AT3G01090

SNF1-related protein kinase catalytic subunit alpha

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0005352
Physical Location & Seq
Reverse (-)
31145 .. 34670
3526 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G01090.1

Sequence Viewer

Length: 1539 bp
ATGGATGGATCAGGCACAGGCAGTAGAAGTGGGGTAGAATCGATTCTACCAAATTACAAGCTTGGGAGAACTCTTGGTATTGGTTCCTTTGGTAGGGTGAAGATAGCTGAGCATGCATTGACAGGACATAAGGTTGCTATCAAGATCCTCAATCGTCGCAAAATCAAGAACATGGAGATGGAGGAGAAAGTGAGGAGAGAGATCAAAATCTTGAGACTATTTATGCATCCTCACATCATCCGTCTCTATGAGGTTATAGAGACTCCCACAGATATTTATCTTGTCATGGAGTATGTGAACTCTGGTGAGCTATTTGACTATATTGTTGAGAAGGGTAGATTGCAGGAGGATGAGGCGAGGAACTTTTTTCAGCAGATAATATCAGGAGTGGAATACTGCCATCGAAACATGGTGGTTCACAGAGACCTCAAGCCTGAAAACTTGCTTTTGGACTCTAAATGCAATGTAAAGATTGCTGATTTTGGCCTGAGCAACATAATGCGAGATGGTCATTTTTTGAAGACAAGTTGTGGAAGTCCAAATTATGCCGCTCCAGAGGTAATTTCGGGCAAGTTATATGCTGGCCCTGAAGTAGATGTCTGGAGCTGTGGTGTGATACTCTACGCTCTTCTCTGTGGGACGCTTCCATTTGATGATGAAAACATTCCCAACCTTTTTAAGAAGATAAAGGGAGGGATATACACATTACCTAGCCATTTATCTCCTGGTGCTAGAGATTTGATCCCCCGGATGCTTGTAGTTGACCCCATGAAACGAGTAACCATCCCTGAGATCCGGCAACACCCTTGGTTCCAAGCTCATCTTCCGAGGTATTTAGCTGTTCCTCCTCCAGATACTGTGCAACAGGCAAAAAAGATTGACGAGGAGATTCTCCAAGAAGTTATCAATATGGGATTTGACAGAAACCACCTCATCGAATCGCTCCGCAACCGAACCCAGAATGATGGCACTGTGACGTACTATCTGATACTGGACAATCGTTTCCGTGCCTCTAGTGGTTATCTCGGGGCTGAGTTTCAAGAGACCATGGAAGGTACTCCCCGTATGCATCCAGCAGAAAGCGTTGCTTCACCTGTTAGCCATCGGCTTCCAGGACTGATGGAATATCAAGGAGTTGGCTTGAGATCTCAATACCCTGTTGAGAGAAAATGGGCTCTTGGACTTCAGTCTCGGGCTCATCCCCGTGAAATAATGACGGAAGTCCTGAAAGCCCTGCAAGATTTGAATGTATGTTGGAAGAAGATAGGGCACTACAACATGAAGTGCAGATGGGTTCCTAACAGCAGCGCAGATGGTATGCTCAGTAACTCGATGCACGATAACAACTACTTTGGAGACGAGTCCAGCATAATAGAGAACGAAGCAGCTGTTAAGTCGCCCAATGTTGTCAAGTTTGAAATTCAGTTGTATAAAACTCGGGACGACAAGTATCTACTGGATTTGCAGAGAGTACAAGGTCCTCAGTTCTTGTTCTTGGATCTGTGTGCTGCTTTTCTTGCTCAGCTCCGAGTCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007584 GO:0008150 GO:0008152 GO:0009593 GO:0009594 GO:0009605 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009743 GO:0009755 GO:0009756 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010050 GO:0010150 GO:0010182 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023052 GO:0031667 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048364 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071396 GO:0071495 GO:0071704 GO:0080022 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418
Pfam Domains
Protein Families
KA1 Pkinase UBA

Protein Analysis

512

Amino Acids

58.37

Weight (kDa)

8.01

Isoelectric Point (pI)

48.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 19 - 271 3.6e-83 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 20 - 267 1.4e-40 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 118 - 219 6.2e-07 Kinase-like
UBA PF00627 293 - 329 5.9e-08 UBA/TS-N domain
KA1 PF02149 469 - 511 1.9e-14 Kinase associated domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 551
AciI CCGC 2 cut(s) 549, 946
AclWI GGATC 5 cut(s) 16, 139, 736, 787, 1506
AcsI RAATTY 1 cut(s) 1419
AcuI CTGAAG 2 cut(s) 609, 1169
AfaI GTAC 3 cut(s) 980, 1057, 1473
AfiI CCNNNNNNNGG 1 cut(s) 93
AgsI TTSAA 4 cut(s) 520, 1040, 1246, 1418
AjnI CCWGG 2 cut(s) 724, 1111
AjuI GAANNNNNNNTTGG 2 cut(s) 807, 839
AluBI AGCT 8 cut(s) 61, 107, 310, 606, 818, 839, 1388, 1525
AluI AGCT 8 cut(s) 61, 107, 310, 606, 818, 839, 1388, 1525
Alw26I GTCTC 7 cut(s) 208, 248, 254, 417, 1037, 1194, 1350
AlwI GGATC 5 cut(s) 16, 139, 736, 787, 1506
AlwNI CAGNNNCTG 1 cut(s) 857
Ama87I CYCGRG 3 cut(s) 1025, 1191, 1437
AoxI GGCC 2 cut(s) 484, 583
ApeKI GCWGC 3 cut(s) 1305, 1385, 1508
ApoI RAATTY 1 cut(s) 1419
Asp700I GAANNNNTTC 2 cut(s) 42, 663
AspLEI GCGC 1 cut(s) 1310
AspS9I GGNCC 2 cut(s) 584, 1478
AsuC2I CCSGG 1 cut(s) 748
AsuHPI GGTGA 3 cut(s) 109, 317, 1083
AvaI CYCGRG 3 cut(s) 1025, 1191, 1437
AvaII GGWCC 1 cut(s) 1478
BaeGI GKGCMC 1 cut(s) 1272
BanII GRGCYC 2 cut(s) 1177, 1198
BbsI GAAGAC 1 cut(s) 527
BbvI GCAGC 3 cut(s) 1317, 1397, 1495
BccI CCATC 9 cut(s) 172, 408, 500, 791, 959, 1110, 1114, 1284, 1307
BciT130I CCWGG 2 cut(s) 726, 1113
BcnI CCSGG 1 cut(s) 748
BcoDI GTCTC 7 cut(s) 208, 248, 254, 417, 1037, 1194, 1350
BfaI CTAG 3 cut(s) 711, 732, 1014
BglII AGATCT 1 cut(s) 1145
BisI GCNGC 4 cut(s) 549, 1306, 1386, 1509
BlpI GCTNAGC 2 cut(s) 108, 1521
BlsI GCNGC 4 cut(s) 550, 1307, 1387, 1510
Bme1390I CCNGG 3 cut(s) 726, 748, 1113
Bme18I GGWCC 1 cut(s) 1478
BmeT110I CYCGRG 3 cut(s) 1025, 1191, 1437
BmgT120I GGNCC 2 cut(s) 584, 1478
BmiI GGNNCC 3 cut(s) 85, 812, 1296
BmrFI CCNGG 3 cut(s) 726, 748, 1113
BmsI GCATC 4 cut(s) 235, 741, 1078, 1323
BoxI GACNNNNGTC 2 cut(s) 1186, 1220
BpiI GAAGAC 1 cut(s) 527
BpmI CTGGAG 3 cut(s) 537, 622, 834
Bpu10I CCTNAGC 1 cut(s) 488
Bpu1102I GCTNAGC 2 cut(s) 108, 1521
BpuEI CTTGAG 3 cut(s) 232, 413, 1162
BpuMI CCSGG 1 cut(s) 748
Bsa29I ATCGAT 1 cut(s) 41
BsaBI GATNNNNATC 2 cut(s) 206, 276
BsaI GGTCTC 2 cut(s) 417, 1037
BsaJI CCNNGG 4 cut(s) 746, 806, 827, 1047
BsaXI ACNNNNNCTCC 2 cut(s) 595, 625
Bsc4I CCNNNNNNNGG 1 cut(s) 93
Bse1I ACTGG 2 cut(s) 996, 1461
Bse3DI GCAATG 1 cut(s) 469
Bse8I GATNNNNATC 2 cut(s) 206, 276
BseBI CCWGG 2 cut(s) 726, 1113
BseCI ATCGAT 1 cut(s) 41
BseDI CCNNGG 4 cut(s) 746, 806, 827, 1047
BseGI GGATG 8 cut(s) 10, 226, 237, 355, 756, 783, 1069, 1198
BseJI GATNNNNATC 2 cut(s) 206, 276
BseLI CCNNNNNNNGG 1 cut(s) 93
BseMI GCAATG 1 cut(s) 469
BseMII CTCAG 7 cut(s) 99, 479, 780, 1023, 1336, 1496, 1535
BseNI ACTGG 2 cut(s) 996, 1461
BseRI GAGGAG 4 cut(s) 197, 208, 837, 899
BseSI GKGCMC 1 cut(s) 1272
BseXI GCAGC 3 cut(s) 1317, 1397, 1495
BsgI GTGCAG 1 cut(s) 1306
BshFI GGCC 2 cut(s) 486, 585
BshVI ATCGAT 1 cut(s) 41
BsiHKCI CYCGRG 3 cut(s) 1025, 1191, 1437
BsiSI CCGG 2 cut(s) 748, 796
BslFI GGGAC 2 cut(s) 652, 1454
BslI CCNNNNNNNGG 1 cut(s) 93
BsmAI GTCTC 7 cut(s) 208, 248, 254, 417, 1037, 1194, 1350
BsmBI CGTCTC 2 cut(s) 248, 1350
BsmFI GGGAC 2 cut(s) 652, 1454
BsnI GGCC 2 cut(s) 486, 585
Bso31I GGTCTC 2 cut(s) 417, 1037
BsoBI CYCGRG 3 cut(s) 1025, 1191, 1437
Bsp1286I GDGCHC 3 cut(s) 1177, 1198, 1272
Bsp143I GATC 7 cut(s) 8, 144, 201, 741, 792, 1145, 1498
Bsp1720I GCTNAGC 2 cut(s) 108, 1521
Bsp19I CCATGG 1 cut(s) 1047
BspACI CCGC 2 cut(s) 549, 946
BspANI GGCC 2 cut(s) 486, 585
BspCNI CTCAG 7 cut(s) 100, 480, 781, 1024, 1335, 1495, 1534
BspDI ATCGAT 1 cut(s) 41
BspLI GGNNCC 3 cut(s) 85, 812, 1296
BspPI GGATC 5 cut(s) 16, 139, 736, 787, 1506
BspQI GCTCTTC 1 cut(s) 633
BspTNI GGTCTC 2 cut(s) 417, 1037
BsrBI CCGCTC 1 cut(s) 551
BsrDI GCAATG 1 cut(s) 469
BsrI ACTGG 2 cut(s) 996, 1461
BssECI CCNNGG 4 cut(s) 746, 806, 827, 1047
BssMI GATC 7 cut(s) 8, 144, 201, 741, 792, 1145, 1498
BssT1I CCWWGG 2 cut(s) 806, 1047
Bst2UI CCWGG 2 cut(s) 726, 1113
Bst4CI ACNGT 2 cut(s) 859, 973
Bst6I CTCTTC 1 cut(s) 633
BstC8I GCNNGC 2 cut(s) 114, 583
BstDEI CTNAG 7 cut(s) 108, 488, 789, 1032, 1322, 1482, 1521
BstDSI CCRYGG 1 cut(s) 1047
BstENI CCTNNNNNAGG 1 cut(s) 91
BstF5I GGATG 8 cut(s) 10, 226, 237, 355, 756, 783, 1069, 1198
BstHHI GCGC 1 cut(s) 1310
BstKTI GATC 7 cut(s) 11, 147, 204, 744, 795, 1148, 1501
BstMAI GTCTC 7 cut(s) 208, 248, 254, 417, 1037, 1194, 1350
BstMBI GATC 7 cut(s) 8, 144, 201, 741, 792, 1145, 1498
BstMWI GCNNNNNNNGC 2 cut(s) 113, 1517
BstNI CCWGG 2 cut(s) 726, 1113
BstNSI RCATGY 1 cut(s) 116
BstPAI GACNNNNGTC 2 cut(s) 1186, 1220
BstSCI CCNGG 3 cut(s) 724, 746, 1111
BstSLI GKGCMC 1 cut(s) 1272
BstV1I GCAGC 3 cut(s) 1317, 1397, 1495
BstV2I GAAGAC 1 cut(s) 527
BstX2I RGATCY 4 cut(s) 144, 792, 1145, 1498
BstXI CCANNNNNNTGG 1 cut(s) 965
BstYI RGATCY 4 cut(s) 144, 792, 1145, 1498
Bsu15I ATCGAT 1 cut(s) 41
BsuRI GGCC 2 cut(s) 486, 585
BsuTUI ATCGAT 1 cut(s) 41
BtgI CCRYGG 1 cut(s) 1047
BtsCI GGATG 8 cut(s) 10, 226, 237, 355, 756, 783, 1069, 1198
BtsIMutI CAGTG 1 cut(s) 969
Cac8I GCNNGC 2 cut(s) 114, 583
CaiI CAGNNNCTG 1 cut(s) 857
CfoI GCGC 1 cut(s) 1310
Cfr13I GGNCC 2 cut(s) 584, 1478
ClaI ATCGAT 1 cut(s) 41
CseI GACGC 1 cut(s) 649
Csp6I GTAC 3 cut(s) 979, 1056, 1472
CviAII CATG 7 cut(s) 113, 172, 286, 409, 769, 1048, 1279
CviQI GTAC 3 cut(s) 979, 1056, 1472
DdeI CTNAG 7 cut(s) 108, 488, 789, 1032, 1322, 1482, 1521
DpnI GATC 7 cut(s) 10, 146, 203, 743, 794, 1147, 1500
DpnII GATC 7 cut(s) 8, 144, 201, 741, 792, 1145, 1498
Eam1104I CTCTTC 1 cut(s) 633
EarI CTCTTC 1 cut(s) 633
Eco130I CCWWGG 2 cut(s) 806, 1047
Eco24I GRGCYC 2 cut(s) 1177, 1198
Eco31I GGTCTC 2 cut(s) 417, 1037
Eco47I GGWCC 1 cut(s) 1478
Eco57I CTGAAG 2 cut(s) 609, 1169
Eco88I CYCGRG 3 cut(s) 1025, 1191, 1437
EcoNI CCTNNNNNAGG 1 cut(s) 91
EcoO109I RGGNCCY 1 cut(s) 1478
EcoRII CCWGG 2 cut(s) 724, 1111
EcoT14I CCWWGG 2 cut(s) 806, 1047
EcoT22I ATGCAT 3 cut(s) 118, 228, 1071
EcoT38I GRGCYC 2 cut(s) 1177, 1198
ErhI CCWWGG 2 cut(s) 806, 1047
Esp3I CGTCTC 2 cut(s) 248, 1350
FaeI CATG 7 cut(s) 116, 175, 289, 412, 772, 1051, 1282
FalI AAGNNNNNCTT 4 cut(s) 807, 839, 1072, 1104
FaqI GGGAC 2 cut(s) 652, 1454
FatI CATG 7 cut(s) 112, 171, 285, 408, 768, 1047, 1278
Fnu4HI GCNGC 4 cut(s) 549, 1306, 1386, 1509
FokI GGATG 8 cut(s) 17, 213, 224, 362, 763, 770, 1056, 1185
FriOI GRGCYC 2 cut(s) 1177, 1198
Fsp4HI GCNGC 4 cut(s) 549, 1306, 1386, 1509
FspBI CTAG 3 cut(s) 711, 732, 1014
GlaI GCGC 1 cut(s) 1309
GluI GCNGC 4 cut(s) 549, 1306, 1386, 1509
GsuI CTGGAG 3 cut(s) 537, 622, 834
HaeIII GGCC 2 cut(s) 486, 585
HapII CCGG 2 cut(s) 748, 796
HgaI GACGC 1 cut(s) 649
HhaI GCGC 1 cut(s) 1310
Hin1II CATG 7 cut(s) 116, 175, 289, 412, 772, 1051, 1282
Hin6I GCGC 1 cut(s) 1308
HinP1I GCGC 1 cut(s) 1308
HincII GTYRAC 1 cut(s) 763
HindII GTYRAC 1 cut(s) 763
HindIII AAGCTT 1 cut(s) 59
HinfI GANTC 8 cut(s) 38, 43, 262, 452, 889, 938, 1361, 1530
HpaII CCGG 2 cut(s) 748, 796
HphI GGTGA 3 cut(s) 109, 317, 1083
Hpy166II GTNNAC 3 cut(s) 298, 418, 763
Hpy188I TCNGA 4 cut(s) 828, 987, 1529, 1538
Hpy8I GTNNAC 3 cut(s) 298, 418, 763
Hpy99I CGWCG 1 cut(s) 159
HpyAV CCTTC 2 cut(s) 325, 1046
HpyCH4III ACNGT 2 cut(s) 859, 973
HpyCH4IV ACGT 1 cut(s) 977
HpyF10VI GCNNNNNNNGC 2 cut(s) 113, 1517
HpyF3I CTNAG 7 cut(s) 108, 488, 789, 1032, 1322, 1482, 1521
HpySE526I ACGT 1 cut(s) 977
Hsp92II CATG 7 cut(s) 116, 175, 289, 412, 772, 1051, 1282
HspAI GCGC 1 cut(s) 1308
Kzo9I GATC 7 cut(s) 8, 144, 201, 741, 792, 1145, 1498
LguI GCTCTTC 1 cut(s) 633
LmnI GCTCC 4 cut(s) 556, 603, 948, 1530
Lsp1109I GCAGC 3 cut(s) 1317, 1397, 1495
LweI GCATC 4 cut(s) 235, 741, 1078, 1323
MaeI CTAG 3 cut(s) 711, 732, 1014
MaeII ACGT 1 cut(s) 977
MaeIII GTNAC 3 cut(s) 778, 973, 1325
MalI GATC 7 cut(s) 10, 146, 203, 743, 794, 1147, 1500
MbiI CCGCTC 1 cut(s) 551
MboI GATC 7 cut(s) 8, 144, 201, 741, 792, 1145, 1498
MboII GAAGA 7 cut(s) 112, 532, 620, 694, 815, 1270, 1273
MflI RGATCY 4 cut(s) 144, 792, 1145, 1498
MhlI GDGCHC 3 cut(s) 1177, 1198, 1272
MluCI AATT 4 cut(s) 52, 541, 561, 1419
MlyI GAGTC 4 cut(s) 256, 446, 1370, 1539
MmeI TCCRAC 1 cut(s) 1235
Mph1103I ATGCAT 3 cut(s) 118, 228, 1071
MroXI GAANNNNTTC 2 cut(s) 42, 663
MseI TTAA 2 cut(s) 678, 1392
MslI CAYNNNNRTG 2 cut(s) 176, 1203
MspA1I CMGCKG 1 cut(s) 1388
MspI CCGG 2 cut(s) 748, 796
MspR9I CCNGG 3 cut(s) 726, 748, 1113
MvaI CCWGG 2 cut(s) 726, 1113
MwoI GCNNNNNNNGC 2 cut(s) 113, 1517
NciI CCSGG 1 cut(s) 748
NcoI CCATGG 1 cut(s) 1047
NdeII GATC 7 cut(s) 8, 144, 201, 741, 792, 1145, 1498
NlaIII CATG 7 cut(s) 116, 175, 289, 412, 772, 1051, 1282
NlaIV GGNNCC 3 cut(s) 85, 812, 1296
NmuCI GTSAC 1 cut(s) 973
NsiI ATGCAT 3 cut(s) 118, 228, 1071
NspI RCATGY 1 cut(s) 116
PaeI GCATGC 1 cut(s) 116
PciSI GCTCTTC 1 cut(s) 633
PdmI GAANNNNTTC 2 cut(s) 42, 663
PfeI GAWTC 4 cut(s) 38, 43, 889, 938
PfoI TCCNGGA 1 cut(s) 1111
PkrI GCNGC 4 cut(s) 550, 1307, 1387, 1510
PleI GAGTC 4 cut(s) 256, 446, 1369, 1538
PpsI GAGTC 4 cut(s) 256, 446, 1369, 1538
PpuMI RGGWCCY 1 cut(s) 1478
PshAI GACNNNNGTC 2 cut(s) 1186, 1220
Psp5II RGGWCCY 1 cut(s) 1478
Psp6I CCWGG 2 cut(s) 724, 1111
PspGI CCWGG 2 cut(s) 724, 1111
PspN4I GGNNCC 3 cut(s) 85, 812, 1296
PspPI GGNCC 2 cut(s) 584, 1478
PspPPI RGGWCCY 1 cut(s) 1478
PstNI CAGNNNCTG 1 cut(s) 857
PsuI RGATCY 4 cut(s) 144, 792, 1145, 1498
PvuII CAGCTG 1 cut(s) 1388
RsaI GTAC 3 cut(s) 980, 1057, 1473
RsaNI GTAC 3 cut(s) 979, 1056, 1472
RseI CAYNNNNRTG 2 cut(s) 176, 1203
SapI GCTCTTC 1 cut(s) 633
SaqAI TTAA 2 cut(s) 678, 1392
SatI GCNGC 4 cut(s) 549, 1306, 1386, 1509
Sau3AI GATC 7 cut(s) 8, 144, 201, 741, 792, 1145, 1498
Sau96I GGNCC 2 cut(s) 584, 1478
SchI GAGTC 4 cut(s) 256, 446, 1370, 1539
ScrFI CCNGG 3 cut(s) 726, 748, 1113
SduI GDGCHC 3 cut(s) 1177, 1198, 1272
SfaNI GCATC 4 cut(s) 235, 741, 1078, 1323
SinI GGWCC 1 cut(s) 1478
SmiMI CAYNNNNRTG 2 cut(s) 176, 1203
SmlI CTYRAG 3 cut(s) 211, 428, 1141
SmoI CTYRAG 3 cut(s) 211, 428, 1141
SphI GCATGC 1 cut(s) 116
Sse9I AATT 4 cut(s) 52, 541, 561, 1419
SsiI CCGC 2 cut(s) 549, 946
SspMI CTAG 3 cut(s) 711, 732, 1014
StyD4I CCNGG 3 cut(s) 724, 746, 1111
StyI CCWWGG 2 cut(s) 806, 1047
TaaI ACNGT 2 cut(s) 859, 973
TaiI ACGT 1 cut(s) 980
TaqI TCGA 4 cut(s) 41, 403, 936, 1331
TasI AATT 4 cut(s) 52, 541, 561, 1419
TatI WGTACW 1 cut(s) 1471
TauI GCSGC 1 cut(s) 551
TfiI GAWTC 4 cut(s) 38, 43, 889, 938
Tru1I TTAA 2 cut(s) 678, 1392
Tru9I TTAA 2 cut(s) 678, 1392
TscAI CASTG 1 cut(s) 976
TseFI GTSAC 1 cut(s) 973
TseI GCWGC 3 cut(s) 1305, 1385, 1508
Tsp45I GTSAC 1 cut(s) 973
TspDTI ATGAA 3 cut(s) 672, 785, 1295
TspGWI ACGGA 3 cut(s) 230, 995, 1232
TspRI CASTG 1 cut(s) 976
VpaK11BI GGWCC 1 cut(s) 1478
XagI CCTNNNNNAGG 1 cut(s) 91
XapI RAATTY 1 cut(s) 1419
XceI RCATGY 1 cut(s) 116
XcmI CCANNNNNNNNNTGG 1 cut(s) 722
XmnI GAANNNNTTC 2 cut(s) 42, 663
XspI CTAG 3 cut(s) 711, 732, 1014
Zsp2I ATGCAT 3 cut(s) 118, 228, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.