2775
FspBI	CTAG	7 cut(s)	411, 632, 1169, 1982, 2523, 2549, 2709
FspI	TGCGCA	1 cut(s)	803
GlaI	GCGC	5 cut(s)	113, 803, 2799, 2801, 3267
GsaI	CCCAGC	1 cut(s)	288
GsuI	CTGGAG	2 cut(s)	809, 990
HaeII	RGCGCY	1 cut(s)	3269
HapII	CCGG	4 cut(s)	41, 417, 2689, 3122
HgaI	GACGC	8 cut(s)	958, 1819, 1842, 2071, 2873, 2996, 3105, 3230
HhaI	GCGC	5 cut(s)	114, 804, 2800, 2802, 3268
Hin1I	GRCGYC	2 cut(s)	2865, 3007
Hin6I	GCGC	5 cut(s)	112, 802, 2798, 2800, 3266
HinP1I	GCGC	5 cut(s)	112, 802, 2798, 2800, 3266
HindIII	AAGCTT	3 cut(s)	981, 1895, 2178
HpaII	CCGG	4 cut(s)	41, 417, 2689, 3122
HphI	GGTGA	4 cut(s)	2678, 2845, 3010, 3287
Hpy166II	GTNNAC	8 cut(s)	598, 671, 739, 829, 1470, 2351, 2702, 3278
Hpy8I	GTNNAC	8 cut(s)	598, 671, 739, 829, 1470, 2351, 2702, 3278
Hpy99I	CGWCG	3 cut(s)	89, 146, 3218
HpyCH4IV	ACGT	6 cut(s)	1026, 1216, 1660, 1888, 2955, 3118
HpyF10VI	GCNNNNNNNGC	8 cut(s)	75, 80, 332, 1112, 1129, 1679, 2303, 2971
HpyF3I	CTNAG	8 cut(s)	300, 1050, 1139, 1308, 1587, 1820, 2776, 2923
HpySE526I	ACGT	6 cut(s)	1026, 1216, 1660, 1888, 2955, 3118
Hsp92I	GRCGYC	2 cut(s)	2865, 3007
HspAI	GCGC	5 cut(s)	112, 802, 2798, 2800, 3266
Kpn2I	TCCGGA	2 cut(s)	40, 3121
Ksp22I	TGATCA	2 cut(s)	1195, 1497
LmnI	GCTCC	7 cut(s)	109, 1750, 1870, 2070, 2224, 2758, 3229
Lsp1109I	GCAGC	8 cut(s)	126, 129, 1115, 1753, 2491, 2782, 3095, 3238
LweI	GCATC	4 cut(s)	789, 1777, 2578, 2610
MabI	ACCWGGT	1 cut(s)	2587
MaeI	CTAG	7 cut(s)	411, 632, 1169, 1982, 2523, 2549, 2709
MaeII	ACGT	6 cut(s)	1026, 1216, 1660, 1888, 2955, 3118
MaeIII	GTNAC	4 cut(s)	634, 763, 1329, 2593
MfeI	CAATTG	2 cut(s)	695, 2012
MflI	RGATCY	9 cut(s)	37, 232, 922, 1311, 1357, 1823, 1903, 2289, 2992
MhlI	GDGCHC	4 cut(s)	135, 306, 1731, 2775
MlsI	TGGCCA	1 cut(s)	1631
MluNI	TGGCCA	1 cut(s)	1631
MlyI	GAGTC	8 cut(s)	272, 546, 734, 1478, 1770, 2336, 2913, 3185
MmeI	TCCRAC	2 cut(s)	652, 1798
Mox20I	TGGCCA	1 cut(s)	1631
Mph1103I	ATGCAT	2 cut(s)	872, 2583
MroI	TCCGGA	2 cut(s)	40, 3121
MscI	TGGCCA	1 cut(s)	1631
MslI	CAYNNNNRTG	4 cut(s)	577, 617, 1436, 1625
Msp20I	TGGCCA	1 cut(s)	1631
MspA1I	CMGCKG	3 cut(s)	66, 1106, 1150
MspCI	CTTAAG	1 cut(s)	2626
MspI	CCGG	4 cut(s)	41, 417, 2689, 3122
MspR9I	CCNGG	3 cut(s)	152, 418, 2589
MunI	CAATTG	2 cut(s)	695, 2012
Mva1269I	GAATGC	2 cut(s)	706, 870
MvaI	CCWGG	2 cut(s)	152, 2589
MvnI	CGCG	1 cut(s)	2800
MwoI	GCNNNNNNNGC	8 cut(s)	75, 80, 332, 1112, 1129, 1679, 2303, 2971
NciI	CCSGG	1 cut(s)	418
NlaIV	GGNNCC	1 cut(s)	2535
NmuCI	GTSAC	1 cut(s)	634
NsbI	TGCGCA	1 cut(s)	803
NsiI	ATGCAT	2 cut(s)	872, 2583
NspI	RCATGY	3 cut(s)	2044, 2128, 2978
PagI	TCATGA	2 cut(s)	769, 1291
PaqCI	CACCTGC	1 cut(s)	2756
PauI	GCGCGC	1 cut(s)	2798
PceI	AGGCCT	1 cut(s)	21
PciI	ACATGT	1 cut(s)	2124
PcsI	WCGNNNNNNNCGW	2 cut(s)	66, 141
PctI	GAATGC	2 cut(s)	706, 870
PfeI	GAWTC	8 cut(s)	103, 202, 1298, 1453, 2255, 2611, 2666, 2723
PflFI	GACNNNGTC	1 cut(s)	2381
PflMI	CCANNNNNTGG	1 cut(s)	3003
PfoI	TCCNGGA	1 cut(s)	150
PinAI	ACCGGT	1 cut(s)	2688
PleI	GAGTC	8 cut(s)	272, 545, 734, 1478, 1770, 2336, 2913, 3184
PmaCI	CACGTG	1 cut(s)	1889
PmlI	CACGTG	1 cut(s)	1889
PpsI	GAGTC	8 cut(s)	272, 545, 734, 1478, 1770, 2336, 2913, 3184
Ppu21I	YACGTR	2 cut(s)	1661, 1889
PscI	ACATGT	1 cut(s)	2124
PshAI	GACNNNNGTC	1 cut(s)	374
Psp124BI	GAGCTC	3 cut(s)	135, 306, 1731
Psp6I	CCWGG	2 cut(s)	150, 2587
PspCI	CACGTG	1 cut(s)	1889
PspFI	CCCAGC	1 cut(s)	284
PspGI	CCWGG	2 cut(s)	150, 2587
PspN4I	GGNNCC	1 cut(s)	2535
PspPI	GGNCC	8 cut(s)	521, 622, 728, 1172, 2552, 2585, 2679, 3282
PsrI	GAACNNNNNNTAC	2 cut(s)	1453, 1485
PstI	CTGCAG	1 cut(s)	1105
PstNI	CAGNNNCTG	3 cut(s)	880, 2292, 2930
PsuI	RGATCY	9 cut(s)	37, 232, 922, 1311, 1357, 1823, 1903, 2289, 2992
PsyI	GACNNNGTC	1 cut(s)	2381
PteI	GCGCGC	1 cut(s)	2798
PvuII	CAGCTG	2 cut(s)	1106, 1150
RsaI	GTAC	5 cut(s)	583, 828, 1181, 1400, 2234
RsaNI	GTAC	5 cut(s)	582, 827, 1180, 1399, 2233
RseI	CAYNNNNRTG	4 cut(s)	577, 617, 1436, 1625
SacI	GAGCTC	3 cut(s)	135, 306, 1731
Sau96I	GGNCC	8 cut(s)	521, 622, 728, 1172, 2552, 2585, 2679, 3282
SchI	GAGTC	8 cut(s)	272, 546, 734, 1478, 1770, 2336, 2913, 3185
ScrFI	CCNGG	3 cut(s)	152, 418, 2589
SduI	GDGCHC	4 cut(s)	135, 306, 1731, 2775
SexAI	ACCWGGT	1 cut(s)	2587
SfaNI	GCATC	4 cut(s)	789, 1777, 2578, 2610
SfcI	CTRYAG	2 cut(s)	1101, 1116
SinI	GGWCC	4 cut(s)	521, 2552, 2585, 3282
SmiMI	CAYNNNNRTG	4 cut(s)	577, 617, 1436, 1625
SmlI	CTYRAG	7 cut(s)	15, 458, 1203, 1724, 2390, 2626, 3269
SmoI	CTYRAG	7 cut(s)	15, 458, 1203, 1724, 2390, 2626, 3269
SnaBI	TACGTA	1 cut(s)	1661
SpeI	ACTAGT	1 cut(s)	631
SseBI	AGGCCT	1 cut(s)	21
SsiI	CCGC	6 cut(s)	66, 93, 96, 330, 2755, 3189
SspI	AATATT	2 cut(s)	1338, 1599
SspMI	CTAG	7 cut(s)	411, 632, 1169, 1982, 2523, 2549, 2709
SstI	GAGCTC	3 cut(s)	135, 306, 1731
StuI	AGGCCT	1 cut(s)	21
StyD4I	CCNGG	3 cut(s)	150, 416, 2587
StyI	CCWWGG	3 cut(s)	1168, 3033, 3285
TaiI	ACGT	6 cut(s)	1029, 1219, 1663, 1891, 2958, 3121
TaqII	GACCGA	1 cut(s)	2456
TatI	WGTACW	3 cut(s)	581, 826, 1398
TauI	GCSGC	2 cut(s)	69, 96
TfiI	GAWTC	8 cut(s)	103, 202, 1298, 1453, 2255, 2611, 2666, 2723
TscAI	CASTG	7 cut(s)	304, 579, 792, 820, 2386, 2931, 3004
TseFI	GTSAC	1 cut(s)	634
TseI	GCWGC	8 cut(s)	114, 117, 1103, 1766, 2504, 2795, 3083, 3251
Tsp45I	GTSAC	1 cut(s)	634
TspGWI	ACGGA	5 cut(s)	102, 534, 1263, 1571, 3274
TspRI	CASTG	7 cut(s)	304, 579, 792, 820, 2386, 2931, 3004
Tth111I	GACNNNGTC	1 cut(s)	2381
Van91I	CCANNNNNTGG	1 cut(s)	3003
Vha464I	CTTAAG	1 cut(s)	2626
VpaK11BI	GGWCC	4 cut(s)	521, 2552, 2585, 3282
XagI	CCTNNNNNAGG	1 cut(s)	2219
XapI	RAATTY	4 cut(s)	807, 1664, 2080, 2396
XceI	RCATGY	3 cut(s)	2044, 2128, 2978
XmaJI	CCTAGG	1 cut(s)	1168
XmiI	GTMKAC	1 cut(s)	1469
XspI	CTAG	7 cut(s)	411, 632, 1169, 1982, 2523, 2549, 2709
Zsp2I	ATGCAT	2 cut(s)	872, 2583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.