AT3G29160

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
11128620 .. 11132105
3486 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G29160.1

Sequence Viewer

Length: 1539 bp
ATGGATCATTCATCAAATAGATTTGGCAATAATGGAGTGGAATCGATTTTACCGAATTACAAGCTTGGTAAAACTCTTGGAATTGGGTCTTTTGGGAAGGTGAAAATAGCAGAGCATGTTGTCACAGGGCATAAGGTTGCTATCAAAATCCTTAATCGTCGTAAGATCAAGAACATGGAGATGGAAGAGAAAGTGAGGAGGGAGATTAAGATTCTACGGTTGTTTATGCATCCTCATATTATTCGGCAGTATGAGGTAATAGAGACCACGAGTGACATTTATGTTGTGATGGAGTATGTCAAGTCTGGAGAGCTCTTTGATTATATTGTTGAGAAAGGCAGATTACAAGAAGATGAGGCTCGTAACTTTTTCCAGCAGATAATATCTGGTGTAGAGTACTGCCATCGTAATATGGTTGTCCATAGAGACCTGAAGCCTGAGAATTTACTATTGGATTCGAGGTGTAATATTAAGATTGCAGACTTTGGGTTGAGTAATGTTATGCGGGATGGTCATTTTCTAAAGACGAGTTGTGGAAGCCCCAACTACGCTGCTCCCGAGGTTATATCAGGTAAATTATATGCTGGACCTGAAGTAGATGTATGGAGTTGCGGAGTTATATTGTACGCTCTATTATGCGGTACTCTTCCTTTTGATGATGAAAACATTCCCAACCTTTTCAAGAAAATTAAGGGTGGGATTTACACTCTTCCAAGTCATTTATCATCTGAGGCTAGAGACCTGATCCCAAGGATGCTTATAGTTGACCCGGTGAAACGAATCACCATTCCTGAGATCCGTCAACACCGTTGGTTCCAGACTCATCTCCCTCGTTATCTTGCTGTCTCTCCACCGGATACAGTAGAGCAGGCTAAAAAGATCAATGAGGAGATAGTTCAAGAAGTGGTTAACATGGGATTTGATAGAAACCAGGTTTTGGAATCTCTACGCAACAGAACACAAAACGATGCTACTGTTACATACTACCTGTTATTGGATAACCGGTTCCGTGTTCCAAGTGGCTATCTAGAATCCGAGTTTCAGGAGACAACAGACAGTGGTTCCAATCCTATGCGCACACCTGAAGCGGGCGCTTCACCTGTAGGCCACTGGATTCCTGCACATGTGGATCACTACGGGTTGGGAGCAAGATCACAAGTCCCTGTTGATCGAAAATGGGCTCTTGGACTTCAGTCTCATGCGCATCCTCGTGAAATCATGAATGAAGTTTTGAAAGCTCTTCAAGAACTCAATGTGTGTTGGAAGAAGATTGGTCACTACAACATGAAATGTCGATGGGTTCCTGGTTTAGCTGATGGTCAGAATACTATGGTCAACAATCAGCTGCACTTCAGAGATGAATCCAGCATCATTGAGGATGACTGTGCCATGACTTCACCCACTGTCATCAAATTTGAACTTCAGCTATACAAAGCCCGGGAAGAGAAGTACTTGCTGGATATACAGAGAGTTAACGGTCCGCAGTTTCTCTTCTTGGATCTATGCGCCGCCTTTCTTACAGAGCTTCGTGTGATCTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

512

Amino Acids

58.69

Weight (kDa)

7.02

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 20 - 272 1.4e-81 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 21 - 268 5.2e-41 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 119 - 221 1.3e-06 Kinase-like
UBA PF00627 294 - 330 3.3e-10 UBA/TS-N domain
KA1 PF02149 468 - 511 6.6e-14 Kinase associated domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 1076, 1203
AccB7I CCANNNNNTGG 1 cut(s) 937
AciI CCGC 6 cut(s) 505, 612, 639, 1088, 1481, 1509
AclWI GGATC 5 cut(s) 12, 739, 790, 1137, 1506
AcsI RAATTY 2 cut(s) 442, 1412
AcuI CTGAAG 6 cut(s) 452, 612, 1104, 1175, 1336, 1406
AfaI GTAC 4 cut(s) 398, 626, 643, 1451
AfiI CCNNNNNNNGG 3 cut(s) 937, 994, 1088
AflIII ACRYGT 1 cut(s) 1123
AgeI ACCGGT 1 cut(s) 1002
AgsI TTSAA 5 cut(s) 682, 899, 1234, 1244, 1418
AjnI CCWGG 2 cut(s) 930, 1303
AjuI GAANNNNNNNTTGG 2 cut(s) 434, 466
AloI GAACNNNNNNTCC 2 cut(s) 989, 1021
AluBI AGCT 7 cut(s) 64, 313, 1238, 1313, 1345, 1426, 1525
AluI AGCT 7 cut(s) 64, 313, 1238, 1313, 1345, 1426, 1525
Alw21I GWGCWC 1 cut(s) 315
Alw26I GTCTC 6 cut(s) 257, 420, 732, 850, 1040, 1200
AlwI GGATC 5 cut(s) 12, 739, 790, 1137, 1506
Ama87I CYCGRG 2 cut(s) 557, 1437
AoxI GGCC 1 cut(s) 1105
ApeKI GCWGC 2 cut(s) 551, 1345
ApoI RAATTY 2 cut(s) 442, 1412
AsiGI ACCGGT 1 cut(s) 1002
Asp700I GAANNNNTTC 1 cut(s) 666
AspLEI GCGC 4 cut(s) 1077, 1094, 1204, 1508
AspS9I GGNCC 2 cut(s) 587, 1478
AsuC2I CCSGG 3 cut(s) 770, 1438, 1439
AsuHPI GGTGA 5 cut(s) 112, 775, 784, 1089, 1389
AvaI CYCGRG 2 cut(s) 557, 1437
AvaII GGWCC 2 cut(s) 587, 1478
BanII GRGCYC 2 cut(s) 315, 1183
BauI CACGAG 2 cut(s) 268, 1209
Bbv12I GWGCWC 1 cut(s) 315
BbvI GCAGC 2 cut(s) 538, 1332
BccI CCATC 6 cut(s) 175, 283, 411, 503, 1290, 1310
BciT130I CCWGG 2 cut(s) 932, 1305
BciVI GTATCC 1 cut(s) 850
BcnI CCSGG 3 cut(s) 770, 1438, 1439
BcoDI GTCTC 6 cut(s) 257, 420, 732, 850, 1040, 1200
BfaI CTAG 2 cut(s) 735, 1028
BfmI CTRYAG 1 cut(s) 1101
BfoI RGCGCY 1 cut(s) 1095
BfuI GTATCC 1 cut(s) 850
BisI GCNGC 3 cut(s) 552, 1346, 1509
BlsI GCNGC 3 cut(s) 553, 1347, 1510
BmcAI AGTACT 2 cut(s) 398, 1451
Bme1390I CCNGG 5 cut(s) 770, 932, 1305, 1438, 1439
Bme18I GGWCC 2 cut(s) 587, 1478
BmeT110I CYCGRG 2 cut(s) 557, 1437
BmgT120I GGNCC 2 cut(s) 587, 1478
BmiI GGNNCC 4 cut(s) 815, 1007, 1063, 1302
BmrFI CCNGG 5 cut(s) 770, 932, 1305, 1438, 1439
BmsI GCATC 5 cut(s) 238, 744, 958, 1213, 1377
BoxI GACNNNNGTC 1 cut(s) 1192
BpmI CTGGAG 1 cut(s) 327
BpuMI CCSGG 3 cut(s) 770, 1438, 1439
Bsa29I ATCGAT 1 cut(s) 44
BsaI GGTCTC 3 cut(s) 257, 420, 732
BsaJI CCNNGG 3 cut(s) 558, 749, 1437
BsaWI WCCGGW 2 cut(s) 853, 1002
Bsc4I CCNNNNNNNGG 3 cut(s) 937, 994, 1088
Bse118I RCCGGY 1 cut(s) 1002
Bse1I ACTGG 1 cut(s) 1115
BseBI CCWGG 2 cut(s) 932, 1305
BseCI ATCGAT 1 cut(s) 44
BseDI CCNNGG 3 cut(s) 558, 749, 1437
BseGI GGATG 5 cut(s) 229, 514, 759, 1204, 1384
BseLI CCNNNNNNNGG 3 cut(s) 937, 994, 1088
BseMII CTCAG 3 cut(s) 429, 720, 783
BseNI ACTGG 1 cut(s) 1115
BseRI GAGGAG 2 cut(s) 211, 902
BseXI GCAGC 2 cut(s) 538, 1332
BsgI GTGCAG 2 cut(s) 1104, 1331
BshFI GGCC 1 cut(s) 1107
BshTI ACCGGT 1 cut(s) 1002
BshVI ATCGAT 1 cut(s) 44
BsiHKAI GWGCWC 1 cut(s) 315
BsiHKCI CYCGRG 2 cut(s) 557, 1437
BsiSI CCGG 4 cut(s) 770, 854, 1003, 1438
BslFI GGGAC 1 cut(s) 1145
BslI CCNNNNNNNGG 3 cut(s) 937, 994, 1088
BsmAI GTCTC 6 cut(s) 257, 420, 732, 850, 1040, 1200
BsmFI GGGAC 1 cut(s) 1145
BsnI GGCC 1 cut(s) 1107
Bso31I GGTCTC 3 cut(s) 257, 420, 732
BsoBI CYCGRG 2 cut(s) 557, 1437
Bsp1286I GDGCHC 2 cut(s) 315, 1183
BspACI CCGC 6 cut(s) 505, 612, 639, 1088, 1481, 1509
BspANI GGCC 1 cut(s) 1107
BspCNI CTCAG 3 cut(s) 430, 721, 784
BspDI ATCGAT 1 cut(s) 44
BspHI TCATGA 1 cut(s) 1218
BspLI GGNNCC 4 cut(s) 815, 1007, 1063, 1302
BspPI GGATC 5 cut(s) 12, 739, 790, 1137, 1506
BspQI GCTCTTC 1 cut(s) 1245
BspTNI GGTCTC 3 cut(s) 257, 420, 732
BsrFI RCCGGY 1 cut(s) 1002
BsrI ACTGG 1 cut(s) 1115
BssAI RCCGGY 1 cut(s) 1002
BssECI CCNNGG 3 cut(s) 558, 749, 1437
BssSI CACGAG 2 cut(s) 268, 1209
BssT1I CCWWGG 1 cut(s) 749
Bst2BI CACGAG 2 cut(s) 268, 1209
Bst2UI CCWGG 2 cut(s) 932, 1305
Bst4CI ACNGT 8 cut(s) 219, 809, 862, 976, 1058, 1385, 1405, 1478
Bst6I CTCTTC 6 cut(s) 180, 651, 714, 1245, 1437, 1496
BstC8I GCNNGC 2 cut(s) 870, 1090
BstDEI CTNAG 3 cut(s) 438, 729, 792
BstF5I GGATG 5 cut(s) 229, 514, 759, 1204, 1384
BstH2I RGCGCY 1 cut(s) 1095
BstHHI GCGC 4 cut(s) 1077, 1094, 1204, 1508
BstMAI GTCTC 6 cut(s) 257, 420, 732, 850, 1040, 1200
BstNI CCWGG 2 cut(s) 932, 1305
BstNSI RCATGY 2 cut(s) 119, 1127
BstPAI GACNNNNGTC 1 cut(s) 1192
BstSCI CCNGG 5 cut(s) 768, 930, 1303, 1436, 1437
BstSFI CTRYAG 1 cut(s) 1101
BstV1I GCAGC 2 cut(s) 538, 1332
BstX2I RGATCY 2 cut(s) 795, 1498
BstYI RGATCY 2 cut(s) 795, 1498
Bsu15I ATCGAT 1 cut(s) 44
BsuI GTATCC 1 cut(s) 850
BsuRI GGCC 1 cut(s) 1107
BsuTUI ATCGAT 1 cut(s) 44
BtsCI GGATG 5 cut(s) 229, 514, 759, 1204, 1384
BtsIMutI CAGTG 3 cut(s) 1063, 1108, 1401
Cac8I GCNNGC 2 cut(s) 870, 1090
CciI TCATGA 1 cut(s) 1218
CfoI GCGC 4 cut(s) 1077, 1094, 1204, 1508
Cfr10I RCCGGY 1 cut(s) 1002
Cfr13I GGNCC 2 cut(s) 587, 1478
Cfr9I CCCGGG 1 cut(s) 1437
ClaI ATCGAT 1 cut(s) 44
CpoI CGGWCCG 1 cut(s) 1478
CsiI ACCWGGT 1 cut(s) 930
Csp6I GTAC 4 cut(s) 397, 625, 642, 1450
CspAI ACCGGT 1 cut(s) 1002
CspI CGGWCCG 1 cut(s) 1478
CviAII CATG 8 cut(s) 116, 175, 913, 1124, 1199, 1219, 1285, 1390
CviQI GTAC 4 cut(s) 397, 625, 642, 1450
DdeI CTNAG 3 cut(s) 438, 729, 792
Eam1104I CTCTTC 6 cut(s) 180, 651, 714, 1245, 1437, 1496
EarI CTCTTC 6 cut(s) 180, 651, 714, 1245, 1437, 1496
Ecl136II GAGCTC 1 cut(s) 313
Eco130I CCWWGG 1 cut(s) 749
Eco24I GRGCYC 2 cut(s) 315, 1183
Eco31I GGTCTC 3 cut(s) 257, 420, 732
Eco47I GGWCC 2 cut(s) 587, 1478
Eco53kI GAGCTC 1 cut(s) 313
Eco57I CTGAAG 6 cut(s) 452, 612, 1104, 1175, 1336, 1406
Eco88I CYCGRG 2 cut(s) 557, 1437
EcoICRI GAGCTC 1 cut(s) 313
EcoRII CCWGG 2 cut(s) 930, 1303
EcoT14I CCWWGG 1 cut(s) 749
EcoT22I ATGCAT 1 cut(s) 231
EcoT38I GRGCYC 2 cut(s) 315, 1183
ErhI CCWWGG 1 cut(s) 749
FaeI CATG 8 cut(s) 119, 178, 916, 1127, 1202, 1222, 1288, 1393
FaqI GGGAC 1 cut(s) 1145
FatI CATG 8 cut(s) 115, 174, 912, 1123, 1198, 1218, 1284, 1389
FauI CCCGC 2 cut(s) 498, 1081
Fnu4HI GCNGC 3 cut(s) 552, 1346, 1509
FokI GGATG 5 cut(s) 216, 521, 766, 1191, 1391
FriOI GRGCYC 2 cut(s) 315, 1183
Fsp4HI GCNGC 3 cut(s) 552, 1346, 1509
FspAI RTGCGCAY 2 cut(s) 1076, 1203
FspBI CTAG 2 cut(s) 735, 1028
FspI TGCGCA 2 cut(s) 1076, 1203
GlaI GCGC 4 cut(s) 1076, 1093, 1203, 1507
GluI GCNGC 3 cut(s) 552, 1346, 1509
GsuI CTGGAG 1 cut(s) 327
HaeII RGCGCY 1 cut(s) 1095
HaeIII GGCC 1 cut(s) 1107
HapII CCGG 4 cut(s) 770, 854, 1003, 1438
HhaI GCGC 4 cut(s) 1077, 1094, 1204, 1508
Hin1II CATG 8 cut(s) 119, 178, 916, 1127, 1202, 1222, 1288, 1393
Hin6I GCGC 4 cut(s) 1075, 1092, 1202, 1506
HinP1I GCGC 4 cut(s) 1075, 1092, 1202, 1506
HincII GTYRAC 5 cut(s) 766, 803, 910, 1336, 1474
HindII GTYRAC 5 cut(s) 766, 803, 910, 1336, 1474
HindIII AAGCTT 1 cut(s) 62
HinfI GANTC 9 cut(s) 41, 211, 455, 780, 820, 941, 1031, 1114, 1361
HpaI GTTAAC 2 cut(s) 910, 1474
HpaII CCGG 4 cut(s) 770, 854, 1003, 1438
HphI GGTGA 5 cut(s) 112, 775, 784, 1089, 1389
Hpy166II GTNNAC 5 cut(s) 766, 803, 910, 1336, 1474
Hpy188I TCNGA 5 cut(s) 730, 1036, 1323, 1355, 1538
Hpy8I GTNNAC 5 cut(s) 766, 803, 910, 1336, 1474
Hpy99I CGWCG 1 cut(s) 162
HpyAV CCTTC 1 cut(s) 91
HpyCH4III ACNGT 8 cut(s) 219, 809, 862, 976, 1058, 1385, 1405, 1478
HpyCH4V TGCA 4 cut(s) 229, 479, 1121, 1348
HpyF3I CTNAG 3 cut(s) 438, 729, 792
Hsp92II CATG 8 cut(s) 119, 178, 916, 1127, 1202, 1222, 1288, 1393
HspAI GCGC 4 cut(s) 1075, 1092, 1202, 1506
KspAI GTTAAC 2 cut(s) 910, 1474
LguI GCTCTTC 1 cut(s) 1245
LmnI GCTCC 2 cut(s) 559, 1145
Lsp1109I GCAGC 2 cut(s) 538, 1332
LweI GCATC 5 cut(s) 238, 744, 958, 1213, 1377
MabI ACCWGGT 1 cut(s) 930
MaeI CTAG 2 cut(s) 735, 1028
MaeIII GTNAC 5 cut(s) 121, 272, 362, 976, 1274
MboII GAAGA 9 cut(s) 197, 362, 638, 701, 1232, 1276, 1279, 1454, 1483
MflI RGATCY 2 cut(s) 795, 1498
MhlI GDGCHC 2 cut(s) 315, 1183
MluCI AATT 6 cut(s) 55, 81, 442, 575, 687, 1412
MlyI GAGTC 1 cut(s) 814
MmeI TCCRAC 1 cut(s) 1241
Mph1103I ATGCAT 1 cut(s) 231
MroXI GAANNNNTTC 1 cut(s) 666
MseI TTAA 6 cut(s) 153, 207, 471, 690, 909, 1473
MslI CAYNNNNRTG 2 cut(s) 179, 1209
MspA1I CMGCKG 1 cut(s) 1345
MspI CCGG 4 cut(s) 770, 854, 1003, 1438
MspR9I CCNGG 5 cut(s) 770, 932, 1305, 1438, 1439
MvaI CCWGG 2 cut(s) 932, 1305
NciI CCSGG 3 cut(s) 770, 1438, 1439
NlaIII CATG 8 cut(s) 119, 178, 916, 1127, 1202, 1222, 1288, 1393
NlaIV GGNNCC 4 cut(s) 815, 1007, 1063, 1302
NmuCI GTSAC 3 cut(s) 121, 272, 1274
NsbI TGCGCA 2 cut(s) 1076, 1203
NsiI ATGCAT 1 cut(s) 231
NspI RCATGY 2 cut(s) 119, 1127
PagI TCATGA 1 cut(s) 1218
PciI ACATGT 1 cut(s) 1123
PciSI GCTCTTC 1 cut(s) 1245
PcsI WCGNNNNNNNCGW 2 cut(s) 50, 555
PdmI GAANNNNTTC 1 cut(s) 666
PfeI GAWTC 8 cut(s) 41, 211, 455, 780, 941, 1031, 1114, 1361
PflMI CCANNNNNTGG 1 cut(s) 937
PinAI ACCGGT 1 cut(s) 1002
PkrI GCNGC 3 cut(s) 553, 1347, 1510
PleI GAGTC 1 cut(s) 814
PpsI GAGTC 1 cut(s) 814
PscI ACATGT 1 cut(s) 1123
PshAI GACNNNNGTC 1 cut(s) 1192
Psp124BI GAGCTC 1 cut(s) 315
Psp6I CCWGG 2 cut(s) 930, 1303
PspGI CCWGG 2 cut(s) 930, 1303
PspN4I GGNNCC 4 cut(s) 815, 1007, 1063, 1302
PspPI GGNCC 2 cut(s) 587, 1478
PsuI RGATCY 2 cut(s) 795, 1498
PvuII CAGCTG 1 cut(s) 1345
RsaI GTAC 4 cut(s) 398, 626, 643, 1451
RsaNI GTAC 4 cut(s) 397, 625, 642, 1450
RseI CAYNNNNRTG 2 cut(s) 179, 1209
Rsr2I CGGWCCG 1 cut(s) 1478
RsrII CGGWCCG 1 cut(s) 1478
SacI GAGCTC 1 cut(s) 315
SapI GCTCTTC 1 cut(s) 1245
SaqAI TTAA 6 cut(s) 153, 207, 471, 690, 909, 1473
SatI GCNGC 3 cut(s) 552, 1346, 1509
Sau96I GGNCC 2 cut(s) 587, 1478
ScaI AGTACT 2 cut(s) 398, 1451
SchI GAGTC 1 cut(s) 814
ScrFI CCNGG 5 cut(s) 770, 932, 1305, 1438, 1439
SduI GDGCHC 2 cut(s) 315, 1183
SexAI ACCWGGT 1 cut(s) 930
SfaNI GCATC 5 cut(s) 238, 744, 958, 1213, 1377
SfcI CTRYAG 1 cut(s) 1101
SinI GGWCC 2 cut(s) 587, 1478
SmaI CCCGGG 1 cut(s) 1439
SmiMI CAYNNNNRTG 2 cut(s) 179, 1209
Sse9I AATT 6 cut(s) 55, 81, 442, 575, 687, 1412
SsiI CCGC 6 cut(s) 505, 612, 639, 1088, 1481, 1509
SspI AATATT 1 cut(s) 469
SspMI CTAG 2 cut(s) 735, 1028
SstI GAGCTC 1 cut(s) 315
StyD4I CCNGG 5 cut(s) 768, 930, 1303, 1436, 1437
StyI CCWWGG 1 cut(s) 749
TaaI ACNGT 8 cut(s) 219, 809, 862, 976, 1058, 1385, 1405, 1478
TaqI TCGA 4 cut(s) 44, 458, 1171, 1294
TasI AATT 6 cut(s) 55, 81, 442, 575, 687, 1412
TatI WGTACW 2 cut(s) 396, 1449
TauI GCSGC 1 cut(s) 1511
TfiI GAWTC 8 cut(s) 41, 211, 455, 780, 941, 1031, 1114, 1361
Tru1I TTAA 6 cut(s) 153, 207, 471, 690, 909, 1473
Tru9I TTAA 6 cut(s) 153, 207, 471, 690, 909, 1473
TscAI CASTG 3 cut(s) 1063, 1115, 1408
TseFI GTSAC 3 cut(s) 121, 272, 1274
TseI GCWGC 2 cut(s) 551, 1345
Tsp45I GTSAC 3 cut(s) 121, 272, 1274
TspDTI ATGAA 5 cut(s) 675, 1235, 1239, 1301, 1374
TspGWI ACGGA 2 cut(s) 788, 998
TspMI CCCGGG 1 cut(s) 1437
TspRI CASTG 3 cut(s) 1063, 1115, 1408
Van91I CCANNNNNTGG 1 cut(s) 937
VpaK11BI GGWCC 2 cut(s) 587, 1478
XapI RAATTY 2 cut(s) 442, 1412
XbaI TCTAGA 1 cut(s) 1027
XceI RCATGY 2 cut(s) 119, 1127
XmaI CCCGGG 1 cut(s) 1437
XmnI GAANNNNTTC 1 cut(s) 666
XspI CTAG 2 cut(s) 735, 1028
ZrmI AGTACT 2 cut(s) 398, 1451
Zsp2I ATGCAT 1 cut(s) 231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.