5-methyltetrahydropteroyltriglutamate-- homocysteine
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03780 AT3G03780 AT3G03780 AT5G17920 AT5G17920 |
| fragaria_vesca | FvH4_1g28390 FvH4_1g28390 FvH4_1g28390 FvH4_1g28390 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 |
| malus_domestica | MD12G1008100.v1.1 MD14G1005500.v1.1 |
| prunus_persica | Prupe.7G009200_v2.0.a1 Prupe.7G009200_v2.0.a1 Prupe.7G009200_v2.0.a1 |
| pyrus_communis | pycom12g00610 pycom14g00410 |
| rosa_chinensis | RchiOBHm_Chr3g0496511 |
| rosa_laevigata | RLG00000022522 |
| rosa_multiflora | Rmu_sc0000620.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00389060 |
| rosa_rugosa | Rorug03G0283400 Rorug03G0283500 |
| rosa_samantha | Rh3AG329600 Rh3BG365100 Rh3CG362500 Rh3DG365600 |
| rosa_wichuraiana | Rw3G028830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1451 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 245 |
| AccI | GTMKAC | 1 cut(s) | 2091 |
| AccII | CGCG | 1 cut(s) | 2052 |
| AclI | AACGTT | 2 cut(s) | 1419, 1800 |
| AclWI | GGATC | 7 cut(s) | 167, 645, 1321, 1564, 1785, 1904, 2150 |
| AcoI | YGGCCR | 3 cut(s) | 291, 1092, 1755 |
| AcsI | RAATTY | 2 cut(s) | 842, 2014 |
| AcuI | CTGAAG | 3 cut(s) | 1415, 1876, 2244 |
| AcvI | CACGTG | 1 cut(s) | 202 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 4 cut(s) | 814, 925, 1496, 2219 |
| AflII | CTTAAG | 1 cut(s) | 584 |
| AflIII | ACRYGT | 1 cut(s) | 1941 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 380 |
| AjnI | CCWGG | 4 cut(s) | 684, 1032, 2083, 2247 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 338, 370, 877, 909, 933, 965 |
| AleI | CACNNNNGTG | 2 cut(s) | 1233, 2225 |
| Alw21I | GWGCWC | 3 cut(s) | 51, 1443, 2166 |
| Alw26I | GTCTC | 7 cut(s) | 12, 716, 976, 1013, 1727, 2162, 2207 |
| AlwI | GGATC | 7 cut(s) | 167, 645, 1321, 1564, 1785, 1904, 2150 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 314, 1682 |
| Ama87I | CYCGRG | 2 cut(s) | 224, 2165 |
| ApaI | GGGCCC | 1 cut(s) | 38 |
| ApoI | RAATTY | 2 cut(s) | 842, 2014 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 811, 843 |
| AspLEI | GCGC | 1 cut(s) | 439 |
| AspS9I | GGNCC | 9 cut(s) | 34, 35, 374, 470, 1030, 1345, 1679, 1701, 2081 |
| AsuHPI | GGTGA | 9 cut(s) | 272, 674, 775, 851, 1189, 1601, 1678, 1891, 1996 |
| AsuII | TTCGAA | 1 cut(s) | 494 |
| AvaI | CYCGRG | 2 cut(s) | 224, 2165 |
| AvaII | GGWCC | 5 cut(s) | 374, 470, 1030, 1345, 1701 |
| AxyI | CCTNAGG | 1 cut(s) | 1844 |
| BaeGI | GKGCMC | 1 cut(s) | 38 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 13, 46 |
| BalI | TGGCCA | 3 cut(s) | 293, 1094, 1757 |
| BanII | GRGCYC | 4 cut(s) | 38, 51, 624, 1443 |
| BbrPI | CACGTG | 1 cut(s) | 202 |
| BbsI | GAAGAC | 2 cut(s) | 89, 2038 |
| Bbv12I | GWGCWC | 3 cut(s) | 51, 1443, 2166 |
| BbvCI | CCTCAGC | 1 cut(s) | 747 |
| BccI | CCATC | 7 cut(s) | 71, 139, 140, 243, 875, 1766, 2125 |
| BceAI | ACGGC | 2 cut(s) | 395, 1218 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2263, 2297 |
| BciT130I | CCWGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| BciVI | GTATCC | 1 cut(s) | 14 |
| BclI | TGATCA | 1 cut(s) | 2001 |
| BcoDI | GTCTC | 7 cut(s) | 12, 716, 976, 1013, 1727, 2162, 2207 |
| BfaI | CTAG | 1 cut(s) | 1254 |
| BfoI | RGCGCY | 1 cut(s) | 440 |
| BfrI | CTTAAG | 1 cut(s) | 584 |
| BfuI | GTATCC | 1 cut(s) | 14 |
| BglII | AGATCT | 1 cut(s) | 125 |
| BmcAI | AGTACT | 2 cut(s) | 925, 1496 |
| Bme1390I | CCNGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| Bme18I | GGWCC | 5 cut(s) | 374, 470, 1030, 1345, 1701 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 380 |
| BmeT110I | CYCGRG | 2 cut(s) | 224, 2165 |
| BmgT120I | GGNCC | 9 cut(s) | 34, 35, 374, 470, 1030, 1345, 1679, 1701, 2081 |
| BmiI | GGNNCC | 5 cut(s) | 36, 37, 375, 1346, 1470 |
| BmrFI | CCNGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| BmsI | GCATC | 5 cut(s) | 142, 661, 1252, 1981, 2142 |
| BpiI | GAAGAC | 2 cut(s) | 89, 2038 |
| BpmI | CTGGAG | 1 cut(s) | 615 |
| Bpu10I | CCTNAGC | 3 cut(s) | 432, 747, 1149 |
| Bpu14I | TTCGAA | 1 cut(s) | 494 |
| BpuEI | CTTGAG | 3 cut(s) | 35, 1802, 2189 |
| BsaAI | YACGTR | 1 cut(s) | 202 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 3 cut(s) | 716, 1013, 2207 |
| BsaJI | CCNNGG | 6 cut(s) | 288, 1095, 1101, 1172, 1462, 2083 |
| BsaWI | WCCGGW | 1 cut(s) | 2139 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1333, 1363 |
| Bse1I | ACTGG | 4 cut(s) | 87, 458, 1703, 2286 |
| Bse21I | CCTNAGG | 1 cut(s) | 1844 |
| Bse3DI | GCAATG | 1 cut(s) | 218 |
| BseBI | CCWGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| BseDI | CCNNGG | 6 cut(s) | 288, 1095, 1101, 1172, 1462, 2083 |
| BseGI | GGATG | 8 cut(s) | 82, 168, 254, 1123, 1771, 1968, 1996, 2097 |
| BseMI | GCAATG | 1 cut(s) | 218 |
| BseNI | ACTGG | 4 cut(s) | 87, 458, 1703, 2286 |
| BseRI | GAGGAG | 4 cut(s) | 1394, 1397, 2141, 2258 |
| BseSI | GKGCMC | 1 cut(s) | 38 |
| BseYI | CCCAGC | 4 cut(s) | 155, 173, 1539, 2277 |
| BsgI | GTGCAG | 1 cut(s) | 1934 |
| Bsh1236I | CGCG | 1 cut(s) | 2052 |
| BsiHKAI | GWGCWC | 3 cut(s) | 51, 1443, 2166 |
| BsiHKCI | CYCGRG | 2 cut(s) | 224, 2165 |
| BsiSI | CCGG | 2 cut(s) | 870, 2140 |
| BslFI | GGGAC | 2 cut(s) | 347, 387 |
| BsmAI | GTCTC | 7 cut(s) | 12, 716, 976, 1013, 1727, 2162, 2207 |
| BsmBI | CGTCTC | 1 cut(s) | 12 |
| BsmFI | GGGAC | 2 cut(s) | 347, 387 |
| BsmI | GAATGC | 3 cut(s) | 662, 752, 1674 |
| Bso31I | GGTCTC | 3 cut(s) | 716, 1013, 2207 |
| BsoBI | CYCGRG | 2 cut(s) | 224, 2165 |
| Bsp119I | TTCGAA | 1 cut(s) | 494 |
| Bsp120I | GGGCCC | 1 cut(s) | 34 |
| Bsp1286I | GDGCHC | 5 cut(s) | 38, 51, 624, 1443, 2166 |
| Bsp19I | CCATGG | 2 cut(s) | 288, 1462 |
| BspFNI | CGCG | 1 cut(s) | 2052 |
| BspLI | GGNNCC | 5 cut(s) | 36, 37, 375, 1346, 1470 |
| BspPI | GGATC | 7 cut(s) | 167, 645, 1321, 1564, 1785, 1904, 2150 |
| BspQI | GCTCTTC | 1 cut(s) | 1431 |
| BspT104I | TTCGAA | 1 cut(s) | 494 |
| BspTI | CTTAAG | 1 cut(s) | 584 |
| BspTNI | GGTCTC | 3 cut(s) | 716, 1013, 2207 |
| BsrDI | GCAATG | 1 cut(s) | 218 |
| BsrI | ACTGG | 4 cut(s) | 87, 458, 1703, 2286 |
| BssECI | CCNNGG | 6 cut(s) | 288, 1095, 1101, 1172, 1462, 2083 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 5 cut(s) | 288, 1095, 1101, 1172, 1462 |
| Bst2UI | CCWGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| Bst4CI | ACNGT | 3 cut(s) | 1531, 1589, 1618 |
| Bst6I | CTCTTC | 4 cut(s) | 534, 543, 993, 1431 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 584 |
| BstBAI | YACGTR | 1 cut(s) | 202 |
| BstBI | TTCGAA | 1 cut(s) | 494 |
| BstC8I | GCNNGC | 8 cut(s) | 660, 1053, 1654, 1860, 2074, 2157, 2235, 2283 |
| BstDSI | CCRYGG | 2 cut(s) | 288, 1462 |
| BstEII | GGTNACC | 1 cut(s) | 1177 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| BstF5I | GGATG | 8 cut(s) | 82, 168, 254, 1123, 1771, 1968, 1996, 2097 |
| BstFNI | CGCG | 1 cut(s) | 2052 |
| BstH2I | RGCGCY | 1 cut(s) | 440 |
| BstHHI | GCGC | 1 cut(s) | 439 |
| BstMAI | GTCTC | 7 cut(s) | 12, 716, 976, 1013, 1727, 2162, 2207 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 596, 951, 1061, 1142, 1151, 1208, 2161 |
| BstNI | CCWGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| BstNSI | RCATGY | 1 cut(s) | 1945 |
| BstPI | GGTNACC | 1 cut(s) | 1177 |
| BstSCI | CCNGG | 4 cut(s) | 684, 1032, 2083, 2247 |
| BstSLI | GKGCMC | 1 cut(s) | 38 |
| BstUI | CGCG | 1 cut(s) | 2052 |
| BstV2I | GAAGAC | 2 cut(s) | 89, 2038 |
| BstX2I | RGATCY | 4 cut(s) | 125, 637, 1556, 1777 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1102 |
| BstYI | RGATCY | 4 cut(s) | 125, 637, 1556, 1777 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1844 |
| BsuI | GTATCC | 1 cut(s) | 14 |
| BtgI | CCRYGG | 2 cut(s) | 288, 1462 |
| BtsCI | GGATG | 8 cut(s) | 82, 168, 254, 1123, 1771, 1968, 1996, 2097 |
| BtsI | GCAGTG | 2 cut(s) | 213, 2166 |
| BtsIMutI | CAGTG | 6 cut(s) | 94, 213, 666, 2166, 2220, 2293 |
| Cac8I | GCNNGC | 8 cut(s) | 660, 1053, 1654, 1860, 2074, 2157, 2235, 2283 |
| CaiI | CAGNNNCTG | 2 cut(s) | 314, 1682 |
| CfoI | GCGC | 1 cut(s) | 439 |
| Cfr13I | GGNCC | 9 cut(s) | 34, 35, 374, 470, 1030, 1345, 1679, 1701, 2081 |
| CsiI | ACCWGGT | 1 cut(s) | 2247 |
| Csp6I | GTAC | 4 cut(s) | 813, 924, 1495, 2218 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1291, 1326 |
| CviAII | CATG | 7 cut(s) | 289, 603, 1047, 1463, 1645, 1942, 1987 |
| CviQI | GTAC | 4 cut(s) | 813, 924, 1495, 2218 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1451 |
| DriI | GACNNNNNGTC | 1 cut(s) | 380 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1451 |
| EaeI | YGGCCR | 3 cut(s) | 291, 1092, 1755 |
| Eam1104I | CTCTTC | 4 cut(s) | 534, 543, 993, 1431 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 380 |
| EarI | CTCTTC | 4 cut(s) | 534, 543, 993, 1431 |
| Ecl136II | GAGCTC | 2 cut(s) | 49, 1441 |
| Eco130I | CCWWGG | 5 cut(s) | 288, 1095, 1101, 1172, 1462 |
| Eco147I | AGGCCT | 1 cut(s) | 1100 |
| Eco24I | GRGCYC | 4 cut(s) | 38, 51, 624, 1443 |
| Eco31I | GGTCTC | 3 cut(s) | 716, 1013, 2207 |
| Eco47I | GGWCC | 5 cut(s) | 374, 470, 1030, 1345, 1701 |
| Eco53kI | GAGCTC | 2 cut(s) | 49, 1441 |
| Eco57I | CTGAAG | 3 cut(s) | 1415, 1876, 2244 |
| Eco72I | CACGTG | 1 cut(s) | 202 |
| Eco81I | CCTNAGG | 1 cut(s) | 1844 |
| Eco88I | CYCGRG | 2 cut(s) | 224, 2165 |
| Eco91I | GGTNACC | 1 cut(s) | 1177 |
| EcoICRI | GAGCTC | 2 cut(s) | 49, 1441 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| EcoO109I | RGGNCCY | 3 cut(s) | 35, 374, 1679 |
| EcoO65I | GGTNACC | 1 cut(s) | 1177 |
| EcoRI | GAATTC | 2 cut(s) | 842, 2014 |
| EcoRII | CCWGG | 4 cut(s) | 684, 1032, 2083, 2247 |
| EcoT14I | CCWWGG | 5 cut(s) | 288, 1095, 1101, 1172, 1462 |
| EcoT38I | GRGCYC | 4 cut(s) | 38, 51, 624, 1443 |
| ErhI | CCWWGG | 5 cut(s) | 288, 1095, 1101, 1172, 1462 |
| Esp3I | CGTCTC | 1 cut(s) | 12 |
| FaeI | CATG | 7 cut(s) | 292, 606, 1050, 1466, 1648, 1945, 1990 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 948, 980 |
| FaqI | GGGAC | 2 cut(s) | 347, 387 |
| FatI | CATG | 7 cut(s) | 288, 602, 1046, 1462, 1644, 1941, 1986 |
| FauI | CCCGC | 1 cut(s) | 1661 |
| FauNDI | CATATG | 1 cut(s) | 790 |
| FbaI | TGATCA | 1 cut(s) | 2001 |
| FblI | GTMKAC | 1 cut(s) | 2091 |
| FokI | GGATG | 8 cut(s) | 89, 155, 261, 1130, 1778, 1955, 2003, 2084 |
| FriOI | GRGCYC | 4 cut(s) | 38, 51, 624, 1443 |
| FspBI | CTAG | 1 cut(s) | 1254 |
| GlaI | GCGC | 1 cut(s) | 438 |
| GsaI | CCCAGC | 4 cut(s) | 159, 177, 1543, 2281 |
| GsuI | CTGGAG | 1 cut(s) | 615 |
| HaeII | RGCGCY | 1 cut(s) | 440 |
| HapII | CCGG | 2 cut(s) | 870, 2140 |
| HhaI | GCGC | 1 cut(s) | 439 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 7 cut(s) | 292, 606, 1050, 1466, 1648, 1945, 1990 |
| Hin6I | GCGC | 1 cut(s) | 437 |
| HinP1I | GCGC | 1 cut(s) | 437 |
| HincII | GTYRAC | 2 cut(s) | 385, 2188 |
| HindII | GTYRAC | 2 cut(s) | 385, 2188 |
| HindIII | AAGCTT | 3 cut(s) | 1277, 1427, 1860 |
| HinfI | GANTC | 7 cut(s) | 65, 607, 644, 689, 934, 1930, 2209 |
| HpaI | GTTAAC | 1 cut(s) | 2188 |
| HpaII | CCGG | 2 cut(s) | 870, 2140 |
| HphI | GGTGA | 9 cut(s) | 272, 674, 775, 851, 1189, 1601, 1678, 1891, 1996 |
| Hpy166II | GTNNAC | 6 cut(s) | 385, 448, 1885, 2092, 2188, 2220 |
| Hpy188I | TCNGA | 9 cut(s) | 123, 580, 1225, 1326, 1378, 1641, 1855, 1929, 2026 |
| Hpy8I | GTNNAC | 6 cut(s) | 385, 448, 1885, 2092, 2188, 2220 |
| Hpy99I | CGWCG | 2 cut(s) | 416, 1353 |
| HpyAV | CCTTC | 7 cut(s) | 100, 879, 935, 1210, 1295, 1657, 1900 |
| HpyCH4III | ACNGT | 3 cut(s) | 1531, 1589, 1618 |
| HpyCH4IV | ACGT | 3 cut(s) | 201, 1419, 1800 |
| HpyCH4V | TGCA | 6 cut(s) | 218, 658, 1546, 1915, 2135, 2159 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 596, 951, 1061, 1142, 1151, 1208, 2161 |
| HpySE526I | ACGT | 3 cut(s) | 201, 1419, 1800 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 7 cut(s) | 292, 606, 1050, 1466, 1648, 1945, 1990 |
| HspAI | GCGC | 1 cut(s) | 437 |
| Ksp22I | TGATCA | 1 cut(s) | 2001 |
| KspAI | GTTAAC | 1 cut(s) | 2188 |
| LguI | GCTCTTC | 1 cut(s) | 1431 |
| LmnI | GCTCC | 4 cut(s) | 596, 1468, 2040, 2271 |
| LweI | GCATC | 5 cut(s) | 142, 661, 1252, 1981, 2142 |
| MabI | ACCWGGT | 1 cut(s) | 2247 |
| MaeI | CTAG | 1 cut(s) | 1254 |
| MaeII | ACGT | 3 cut(s) | 201, 1419, 1800 |
| MaeIII | GTNAC | 5 cut(s) | 781, 1109, 1177, 1684, 2243 |
| MflI | RGATCY | 4 cut(s) | 125, 637, 1556, 1777 |
| MhlI | GDGCHC | 5 cut(s) | 38, 51, 624, 1443, 2166 |
| MlsI | TGGCCA | 3 cut(s) | 293, 1094, 1757 |
| MluCI | AATT | 7 cut(s) | 842, 1071, 1290, 1410, 1508, 1809, 2014 |
| MluNI | TGGCCA | 3 cut(s) | 293, 1094, 1757 |
| MlyI | GAGTC | 2 cut(s) | 928, 2203 |
| MmeI | TCCRAC | 1 cut(s) | 1977 |
| Mox20I | TGGCCA | 3 cut(s) | 293, 1094, 1757 |
| MscI | TGGCCA | 3 cut(s) | 293, 1094, 1757 |
| MseI | TTAA | 8 cut(s) | 585, 834, 1014, 1083, 1281, 1401, 1695, 2187 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1116, 1233, 1940, 1985, 2225 |
| Msp20I | TGGCCA | 3 cut(s) | 293, 1094, 1757 |
| MspA1I | CMGCKG | 2 cut(s) | 116, 1001 |
| MspCI | CTTAAG | 1 cut(s) | 584 |
| MspI | CCGG | 2 cut(s) | 870, 2140 |
| MspR9I | CCNGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| Mva1269I | GAATGC | 3 cut(s) | 662, 752, 1674 |
| MvaI | CCWGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| MvnI | CGCG | 1 cut(s) | 2052 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 596, 951, 1061, 1142, 1151, 1208, 2161 |
| NcoI | CCATGG | 2 cut(s) | 288, 1462 |
| NdeI | CATATG | 1 cut(s) | 790 |
| NlaIII | CATG | 7 cut(s) | 292, 606, 1050, 1466, 1648, 1945, 1990 |
| NlaIV | GGNNCC | 5 cut(s) | 36, 37, 375, 1346, 1470 |
| NmuCI | GTSAC | 4 cut(s) | 781, 1109, 1177, 1684 |
| NspI | RCATGY | 1 cut(s) | 1945 |
| NspV | TTCGAA | 1 cut(s) | 494 |
| OliI | CACNNNNGTG | 2 cut(s) | 1233, 2225 |
| PaeR7I | CTCGAG | 1 cut(s) | 2165 |
| PceI | AGGCCT | 1 cut(s) | 1100 |
| PciI | ACATGT | 1 cut(s) | 1941 |
| PciSI | GCTCTTC | 1 cut(s) | 1431 |
| PctI | GAATGC | 3 cut(s) | 662, 752, 1674 |
| PfeI | GAWTC | 5 cut(s) | 65, 607, 644, 689, 1930 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 245 |
| PleI | GAGTC | 2 cut(s) | 928, 2203 |
| PmaCI | CACGTG | 1 cut(s) | 202 |
| PmlI | CACGTG | 1 cut(s) | 202 |
| PpsI | GAGTC | 2 cut(s) | 928, 2203 |
| Ppu21I | YACGTR | 1 cut(s) | 202 |
| PpuMI | RGGWCCY | 1 cut(s) | 374 |
| PscI | ACATGT | 1 cut(s) | 1941 |
| Psp124BI | GAGCTC | 2 cut(s) | 51, 1443 |
| Psp1406I | AACGTT | 2 cut(s) | 1419, 1800 |
| Psp5II | RGGWCCY | 1 cut(s) | 374 |
| Psp6I | CCWGG | 4 cut(s) | 684, 1032, 2083, 2247 |
| PspCI | CACGTG | 1 cut(s) | 202 |
| PspEI | GGTNACC | 1 cut(s) | 1177 |
| PspFI | CCCAGC | 4 cut(s) | 155, 173, 1539, 2277 |
| PspGI | CCWGG | 4 cut(s) | 684, 1032, 2083, 2247 |
| PspN4I | GGNNCC | 5 cut(s) | 36, 37, 375, 1346, 1470 |
| PspOMI | GGGCCC | 1 cut(s) | 34 |
| PspPI | GGNCC | 9 cut(s) | 34, 35, 374, 470, 1030, 1345, 1679, 1701, 2081 |
| PspPPI | RGGWCCY | 1 cut(s) | 374 |
| PstNI | CAGNNNCTG | 2 cut(s) | 314, 1682 |
| PsuI | RGATCY | 4 cut(s) | 125, 637, 1556, 1777 |
| PvuII | CAGCTG | 1 cut(s) | 116 |
| RsaI | GTAC | 4 cut(s) | 814, 925, 1496, 2219 |
| RsaNI | GTAC | 4 cut(s) | 813, 924, 1495, 2218 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1116, 1233, 1940, 1985, 2225 |
| SacI | GAGCTC | 2 cut(s) | 51, 1443 |
| SapI | GCTCTTC | 1 cut(s) | 1431 |
| SaqAI | TTAA | 8 cut(s) | 585, 834, 1014, 1083, 1281, 1401, 1695, 2187 |
| Sau96I | GGNCC | 9 cut(s) | 34, 35, 374, 470, 1030, 1345, 1679, 1701, 2081 |
| ScaI | AGTACT | 2 cut(s) | 925, 1496 |
| SchI | GAGTC | 2 cut(s) | 928, 2203 |
| ScrFI | CCNGG | 4 cut(s) | 686, 1034, 2085, 2249 |
| SduI | GDGCHC | 5 cut(s) | 38, 51, 624, 1443, 2166 |
| SexAI | ACCWGGT | 1 cut(s) | 2247 |
| SfaNI | GCATC | 5 cut(s) | 142, 661, 1252, 1981, 2142 |
| Sfr274I | CTCGAG | 1 cut(s) | 2165 |
| SfuI | TTCGAA | 1 cut(s) | 494 |
| SinI | GGWCC | 5 cut(s) | 374, 470, 1030, 1345, 1701 |
| SlaI | CTCGAG | 1 cut(s) | 2165 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1116, 1233, 1940, 1985, 2225 |
| SmlI | CTYRAG | 5 cut(s) | 50, 584, 1781, 2165, 2204 |
| SmoI | CTYRAG | 5 cut(s) | 50, 584, 1781, 2165, 2204 |
| Sse9I | AATT | 7 cut(s) | 842, 1071, 1290, 1410, 1508, 1809, 2014 |
| SseBI | AGGCCT | 1 cut(s) | 1100 |
| SspMI | CTAG | 1 cut(s) | 1254 |
| SstI | GAGCTC | 2 cut(s) | 51, 1443 |
| StuI | AGGCCT | 1 cut(s) | 1100 |
| StyD4I | CCNGG | 4 cut(s) | 684, 1032, 2083, 2247 |
| StyI | CCWWGG | 5 cut(s) | 288, 1095, 1101, 1172, 1462 |
| TaaI | ACNGT | 3 cut(s) | 1531, 1589, 1618 |
| TaiI | ACGT | 3 cut(s) | 204, 1422, 1803 |
| TaqI | TCGA | 6 cut(s) | 339, 414, 494, 1443, 1561, 2166 |
| TasI | AATT | 7 cut(s) | 842, 1071, 1290, 1410, 1508, 1809, 2014 |
| TatI | WGTACW | 3 cut(s) | 923, 1494, 2217 |
| TauI | GCSGC | 2 cut(s) | 1145, 1602 |
| TfiI | GAWTC | 5 cut(s) | 65, 607, 644, 689, 1930 |
| Tru1I | TTAA | 8 cut(s) | 585, 834, 1014, 1083, 1281, 1401, 1695, 2187 |
| Tru9I | TTAA | 8 cut(s) | 585, 834, 1014, 1083, 1281, 1401, 1695, 2187 |
| TscAI | CASTG | 6 cut(s) | 94, 220, 673, 2166, 2227, 2293 |
| TseFI | GTSAC | 4 cut(s) | 781, 1109, 1177, 1684 |
| Tsp45I | GTSAC | 4 cut(s) | 781, 1109, 1177, 1684 |
| TspDTI | ATGAA | 4 cut(s) | 346, 591, 1676, 1782 |
| TspGWI | ACGGA | 1 cut(s) | 1337 |
| TspRI | CASTG | 6 cut(s) | 94, 220, 673, 2166, 2227, 2293 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 245 |
| Vha464I | CTTAAG | 1 cut(s) | 584 |
| VpaK11BI | GGWCC | 5 cut(s) | 374, 470, 1030, 1345, 1701 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| XapI | RAATTY | 2 cut(s) | 842, 2014 |
| XceI | RCATGY | 1 cut(s) | 1945 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 246, 631 |
| XhoI | CTCGAG | 1 cut(s) | 2165 |
| XmiI | GTMKAC | 1 cut(s) | 2091 |
| XspI | CTAG | 1 cut(s) | 1254 |
| ZrmI | AGTACT | 2 cut(s) | 925, 1496 |