RchiOBHm_Chr2g0167051

SNF1-related protein kinase catalytic subunit alpha

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0005352
Physical Location & Seq
Forward (+)
81714581 .. 81719949
5369 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53487

Sequence Viewer

Length: 1557 bp
ATGGATGGACCGGTTGGCCGTGGAGGCAGCAGTGCAGATGCATATTTACCGAATTACAAGCTTGGAAAAACTCTTGGTATTGGTTCTTTTGGCAAGGTCAAAATTGCAGAGCATGCATTAACTGGCCACAAAGTTGCTATCAAGATCCTTAACCGGCGCAAGATAAAGAACATGGAAATGGAAGAGAAAGTGAGAAGAGAAATCAAAATATTAAGACTGTTTATGCACCCTCACATTATACGACTCTATGAGGTCATTGAAACACCATCGGACATTTATGTTGTGATGGAGTATGTAAAGTCTGGGGAGCTTTTTGATTATATAGTAGAGAAGGGTAGGCTACAGGAGGATGAAGCTCGTAACTTTTTTCAGCAGATAATATCTGGCGTGGAGTACTGTCACAGGAATATGGTTGTTCATAGAGACCTGAAGCCAGAAAATTTGCTTTTGGATTCCAAATGCAATGTGAAGATTGCTGATTTTGGCCTAAGCAATATTATGCGTGATGGCCATTTTCTTAAGACAAGTTGTGGCAGCCCAAATTATGCTGCTCCAGAGGTTATTTCTGGTAAACTATATGCTGGACCCGAAGTAGATGTATGGAGTTGTGGAGTGATATTATATGCTCTTCTTTGTGGTACTCTTCCTTTTGACGATGAGAACATTCCCAACTTGTTCAAGAAAATTAAGGGCGGGATATACACTCTTCCAAGCCATTTATCACCTGGTGCAAGGGACTTAATCCCAAGAATGCTCGTGGTGGATCCAATGAAGCGAATGACCATCCCTGAGATTCGTCAGCATCCATGGTTCCAGGCTCATCTTCCTCGTTACTTAGCTGTGCCCCCACCAGATACAATGCAGCAAGCGAAGAAGATTGATGAAGAAATCTTACAGGAAGTAGTGAAGATGGGATTTGACAGGAACCATCTGGTTGAATCTCTGCGTGGTAGATTACAAAATGAGGGAACCGTTGCATACTATTTATTATTGGACAACCGGTTTCGTGTATCCAGTGGCTATCTTGGGGCCGAGTTTCAGGAGACTGTGGAATCTGGTTTCAACCGTATGCATCAAAGTGAGCCTGCTTCTTCACCTGTTGGGCACCGCCTTCCAGGATATATGGAGTATCAAGGAATGGGCTCTTCACCTTTTAGACAACAGTTTCCTGTTGAAAGGAAATGGGCTCTTGGACTTCAGTCTCGGGCTCATCCTCGTGAAATAATGACCGAAGTCCTTAAAGCTTTACAAGAATTGCGGGTGTGTTGGAAGAAGATAGGACACTACAACATGAAGTGTAGGTGGGTTCCTGGCACTCCTGGTCAACATGAAGGCATGGTTGACAATCCTGTAAACAATAACCATTATTTTGGGGACGAATCCAGCATCATAGAAAATGATGGCGTTATGAAGACGCCCAATGTTGTCAAGTTTGAAGTGCAGCTTTTCAAAACTCGGGAGGAGAAGTATCTGCTTGATCTGCAGAGGGTCCAGGGTCCGCAGTTTCTCTTCCTGGATCTCTGTGCCGCTTTCCTTGCACAGCTTCGTGTTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007584 GO:0008150 GO:0008152 GO:0009593 GO:0009594 GO:0009605 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009743 GO:0009755 GO:0009756 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010050 GO:0010150 GO:0010182 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023052 GO:0031667 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071396 GO:0071495 GO:0071704 GO:0080022 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418
Pfam Domains
Protein Families
KA1 Pkinase UBA

Protein Analysis

518

Amino Acids

59.19

Weight (kDa)

8.57

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 19 - 271 4.9e-83 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 20 - 267 4.1e-41 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 119 - 219 5.9e-07 Kinase-like
UBA PF00627 293 - 329 2e-07 UBA/TS-N domain
KA1 PF02149 475 - 517 3.2e-13 Kinase associated domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1104
AciI CCGC 5 cut(s) 693, 1108, 1258, 1499, 1527
AclWI GGATC 4 cut(s) 139, 758, 771, 1524
AcoI YGGCCR 3 cut(s) 16, 124, 508
AcsI RAATTY 1 cut(s) 439
AcuI CTGAAG 2 cut(s) 449, 1181
AcyI GRCGYC 1 cut(s) 1415
AdeI CACNNNGTG 1 cut(s) 728
AfaI GTAC 2 cut(s) 395, 640
AflII CTTAAG 1 cut(s) 518
AgeI ACCGGT 2 cut(s) 10, 999
AgsI TTSAA 7 cut(s) 260, 679, 938, 1063, 1175, 1436, 1450
AjnI CCWGG 7 cut(s) 724, 813, 1114, 1309, 1318, 1491, 1512
AluBI AGCT 7 cut(s) 61, 310, 356, 839, 1244, 1444, 1543
AluI AGCT 7 cut(s) 61, 310, 356, 839, 1244, 1444, 1543
Alw26I GTCTC 3 cut(s) 417, 1037, 1206
AlwI GGATC 4 cut(s) 139, 758, 771, 1524
Ama87I CYCGRG 2 cut(s) 1203, 1455
AoxI GGCC 5 cut(s) 16, 124, 484, 508, 1029
ApeKI GCWGC 5 cut(s) 27, 534, 548, 862, 1441
ApoI RAATTY 1 cut(s) 439
AsiGI ACCGGT 2 cut(s) 10, 999
AspLEI GCGC 1 cut(s) 159
AspS9I GGNCC 5 cut(s) 8, 584, 1029, 1489, 1496
AsuHPI GGTGA 3 cut(s) 714, 1086, 1140
AvaI CYCGRG 2 cut(s) 1203, 1455
AvaII GGWCC 4 cut(s) 8, 584, 1489, 1496
BaeGI GKGCMC 2 cut(s) 846, 1107
BalI TGGCCA 2 cut(s) 126, 510
BamHI GGATCC 1 cut(s) 763
BanI GGYRCC 1 cut(s) 1104
BanII GRGCYC 3 cut(s) 1145, 1189, 1210
BarI GAAGNNNNNNTAC 2 cut(s) 876, 908
BauI CACGAG 2 cut(s) 755, 1215
BbsI GAAGAC 1 cut(s) 1418
BbvI GCAGC 5 cut(s) 39, 535, 546, 874, 1453
BccI CCATC 7 cut(s) 274, 280, 500, 791, 904, 936, 1394
BceAI ACGGC 1 cut(s) 3
BciT130I CCWGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
BciVI GTATCC 1 cut(s) 1021
BcoDI GTCTC 3 cut(s) 417, 1037, 1206
BfmI CTRYAG 2 cut(s) 341, 1481
BfrI CTTAAG 1 cut(s) 518
BfuI GTATCC 1 cut(s) 1021
BglI GCCNNNNNGGC 1 cut(s) 24
BisI GCNGC 6 cut(s) 28, 535, 549, 863, 1442, 1527
BlsI GCNGC 6 cut(s) 29, 536, 550, 864, 1443, 1528
BmcAI AGTACT 1 cut(s) 395
Bme1390I CCNGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
Bme18I GGWCC 4 cut(s) 8, 584, 1489, 1496
BmeT110I CYCGRG 2 cut(s) 1203, 1455
BmgT120I GGNCC 5 cut(s) 8, 584, 1029, 1489, 1496
BmrFI CCNGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
BmsI GCATC 4 cut(s) 28, 811, 1081, 1395
BoxI GACNNNNGTC 2 cut(s) 1198, 1232
BpiI GAAGAC 1 cut(s) 1418
BpmI CTGGAG 1 cut(s) 537
Bpu10I CCTNAGC 1 cut(s) 488
BsaHI GRCGYC 1 cut(s) 1415
BsaI GGTCTC 1 cut(s) 417
BsaJI CCNNGG 3 cut(s) 19, 806, 1492
BsaWI WCCGGW 2 cut(s) 10, 999
BsaXI ACNNNNNCTCC 2 cut(s) 1451, 1481
Bse118I RCCGGY 3 cut(s) 10, 153, 999
Bse1I ACTGG 2 cut(s) 127, 1014
Bse3DI GCAATG 1 cut(s) 469
BseBI CCWGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
BseDI CCNNGG 3 cut(s) 19, 806, 1492
BseGI GGATG 5 cut(s) 10, 355, 783, 802, 1210
BseMI GCAATG 1 cut(s) 469
BseMII CTCAG 1 cut(s) 780
BseNI ACTGG 2 cut(s) 127, 1014
BseRI GAGGAG 1 cut(s) 1475
BseSI GKGCMC 2 cut(s) 846, 1107
BseXI GCAGC 5 cut(s) 39, 535, 546, 874, 1453
BsgI GTGCAG 2 cut(s) 54, 1460
BshFI GGCC 5 cut(s) 18, 126, 486, 510, 1031
BshNI GGYRCC 1 cut(s) 1104
BshTI ACCGGT 2 cut(s) 10, 999
BsiHKCI CYCGRG 2 cut(s) 1203, 1455
BsiSI CCGG 3 cut(s) 11, 154, 1000
BslFI GGGAC 2 cut(s) 749, 1388
BsmAI GTCTC 3 cut(s) 417, 1037, 1206
BsmFI GGGAC 2 cut(s) 749, 1388
BsmI GAATGC 1 cut(s) 756
BsnI GGCC 5 cut(s) 18, 126, 486, 510, 1031
Bso31I GGTCTC 1 cut(s) 417
BsoBI CYCGRG 2 cut(s) 1203, 1455
Bsp1286I GDGCHC 5 cut(s) 846, 1107, 1145, 1189, 1210
Bsp143I GATC 4 cut(s) 144, 763, 1477, 1516
Bsp19I CCATGG 1 cut(s) 806
BspACI CCGC 5 cut(s) 693, 1108, 1258, 1499, 1527
BspANI GGCC 5 cut(s) 18, 126, 486, 510, 1031
BspCNI CTCAG 1 cut(s) 781
BspMAI CTGCAG 1 cut(s) 1485
BspPI GGATC 4 cut(s) 139, 758, 771, 1524
BspQI GCTCTTC 2 cut(s) 633, 1150
BspT107I GGYRCC 1 cut(s) 1104
BspTI CTTAAG 1 cut(s) 518
BspTNI GGTCTC 1 cut(s) 417
BsrDI GCAATG 1 cut(s) 469
BsrFI RCCGGY 3 cut(s) 10, 153, 999
BsrI ACTGG 2 cut(s) 127, 1014
BssAI RCCGGY 3 cut(s) 10, 153, 999
BssECI CCNNGG 3 cut(s) 19, 806, 1492
BssMI GATC 4 cut(s) 144, 763, 1477, 1516
BssNI GRCGYC 1 cut(s) 1415
BssSI CACGAG 2 cut(s) 755, 1215
BssT1I CCWWGG 1 cut(s) 806
Bst2BI CACGAG 2 cut(s) 755, 1215
Bst2UI CCWGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
Bst4CI ACNGT 6 cut(s) 219, 398, 973, 1048, 1067, 1164
Bst6I CTCTTC 7 cut(s) 177, 190, 633, 648, 711, 1150, 1514
BstACI GRCGYC 1 cut(s) 1415
BstAFI CTTAAG 1 cut(s) 518
BstAPI GCANNNNNTGC 1 cut(s) 113
BstC8I GCNNGC 3 cut(s) 114, 867, 1086
BstDEI CTNAG 3 cut(s) 488, 789, 835
BstDSI CCRYGG 2 cut(s) 19, 806
BstF5I GGATG 5 cut(s) 10, 355, 783, 802, 1210
BstHHI GCGC 1 cut(s) 159
BstKTI GATC 4 cut(s) 147, 766, 1480, 1519
BstMAI GTCTC 3 cut(s) 417, 1037, 1206
BstMBI GATC 4 cut(s) 144, 763, 1477, 1516
BstMWI GCNNNNNNNGC 4 cut(s) 24, 113, 1480, 1535
BstNI CCWGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
BstNSI RCATGY 1 cut(s) 116
BstPAI GACNNNNGTC 2 cut(s) 1198, 1232
BstSCI CCNGG 7 cut(s) 724, 813, 1114, 1309, 1318, 1491, 1512
BstSFI CTRYAG 2 cut(s) 341, 1481
BstSLI GKGCMC 2 cut(s) 846, 1107
BstV1I GCAGC 5 cut(s) 39, 535, 546, 874, 1453
BstV2I GAAGAC 1 cut(s) 1418
BstX2I RGATCY 3 cut(s) 144, 763, 1516
BstXI CCANNNNNNTGG 1 cut(s) 1370
BstYI RGATCY 3 cut(s) 144, 763, 1516
BsuI GTATCC 1 cut(s) 1021
BsuRI GGCC 5 cut(s) 18, 126, 486, 510, 1031
BtgI CCRYGG 2 cut(s) 19, 806
BtsCI GGATG 5 cut(s) 10, 355, 783, 802, 1210
BtsI GCAGTG 1 cut(s) 37
BtsIMutI CAGTG 2 cut(s) 37, 1021
Cac8I GCNNGC 3 cut(s) 114, 867, 1086
CfoI GCGC 1 cut(s) 159
Cfr10I RCCGGY 3 cut(s) 10, 153, 999
Cfr13I GGNCC 5 cut(s) 8, 584, 1029, 1489, 1496
CseI GACGC 1 cut(s) 1423
CsiI ACCWGGT 1 cut(s) 724
Csp6I GTAC 2 cut(s) 394, 639
CspAI ACCGGT 2 cut(s) 10, 999
CviAII CATG 6 cut(s) 113, 172, 807, 1291, 1328, 1336
CviQI GTAC 2 cut(s) 394, 639
DdeI CTNAG 3 cut(s) 488, 789, 835
DpnI GATC 4 cut(s) 146, 765, 1479, 1518
DpnII GATC 4 cut(s) 144, 763, 1477, 1516
DraIII CACNNNGTG 1 cut(s) 728
EaeI YGGCCR 3 cut(s) 16, 124, 508
Eam1104I CTCTTC 7 cut(s) 177, 190, 633, 648, 711, 1150, 1514
EarI CTCTTC 7 cut(s) 177, 190, 633, 648, 711, 1150, 1514
Eco130I CCWWGG 1 cut(s) 806
Eco24I GRGCYC 3 cut(s) 1145, 1189, 1210
Eco31I GGTCTC 1 cut(s) 417
Eco47I GGWCC 4 cut(s) 8, 584, 1489, 1496
Eco57I CTGAAG 2 cut(s) 449, 1181
Eco88I CYCGRG 2 cut(s) 1203, 1455
EcoRII CCWGG 7 cut(s) 724, 813, 1114, 1309, 1318, 1491, 1512
EcoT14I CCWWGG 1 cut(s) 806
EcoT22I ATGCAT 3 cut(s) 43, 118, 1074
EcoT38I GRGCYC 3 cut(s) 1145, 1189, 1210
ErhI CCWWGG 1 cut(s) 806
FaeI CATG 6 cut(s) 116, 175, 810, 1294, 1331, 1339
FalI AAGNNNNNCTT 2 cut(s) 1428, 1460
FaqI GGGAC 2 cut(s) 749, 1388
FatI CATG 6 cut(s) 112, 171, 806, 1290, 1327, 1335
FauI CCCGC 2 cut(s) 686, 1251
Fnu4HI GCNGC 6 cut(s) 28, 535, 549, 863, 1442, 1527
FokI GGATG 5 cut(s) 17, 362, 770, 789, 1197
FriOI GRGCYC 3 cut(s) 1145, 1189, 1210
Fsp4HI GCNGC 6 cut(s) 28, 535, 549, 863, 1442, 1527
GlaI GCGC 1 cut(s) 158
GluI GCNGC 6 cut(s) 28, 535, 549, 863, 1442, 1527
GsuI CTGGAG 1 cut(s) 537
HaeIII GGCC 5 cut(s) 18, 126, 486, 510, 1031
HapII CCGG 3 cut(s) 11, 154, 1000
HgaI GACGC 1 cut(s) 1423
HhaI GCGC 1 cut(s) 159
Hin1I GRCGYC 1 cut(s) 1415
Hin1II CATG 6 cut(s) 116, 175, 810, 1294, 1331, 1339
Hin6I GCGC 1 cut(s) 157
HinP1I GCGC 1 cut(s) 157
HincII GTYRAC 2 cut(s) 1325, 1342
HindII GTYRAC 2 cut(s) 1325, 1342
HindIII AAGCTT 2 cut(s) 59, 1242
HinfI GANTC 6 cut(s) 243, 452, 793, 938, 1052, 1379
HpaII CCGG 3 cut(s) 11, 154, 1000
HphI GGTGA 3 cut(s) 714, 1086, 1140
Hpy166II GTNNAC 4 cut(s) 572, 1325, 1342, 1354
Hpy188I TCNGA 1 cut(s) 271
Hpy188III TCNNGA 6 cut(s) 142, 554, 679, 1040, 1217, 1457
Hpy8I GTNNAC 4 cut(s) 572, 1325, 1342, 1354
HpyAV CCTTC 3 cut(s) 325, 1121, 1325
HpyCH4III ACNGT 6 cut(s) 219, 398, 973, 1048, 1067, 1164
HpyF10VI GCNNNNNNNGC 4 cut(s) 24, 113, 1480, 1535
HpyF3I CTNAG 3 cut(s) 488, 789, 835
Hsp92I GRCGYC 1 cut(s) 1415
Hsp92II CATG 6 cut(s) 116, 175, 810, 1294, 1331, 1339
HspAI GCGC 1 cut(s) 157
Kzo9I GATC 4 cut(s) 144, 763, 1477, 1516
LguI GCTCTTC 2 cut(s) 633, 1150
LmnI GCTCC 2 cut(s) 307, 556
Lsp1109I GCAGC 5 cut(s) 39, 535, 546, 874, 1453
LweI GCATC 4 cut(s) 28, 811, 1081, 1395
MabI ACCWGGT 1 cut(s) 724
MaeIII GTNAC 3 cut(s) 359, 398, 830
MalI GATC 4 cut(s) 146, 765, 1479, 1518
MboI GATC 4 cut(s) 144, 763, 1477, 1516
MflI RGATCY 3 cut(s) 144, 763, 1516
MhlI GDGCHC 5 cut(s) 846, 1107, 1145, 1189, 1210
MlsI TGGCCA 2 cut(s) 126, 510
MluCI AATT 6 cut(s) 52, 102, 439, 541, 684, 1253
MluNI TGGCCA 2 cut(s) 126, 510
MlyI GAGTC 1 cut(s) 237
MmeI TCCRAC 1 cut(s) 1247
Mox20I TGGCCA 2 cut(s) 126, 510
Mph1103I ATGCAT 3 cut(s) 43, 118, 1074
MscI TGGCCA 2 cut(s) 126, 510
MseI TTAA 8 cut(s) 119, 150, 212, 519, 687, 740, 1239, 1555
MslI CAYNNNNRTG 3 cut(s) 176, 1077, 1215
Msp20I TGGCCA 2 cut(s) 126, 510
MspCI CTTAAG 1 cut(s) 518
MspI CCGG 3 cut(s) 11, 154, 1000
MspR9I CCNGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
Mva1269I GAATGC 1 cut(s) 756
MvaI CCWGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
MwoI GCNNNNNNNGC 4 cut(s) 24, 113, 1480, 1535
NcoI CCATGG 1 cut(s) 806
NdeII GATC 4 cut(s) 144, 763, 1477, 1516
NlaIII CATG 6 cut(s) 116, 175, 810, 1294, 1331, 1339
NmeAIII GCCGAG 1 cut(s) 1057
NmuCI GTSAC 1 cut(s) 398
NsiI ATGCAT 3 cut(s) 43, 118, 1074
NspI RCATGY 1 cut(s) 116
PaeI GCATGC 1 cut(s) 116
PciSI GCTCTTC 2 cut(s) 633, 1150
PctI GAATGC 1 cut(s) 756
PfeI GAWTC 5 cut(s) 452, 793, 938, 1052, 1379
PfoI TCCNGGA 2 cut(s) 1114, 1512
PinAI ACCGGT 2 cut(s) 10, 999
PkrI GCNGC 6 cut(s) 29, 536, 550, 864, 1443, 1528
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
PshAI GACNNNNGTC 2 cut(s) 1198, 1232
Psp6I CCWGG 7 cut(s) 724, 813, 1114, 1309, 1318, 1491, 1512
PspGI CCWGG 7 cut(s) 724, 813, 1114, 1309, 1318, 1491, 1512
PspPI GGNCC 5 cut(s) 8, 584, 1029, 1489, 1496
PstI CTGCAG 1 cut(s) 1485
PsuI RGATCY 3 cut(s) 144, 763, 1516
RsaI GTAC 2 cut(s) 395, 640
RsaNI GTAC 2 cut(s) 394, 639
RseI CAYNNNNRTG 3 cut(s) 176, 1077, 1215
SapI GCTCTTC 2 cut(s) 633, 1150
SaqAI TTAA 8 cut(s) 119, 150, 212, 519, 687, 740, 1239, 1555
SatI GCNGC 6 cut(s) 28, 535, 549, 863, 1442, 1527
Sau3AI GATC 4 cut(s) 144, 763, 1477, 1516
Sau96I GGNCC 5 cut(s) 8, 584, 1029, 1489, 1496
ScaI AGTACT 1 cut(s) 395
SchI GAGTC 1 cut(s) 237
ScrFI CCNGG 7 cut(s) 726, 815, 1116, 1311, 1320, 1493, 1514
SduI GDGCHC 5 cut(s) 846, 1107, 1145, 1189, 1210
SexAI ACCWGGT 1 cut(s) 724
SfaNI GCATC 4 cut(s) 28, 811, 1081, 1395
SfcI CTRYAG 2 cut(s) 341, 1481
SinI GGWCC 4 cut(s) 8, 584, 1489, 1496
SmiMI CAYNNNNRTG 3 cut(s) 176, 1077, 1215
SmlI CTYRAG 1 cut(s) 518
SmoI CTYRAG 1 cut(s) 518
SphI GCATGC 1 cut(s) 116
Sse9I AATT 6 cut(s) 52, 102, 439, 541, 684, 1253
SsiI CCGC 5 cut(s) 693, 1108, 1258, 1499, 1527
SspI AATATT 2 cut(s) 210, 496
StyD4I CCNGG 7 cut(s) 724, 813, 1114, 1309, 1318, 1491, 1512
StyI CCWWGG 1 cut(s) 806
TaaI ACNGT 6 cut(s) 219, 398, 973, 1048, 1067, 1164
TaqII GACCGA 1 cut(s) 1244
TasI AATT 6 cut(s) 52, 102, 439, 541, 684, 1253
TatI WGTACW 1 cut(s) 393
TauI GCSGC 1 cut(s) 1529
TfiI GAWTC 5 cut(s) 452, 793, 938, 1052, 1379
Tru1I TTAA 8 cut(s) 119, 150, 212, 519, 687, 740, 1239, 1555
Tru9I TTAA 8 cut(s) 119, 150, 212, 519, 687, 740, 1239, 1555
TscAI CASTG 2 cut(s) 37, 1021
TseFI GTSAC 1 cut(s) 398
TseI GCWGC 5 cut(s) 27, 534, 548, 862, 1441
Tsp45I GTSAC 1 cut(s) 398
TspDTI ATGAA 7 cut(s) 366, 407, 785, 897, 1307, 1344, 1424
TspRI CASTG 2 cut(s) 37, 1021
Vha464I CTTAAG 1 cut(s) 518
VpaK11BI GGWCC 4 cut(s) 8, 584, 1489, 1496
XapI RAATTY 1 cut(s) 439
XceI RCATGY 1 cut(s) 116
XcmI CCANNNNNNNNNTGG 1 cut(s) 722
ZrmI AGTACT 1 cut(s) 395
Zsp2I ATGCAT 3 cut(s) 43, 118, 1074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.