Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005477

Physical Location & Seq

Genomic Coordinates Reverse (-)

21587117 .. 21596881

Gene Structure 9765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G250900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3354 bp

ATGGAGGAGCCAGCCTCAGCCACAGCCACTGAACCATCGACTGTCCTCCGCCAGAAGAGGACCAGGGCTCAGACTCATAGTACTGAGAACCATGAGAGGACCAGCGCTGGGAGTGACCAGGCGGACCGCGAGAGCTCACCCGAGGACTTCGAAGAGACTCGTCCTAAAGCTAAACGAGGTCGACCTGCCGCAGCTGGCACTTCCGCCGCGCCACAAAAACTCGCCACTCTCACCTTGATTGAGGTCATCAAGGGCAACGGAAAACTTATTCCTCAAGCAGTCAAGCTCTGGGTCGAGCGATATGAAAAGGATCCAAAACCTGCTATGGTTGAACTCTTGATGATGCTGTTTGAGGCATGTGGCGCCAAGTATCATATCGAAGGTGAGTTGCTGGATGAGACTGATGTTGATGATGTCGTGGTTGCTCTGGTCGAGCTTGCTAGAAGTGGTAACGTTGAAGATTACCAAAGTTCAAAAAAGAAGGAGTTTAAGAACTTCAAAGATAATCTTCAATTGTTCTGGGATAATTTGGTCCGTGAATGTCAACATGGGCCATTGGTTGATCAGATTTTGTTCGAGAAGTGCATGGACTATATTATTGCTTTGTCATGCACTCCTCCAAGAGTTTATCGTCAGGCTGCTACTTTGGTGGGTCTCCAACTTGTCACATCATTTATAACTGTTGCTAACACACTTGGTTCTCAACGAGAAACTACTCGTAGACAATTAGATGCTGAAAAAAAGAAACGAACTGAGGGGCCTCGTGTGGAATCACTGAACAAGAGGTTCTCAACGACTCATGACCACATAACTATATTAGAGCAGATGATGCGCAAGATATTTCAAGGGTTATTTGTGCATCGCTATCGAGACATTGATCCAAATATTCGGATGTCTTGCATAGAGTCACTAGGGGTGTGGATTTTTTCCTATCCATCAATGTTCTTGCAGGATTTATACTTGAAGTATCTTGGATGGACGTTGAATGATAAAAGTGCTGGTGTAAGAAAAGCTTCTGTCCTTGCGTTGCAAAATCTTTATGAGGTTGATGATAATGTGCCAACTCTTGGTCTATTCACTGAAAGATTTTCTAGTCGGATGATTGATCTTGCTGATGACATCGACACTTCTGTGGCTGTATGTGCCATTGGCCTTGTTAAACAGCTACTAAGACATCAGCTTCTACCAGATGATGACTTAGGTCCTTTATATGATTTGCTTATTGATGATCCAGCAGAGATCAGGCATGCTATAGGAGCCTTAGTGTATGAACACTTGATTTCTCAAAAGTTCAATAGCTCCCAATCTGGTGCAAAAGGTGATGGCAACAATTCTTCTGAGGTCCATCTTGGCAGAATGTTGCAAATTCTAAGAGAGTTCTCTGCAGATCCGATTCTAAGTGTCTATGTCATTGATGATGTTTGGGAGTACATGAAGGCGATGAAGGACTGGAAGTGTATTATCTCCATGCTCTTGGATGAGAATCCTTTGATTGAGCTTACTGATGAGGATGCAACAAACTTGGTACGACTTCTTTGTGCATCTGTCAAAAAGGCTGTAGGAGAGAGGATTGTTCCTCCCACAGATAATCGGAAGCCATACTACAGTAAAGCTCAAAAAGAAGTATTTGAACACAACAGACGAGATATAACTCTTGCCATGATGAAGAACTACCCATTACTTCTACGTAAGTTCATGGCTGACAAGGCAAAAGTACCATCACTGATTGAAATTATTGTGCATATGAATCTTGAGCTATATTCCCTGAAGAGGCAGGAGCAGAATTTCAAAAGTGTCCTTCAACTTATCAAAGAGGCATTTTTTAAACATAGCGAGAGGGAGGCTCTGAGATCTTGTGTAAATGCTGTCAACCTTTGTTCCACAGAGAGTCAAGGGGAGCTAAAAGATTTTGCCCGTAATACATCAAAGGAACTTCAGGATGAGCTTATTGCTAAGCTTAAATCTGCAATGAAAGAAGTGGCGGATGGTGGTGATGATTATCCTCTTCTTGTAAATTTGAAAAGGTTGTATGAGCTTCAATTGTCAAGAGCTGTGCCTGACGAAAGCTTGTATGAAAATTTTGTCTCGACTATTCAGAGTTATACAAACAGGGACGACGAGGTTGTCAGTTTTCTGCTTCTCAACATGTCTTTGCATTTGGAGTGGTCTCTGCATTCAATCATAAATAGTGAGACTGTCTCTGAAGCATCTTTGTCTTCTCTATTAGCAAAACGCAAATCCTTGTCAGAGCAACTAGAGTACTTTCTTAACAGCCCTCCTGAATTGGAGGGTAATCGTGGTAATCTGCTAGCTTGTAGGGTTTGTATACTGCAAGCAGAATTGTGGTTTCTGTTCAGAAAGACAAATTTTTCTTCAACAAAGCTGGAAAGGTTGGGATATTATCCAGATGCGTCCATTCTTCAAAAGTTCTGGAACCTTTGTGTACAACAGCTCAGTATTTCAGATGAGGCAGAAGATGATGATGCGAACAAAGAGTATATTGAGGAGGCAAATAGAGATGCAGTGATGATTGCTGCTGCAAAGTTGGTTGCTAATGATAAAGTTTCTAAGGAGTATCTTGGTCCGGAGATTATCTCTAGATTTGTGATGCATGGAACAACTGTAGCGGAGATTATTAAGAATCTGATTACTTTTCTGAAGAAGAAAGATGATGATCTTCCCAAACTTTTCTTCGAATCACTAAAAAAGGCCTACCAGCGGTATATGGTTGAACTTTCTGGAAGTGATGATGAATCTTCAGCAAGCAAGCGTTTTCAAGAATGTAAAGAACTGGCTGCTCGGCTTTCTGGAATGTTTGTAGGTGCCGCCAGGAACAAGCACAGATCAGACATTTTAAAAATTGTTAACAATGGCATTGAATATGCTTTTCTAGATGCTCCAAAGCAGTTATCTTTTCTGGAAGGTGCTGTGCTCCATTTTGTATCCAAACTGCCAACACCTGATATCCTGGACATTGTGAAGGATGTCCAGAGCAGAACAGATAATGTAAATACAGATGAAGATCCTAGTGGCTGGCGCCCCTATCACACATTTGTTGATAGCTTGCTTGAGAAGTATGCAAAGAATGAAGGTATCCAAGATGAAAAAGATGGGACCTCTGTAAAGCGCAGGGGTCGTCCACGCAAAAGGCGTCGAGGAAAGGGACTTTTTGATGAGCACAGTTCAAGTGAAGAAGATGATTCAATAAGCGCATCTGACCATGAAAATGCTCAAGATGAAGAAAACAAGCAAGATGAGGATGACGATGAAGATGCTCCTTTAATACATTCAATTAGGTCATCATCAAAGTTGAGGTCATTGAGAGTGACAAGAGAGGAAACGAAGGCCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000819 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0048285 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051754 GO:0061982 GO:0061983 GO:0070192 GO:0070601 GO:0071840 GO:0098813 GO:0140013 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

STAG

Protein Analysis

1118

Amino Acids

127.09

Weight (kDa)

5.52

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47980
fragaria_vesca	FvH4_2g24570 FvH4_2g24570 FvH4_2g24570 FvH4_2g24570 FvH4_2g24570 FvH4_2g24570
malus_domestica	MD11G1296700.v1.1
prunus_persica	Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1 Prupe.8G250900_v2.0.a1
pyrus_communis	pycom11g26100
rosa_chinensis	RchiOBHm_Chr6g0292391
rosa_laevigata	RLG00000012032
rosa_multiflora	Rmu_sc0012226.1_g000001 Rmu_sc0023540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026580 Rroxscaffold_7G00175100
rosa_rugosa	Rorug06G0226100 Rorug06G0226200 Rorug06G0226300
rosa_samantha	Rh6AG339600 Rh6BG346800 Rh6CG353600 Rh6DG339600
rosa_wichuraiana	Rw6G029550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	677
AasI	GACNNNNNNGTC	1 cut(s)	2123
Acc16I	TGCGCA	1 cut(s)	833
Acc36I	ACCTGC	2 cut(s)	193, 328
AccB1I	GGYRCC	3 cut(s)	362, 2822, 3036
AccB7I	CCANNNNNTGG	1 cut(s)	1067
AccI	GTMKAC	3 cut(s)	181, 721, 2326
AccII	CGCG	2 cut(s)	129, 209
AccIII	TCCGGA	1 cut(s)	2584
AclI	AACGTT	1 cut(s)	453
AclWI	GGATC	6 cut(s)	305, 318, 872, 1223, 1382, 3017
AcsI	RAATTY	5 cut(s)	1365, 1783, 2014, 2077, 2365
AcuI	CTGAAG	5 cut(s)	1787, 1919, 2223, 2678, 2742
AcyI	GRCGYC	3 cut(s)	363, 3037, 3151
AfaI	GTAC	6 cut(s)	82, 1430, 1527, 1716, 2261, 2445
AfeI	AGCGCT	1 cut(s)	106
AfiI	CCNNNNNNNGG	4 cut(s)	108, 1067, 1770, 2718
AflIII	ACRYGT	1 cut(s)	2145
AjnI	CCWGG	4 cut(s)	62, 117, 2828, 2967
AjuI	GAANNNNNNNTTGG	2 cut(s)	2675, 2707
AleI	CACNNNNGTG	1 cut(s)	1130
Alw21I	GWGCWC	3 cut(s)	137, 2934, 3180
Alw26I	GTCTC	8 cut(s)	149, 392, 659, 864, 2089, 2172, 2186, 2203
AlwI	GGATC	6 cut(s)	305, 318, 872, 1223, 1382, 3017
AlwNI	CAGNNNCTG	1 cut(s)	29
Ama87I	CYCGRG	1 cut(s)	140
Aor13HI	TCCGGA	1 cut(s)	2584
Aor51HI	AGCGCT	1 cut(s)	106
AoxI	GGCC	5 cut(s)	551, 758, 1150, 2709, 3345
ApeKI	GCWGC	5 cut(s)	191, 638, 2534, 2537, 2795
ApoI	RAATTY	5 cut(s)	1365, 1783, 2014, 2077, 2365
ArsI	GACNNNNNNTTYG	2 cut(s)	3299, 3331
Asp700I	GAANNNNTTC	1 cut(s)	1012
AspLEI	GCGC	7 cut(s)	107, 211, 365, 834, 3039, 3129, 3212
AsuHPI	GGTGA	5 cut(s)	129, 223, 395, 1331, 2003
AsuII	TTCGAA	2 cut(s)	150, 2694
AsuNHI	GCTAGC	1 cut(s)	2308
AvaI	CYCGRG	1 cut(s)	140
AvaII	GGWCC	8 cut(s)	60, 99, 124, 532, 1202, 1342, 2582, 3114
BamHI	GGATCC	1 cut(s)	310
BanI	GGYRCC	3 cut(s)	362, 2822, 3036
BanII	GRGCYC	2 cut(s)	70, 137
BarI	GAAGNNNNNNTAC	2 cut(s)	1586, 1618
BauI	CACGAG	1 cut(s)	762
BbsI	GAAGAC	1 cut(s)	2208
Bbv12I	GWGCWC	3 cut(s)	137, 2934, 3180
BbvCI	CCTCAGC	1 cut(s)	16
BbvI	GCAGC	5 cut(s)	203, 625, 2521, 2524, 2782
BccI	CCATC	8 cut(s)	43, 943, 969, 1316, 1353, 1726, 1979, 3104
BcgI	CGANNNNNNTGC	4 cut(s)	848, 882, 3254, 3288
BciT130I	CCWGG	4 cut(s)	64, 119, 2830, 2969
BciVI	GTATCC	2 cut(s)	2953, 3104
BclI	TGATCA	1 cut(s)	562
BcoDI	GTCTC	8 cut(s)	149, 392, 659, 864, 2089, 2172, 2186, 2203
BfaI	CTAG	8 cut(s)	441, 911, 1092, 2255, 2309, 2598, 2891, 3027
BfmI	CTRYAG	5 cut(s)	1251, 1383, 1557, 1603, 2622
BfoI	RGCGCY	3 cut(s)	108, 366, 3040
BfuAI	ACCTGC	2 cut(s)	193, 328
BfuI	GTATCC	2 cut(s)	2953, 3104
BglII	AGATCT	1 cut(s)	1850
BisI	GCNGC	8 cut(s)	189, 192, 207, 639, 2535, 2538, 2796, 2826
BlpI	GCTNAGC	1 cut(s)	1953
BlsI	GCNGC	8 cut(s)	190, 193, 208, 640, 2536, 2539, 2797, 2827
BmcAI	AGTACT	2 cut(s)	82, 2261
Bme1390I	CCNGG	4 cut(s)	64, 119, 2830, 2969
Bme18I	GGWCC	8 cut(s)	60, 99, 124, 532, 1202, 1342, 2582, 3114
BmeT110I	CYCGRG	1 cut(s)	140
BmiI	GGNNCC	9 cut(s)	9, 312, 364, 759, 1258, 2435, 2824, 3038, 3115
BmrFI	CCNGG	4 cut(s)	64, 119, 2830, 2969
BmtI	GCTAGC	1 cut(s)	2312
BoxI	GACNNNNGTC	1 cut(s)	1200
BpiI	GAAGAC	1 cut(s)	2208
BplI	GAGNNNNNCTC	7 cut(s)	31, 1828, 1860, 2183, 2215, 2579, 2611
Bpu10I	CCTNAGC	1 cut(s)	16
Bpu1102I	GCTNAGC	1 cut(s)	1953
Bpu14I	TTCGAA	2 cut(s)	150, 2694
BpuEI	CTTGAG	4 cut(s)	258, 1772, 3089, 3216
BsaAI	YACGTR	1 cut(s)	1688
BsaBI	GATNNNNATC	4 cut(s)	1482, 1998, 2673, 3021
BsaHI	GRCGYC	3 cut(s)	363, 3037, 3151
BsaI	GGTCTC	2 cut(s)	659, 2172
BsaJI	CCNNGG	2 cut(s)	63, 141
BsaWI	WCCGGW	1 cut(s)	2584
BsaXI	ACNNNNNCTCC	2 cut(s)	1248, 1278
Bsc4I	CCNNNNNNNGG	4 cut(s)	108, 1067, 1770, 2718
Bse1I	ACTGG	2 cut(s)	1454, 2796
Bse3DI	GCAATG	1 cut(s)	1974
Bse8I	GATNNNNATC	4 cut(s)	1482, 1998, 2673, 3021
BseAI	TCCGGA	1 cut(s)	2584
BseBI	CCWGG	4 cut(s)	64, 119, 2830, 2969
BseDI	CCNNGG	2 cut(s)	63, 141
BseJI	GATNNNNATC	4 cut(s)	1482, 1998, 2673, 3021
BseLI	CCNNNNNNNGG	4 cut(s)	108, 1067, 1770, 2718
BseMI	GCAATG	1 cut(s)	1974
BseMII	CTCAG	7 cut(s)	30, 75, 83, 744, 1329, 1838, 2467
BseNI	ACTGG	2 cut(s)	1454, 2796
BseRI	GAGGAG	3 cut(s)	20, 606, 2519
BseXI	GCAGC	5 cut(s)	203, 625, 2521, 2524, 2782
BseYI	CCCAGC	1 cut(s)	107
Bsh1236I	CGCG	2 cut(s)	129, 209
BshFI	GGCC	5 cut(s)	553, 760, 1152, 2711, 3347
BshNI	GGYRCC	3 cut(s)	362, 2822, 3036
BsiHKAI	GWGCWC	3 cut(s)	137, 2934, 3180
BsiHKCI	CYCGRG	1 cut(s)	140
BsiSI	CCGG	1 cut(s)	2585
BslFI	GGGAC	3 cut(s)	2126, 3127, 3177
BslI	CCNNNNNNNGG	4 cut(s)	108, 1067, 1770, 2718
BsmAI	GTCTC	8 cut(s)	149, 392, 659, 864, 2089, 2172, 2186, 2203
BsmFI	GGGAC	3 cut(s)	2126, 3127, 3177
BsmI	GAATGC	1 cut(s)	2173
BsnI	GGCC	5 cut(s)	553, 760, 1152, 2711, 3347
Bso31I	GGTCTC	2 cut(s)	659, 2172
BsoBI	CYCGRG	1 cut(s)	140
Bsp119I	TTCGAA	2 cut(s)	150, 2694
Bsp1286I	GDGCHC	4 cut(s)	70, 137, 2934, 3180
Bsp13I	TCCGGA	1 cut(s)	2584
Bsp1407I	TGTACA	1 cut(s)	2443
Bsp1720I	GCTNAGC	1 cut(s)	1953
BspANI	GGCC	5 cut(s)	553, 760, 1152, 2711, 3347
BspCNI	CTCAG	7 cut(s)	29, 76, 82, 745, 1330, 1839, 2466
BspEI	TCCGGA	1 cut(s)	2584
BspFNI	CGCG	2 cut(s)	129, 209
BspHI	TCATGA	1 cut(s)	799
BspLI	GGNNCC	9 cut(s)	9, 312, 364, 759, 1258, 2435, 2824, 3038, 3115
BspMAI	CTGCAG	1 cut(s)	1387
BspMI	ACCTGC	2 cut(s)	193, 328
BspOI	GCTAGC	1 cut(s)	2312
BspPI	GGATC	6 cut(s)	305, 318, 872, 1223, 1382, 3017
BspT104I	TTCGAA	2 cut(s)	150, 2694
BspT107I	GGYRCC	3 cut(s)	362, 2822, 3036
BspTNI	GGTCTC	2 cut(s)	659, 2172
BsrDI	GCAATG	1 cut(s)	1974
BsrGI	TGTACA	1 cut(s)	2443
BsrI	ACTGG	2 cut(s)	1454, 2796
BssECI	CCNNGG	2 cut(s)	63, 141
BssNAI	GTATAC	1 cut(s)	2327
BssNI	GRCGYC	3 cut(s)	363, 3037, 3151
BssSI	CACGAG	1 cut(s)	762
Bst1107I	GTATAC	1 cut(s)	2327
Bst2BI	CACGAG	1 cut(s)	762
Bst2UI	CCWGG	4 cut(s)	64, 119, 2830, 2969
Bst4CI	ACNGT	6 cut(s)	43, 682, 1607, 2197, 2623, 3182
Bst6I	CTCTTC	4 cut(s)	50, 147, 1763, 2010
BstACI	GRCGYC	3 cut(s)	363, 3037, 3151
BstAPI	GCANNNNNTGC	1 cut(s)	829
BstAUI	TGTACA	1 cut(s)	2443
BstBAI	YACGTR	1 cut(s)	1688
BstBI	TTCGAA	2 cut(s)	150, 2694
BstFNI	CGCG	2 cut(s)	129, 209
BstH2I	RGCGCY	3 cut(s)	108, 366, 3040
BstHHI	GCGC	7 cut(s)	107, 211, 365, 834, 3039, 3129, 3212
BstMAI	GTCTC	8 cut(s)	149, 392, 659, 864, 2089, 2172, 2186, 2203
BstMWI	GCNNNNNNNGC	5 cut(s)	362, 829, 1142, 1256, 1706
BstNI	CCWGG	4 cut(s)	64, 119, 2830, 2969
BstNSI	RCATGY	3 cut(s)	360, 1250, 2149
BstPAI	GACNNNNGTC	1 cut(s)	1200
BstSCI	CCNGG	4 cut(s)	62, 117, 2828, 2967
BstSFI	CTRYAG	5 cut(s)	1251, 1383, 1557, 1603, 2622
BstSNI	TACGTA	1 cut(s)	1688
BstUI	CGCG	2 cut(s)	129, 209
BstV1I	GCAGC	5 cut(s)	203, 625, 2521, 2524, 2782
BstV2I	GAAGAC	1 cut(s)	2208
BstX2I	RGATCY	4 cut(s)	310, 1387, 1850, 3022
BstXI	CCANNNNNNTGG	1 cut(s)	1474
BstYI	RGATCY	4 cut(s)	310, 1387, 1850, 3022
BstZ17I	GTATAC	1 cut(s)	2327
BsuI	GTATCC	2 cut(s)	2953, 3104
BsuRI	GGCC	5 cut(s)	553, 760, 1152, 2711, 3347
BtgZI	GCGATG	2 cut(s)	845, 1454
BtsI	GCAGTG	1 cut(s)	2529
BtsIMutI	CAGTG	5 cut(s)	27, 773, 1077, 1721, 2529
BveI	ACCTGC	2 cut(s)	193, 328
CaiI	CAGNNNCTG	1 cut(s)	29
CciI	TCATGA	1 cut(s)	799
CfoI	GCGC	7 cut(s)	107, 211, 365, 834, 3039, 3129, 3212
CpoI	CGGWCCG	1 cut(s)	124
CseI	GACGC	2 cut(s)	2400, 3140
Csp6I	GTAC	6 cut(s)	81, 1429, 1526, 1715, 2260, 2444
CspI	CGGWCCG	1 cut(s)	124
CviQI	GTAC	6 cut(s)	81, 1429, 1526, 1715, 2260, 2444
DinI	GGCGCC	2 cut(s)	364, 3038
DraI	TTTAAA	2 cut(s)	1825, 2856
DrdI	GACNNNNNNGTC	1 cut(s)	2123
DseDI	GACNNNNNNGTC	1 cut(s)	2123
Eam1104I	CTCTTC	4 cut(s)	50, 147, 1763, 2010
EarI	CTCTTC	4 cut(s)	50, 147, 1763, 2010
EciI	GGCGGA	4 cut(s)	38, 137, 193, 1997
Ecl136II	GAGCTC	1 cut(s)	135
Eco105I	TACGTA	1 cut(s)	1688
Eco147I	AGGCCT	1 cut(s)	2711
Eco24I	GRGCYC	2 cut(s)	70, 137
Eco31I	GGTCTC	2 cut(s)	659, 2172
Eco32I	GATATC	1 cut(s)	2965
Eco47I	GGWCC	8 cut(s)	60, 99, 124, 532, 1202, 1342, 2582, 3114
Eco47III	AGCGCT	1 cut(s)	106
Eco53kI	GAGCTC	1 cut(s)	135
Eco57I	CTGAAG	5 cut(s)	1787, 1919, 2223, 2678, 2742
Eco88I	CYCGRG	1 cut(s)	140
EcoICRI	GAGCTC	1 cut(s)	135
EcoO109I	RGGNCCY	3 cut(s)	758, 1202, 3114
EcoRII	CCWGG	4 cut(s)	62, 117, 2828, 2967
EcoRV	GATATC	1 cut(s)	2965
EcoT22I	ATGCAT	1 cut(s)	2613
EcoT38I	GRGCYC	2 cut(s)	70, 137
EgeI	GGCGCC	2 cut(s)	364, 3038
EheI	GGCGCC	2 cut(s)	364, 3038
FalI	AAGNNNNNCTT	4 cut(s)	492, 524, 997, 1029
FaqI	GGGAC	3 cut(s)	2126, 3127, 3177
FauNDI	CATATG	1 cut(s)	1743
FbaI	TGATCA	1 cut(s)	562
FblI	GTMKAC	3 cut(s)	181, 721, 2326
Fnu4HI	GCNGC	8 cut(s)	189, 192, 207, 639, 2535, 2538, 2796, 2826
FriOI	GRGCYC	2 cut(s)	70, 137
Fsp4HI	GCNGC	8 cut(s)	189, 192, 207, 639, 2535, 2538, 2796, 2826
FspBI	CTAG	8 cut(s)	441, 911, 1092, 2255, 2309, 2598, 2891, 3027
FspI	TGCGCA	1 cut(s)	833
GlaI	GCGC	7 cut(s)	106, 210, 364, 833, 3038, 3128, 3211
GluI	GCNGC	8 cut(s)	189, 192, 207, 639, 2535, 2538, 2796, 2826
GsaI	CCCAGC	1 cut(s)	111
HaeII	RGCGCY	3 cut(s)	108, 366, 3040
HaeIII	GGCC	5 cut(s)	553, 760, 1152, 2711, 3347
HapII	CCGG	1 cut(s)	2585
HgaI	GACGC	2 cut(s)	2400, 3140
HhaI	GCGC	7 cut(s)	107, 211, 365, 834, 3039, 3129, 3212
Hin1I	GRCGYC	3 cut(s)	363, 3037, 3151
Hin6I	GCGC	7 cut(s)	105, 209, 363, 832, 3037, 3127, 3210
HinP1I	GCGC	7 cut(s)	105, 209, 363, 832, 3037, 3127, 3210
HincII	GTYRAC	4 cut(s)	182, 545, 1870, 2866
HindII	GTYRAC	4 cut(s)	182, 545, 1870, 2866
HindIII	AAGCTT	3 cut(s)	1011, 1955, 2065
HpaI	GTTAAC	1 cut(s)	2866
HpaII	CCGG	1 cut(s)	2585
HphI	GGTGA	5 cut(s)	129, 223, 395, 1331, 2003
Hpy166II	GTNNAC	8 cut(s)	182, 545, 722, 1870, 2327, 2444, 2866, 3140
Hpy8I	GTNNAC	8 cut(s)	182, 545, 722, 1870, 2327, 2444, 2866, 3140
Hpy99I	CGWCG	2 cut(s)	2120, 3156
HpyAV	CCTTC	9 cut(s)	374, 475, 1429, 1438, 1808, 2915, 2974, 3083, 3337
HpyCH4III	ACNGT	6 cut(s)	43, 682, 1607, 2197, 2623, 3182
HpyCH4IV	ACGT	3 cut(s)	453, 980, 1687
HpyF10VI	GCNNNNNNNGC	5 cut(s)	362, 829, 1142, 1256, 1706
HpySE526I	ACGT	3 cut(s)	453, 980, 1687
Hsp92I	GRCGYC	3 cut(s)	363, 3037, 3151
HspAI	GCGC	7 cut(s)	105, 209, 363, 832, 3037, 3127, 3210
KasI	GGCGCC	2 cut(s)	362, 3036
Kpn2I	TCCGGA	1 cut(s)	2584
Ksp22I	TGATCA	1 cut(s)	562
KspAI	GTTAAC	1 cut(s)	2866
LmnI	GCTCC	8 cut(s)	7, 1256, 1304, 1777, 1897, 2902, 2937, 3280
Lsp1109I	GCAGC	5 cut(s)	203, 625, 2521, 2524, 2782
MaeI	CTAG	8 cut(s)	441, 911, 1092, 2255, 2309, 2598, 2891, 3027
MaeII	ACGT	3 cut(s)	453, 980, 1687
MaeIII	GTNAC	5 cut(s)	113, 449, 664, 906, 3325
MfeI	CAATTG	2 cut(s)	512, 2039
MflI	RGATCY	4 cut(s)	310, 1387, 1850, 3022
MhlI	GDGCHC	4 cut(s)	70, 137, 2934, 3180
Mly113I	GGCGCC	2 cut(s)	363, 3037
MlyI	GAGTC	5 cut(s)	67, 151, 790, 914, 1897
MmeI	TCCRAC	2 cut(s)	682, 1076
Mph1103I	ATGCAT	1 cut(s)	2613
MroI	TCCGGA	1 cut(s)	2584
MroXI	GAANNNNTTC	1 cut(s)	1012
MseI	TTAA	9 cut(s)	489, 1158, 1824, 1959, 2268, 2637, 2855, 2865, 3281
MslI	CAYNNNNRTG	2 cut(s)	1130, 3225
MspA1I	CMGCKG	2 cut(s)	194, 2719
MspI	CCGG	1 cut(s)	2585
MspR9I	CCNGG	4 cut(s)	64, 119, 2830, 2969
MunI	CAATTG	2 cut(s)	512, 2039
Mva1269I	GAATGC	1 cut(s)	2173
MvaI	CCWGG	4 cut(s)	64, 119, 2830, 2969
MvnI	CGCG	2 cut(s)	129, 209
MwoI	GCNNNNNNNGC	5 cut(s)	362, 829, 1142, 1256, 1706
NarI	GGCGCC	2 cut(s)	363, 3037
NdeI	CATATG	1 cut(s)	1743
NheI	GCTAGC	1 cut(s)	2308
NlaIV	GGNNCC	9 cut(s)	9, 312, 364, 759, 1258, 2435, 2824, 3038, 3115
NmeAIII	GCCGAG	1 cut(s)	2779
NmuCI	GTSAC	4 cut(s)	113, 664, 906, 3325
NsbI	TGCGCA	1 cut(s)	833
NsiI	ATGCAT	1 cut(s)	2613
NspI	RCATGY	3 cut(s)	360, 1250, 2149
NspV	TTCGAA	2 cut(s)	150, 2694
OliI	CACNNNNGTG	1 cut(s)	1130
PaeI	GCATGC	1 cut(s)	1250
PagI	TCATGA	1 cut(s)	799
PceI	AGGCCT	1 cut(s)	2711
PciI	ACATGT	1 cut(s)	2145
PcsI	WCGNNNNNNNCGW	1 cut(s)	3148
PctI	GAATGC	1 cut(s)	2173
PdmI	GAANNNNTTC	1 cut(s)	1012
PfeI	GAWTC	8 cut(s)	770, 1393, 1483, 1747, 2641, 2696, 2753, 3200
PflMI	CCANNNNNTGG	1 cut(s)	1067
PfoI	TCCNGGA	1 cut(s)	2967
PkrI	GCNGC	8 cut(s)	190, 193, 208, 640, 2536, 2539, 2797, 2827
PleI	GAGTC	5 cut(s)	67, 151, 790, 913, 1896
PluTI	GGCGCC	2 cut(s)	366, 3040
PpsI	GAGTC	5 cut(s)	67, 151, 790, 913, 1896
Ppu21I	YACGTR	1 cut(s)	1688
PpuMI	RGGWCCY	2 cut(s)	1202, 3114
PscI	ACATGT	1 cut(s)	2145
PshAI	GACNNNNGTC	1 cut(s)	1200
PsiI	TTATAA	1 cut(s)	677
Psp124BI	GAGCTC	1 cut(s)	137
Psp1406I	AACGTT	1 cut(s)	453
Psp5II	RGGWCCY	2 cut(s)	1202, 3114
Psp6I	CCWGG	4 cut(s)	62, 117, 2828, 2967
PspFI	CCCAGC	1 cut(s)	107
PspGI	CCWGG	4 cut(s)	62, 117, 2828, 2967
PspN4I	GGNNCC	9 cut(s)	9, 312, 364, 759, 1258, 2435, 2824, 3038, 3115
PspPPI	RGGWCCY	2 cut(s)	1202, 3114
PstI	CTGCAG	1 cut(s)	1387
PstNI	CAGNNNCTG	1 cut(s)	29
PsuI	RGATCY	4 cut(s)	310, 1387, 1850, 3022
PvuII	CAGCTG	1 cut(s)	194
RsaI	GTAC	6 cut(s)	82, 1430, 1527, 1716, 2261, 2445
RsaNI	GTAC	6 cut(s)	81, 1429, 1526, 1715, 2260, 2444
RseI	CAYNNNNRTG	2 cut(s)	1130, 3225
Rsr2I	CGGWCCG	1 cut(s)	124
RsrII	CGGWCCG	1 cut(s)	124
SacI	GAGCTC	1 cut(s)	137
SalI	GTCGAC	1 cut(s)	180
SaqAI	TTAA	9 cut(s)	489, 1158, 1824, 1959, 2268, 2637, 2855, 2865, 3281
SatI	GCNGC	8 cut(s)	189, 192, 207, 639, 2535, 2538, 2796, 2826
ScaI	AGTACT	2 cut(s)	82, 2261
SchI	GAGTC	5 cut(s)	67, 151, 790, 914, 1897
ScrFI	CCNGG	4 cut(s)	64, 119, 2830, 2969
SduI	GDGCHC	4 cut(s)	70, 137, 2934, 3180
SfcI	CTRYAG	5 cut(s)	1251, 1383, 1557, 1603, 2622
SfoI	GGCGCC	2 cut(s)	364, 3038
SfuI	TTCGAA	2 cut(s)	150, 2694
SinI	GGWCC	8 cut(s)	60, 99, 124, 532, 1202, 1342, 2582, 3114
SmiMI	CAYNNNNRTG	2 cut(s)	1130, 3225
SmlI	CTYRAG	4 cut(s)	273, 1751, 3068, 3231
SmoI	CTYRAG	4 cut(s)	273, 1751, 3068, 3231
SnaBI	TACGTA	1 cut(s)	1688
SphI	GCATGC	1 cut(s)	1250
SseBI	AGGCCT	1 cut(s)	2711
SspDI	GGCGCC	2 cut(s)	362, 3036
SspI	AATATT	1 cut(s)	886
SspMI	CTAG	8 cut(s)	441, 911, 1092, 2255, 2309, 2598, 2891, 3027
SstI	GAGCTC	1 cut(s)	137
StuI	AGGCCT	1 cut(s)	2711
StyD4I	CCNGG	4 cut(s)	62, 117, 2828, 2967
TaaI	ACNGT	6 cut(s)	43, 682, 1607, 2197, 2623, 3182
TaiI	ACGT	3 cut(s)	456, 983, 1690
TatI	WGTACW	4 cut(s)	80, 1428, 2259, 2443
TauI	GCSGC	3 cut(s)	191, 209, 2828
TfiI	GAWTC	8 cut(s)	770, 1393, 1483, 1747, 2641, 2696, 2753, 3200
Tru1I	TTAA	9 cut(s)	489, 1158, 1824, 1959, 2268, 2637, 2855, 2865, 3281
Tru9I	TTAA	9 cut(s)	489, 1158, 1824, 1959, 2268, 2637, 2855, 2865, 3281
TscAI	CASTG	5 cut(s)	34, 780, 1084, 1728, 2529
TseFI	GTSAC	4 cut(s)	113, 664, 906, 3325
TseI	GCWGC	5 cut(s)	191, 638, 2534, 2537, 2795
Tsp45I	GTSAC	4 cut(s)	113, 664, 906, 3325
TspGWI	ACGGA	2 cut(s)	273, 524
TspRI	CASTG	5 cut(s)	34, 780, 1084, 1728, 2529
Van91I	CCANNNNNTGG	1 cut(s)	1067
VpaK11BI	GGWCC	8 cut(s)	60, 99, 124, 532, 1202, 1342, 2582, 3114
XapI	RAATTY	5 cut(s)	1365, 1783, 2014, 2077, 2365
XbaI	TCTAGA	2 cut(s)	2597, 2890
XceI	RCATGY	3 cut(s)	360, 1250, 2149
XmiI	GTMKAC	3 cut(s)	181, 721, 2326
XmnI	GAANNNNTTC	1 cut(s)	1012
XspI	CTAG	8 cut(s)	441, 911, 1092, 2255, 2309, 2598, 2891, 3027
ZrmI	AGTACT	2 cut(s)	82, 2261
Zsp2I	ATGCAT	1 cut(s)	2613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.