Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004023

Physical Location & Seq

Genomic Coordinates Forward (+)

956862 .. 961032

Gene Structure 4171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G03780.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGCTTCCCACATTGTTGGATATCCACGTATGGGACCTAAGAGAGAGCTCAAGTTTGCATTGGAGTCTTTCTGGGATGGCAAGAGCAGTGCCGATGATTTGCAGAAGGTGTCTGCTGATCTCAGGTCTGATATCTGGAAACAGATGTCTGCTGCTGGGATTAAGTATATCCCAAGCAACACCTTTTCTCATTATGACCAGGTGCTTGACACCACCGCCATGCTTGGTGCTGTTCCATCTAGATATGGATTTACCAGTGGTGAGATCGGTCTCGATGTTTACTTCTCCATGGCTAGAGGAAATGCCTCTGTTCCAGCTATGGAGATGACCAAGTGGTTTGACACCAACTACCATTACATCGTCCCAGAGTTGGGCCCTGAAGTGAAATTTTCTTACGCATCTCACAAGGCTGTCAATGAGTACAAGGAGGCCAAGGCTCTTGGTGTTGAGACCGTCCCTGTACTTGTTGGCCCTGTCTCTTACTTGCTTCTTTCCAAGCTTGCTAAGGGTGTTGACAAGTCATTTGATCTTCTCTCCCTTCTCCCCAAAATCCTCCCAGTTTACAAGGAAGTCATTGCAGAGCTTAAGGCAGCTGGTGCCTCCTGGATTCAGCTTGATGAGCCTCTCTTTGTCATGGATCTCGAGGGTCACAAACTCCAGGCTTTTAGCGGTGCCTATGCTGAGCTTGAATCAACTCTCTCTGGTCTGAATGTTCTTGTGGAGACCTACTTCGCTGATATCCCTGCTGAAGCATACAAGACCCTTACTTCCTTGAAGGGTGTGACTGCCTTCGGATTTGATTTGGTTCGTGGCACCAAGACCATTGACTTGATCAAGTCAGGTTTCCCACAGGGCAAGTACCTCTTTGCTGGTGTTGTTGACGGAAGGAACATCTGGGCCAATGACCTCGCTGCCTCTCTCATCACCTTGCAGTCACTTGAGGGTGTTGTTGGTAAAGACAAGCTTGTGGTCTCAACCTCTTGCTCTCTTCTCCACACTGCCGTTGACCTTATTAACGAGACTAAGCTTGATGCTGAAATCAAGTCGTGGCTAGCTTTTGCTGCCCAGAAGGTTGTTGAAGTTGACGCATTGGCCAAGGCTTTGGCCGGTCAGACAAATGAGAGTTTCTTCACTGCCAACGCTGACGCATTGTCTTCGAGGAGGTCTTCCCCAAGAGTCACCAATGAGTCTGTCCAGAAGGCTGCTGCTGCTTTGAAGGGATCTGACCACCGCCGTACAACTGAAGTTAGCGCAAGGCTAGATGCTCAGCAGAAGAAGCTTAACCTTCCAATCCTCCCAACCACAACCATTGGATCCTTCCCACAGACCGTGGAACTCAGGAGAGTTCGCCGTGAATACAAGGCCAAGAAAATCTCTGAAGAGGATTACGTCAAGGCCATCAAGGAAGAGATCAAGAAAGTTGTTGACATCCAAGAGGACCTTGACATTGATGTTCTTGTTCACGGAGAGCCTGAGAGAAACGACATGGTTGAGTACTTTGGAGAGCAATTGTCAGGTTTCGCATTCACAGCAAACGGATGGGTGCAATCCTATGGATCTCGCTGTGTGAAGCCACCAGTTATCTATGGTGACGTGAGCCGCCCCAAGCCAATGACAGTCTTCTGGTCCTCAACAGCTCAGAGCATGACCAAACGTCCAATGAAGGGTATGCTTACAGGTCCAGTCACAATTCTCAACTGGTCTTTTGTCAGAAACGACCAGCCCAGGCACGAAACCTGTTACCAGATCGCTTTGGCCATCAAAGATGAAGTGGAAGACCTCGAGAAAGGCGGTATTGGAGTCATTCAGATCGATGAAGCCGCACTTAGAGAAGGATTGCCTCTTAGGAAAGCCGAACACTCTTTCTACTTGGACTGGGCTGTTCACTCTTTCAGAATCACCAACTGTGGCGTCCAAGACAGCACTCAGATTCACACTCACATGTGTTACTCAAACTTCAACGACATCATCCACTCAATCATTGACATGGACGCTGATGTCATCACCATTGAGAACTCTCGTTCAGACGAGAAGCTTCTCTCAGTGTTCCGTGAAGGAGTGAAGTACGGTGCAGGAATCGGTCCTGGTGTTTACGACATTCACTCTCCGAGAATACCATCCACAGATGAAATTGCAGACAGGATCAACAAGATGCTTGCGGTTCTTGAGCAGAACATCTTGTGGGTTAACCCTGACTGTGGTCTGAAGACAAGGAAGTACACTGAGGTTAAACCAGCACTTAAAGCCATGGTTGACGCGGCTAAGCTTATCCGCTCCCAGCTCGGTAGTGCCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0003871 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006520 GO:0006555 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008168 GO:0008172 GO:0008270 GO:0008652 GO:0008705 GO:0009058 GO:0009066 GO:0009067 GO:0009086 GO:0009506 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0016020 GO:0016053 GO:0016740 GO:0016741 GO:0019752 GO:0030054 GO:0031090 GO:0031967 GO:0031975 GO:0032259 GO:0042084 GO:0042085 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050667 GO:0050896 GO:0055044 GO:0071704 GO:0071944 GO:0098588 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00450 ko01100 ko01110 ko01230 map00270 map00450 map01100 map01110 map01230

Pfam Domains

Protein Families

Meth_synt_1 Meth_synt_2

Protein Analysis

765

Amino Acids

84.58

Weight (kDa)

6.09

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Meth_synt_1	PF08267	3 - 316	9.6e-120	Cobalamin-independent synthase, N-terminal domain
Meth_synt_2	PF01717	432 - 755	1.6e-161	Cobalamin-independent synthase, Catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03780 AT3G03780 AT3G03780 AT5G17920 AT5G17920
fragaria_vesca	FvH4_1g28390 FvH4_1g28390 FvH4_1g28390 FvH4_1g28390 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260
malus_domestica	MD12G1008100.v1.1 MD14G1005500.v1.1
prunus_persica	Prupe.7G009200_v2.0.a1 Prupe.7G009200_v2.0.a1 Prupe.7G009200_v2.0.a1
pyrus_communis	pycom12g00610 pycom14g00410
rosa_chinensis	RchiOBHm_Chr3g0496511
rosa_laevigata	RLG00000022522
rosa_multiflora	Rmu_sc0000620.1_g000008
rosa_roxburghii	Rroxscaffold_6G00389060
rosa_rugosa	Rorug03G0283400 Rorug03G0283500
rosa_samantha	Rh3AG329600 Rh3BG365100 Rh3CG362500 Rh3DG365600
rosa_wichuraiana	Rw3G028830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1997
AccB1I	GGYRCC	3 cut(s)	596, 671, 812
AccBSI	CCGCTC	1 cut(s)	2274
AccII	CGCG	1 cut(s)	2258
AciI	CCGC	9 cut(s)	216, 669, 1231, 1600, 1791, 1821, 2159, 2258, 2272
AclWI	GGATC	6 cut(s)	645, 1228, 1308, 1321, 1564, 2150
AcoI	YGGCCR	3 cut(s)	1092, 1104, 1755
AcsI	RAATTY	1 cut(s)	386
AcuI	CTGAAG	5 cut(s)	399, 768, 1263, 1398, 2225
AcyI	GRCGYC	1 cut(s)	1911
AfaI	GTAC	7 cut(s)	422, 462, 860, 1237, 1496, 2066, 2219
AfiI	CCNNNNNNNGG	5 cut(s)	32, 370, 371, 1664, 2198
AflII	CTTAAG	1 cut(s)	584
AflIII	ACRYGT	1 cut(s)	1941
AgsI	TTSAA	5 cut(s)	689, 775, 1079, 1216, 1960
AhdI	GACNNNNNGTC	2 cut(s)	1150, 1653
AjiI	CACGTC	1 cut(s)	1594
AjnI	CCWGG	5 cut(s)	198, 602, 657, 1724, 2083
Alw21I	GWGCWC	1 cut(s)	51
Alw26I	GTCTC	6 cut(s)	275, 443, 481, 716, 976, 1013
AlwI	GGATC	6 cut(s)	645, 1228, 1308, 1321, 1564, 2150
Ama87I	CYCGRG	2 cut(s)	641, 1781
AoxI	GGCC	9 cut(s)	373, 429, 469, 897, 1092, 1104, 1362, 1395, 1755
ApaI	GGGCCC	1 cut(s)	377
ApeKI	GCWGC	7 cut(s)	152, 590, 911, 1061, 1202, 1205, 1208
ApoI	RAATTY	1 cut(s)	386
ArsI	GACNNNNNNTTYG	2 cut(s)	506, 538
AspLEI	GCGC	1 cut(s)	1253
AspS9I	GGNCC	9 cut(s)	35, 373, 374, 470, 897, 1438, 1626, 1679, 2081
AsuHPI	GGTGA	6 cut(s)	272, 916, 1171, 1601, 1891, 1996
AsuNHI	GCTAGC	1 cut(s)	1051
AvaI	CYCGRG	2 cut(s)	641, 1781
AvaII	GGWCC	5 cut(s)	35, 1438, 1626, 1679, 2081
BaeGI	GKGCMC	1 cut(s)	377
BalI	TGGCCA	2 cut(s)	1094, 1757
BamHI	GGATCC	1 cut(s)	1313
BanI	GGYRCC	3 cut(s)	596, 671, 812
BanII	GRGCYC	2 cut(s)	51, 377
BbsI	GAAGAC	5 cut(s)	1146, 1158, 1612, 1782, 2213
Bbv12I	GWGCWC	1 cut(s)	51
BbvI	GCAGC	7 cut(s)	139, 602, 898, 1048, 1189, 1192, 1195
BccI	CCATC	6 cut(s)	71, 244, 1406, 1533, 1766, 2125
BceAI	ACGGC	3 cut(s)	986, 1218, 1335
BcgI	CGANNNNNNTGC	2 cut(s)	1137, 1171
BciT130I	CCWGG	5 cut(s)	200, 604, 659, 1726, 2085
BclI	TGATCA	1 cut(s)	831
BcoDI	GTCTC	6 cut(s)	275, 443, 481, 716, 976, 1013
BfaI	CTAG	4 cut(s)	240, 294, 1052, 1259
BfrI	CTTAAG	1 cut(s)	584
BlpI	GCTNAGC	3 cut(s)	681, 1266, 2262
BmcAI	AGTACT	1 cut(s)	1496
Bme1390I	CCNGG	5 cut(s)	200, 604, 659, 1726, 2085
Bme18I	GGWCC	5 cut(s)	35, 1438, 1626, 1679, 2081
BmeRI	GACNNNNNGTC	2 cut(s)	1150, 1653
BmeT110I	CYCGRG	2 cut(s)	641, 1781
BmgBI	CACGTC	1 cut(s)	1594
BmgT120I	GGNCC	9 cut(s)	35, 373, 374, 470, 897, 1438, 1626, 1679, 2081
BmiI	GGNNCC	6 cut(s)	36, 375, 598, 673, 814, 1315
BmrFI	CCNGG	5 cut(s)	200, 604, 659, 1726, 2085
BmrI	ACTGGG	2 cut(s)	551, 1885
BmsI	GCATC	4 cut(s)	407, 1021, 1252, 2142
BmtI	GCTAGC	1 cut(s)	1055
BmuI	ACTGGG	2 cut(s)	551, 1885
BoxI	GACNNNNGTC	1 cut(s)	2199
BpiI	GAAGAC	5 cut(s)	1146, 1158, 1612, 1782, 2213
BpmI	CTGGAG	1 cut(s)	641
Bpu10I	CCTNAGC	1 cut(s)	504
Bpu1102I	GCTNAGC	3 cut(s)	681, 1266, 2262
BpuEI	CTTGAG	3 cut(s)	35, 959, 2186
Bsa29I	ATCGAT	1 cut(s)	1812
BsaAI	YACGTR	1 cut(s)	29
BsaHI	GRCGYC	1 cut(s)	1911
BsaI	GGTCTC	4 cut(s)	275, 443, 716, 976
BsaJI	CCNNGG	6 cut(s)	288, 432, 1095, 1329, 1724, 2247
Bsc4I	CCNNNNNNNGG	5 cut(s)	32, 370, 371, 1664, 2198
Bse118I	RCCGGY	1 cut(s)	1106
Bse1I	ACTGG	6 cut(s)	255, 557, 1577, 1682, 1703, 1880
Bse3DI	GCAATG	1 cut(s)	573
BseBI	CCWGG	5 cut(s)	200, 604, 659, 1726, 2085
BseCI	ATCGAT	1 cut(s)	1812
BseDI	CCNNGG	6 cut(s)	288, 432, 1095, 1329, 1724, 2247
BseGI	GGATG	5 cut(s)	82, 1428, 1544, 1968, 2117
BseLI	CCNNNNNNNGG	5 cut(s)	32, 370, 371, 1664, 2198
BseMI	GCAATG	1 cut(s)	573
BseMII	CTCAG	9 cut(s)	136, 672, 1280, 1351, 1464, 1652, 1940, 2055, 2214
BseNI	ACTGG	6 cut(s)	255, 557, 1577, 1682, 1703, 1880
BseRI	GAGGAG	1 cut(s)	1174
BseSI	GKGCMC	1 cut(s)	377
BseXI	GCAGC	7 cut(s)	139, 602, 898, 1048, 1189, 1192, 1195
BseYI	CCCAGC	2 cut(s)	155, 2277
BsgI	GTGCAG	1 cut(s)	2091
Bsh1236I	CGCG	1 cut(s)	2258
BshFI	GGCC	9 cut(s)	375, 431, 471, 899, 1094, 1106, 1364, 1397, 1757
BshNI	GGYRCC	3 cut(s)	596, 671, 812
BshVI	ATCGAT	1 cut(s)	1812
BsiHKAI	GWGCWC	1 cut(s)	51
BsiHKCI	CYCGRG	2 cut(s)	641, 1781
BsiSI	CCGG	1 cut(s)	1107
BslFI	GGGAC	3 cut(s)	48, 347, 440
BslI	CCNNNNNNNGG	5 cut(s)	32, 370, 371, 1664, 2198
BsmAI	GTCTC	6 cut(s)	275, 443, 481, 716, 976, 1013
BsmFI	GGGAC	3 cut(s)	48, 347, 440
BsmI	GAATGC	1 cut(s)	1523
BsnI	GGCC	9 cut(s)	375, 431, 471, 899, 1094, 1106, 1364, 1397, 1757
Bso31I	GGTCTC	4 cut(s)	275, 443, 716, 976
BsoBI	CYCGRG	2 cut(s)	641, 1781
Bsp120I	GGGCCC	1 cut(s)	373
Bsp1286I	GDGCHC	2 cut(s)	51, 377
Bsp1720I	GCTNAGC	3 cut(s)	681, 1266, 2262
Bsp19I	CCATGG	2 cut(s)	288, 2247
BspACI	CCGC	9 cut(s)	216, 669, 1231, 1600, 1791, 1821, 2159, 2258, 2272
BspANI	GGCC	9 cut(s)	375, 431, 471, 899, 1094, 1106, 1364, 1397, 1757
BspCNI	CTCAG	9 cut(s)	135, 673, 1279, 1350, 1465, 1651, 1939, 2054, 2215
BspDI	ATCGAT	1 cut(s)	1812
BspFNI	CGCG	1 cut(s)	2258
BspLI	GGNNCC	6 cut(s)	36, 375, 598, 673, 814, 1315
BspOI	GCTAGC	1 cut(s)	1055
BspPI	GGATC	6 cut(s)	645, 1228, 1308, 1321, 1564, 2150
BspT107I	GGYRCC	3 cut(s)	596, 671, 812
BspTI	CTTAAG	1 cut(s)	584
BspTNI	GGTCTC	4 cut(s)	275, 443, 716, 976
BsrBI	CCGCTC	1 cut(s)	2274
BsrDI	GCAATG	1 cut(s)	573
BsrFI	RCCGGY	1 cut(s)	1106
BsrI	ACTGG	6 cut(s)	255, 557, 1577, 1682, 1703, 1880
BssAI	RCCGGY	1 cut(s)	1106
BssECI	CCNNGG	6 cut(s)	288, 432, 1095, 1329, 1724, 2247
BssNI	GRCGYC	1 cut(s)	1911
BssT1I	CCWWGG	4 cut(s)	288, 432, 1095, 2247
Bst2UI	CCWGG	5 cut(s)	200, 604, 659, 1726, 2085
Bst4CI	ACNGT	6 cut(s)	454, 1330, 1618, 1907, 2069, 2198
Bst6I	CTCTTC	3 cut(s)	993, 1374, 1401
BstACI	GRCGYC	1 cut(s)	1911
BstAFI	CTTAAG	1 cut(s)	584
BstAPI	GCANNNNNTGC	1 cut(s)	596
BstBAI	YACGTR	1 cut(s)	29
BstC8I	GCNNGC	3 cut(s)	501, 1053, 2157
BstDSI	CCRYGG	3 cut(s)	288, 1329, 2247
BstF5I	GGATG	5 cut(s)	82, 1428, 1544, 1968, 2117
BstFNI	CGCG	1 cut(s)	2258
BstHHI	GCGC	1 cut(s)	1253
BstMAI	GTCTC	6 cut(s)	275, 443, 481, 716, 976, 1013
BstMWI	GCNNNNNNNGC	7 cut(s)	596, 619, 1061, 1208, 1276, 1529, 2243
BstNI	CCWGG	5 cut(s)	200, 604, 659, 1726, 2085
BstNSI	RCATGY	1 cut(s)	1945
BstPAI	GACNNNNGTC	1 cut(s)	2199
BstSCI	CCNGG	5 cut(s)	198, 602, 657, 1724, 2083
BstSLI	GKGCMC	1 cut(s)	377
BstUI	CGCG	1 cut(s)	2258
BstV1I	GCAGC	7 cut(s)	139, 602, 898, 1048, 1189, 1192, 1195
BstV2I	GAAGAC	5 cut(s)	1146, 1158, 1612, 1782, 2213
BstX2I	RGATCY	4 cut(s)	637, 1220, 1313, 1556
BstXI	CCANNNNNNTGG	2 cut(s)	17, 1102
BstYI	RGATCY	4 cut(s)	637, 1220, 1313, 1556
Bsu15I	ATCGAT	1 cut(s)	1812
BsuRI	GGCC	9 cut(s)	375, 431, 471, 899, 1094, 1106, 1364, 1397, 1757
BsuTUI	ATCGAT	1 cut(s)	1812
BtgI	CCRYGG	3 cut(s)	288, 1329, 2247
BtrI	CACGTC	1 cut(s)	1594
BtsCI	GGATG	5 cut(s)	82, 1428, 1544, 1968, 2117
BtsI	GCAGTG	3 cut(s)	94, 996, 1131
BtsIMutI	CAGTG	6 cut(s)	94, 262, 996, 1131, 2049, 2220
Cac8I	GCNNGC	3 cut(s)	501, 1053, 2157
CfoI	GCGC	1 cut(s)	1253
Cfr10I	RCCGGY	1 cut(s)	1106
Cfr13I	GGNCC	9 cut(s)	35, 373, 374, 470, 897, 1438, 1626, 1679, 2081
ClaI	ATCGAT	1 cut(s)	1812
CseI	GACGC	5 cut(s)	1094, 1154, 1900, 2000, 2264
CsiI	ACCWGGT	1 cut(s)	198
Csp6I	GTAC	7 cut(s)	421, 461, 859, 1236, 1495, 2065, 2218
CspCI	CAANNNNNGTGG	2 cut(s)	1291, 1326
CviAII	CATG	8 cut(s)	220, 289, 634, 1486, 1645, 1942, 1987, 2248
CviQI	GTAC	7 cut(s)	421, 461, 859, 1236, 1495, 2065, 2218
DrdI	GACNNNNNNGTC	1 cut(s)	1997
DriI	GACNNNNNGTC	2 cut(s)	1150, 1653
DseDI	GACNNNNNNGTC	1 cut(s)	1997
EaeI	YGGCCR	3 cut(s)	1092, 1104, 1755
Eam1104I	CTCTTC	3 cut(s)	993, 1374, 1401
Eam1105I	GACNNNNNGTC	2 cut(s)	1150, 1653
EarI	CTCTTC	3 cut(s)	993, 1374, 1401
Ecl136II	GAGCTC	1 cut(s)	49
Eco130I	CCWWGG	4 cut(s)	288, 432, 1095, 2247
Eco24I	GRGCYC	2 cut(s)	51, 377
Eco31I	GGTCTC	4 cut(s)	275, 443, 716, 976
Eco32I	GATATC	3 cut(s)	23, 133, 739
Eco47I	GGWCC	5 cut(s)	35, 1438, 1626, 1679, 2081
Eco53kI	GAGCTC	1 cut(s)	49
Eco57I	CTGAAG	5 cut(s)	399, 768, 1263, 1398, 2225
Eco88I	CYCGRG	2 cut(s)	641, 1781
EcoICRI	GAGCTC	1 cut(s)	49
EcoO109I	RGGNCCY	3 cut(s)	35, 374, 1438
EcoRII	CCWGG	5 cut(s)	198, 602, 657, 1724, 2083
EcoRV	GATATC	3 cut(s)	23, 133, 739
EcoT14I	CCWWGG	4 cut(s)	288, 432, 1095, 2247
EcoT38I	GRGCYC	2 cut(s)	51, 377
ErhI	CCWWGG	4 cut(s)	288, 432, 1095, 2247
FaeI	CATG	8 cut(s)	223, 292, 637, 1489, 1648, 1945, 1990, 2251
FalI	AAGNNNNNCTT	8 cut(s)	848, 880, 948, 980, 1425, 1457, 1809, 1841
FaqI	GGGAC	3 cut(s)	48, 347, 440
FatI	CATG	8 cut(s)	219, 288, 633, 1485, 1644, 1941, 1986, 2247
FbaI	TGATCA	1 cut(s)	831
FokI	GGATG	5 cut(s)	89, 1415, 1551, 1955, 2104
FriOI	GRGCYC	2 cut(s)	51, 377
FspBI	CTAG	4 cut(s)	240, 294, 1052, 1259
GlaI	GCGC	1 cut(s)	1252
GsaI	CCCAGC	2 cut(s)	159, 2281
GsuI	CTGGAG	1 cut(s)	641
HaeIII	GGCC	9 cut(s)	375, 431, 471, 899, 1094, 1106, 1364, 1397, 1757
HapII	CCGG	1 cut(s)	1107
HgaI	GACGC	5 cut(s)	1094, 1154, 1900, 2000, 2264
HhaI	GCGC	1 cut(s)	1253
Hin1I	GRCGYC	1 cut(s)	1911
Hin1II	CATG	8 cut(s)	223, 292, 637, 1489, 1648, 1945, 1990, 2251
Hin6I	GCGC	1 cut(s)	1251
HinP1I	GCGC	1 cut(s)	1251
HincII	GTYRAC	7 cut(s)	514, 880, 1006, 1084, 1426, 2188, 2254
HindII	GTYRAC	7 cut(s)	514, 880, 1006, 1084, 1426, 2188, 2254
HindIII	AAGCTT	6 cut(s)	497, 962, 1025, 1277, 2033, 2264
HinfI	GANTC	9 cut(s)	65, 607, 689, 1176, 1187, 1800, 1896, 1930, 2076
HpaI	GTTAAC	1 cut(s)	2188
HpaII	CCGG	1 cut(s)	1107
HphI	GGTGA	6 cut(s)	272, 916, 1171, 1601, 1891, 1996
Hpy188III	TCNNGA	9 cut(s)	136, 240, 272, 641, 1195, 1339, 1414, 1783, 2165
HpyCH4III	ACNGT	6 cut(s)	454, 1330, 1618, 1907, 2069, 2198
HpyCH4IV	ACGT	4 cut(s)	28, 1389, 1593, 1654
HpyCH4V	TGCA	7 cut(s)	59, 103, 578, 931, 1546, 2072, 2135
HpyF10VI	GCNNNNNNNGC	7 cut(s)	596, 619, 1061, 1208, 1276, 1529, 2243
HpySE526I	ACGT	4 cut(s)	28, 1389, 1593, 1654
Hsp92I	GRCGYC	1 cut(s)	1911
Hsp92II	CATG	8 cut(s)	223, 292, 637, 1489, 1648, 1945, 1990, 2251
HspAI	GCGC	1 cut(s)	1251
Ksp22I	TGATCA	1 cut(s)	831
KspAI	GTTAAC	1 cut(s)	2188
LmnI	GCTCC	1 cut(s)	2279
Lsp1109I	GCAGC	7 cut(s)	139, 602, 898, 1048, 1189, 1192, 1195
LweI	GCATC	4 cut(s)	407, 1021, 1252, 2142
MabI	ACCWGGT	1 cut(s)	198
MaeI	CTAG	4 cut(s)	240, 294, 1052, 1259
MaeII	ACGT	4 cut(s)	28, 1389, 1593, 1654
MaeIII	GTNAC	8 cut(s)	647, 781, 933, 1177, 1589, 1684, 1739, 1946
MbiI	CCGCTC	1 cut(s)	2274
MfeI	CAATTG	1 cut(s)	1508
MflI	RGATCY	4 cut(s)	637, 1220, 1313, 1556
MhlI	GDGCHC	2 cut(s)	51, 377
MlsI	TGGCCA	2 cut(s)	1094, 1757
MluCI	AATT	4 cut(s)	386, 1508, 1689, 2130
MluNI	TGGCCA	2 cut(s)	1094, 1757
MlyI	GAGTC	4 cut(s)	74, 1185, 1196, 1809
Mox20I	TGGCCA	2 cut(s)	1094, 1757
MscI	TGGCCA	2 cut(s)	1094, 1757
MseI	TTAA	7 cut(s)	162, 585, 1014, 1281, 2187, 2229, 2241
MslI	CAYNNNNRTG	3 cut(s)	218, 1940, 1985
Msp20I	TGGCCA	2 cut(s)	1094, 1757
MspA1I	CMGCKG	1 cut(s)	593
MspCI	CTTAAG	1 cut(s)	584
MspI	CCGG	1 cut(s)	1107
MspR9I	CCNGG	5 cut(s)	200, 604, 659, 1726, 2085
MunI	CAATTG	1 cut(s)	1508
Mva1269I	GAATGC	1 cut(s)	1523
MvaI	CCWGG	5 cut(s)	200, 604, 659, 1726, 2085
MvnI	CGCG	1 cut(s)	2258
MwoI	GCNNNNNNNGC	7 cut(s)	596, 619, 1061, 1208, 1276, 1529, 2243
NcoI	CCATGG	2 cut(s)	288, 2247
NheI	GCTAGC	1 cut(s)	1051
NlaIII	CATG	8 cut(s)	223, 292, 637, 1489, 1648, 1945, 1990, 2251
NlaIV	GGNNCC	6 cut(s)	36, 375, 598, 673, 814, 1315
NmuCI	GTSAC	6 cut(s)	647, 781, 933, 1177, 1589, 1684
NspI	RCATGY	1 cut(s)	1945
PaeR7I	CTCGAG	2 cut(s)	641, 1781
PciI	ACATGT	1 cut(s)	1941
PctI	GAATGC	1 cut(s)	1523
PfeI	GAWTC	5 cut(s)	607, 689, 1896, 1930, 2076
PfoI	TCCNGGA	1 cut(s)	602
PleI	GAGTC	4 cut(s)	73, 1184, 1195, 1808
PpsI	GAGTC	4 cut(s)	73, 1184, 1195, 1808
Ppu21I	YACGTR	1 cut(s)	29
PpuMI	RGGWCCY	2 cut(s)	35, 1438
PscI	ACATGT	1 cut(s)	1941
PshAI	GACNNNNGTC	1 cut(s)	2199
Psp124BI	GAGCTC	1 cut(s)	51
Psp5II	RGGWCCY	2 cut(s)	35, 1438
Psp6I	CCWGG	5 cut(s)	198, 602, 657, 1724, 2083
PspFI	CCCAGC	2 cut(s)	155, 2277
PspGI	CCWGG	5 cut(s)	198, 602, 657, 1724, 2083
PspN4I	GGNNCC	6 cut(s)	36, 375, 598, 673, 814, 1315
PspOMI	GGGCCC	1 cut(s)	373
PspPI	GGNCC	9 cut(s)	35, 373, 374, 470, 897, 1438, 1626, 1679, 2081
PspPPI	RGGWCCY	2 cut(s)	35, 1438
PsuI	RGATCY	4 cut(s)	637, 1220, 1313, 1556
PvuII	CAGCTG	1 cut(s)	593
RsaI	GTAC	7 cut(s)	422, 462, 860, 1237, 1496, 2066, 2219
RsaNI	GTAC	7 cut(s)	421, 461, 859, 1236, 1495, 2065, 2218
RseI	CAYNNNNRTG	3 cut(s)	218, 1940, 1985
SacI	GAGCTC	1 cut(s)	51
SaqAI	TTAA	7 cut(s)	162, 585, 1014, 1281, 2187, 2229, 2241
Sau96I	GGNCC	9 cut(s)	35, 373, 374, 470, 897, 1438, 1626, 1679, 2081
ScaI	AGTACT	1 cut(s)	1496
SchI	GAGTC	4 cut(s)	74, 1185, 1196, 1809
ScrFI	CCNGG	5 cut(s)	200, 604, 659, 1726, 2085
SduI	GDGCHC	2 cut(s)	51, 377
SexAI	ACCWGGT	1 cut(s)	198
SfaNI	GCATC	4 cut(s)	407, 1021, 1252, 2142
Sfr274I	CTCGAG	2 cut(s)	641, 1781
SinI	GGWCC	5 cut(s)	35, 1438, 1626, 1679, 2081
SlaI	CTCGAG	2 cut(s)	641, 1781
SmiMI	CAYNNNNRTG	3 cut(s)	218, 1940, 1985
SmlI	CTYRAG	6 cut(s)	50, 584, 641, 938, 1781, 2165
SmoI	CTYRAG	6 cut(s)	50, 584, 641, 938, 1781, 2165
Sse9I	AATT	4 cut(s)	386, 1508, 1689, 2130
SsiI	CCGC	9 cut(s)	216, 669, 1231, 1600, 1791, 1821, 2159, 2258, 2272
SspMI	CTAG	4 cut(s)	240, 294, 1052, 1259
SstI	GAGCTC	1 cut(s)	51
StyD4I	CCNGG	5 cut(s)	198, 602, 657, 1724, 2083
StyI	CCWWGG	4 cut(s)	288, 432, 1095, 2247
TaaI	ACNGT	6 cut(s)	454, 1330, 1618, 1907, 2069, 2198
TaiI	ACGT	4 cut(s)	31, 1392, 1596, 1657
TaqI	TCGA	5 cut(s)	273, 642, 1157, 1782, 1812
TaqII	GACCGA	2 cut(s)	257, 2069
TasI	AATT	4 cut(s)	386, 1508, 1689, 2130
TatI	WGTACW	4 cut(s)	420, 460, 1494, 2217
TauI	GCSGC	3 cut(s)	1602, 1823, 2261
TfiI	GAWTC	5 cut(s)	607, 689, 1896, 1930, 2076
Tru1I	TTAA	7 cut(s)	162, 585, 1014, 1281, 2187, 2229, 2241
Tru9I	TTAA	7 cut(s)	162, 585, 1014, 1281, 2187, 2229, 2241
TscAI	CASTG	6 cut(s)	94, 262, 1003, 1138, 2049, 2227
TseFI	GTSAC	6 cut(s)	647, 781, 933, 1177, 1589, 1684
TseI	GCWGC	7 cut(s)	152, 590, 911, 1061, 1202, 1205, 1208
Tsp45I	GTSAC	6 cut(s)	647, 781, 933, 1177, 1589, 1684
TspDTI	ATGAA	4 cut(s)	1676, 1782, 1830, 2142
TspGWI	ACGGA	4 cut(s)	897, 1479, 1551, 2039
TspRI	CASTG	6 cut(s)	94, 262, 1003, 1138, 2049, 2227
Vha464I	CTTAAG	1 cut(s)	584
VpaK11BI	GGWCC	5 cut(s)	35, 1438, 1626, 1679, 2081
XapI	RAATTY	1 cut(s)	386
XbaI	TCTAGA	1 cut(s)	239
XceI	RCATGY	1 cut(s)	1945
XhoI	CTCGAG	2 cut(s)	641, 1781
XspI	CTAG	4 cut(s)	240, 294, 1052, 1259
ZrmI	AGTACT	1 cut(s)	1496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.