AT3G03630

Belongs to the cysteine synthase cystathionine beta- synthase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
877844 .. 880461
2618 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G03630.1

Sequence Viewer

Length: 1215 bp
ATGGCTTTCGCGTCTCCTTCGCTCCGTCTTCTTCCTCAGTCTCCGTTAGGTCGAATAACATCTAAACTACACCGTTTCAGTACTGCGAAACTCTCACTCTTCTCCTTTCACCATGATTCTTCATCTTCTTTGGCTGTCAGAACTCCGGTATCTTCCTTCGTCGTCGGCGCTATCTCCGGAAAATCCTCTACCGGAACGAAATCGAAATCCAAAACCAAACGGAAACCACCTCCTCCTCCGCCAGTCACTACTGTGGCTGAAGAGCAACACATTGCTGAGTCAGAGACAGTCAACATTGCCGAAGATGTCACTCAATTGATTGGAAGCACACCAATGGTCTATCTCAATAGAGTCACAGATGGTTGTTTGGCTGACATTGCTGCCAAGCTCGAATCAATGGAGCCCTGTAGAAGCGTCAAAGATAGGATCGGTCTGAGCATGATCAACGAGGCAGAAAACAGCGGAGCTATAACTCCGAGGAAGACTGTATTAGTAGAACCAACAACCGGAAACACTGGCCTTGGGATTGCATTTGTGGCTGCAGCTAAAGGCTACAAGCTTATAGTGACAATGCCAGCTTCTATCAATATTGAAAGGAGGATGCTTTTACGTGCACTAGGAGCAGAGATTGTGCTAACGAATCCAGAGAAGGGTCTCAAAGGAGCAGTGGATAAAGCCAAAGAGATTGTTCTCAAGACAAAGAACGCATATATGTTTCAGCAATTCGACAATACAGCAAATACAAAGATCCACTTTGAAACTACAGGACCAGAAATCTGGGAAGATACAATGGGTAATGTCGATATATTCGTTGCCGGAATAGGAACTGGTGGTACTGTAACTGGTACTGGAGGTTTCTTGAAAATGATGAACAAGGATATTAAGGTAGTTGGCGTTGAACCATCAGAAAGAAGTGTGATTTCTGGAGACAACCCTGGTTACTTACCGGGAATCTTGGATGTTAAATTACTTGATGAAGTGTTTAAGGTTAGCAACGGGGAAGCGATTGAGATGGCGAGGAGACTAGCTTTAGAGGAAGGATTGCTGGTTGGGATTTCATCTGGAGCTGCTGCAGTAGCAGCAGTCAGCTTGGCTAAAAGAGCAGAGAATGCCGGTAAACTAATCACGGTTCTGTTTCCAAGCCATGGCGAGCGGTATATCACAACGGCTCTGTTTAGTTCCATCAACAGAGAAGTCCAAGAGATGAGATATTAG

Protein Analysis

404

Amino Acids

43.16

Weight (kDa)

9.0

Isoelectric Point (pI)

35.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PALP PF00291 103 - 378 1.6e-62 Pyridoxal-phosphate dependent enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1145
AccBSI CCGCTC 1 cut(s) 1153
AccII CGCG 1 cut(s) 11
AccIII TCCGGA 1 cut(s) 176
AciI CCGC 3 cut(s) 239, 462, 1153
AclWI GGATC 2 cut(s) 434, 742
AcuI CTGAAG 1 cut(s) 279
AfaI GTAC 3 cut(s) 82, 835, 847
AfiI CCNNNNNNNGG 3 cut(s) 506, 650, 1145
AgsI TTSAA 4 cut(s) 593, 758, 862, 899
AjnI CCWGG 1 cut(s) 934
AleI CACNNNNGTG 1 cut(s) 251
AluBI AGCT 8 cut(s) 388, 467, 545, 559, 578, 1028, 1067, 1089
AluI AGCT 8 cut(s) 388, 467, 545, 559, 578, 1028, 1067, 1089
Alw21I GWGCWC 1 cut(s) 616
Alw26I GTCTC 6 cut(s) 18, 45, 278, 659, 921, 1015
Alw44I GTGCAC 1 cut(s) 612
AlwI GGATC 2 cut(s) 434, 742
Aor13HI TCCGGA 1 cut(s) 176
AoxI GGCC 1 cut(s) 517
ApaLI GTGCAC 1 cut(s) 612
ApeKI GCWGC 6 cut(s) 380, 539, 542, 1067, 1070, 1079
AspLEI GCGC 1 cut(s) 170
AspS9I GGNCC 1 cut(s) 767
AsuC2I CCSGG 1 cut(s) 948
AsuHPI GGTGA 1 cut(s) 101
AvaII GGWCC 1 cut(s) 767
BaeGI GKGCMC 1 cut(s) 616
BaeI ACNNNNGTAYC 2 cut(s) 132, 165
BanII GRGCYC 1 cut(s) 405
BbsI GAAGAC 2 cut(s) 20, 488
Bbv12I GWGCWC 1 cut(s) 616
BbvI GCAGC 6 cut(s) 367, 526, 554, 1054, 1057, 1091
BccI CCATC 4 cut(s) 353, 910, 1006, 1190
BceAI ACGGC 1 cut(s) 1182
BciT130I CCWGG 1 cut(s) 936
BclI TGATCA 1 cut(s) 441
BcnI CCSGG 1 cut(s) 948
BcoDI GTCTC 6 cut(s) 18, 45, 278, 659, 921, 1015
BfaI CTAG 2 cut(s) 617, 1025
BfmI CTRYAG 4 cut(s) 406, 540, 762, 1071
BfoI RGCGCY 1 cut(s) 171
BisI GCNGC 6 cut(s) 381, 540, 543, 1068, 1071, 1080
BlsI GCNGC 6 cut(s) 382, 541, 544, 1069, 1072, 1081
BmcAI AGTACT 1 cut(s) 82
Bme1390I CCNGG 2 cut(s) 936, 948
Bme18I GGWCC 1 cut(s) 767
BmgT120I GGNCC 1 cut(s) 767
BmiI GGNNCC 1 cut(s) 402
BmrFI CCNGG 2 cut(s) 936, 948
BmsI GCATC 1 cut(s) 591
BpiI GAAGAC 2 cut(s) 20, 488
BpmI CTGGAG 3 cut(s) 870, 945, 1083
BpuEI CTTGAG 1 cut(s) 677
BpuMI CCSGG 1 cut(s) 948
BsaAI YACGTR 1 cut(s) 611
BsaI GGTCTC 1 cut(s) 659
BsaJI CCNNGG 4 cut(s) 476, 520, 934, 1144
BsaWI WCCGGW 4 cut(s) 145, 176, 191, 506
Bsc4I CCNNNNNNNGG 3 cut(s) 506, 650, 1145
Bse118I RCCGGY 1 cut(s) 1112
Bse1I ACTGG 5 cut(s) 242, 520, 832, 847, 853
Bse3DI GCAATG 3 cut(s) 270, 294, 375
BseAI TCCGGA 1 cut(s) 176
BseBI CCWGG 1 cut(s) 936
BseDI CCNNGG 4 cut(s) 476, 520, 934, 1144
BseGI GGATG 2 cut(s) 606, 964
BseLI CCNNNNNNNGG 3 cut(s) 506, 650, 1145
BseMI GCAATG 3 cut(s) 270, 294, 375
BseMII CTCAG 3 cut(s) 50, 267, 425
BseNI ACTGG 5 cut(s) 242, 520, 832, 847, 853
BseRI GAGGAG 3 cut(s) 222, 225, 1033
BseSI GKGCMC 1 cut(s) 616
BseXI GCAGC 6 cut(s) 367, 526, 554, 1054, 1057, 1091
Bsh1236I CGCG 1 cut(s) 11
BshFI GGCC 1 cut(s) 519
BsiHKAI GWGCWC 1 cut(s) 616
BsiSI CCGG 7 cut(s) 146, 177, 192, 507, 816, 947, 1113
BslI CCNNNNNNNGG 3 cut(s) 506, 650, 1145
BsmAI GTCTC 6 cut(s) 18, 45, 278, 659, 921, 1015
BsmBI CGTCTC 1 cut(s) 18
BsmI GAATGC 1 cut(s) 1114
BsnI GGCC 1 cut(s) 519
Bso31I GGTCTC 1 cut(s) 659
Bsp1286I GDGCHC 2 cut(s) 405, 616
Bsp13I TCCGGA 1 cut(s) 176
Bsp143I GATC 3 cut(s) 426, 441, 747
Bsp19I CCATGG 1 cut(s) 1144
BspACI CCGC 3 cut(s) 239, 462, 1153
BspANI GGCC 1 cut(s) 519
BspCNI CTCAG 3 cut(s) 49, 268, 426
BspEI TCCGGA 1 cut(s) 176
BspFNI CGCG 1 cut(s) 11
BspLI GGNNCC 1 cut(s) 402
BspMAI CTGCAG 2 cut(s) 544, 1075
BspPI GGATC 2 cut(s) 434, 742
BspQI GCTCTTC 1 cut(s) 255
BspTNI GGTCTC 1 cut(s) 659
BsrBI CCGCTC 1 cut(s) 1153
BsrDI GCAATG 3 cut(s) 270, 294, 375
BsrFI RCCGGY 1 cut(s) 1112
BsrI ACTGG 5 cut(s) 242, 520, 832, 847, 853
BssAI RCCGGY 1 cut(s) 1112
BssECI CCNNGG 4 cut(s) 476, 520, 934, 1144
BssMI GATC 3 cut(s) 426, 441, 747
BssT1I CCWWGG 2 cut(s) 520, 1144
Bst2UI CCWGG 1 cut(s) 936
Bst4CI ACNGT 6 cut(s) 74, 253, 289, 487, 838, 1129
Bst6I CTCTTC 2 cut(s) 104, 255
BstAPI GCANNNNNTGC 1 cut(s) 1109
BstBAI YACGTR 1 cut(s) 611
BstC8I GCNNGC 2 cut(s) 576, 1151
BstDEI CTNAG 3 cut(s) 36, 276, 434
BstDSI CCRYGG 1 cut(s) 1144
BstF5I GGATG 2 cut(s) 606, 964
BstFNI CGCG 1 cut(s) 11
BstH2I RGCGCY 1 cut(s) 171
BstHHI GCGC 1 cut(s) 170
BstKTI GATC 3 cut(s) 429, 444, 750
BstMAI GTCTC 6 cut(s) 18, 45, 278, 659, 921, 1015
BstMBI GATC 3 cut(s) 426, 441, 747
BstMWI GCNNNNNNNGC 7 cut(s) 377, 536, 620, 1076, 1079, 1100, 1109
BstNI CCWGG 1 cut(s) 936
BstSCI CCNGG 2 cut(s) 934, 946
BstSFI CTRYAG 4 cut(s) 406, 540, 762, 1071
BstSLI GKGCMC 1 cut(s) 616
BstUI CGCG 1 cut(s) 11
BstV1I GCAGC 6 cut(s) 367, 526, 554, 1054, 1057, 1091
BstV2I GAAGAC 2 cut(s) 20, 488
BstX2I RGATCY 1 cut(s) 747
BstXI CCANNNNNNTGG 1 cut(s) 777
BstYI RGATCY 1 cut(s) 747
BsuRI GGCC 1 cut(s) 519
BtgI CCRYGG 1 cut(s) 1144
BtsCI GGATG 2 cut(s) 606, 964
BtsI GCAGTG 1 cut(s) 672
BtsIMutI CAGTG 2 cut(s) 513, 672
Cac8I GCNNGC 2 cut(s) 576, 1151
CfoI GCGC 1 cut(s) 170
Cfr10I RCCGGY 1 cut(s) 1112
Cfr13I GGNCC 1 cut(s) 767
CseI GACGC 1 cut(s) 403
Csp6I GTAC 3 cut(s) 81, 834, 846
CviAII CATG 3 cut(s) 113, 439, 1145
CviQI GTAC 3 cut(s) 81, 834, 846
DdeI CTNAG 3 cut(s) 36, 276, 434
DpnI GATC 3 cut(s) 428, 443, 749
DpnII GATC 3 cut(s) 426, 441, 747
Eam1104I CTCTTC 2 cut(s) 104, 255
EarI CTCTTC 2 cut(s) 104, 255
EciI GGCGGA 1 cut(s) 228
Eco130I CCWWGG 2 cut(s) 520, 1144
Eco24I GRGCYC 1 cut(s) 405
Eco31I GGTCTC 1 cut(s) 659
Eco47I GGWCC 1 cut(s) 767
Eco57I CTGAAG 1 cut(s) 279
EcoRII CCWGG 1 cut(s) 934
EcoT14I CCWWGG 2 cut(s) 520, 1144
EcoT38I GRGCYC 1 cut(s) 405
ErhI CCWWGG 2 cut(s) 520, 1144
Esp3I CGTCTC 1 cut(s) 18
FaeI CATG 3 cut(s) 116, 442, 1148
FalI AAGNNNNNCTT 2 cut(s) 737, 769
FatI CATG 3 cut(s) 112, 438, 1144
FbaI TGATCA 1 cut(s) 441
Fnu4HI GCNGC 6 cut(s) 381, 540, 543, 1068, 1071, 1080
FokI GGATG 2 cut(s) 613, 971
FriOI GRGCYC 1 cut(s) 405
Fsp4HI GCNGC 6 cut(s) 381, 540, 543, 1068, 1071, 1080
FspBI CTAG 2 cut(s) 617, 1025
GlaI GCGC 1 cut(s) 169
GluI GCNGC 6 cut(s) 381, 540, 543, 1068, 1071, 1080
GsuI CTGGAG 3 cut(s) 870, 945, 1083
HaeII RGCGCY 1 cut(s) 171
HaeIII GGCC 1 cut(s) 519
HapII CCGG 7 cut(s) 146, 177, 192, 507, 816, 947, 1113
HgaI GACGC 1 cut(s) 403
HhaI GCGC 1 cut(s) 170
Hin1II CATG 3 cut(s) 116, 442, 1148
Hin6I GCGC 1 cut(s) 168
HinP1I GCGC 1 cut(s) 168
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HindIII AAGCTT 1 cut(s) 557
HinfI GANTC 6 cut(s) 116, 278, 351, 392, 640, 951
HpaII CCGG 7 cut(s) 146, 177, 192, 507, 816, 947, 1113
HphI GGTGA 1 cut(s) 101
Hpy166II GTNNAC 3 cut(s) 292, 614, 1118
Hpy188I TCNGA 5 cut(s) 140, 283, 435, 477, 907
Hpy188III TCNNGA 6 cut(s) 177, 644, 694, 859, 924, 1062
Hpy8I GTNNAC 3 cut(s) 292, 614, 1118
Hpy99I CGWCG 2 cut(s) 164, 167
HpyAV CCTTC 4 cut(s) 27, 166, 643, 1031
HpyCH4III ACNGT 6 cut(s) 74, 253, 289, 487, 838, 1129
HpyCH4IV ACGT 1 cut(s) 610
HpyCH4V TGCA 4 cut(s) 530, 542, 614, 1073
HpyF10VI GCNNNNNNNGC 7 cut(s) 377, 536, 620, 1076, 1079, 1100, 1109
HpyF3I CTNAG 3 cut(s) 36, 276, 434
HpySE526I ACGT 1 cut(s) 610
Hsp92II CATG 3 cut(s) 116, 442, 1148
HspAI GCGC 1 cut(s) 168
Kpn2I TCCGGA 1 cut(s) 176
Ksp22I TGATCA 1 cut(s) 441
Kzo9I GATC 3 cut(s) 426, 441, 747
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 6 cut(s) 27, 400, 464, 620, 662, 1064
Lsp1109I GCAGC 6 cut(s) 367, 526, 554, 1054, 1057, 1091
LweI GCATC 1 cut(s) 591
MaeI CTAG 2 cut(s) 617, 1025
MaeII ACGT 1 cut(s) 610
MaeIII GTNAC 6 cut(s) 244, 307, 352, 565, 838, 938
MalI GATC 3 cut(s) 428, 443, 749
MbiI CCGCTC 1 cut(s) 1153
MboI GATC 3 cut(s) 426, 441, 747
MfeI CAATTG 1 cut(s) 314
MflI RGATCY 1 cut(s) 747
MhlI GDGCHC 2 cut(s) 405, 616
MluCI AATT 3 cut(s) 314, 722, 965
MlyI GAGTC 2 cut(s) 287, 360
MroI TCCGGA 1 cut(s) 176
MseI TTAA 3 cut(s) 882, 963, 984
MslI CAYNNNNRTG 2 cut(s) 251, 332
MspA1I CMGCKG 1 cut(s) 462
MspI CCGG 7 cut(s) 146, 177, 192, 507, 816, 947, 1113
MspR9I CCNGG 2 cut(s) 936, 948
MunI CAATTG 1 cut(s) 314
Mva1269I GAATGC 1 cut(s) 1114
MvaI CCWGG 1 cut(s) 936
MvnI CGCG 1 cut(s) 11
MwoI GCNNNNNNNGC 7 cut(s) 377, 536, 620, 1076, 1079, 1100, 1109
NciI CCSGG 1 cut(s) 948
NcoI CCATGG 1 cut(s) 1144
NdeII GATC 3 cut(s) 426, 441, 747
NlaIII CATG 3 cut(s) 116, 442, 1148
NlaIV GGNNCC 1 cut(s) 402
NmuCI GTSAC 4 cut(s) 244, 307, 352, 565
OliI CACNNNNGTG 1 cut(s) 251
PciSI GCTCTTC 1 cut(s) 255
PcsI WCGNNNNNNNCGW 1 cut(s) 807
PctI GAATGC 1 cut(s) 1114
PfeI GAWTC 4 cut(s) 116, 392, 640, 951
PflMI CCANNNNNTGG 1 cut(s) 1145
PkrI GCNGC 6 cut(s) 382, 541, 544, 1069, 1072, 1081
PleI GAGTC 2 cut(s) 286, 359
PpsI GAGTC 2 cut(s) 286, 359
Ppu21I YACGTR 1 cut(s) 611
Psp6I CCWGG 1 cut(s) 934
PspGI CCWGG 1 cut(s) 934
PspN4I GGNNCC 1 cut(s) 402
PspPI GGNCC 1 cut(s) 767
PsrI GAACNNNNNNTAC 2 cut(s) 817, 849
PstI CTGCAG 2 cut(s) 544, 1075
PsuI RGATCY 1 cut(s) 747
RsaI GTAC 3 cut(s) 82, 835, 847
RsaNI GTAC 3 cut(s) 81, 834, 846
RseI CAYNNNNRTG 2 cut(s) 251, 332
SapI GCTCTTC 1 cut(s) 255
SaqAI TTAA 3 cut(s) 882, 963, 984
SatI GCNGC 6 cut(s) 381, 540, 543, 1068, 1071, 1080
Sau3AI GATC 3 cut(s) 426, 441, 747
Sau96I GGNCC 1 cut(s) 767
ScaI AGTACT 1 cut(s) 82
SchI GAGTC 2 cut(s) 287, 360
ScrFI CCNGG 2 cut(s) 936, 948
SduI GDGCHC 2 cut(s) 405, 616
SfaNI GCATC 1 cut(s) 591
SfcI CTRYAG 4 cut(s) 406, 540, 762, 1071
SinI GGWCC 1 cut(s) 767
SmiMI CAYNNNNRTG 2 cut(s) 251, 332
SmlI CTYRAG 1 cut(s) 692
SmoI CTYRAG 1 cut(s) 692
Sse9I AATT 3 cut(s) 314, 722, 965
SsiI CCGC 3 cut(s) 239, 462, 1153
SspI AATATT 1 cut(s) 589
SspMI CTAG 2 cut(s) 617, 1025
StyD4I CCNGG 2 cut(s) 934, 946
StyI CCWWGG 2 cut(s) 520, 1144
TaaI ACNGT 6 cut(s) 74, 253, 289, 487, 838, 1129
TaiI ACGT 1 cut(s) 613
TaqI TCGA 5 cut(s) 52, 203, 390, 726, 801
TaqII GACCGA 1 cut(s) 419
TasI AATT 3 cut(s) 314, 722, 965
TatI WGTACW 1 cut(s) 80
TfiI GAWTC 4 cut(s) 116, 392, 640, 951
Tru1I TTAA 3 cut(s) 882, 963, 984
Tru9I TTAA 3 cut(s) 882, 963, 984
TscAI CASTG 2 cut(s) 520, 672
TseFI GTSAC 4 cut(s) 244, 307, 352, 565
TseI GCWGC 6 cut(s) 380, 539, 542, 1067, 1070, 1079
Tsp45I GTSAC 4 cut(s) 244, 307, 352, 565
TspDTI ATGAA 4 cut(s) 111, 884, 990, 1047
TspGWI ACGGA 3 cut(s) 14, 33, 235
TspRI CASTG 2 cut(s) 520, 672
Van91I CCANNNNNTGG 1 cut(s) 1145
VneI GTGCAC 1 cut(s) 612
VpaK11BI GGWCC 1 cut(s) 767
XspI CTAG 2 cut(s) 617, 1025
ZrmI AGTACT 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.