Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000620.1

Orthogroup ID

OG0004023

Physical Location & Seq

Genomic Coordinates Reverse (-)

43501 .. 50671

Gene Structure 7171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000620.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

atggaacccccaggtctagagttcgaatctcagctccatcccgtggccagcagatttgagggacctggtcaagtcctccccctctctacctccgaaagagaaatggcgtctcacattgttggataccctcgtatgggccccaagagagagctcaagtttgccttggaatctttctgggatggcaagagcagtgccgaagatttgcaaaaggtgtctgctgatctcaggtcttccatctggaagcagatggctgatgccgggatcatgcacattcctagcaacactttctcttactacgaccagttgcttgacaccactgcaatgcttggggcagttccaccaagatatggttggaatggtggtgagattggatttggcacgtatttctccatggccagaggaaatgcctcagttcccgctatggaaatgaccaagtggttcgataccaactaccatttcattgtccctgagttgggtcctgatgtcaaattctcatatgcttctcacaaggctgttgaggaatacaaggaggctaaagcgcttggagtggatacaatcccagtccttgttggtccagtgacctacttgttgctgtccaaaccagcaaagggtgttgaaaagacattttcgcttctctctcttctaggaaaaatcattcctatttacaaggaagttatatctgagcttaaggcagctggagcttcatggattcagtttgatgagcccacacttgttatggatcttgattctcacaagttgcaagcattcactgatgcttactctcagctagagtcaactctgtctggcttgaatgttcttattgagacctactttgcagatgtacctgcacaggcatacaagactctcacttccttgaagggtgtcactgcctatggttttgatttagttcgtggttctaagacccttgagttaattaagagcgacttccctaaaggaaagtgcctctttgctggattggttgatggaaggaacatttgggctaatgatctctctgcttccctaagtacattgcaggctcttgaaggcattgttggcaaagaccaccttgtcgtctcaacctcctgctcttgtcttcacactgctgttgatcttgttaatgagactaagctggacaatgaaatcaaatcgtggctcgcctttgctgcacagaaaattcttgaagttaatgctttggcaaaggcattggctggtcacaaggatgagtcatttttctcaagcaacgctgcagctctggcttcaaggaaatcgtccccaagggtgaccaatgaggctgttcaaaaggctgctgctgctttgaagggttctgaccatcgtcgtgctactaatgtaagtgccagacttgatgctcagcagaagaagcttaatcttccagttctcccaaccaccaccatcggatcattccctcagaccatcgaactgagaagggttcgccgtgaatacaaggccaaaaagatctctgaggaggagtatgtcaaggccattaaggaggaaattagcaaagttgtcaagcttcaggaagagcttgacattgatgtccttgttcatggggagcctgagaggaacgacatggttgagtactttggggagcaattatcaggatttgcctttactgtcaatgggtgggtgcaatcttatggatctcgatgtgtgaagccaccaatcatctatggtgatgtgagccgcccaaagccaatgactgtgttctggtcatctgctgctcagagcatgactgcccgcccaatgaagggaatgcttacaggccctgttaccatcctcaactggtcctttgttagagttgaccagcccaggtctgagactacctaccagattgctttggccattaaggatgaagtggaggatctcgagaaagctggtatcaatgttattcaaattgatgaggctgcgttgagagaagggttgcctctcaggaagtctgagcaagctcactacttggactgggccgtgcattcattcaggatcaccaacgttggtgtcaaggacactactcagattcacactcacatgtgctattccaacttcaacgacatcatccactcaatcatcgacatggatgctgatgtgatcactattgagaattctcgttctgatgagaagctcctgtcggtcttccgcgagggagtgaagtatggtgctggtattggtcctggtgtttatgatatccactctccaagaataccatcaactgaggagattgctgatcggattaacaagatgcttgcagtccttgagacaaatatcttgtgggtcaacccagactgtgggcttaagactcgcaagtatgctgaggttaagccagcactcagtgctatggttgctgctgccaagcaactccgcactcagcttgccagtgctaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0003871 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006520 GO:0006555 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008168 GO:0008172 GO:0008270 GO:0008652 GO:0008705 GO:0009058 GO:0009066 GO:0009067 GO:0009086 GO:0009506 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0016020 GO:0016053 GO:0016740 GO:0016741 GO:0019752 GO:0030054 GO:0031090 GO:0031967 GO:0031975 GO:0032259 GO:0042084 GO:0042085 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050667 GO:0050896 GO:0055044 GO:0071704 GO:0071944 GO:0098588 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00450 ko01100 ko01110 ko01230 map00270 map00450 map01100 map01110 map01230

Pfam Domains

Protein Families

Meth_synt_1 Meth_synt_2

Protein Analysis

799

Amino Acids

88.25

Weight (kDa)

6.16

Isoelectric Point (pI)

37.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03780 AT3G03780 AT3G03780 AT5G17920 AT5G17920
fragaria_vesca	FvH4_1g28390 FvH4_1g28390 FvH4_1g28390 FvH4_1g28390 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260
malus_domestica	MD12G1008100.v1.1 MD14G1005500.v1.1
prunus_persica	Prupe.7G009200_v2.0.a1 Prupe.7G009200_v2.0.a1 Prupe.7G009200_v2.0.a1
pyrus_communis	pycom12g00610 pycom14g00410
rosa_chinensis	RchiOBHm_Chr3g0496511
rosa_laevigata	RLG00000022522
rosa_multiflora	Rmu_sc0000620.1_g000008
rosa_roxburghii	Rroxscaffold_6G00389060
rosa_rugosa	Rorug03G0283400 Rorug03G0283500
rosa_samantha	Rh3AG329600 Rh3BG365100 Rh3CG362500 Rh3DG365600
rosa_wichuraiana	Rw3G028830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1067, 1553
Acc36I	ACCTGC	1 cut(s)	853
AccB7I	CCANNNNNTGG	3 cut(s)	43, 347, 2300
AccII	CGCG	1 cut(s)	2154
AciI	CCGC	5 cut(s)	417, 1702, 1756, 2152, 2374
AclI	AACGTT	1 cut(s)	2007
AclWI	GGATC	6 cut(s)	269, 747, 1423, 1666, 1887, 2006
AcoI	YGGCCR	3 cut(s)	45, 393, 1857
AcsI	RAATTY	3 cut(s)	488, 1173, 2116
AcuI	CTGAAG	1 cut(s)	1517
AcyI	GRCGYC	1 cut(s)	107
AdeI	CACNNNGTG	1 cut(s)	2345
AfaI	GTAC	3 cut(s)	843, 1027, 1598
AfeI	AGCGCT	1 cut(s)	540
AflII	CTTAAG	2 cut(s)	686, 2306
AflIII	ACRYGT	1 cut(s)	2043
AjnI	CCWGG	4 cut(s)	10, 64, 1826, 2185
AjuI	GAANNNNNNNTTGG	6 cut(s)	440, 472, 979, 1011, 1035, 1067
Alw21I	GWGCWC	1 cut(s)	153
Alw26I	GTCTC	6 cut(s)	114, 818, 1078, 1115, 1829, 2264
AlwI	GGATC	6 cut(s)	269, 747, 1423, 1666, 1887, 2006
AlwNI	CAGNNNCTG	1 cut(s)	1784
Ama87I	CYCGRG	1 cut(s)	1883
Aor51HI	AGCGCT	1 cut(s)	540
AoxI	GGCC	8 cut(s)	45, 136, 393, 1464, 1497, 1780, 1857, 1980
ApaI	GGGCCC	1 cut(s)	140
ApoI	RAATTY	3 cut(s)	488, 1173, 2116
AspLEI	GCGC	1 cut(s)	541
AspS9I	GGNCC	9 cut(s)	62, 136, 137, 476, 572, 1781, 1803, 1980, 2183
AsuC2I	CCSGG	1 cut(s)	259
AsuHPI	GGTGA	4 cut(s)	374, 1291, 1703, 1993
AsuII	TTCGAA	1 cut(s)	24
AvaI	CYCGRG	1 cut(s)	1883
AvaII	GGWCC	5 cut(s)	62, 476, 572, 1803, 2183
BaeGI	GKGCMC	1 cut(s)	140
BaeI	ACNNNNGTAYC	2 cut(s)	115, 148
BalI	TGGCCA	3 cut(s)	47, 395, 1859
BanII	GRGCYC	3 cut(s)	140, 153, 726
BbsI	GAAGAC	3 cut(s)	222, 1085, 2140
Bbv12I	GWGCWC	1 cut(s)	153
BbvCI	CCTCAGC	1 cut(s)	2325
BceAI	ACGGC	2 cut(s)	1437, 1967
BcgI	CGANNNNNNTGC	2 cut(s)	2075, 2109
BciT130I	CCWGG	4 cut(s)	12, 66, 1828, 2187
BciVI	GTATCC	2 cut(s)	116, 544
BclI	TGATCA	1 cut(s)	2103
BcnI	CCSGG	1 cut(s)	259
BcoDI	GTCTC	6 cut(s)	114, 818, 1078, 1115, 1829, 2264
BfaI	CTAG	4 cut(s)	17, 276, 644, 788
BfmI	CTRYAG	1 cut(s)	1245
BfoI	RGCGCY	1 cut(s)	542
BfrI	CTTAAG	2 cut(s)	686, 2306
BfuAI	ACCTGC	1 cut(s)	853
BfuI	GTATCC	2 cut(s)	116, 544
BglII	AGATCT	1 cut(s)	1473
BlpI	GCTNAGC	1 cut(s)	1368
BmcAI	AGTACT	1 cut(s)	1598
Bme1390I	CCNGG	5 cut(s)	12, 66, 259, 1828, 2187
Bme18I	GGWCC	5 cut(s)	62, 476, 572, 1803, 2183
BmeT110I	CYCGRG	1 cut(s)	1883
BmgT120I	GGNCC	9 cut(s)	62, 136, 137, 476, 572, 1781, 1803, 1980, 2183
BmiI	GGNNCC	6 cut(s)	6, 63, 138, 139, 477, 1572
BmrFI	CCNGG	5 cut(s)	12, 66, 259, 1828, 2187
BmrI	ACTGGG	2 cut(s)	554, 1987
BmsI	GCATC	5 cut(s)	244, 763, 1354, 2083, 2244
BmuI	ACTGGG	2 cut(s)	554, 1987
BoxI	GACNNNNGTC	1 cut(s)	1332
BpiI	GAAGAC	3 cut(s)	222, 1085, 2140
BpmI	CTGGAG	1 cut(s)	717
Bpu10I	CCTNAGC	1 cut(s)	2325
Bpu1102I	GCTNAGC	1 cut(s)	1368
Bpu14I	TTCGAA	1 cut(s)	24
BpuEI	CTTGAG	4 cut(s)	137, 947, 1219, 2288
BpuMI	CCSGG	1 cut(s)	259
BsaAI	YACGTR	1 cut(s)	381
BsaHI	GRCGYC	1 cut(s)	107
BsaI	GGTCTC	1 cut(s)	818
BsaJI	CCNNGG	6 cut(s)	10, 42, 162, 390, 1274, 1826
Bse1I	ACTGG	7 cut(s)	301, 560, 575, 1391, 1805, 1982, 2388
Bse3DI	GCAATG	2 cut(s)	327, 1028
BseBI	CCWGG	4 cut(s)	12, 66, 1828, 2187
BseDI	CCNNGG	6 cut(s)	10, 42, 162, 390, 1274, 1826
BseGI	GGATG	7 cut(s)	37, 184, 1225, 1791, 1873, 2070, 2098
BseMI	GCAATG	2 cut(s)	327, 1028
BseNI	ACTGG	7 cut(s)	301, 560, 575, 1391, 1805, 1982, 2388
BseRI	GAGGAG	3 cut(s)	1496, 1499, 2243
BseSI	GKGCMC	1 cut(s)	140
BsgI	GTGCAG	2 cut(s)	831, 1149
Bsh1236I	CGCG	1 cut(s)	2154
BshFI	GGCC	8 cut(s)	47, 138, 395, 1466, 1499, 1782, 1859, 1982
BsiHKAI	GWGCWC	1 cut(s)	153
BsiHKCI	CYCGRG	1 cut(s)	1883
BsiSI	CCGG	1 cut(s)	258
BslFI	GGGAC	3 cut(s)	75, 449, 1255
BsmAI	GTCTC	6 cut(s)	114, 818, 1078, 1115, 1829, 2264
BsmBI	CGTCTC	2 cut(s)	114, 1078
BsmFI	GGGAC	3 cut(s)	75, 449, 1255
BsmI	GAATGC	3 cut(s)	764, 1776, 1987
BsnI	GGCC	8 cut(s)	47, 138, 395, 1466, 1499, 1782, 1859, 1982
Bso31I	GGTCTC	1 cut(s)	818
BsoBI	CYCGRG	1 cut(s)	1883
Bsp119I	TTCGAA	1 cut(s)	24
Bsp120I	GGGCCC	1 cut(s)	136
Bsp1286I	GDGCHC	3 cut(s)	140, 153, 726
Bsp1720I	GCTNAGC	1 cut(s)	1368
Bsp19I	CCATGG	1 cut(s)	390
BspACI	CCGC	5 cut(s)	417, 1702, 1756, 2152, 2374
BspANI	GGCC	8 cut(s)	47, 138, 395, 1466, 1499, 1782, 1859, 1982
BspFNI	CGCG	1 cut(s)	2154
BspLI	GGNNCC	6 cut(s)	6, 63, 138, 139, 477, 1572
BspMAI	CTGCAG	1 cut(s)	1249
BspMI	ACCTGC	1 cut(s)	853
BspPI	GGATC	6 cut(s)	269, 747, 1423, 1666, 1887, 2006
BspQI	GCTCTTC	1 cut(s)	1533
BspT104I	TTCGAA	1 cut(s)	24
BspTI	CTTAAG	2 cut(s)	686, 2306
BspTNI	GGTCTC	1 cut(s)	818
BsrDI	GCAATG	2 cut(s)	327, 1028
BsrI	ACTGG	7 cut(s)	301, 560, 575, 1391, 1805, 1982, 2388
BssECI	CCNNGG	6 cut(s)	10, 42, 162, 390, 1274, 1826
BssNI	GRCGYC	1 cut(s)	107
BssT1I	CCWWGG	3 cut(s)	162, 390, 1274
Bst2UI	CCWGG	4 cut(s)	12, 66, 1828, 2187
Bst4CI	ACNGT	3 cut(s)	1633, 1720, 2300
Bst6I	CTCTTC	2 cut(s)	645, 1533
BstACI	GRCGYC	1 cut(s)	107
BstAFI	CTTAAG	2 cut(s)	686, 2306
BstAPI	GCANNNNNTGC	1 cut(s)	2345
BstBAI	YACGTR	1 cut(s)	381
BstBI	TTCGAA	1 cut(s)	24
BstC8I	GCNNGC	9 cut(s)	49, 762, 1035, 1155, 1756, 1962, 2259, 2337, 2385
BstDSI	CCRYGG	2 cut(s)	42, 390
BstEII	GGTNACC	1 cut(s)	1279
BstF5I	GGATG	7 cut(s)	37, 184, 1225, 1791, 1873, 2070, 2098
BstFNI	CGCG	1 cut(s)	2154
BstH2I	RGCGCY	1 cut(s)	542
BstHHI	GCGC	1 cut(s)	541
BstMAI	GTCTC	6 cut(s)	114, 818, 1078, 1115, 1829, 2264
BstMWI	GCNNNNNNNGC	8 cut(s)	698, 1053, 1163, 1253, 1310, 1378, 2345, 2354
BstNI	CCWGG	4 cut(s)	12, 66, 1828, 2187
BstNSI	RCATGY	1 cut(s)	2047
BstPAI	GACNNNNGTC	1 cut(s)	1332
BstPI	GGTNACC	1 cut(s)	1279
BstSCI	CCNGG	5 cut(s)	10, 64, 257, 1826, 2185
BstSFI	CTRYAG	1 cut(s)	1245
BstSLI	GKGCMC	1 cut(s)	140
BstUI	CGCG	1 cut(s)	2154
BstV2I	GAAGAC	3 cut(s)	222, 1085, 2140
BstX2I	RGATCY	4 cut(s)	739, 1473, 1658, 1879
BstYI	RGATCY	4 cut(s)	739, 1473, 1658, 1879
BsuI	GTATCC	2 cut(s)	116, 544
BsuRI	GGCC	8 cut(s)	47, 138, 395, 1466, 1499, 1782, 1859, 1982
BtgI	CCRYGG	2 cut(s)	42, 390
BtsCI	GGATG	7 cut(s)	37, 184, 1225, 1791, 1873, 2070, 2098
BtsI	GCAGTG	4 cut(s)	196, 315, 885, 1098
BtsIMutI	CAGTG	8 cut(s)	196, 315, 582, 768, 885, 1098, 2350, 2395
BveI	ACCTGC	1 cut(s)	853
Cac8I	GCNNGC	9 cut(s)	49, 762, 1035, 1155, 1756, 1962, 2259, 2337, 2385
CaiI	CAGNNNCTG	1 cut(s)	1784
CfoI	GCGC	1 cut(s)	541
Cfr13I	GGNCC	9 cut(s)	62, 136, 137, 476, 572, 1781, 1803, 1980, 2183
CseI	GACGC	1 cut(s)	96
CsiI	ACCWGGT	1 cut(s)	64
Csp6I	GTAC	3 cut(s)	842, 1026, 1597
CviAII	CATG	8 cut(s)	265, 391, 705, 1565, 1588, 1747, 2044, 2089
CviQI	GTAC	3 cut(s)	842, 1026, 1597
DraIII	CACNNNGTG	1 cut(s)	2345
DrdI	GACNNNNNNGTC	2 cut(s)	1067, 1553
DseDI	GACNNNNNNGTC	2 cut(s)	1067, 1553
EaeI	YGGCCR	3 cut(s)	45, 393, 1857
Eam1104I	CTCTTC	2 cut(s)	645, 1533
EarI	CTCTTC	2 cut(s)	645, 1533
Ecl136II	GAGCTC	1 cut(s)	151
Eco130I	CCWWGG	3 cut(s)	162, 390, 1274
Eco24I	GRGCYC	3 cut(s)	140, 153, 726
Eco31I	GGTCTC	1 cut(s)	818
Eco32I	GATATC	1 cut(s)	2200
Eco47I	GGWCC	5 cut(s)	62, 476, 572, 1803, 2183
Eco47III	AGCGCT	1 cut(s)	540
Eco53kI	GAGCTC	1 cut(s)	151
Eco57I	CTGAAG	1 cut(s)	1517
Eco88I	CYCGRG	1 cut(s)	1883
Eco91I	GGTNACC	1 cut(s)	1279
EcoICRI	GAGCTC	1 cut(s)	151
EcoO109I	RGGNCCY	4 cut(s)	62, 137, 476, 1781
EcoO65I	GGTNACC	1 cut(s)	1279
EcoRI	GAATTC	1 cut(s)	2116
EcoRII	CCWGG	4 cut(s)	10, 64, 1826, 2185
EcoRV	GATATC	1 cut(s)	2200
EcoT14I	CCWWGG	3 cut(s)	162, 390, 1274
EcoT38I	GRGCYC	3 cut(s)	140, 153, 726
ErhI	CCWWGG	3 cut(s)	162, 390, 1274
Esp3I	CGTCTC	2 cut(s)	114, 1078
FaeI	CATG	8 cut(s)	268, 394, 708, 1568, 1591, 1750, 2047, 2092
FalI	AAGNNNNNCTT	8 cut(s)	146, 178, 929, 961, 950, 982, 1050, 1082
FaqI	GGGAC	3 cut(s)	75, 449, 1255
FatI	CATG	8 cut(s)	264, 390, 704, 1564, 1587, 1746, 2043, 2088
FauI	CCCGC	2 cut(s)	424, 1763
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	1 cut(s)	2103
FokI	GGATG	7 cut(s)	24, 191, 1232, 1778, 1880, 2057, 2105
FriOI	GRGCYC	3 cut(s)	140, 153, 726
FspBI	CTAG	4 cut(s)	17, 276, 644, 788
GlaI	GCGC	1 cut(s)	540
GsuI	CTGGAG	1 cut(s)	717
HaeII	RGCGCY	1 cut(s)	542
HaeIII	GGCC	8 cut(s)	47, 138, 395, 1466, 1499, 1782, 1859, 1982
HapII	CCGG	1 cut(s)	258
HgaI	GACGC	1 cut(s)	96
HhaI	GCGC	1 cut(s)	541
Hin1I	GRCGYC	1 cut(s)	107
Hin1II	CATG	8 cut(s)	268, 394, 708, 1568, 1591, 1750, 2047, 2092
Hin6I	GCGC	1 cut(s)	539
HinP1I	GCGC	1 cut(s)	539
HincII	GTYRAC	3 cut(s)	795, 1819, 2290
HindII	GTYRAC	3 cut(s)	795, 1819, 2290
HindIII	AAGCTT	2 cut(s)	1379, 1529
HinfI	GANTC	9 cut(s)	26, 167, 709, 746, 791, 862, 1223, 2032, 2311
HpaII	CCGG	1 cut(s)	258
HphI	GGTGA	4 cut(s)	374, 1291, 1703, 1993
Hpy166II	GTNNAC	3 cut(s)	795, 1819, 2290
Hpy8I	GTNNAC	3 cut(s)	795, 1819, 2290
Hpy99I	CGWCG	1 cut(s)	1338
HpyAV	CCTTC	7 cut(s)	871, 981, 1037, 1312, 1437, 1759, 1928
HpyCH4III	ACNGT	3 cut(s)	1633, 1720, 2300
HpyCH4IV	ACGT	2 cut(s)	380, 2007
HpyF10VI	GCNNNNNNNGC	8 cut(s)	698, 1053, 1163, 1253, 1310, 1378, 2345, 2354
HpySE526I	ACGT	2 cut(s)	380, 2007
Hsp92I	GRCGYC	1 cut(s)	107
Hsp92II	CATG	8 cut(s)	268, 394, 708, 1568, 1591, 1750, 2047, 2092
HspAI	GCGC	1 cut(s)	539
Ksp22I	TGATCA	1 cut(s)	2103
LguI	GCTCTTC	1 cut(s)	1533
LmnI	GCTCC	5 cut(s)	39, 698, 1570, 1606, 2142
LweI	GCATC	5 cut(s)	244, 763, 1354, 2083, 2244
MabI	ACCWGGT	1 cut(s)	64
MaeI	CTAG	4 cut(s)	17, 276, 644, 788
MaeII	ACGT	2 cut(s)	380, 2007
MaeIII	GTNAC	5 cut(s)	577, 883, 1211, 1279, 1786
MboII	GAAGA	8 cut(s)	209, 222, 632, 1085, 1379, 1387, 1550, 2140
MflI	RGATCY	4 cut(s)	739, 1473, 1658, 1879
MhlI	GDGCHC	3 cut(s)	140, 153, 726
MlsI	TGGCCA	3 cut(s)	47, 395, 1859
MluCI	AATT	7 cut(s)	488, 933, 1173, 1512, 1610, 1911, 2116
MluNI	TGGCCA	3 cut(s)	47, 395, 1859
MlyI	GAGTC	4 cut(s)	800, 856, 1232, 2305
MmeI	TCCRAC	3 cut(s)	100, 332, 2079
Mox20I	TGGCCA	3 cut(s)	47, 395, 1859
MscI	TGGCCA	3 cut(s)	47, 395, 1859
MslI	CAYNNNNRTG	5 cut(s)	320, 1218, 1335, 2042, 2087
Msp20I	TGGCCA	3 cut(s)	47, 395, 1859
MspA1I	CMGCKG	1 cut(s)	695
MspCI	CTTAAG	2 cut(s)	686, 2306
MspI	CCGG	1 cut(s)	258
MspR9I	CCNGG	5 cut(s)	12, 66, 259, 1828, 2187
Mva1269I	GAATGC	3 cut(s)	764, 1776, 1987
MvaI	CCWGG	4 cut(s)	12, 66, 1828, 2187
MvnI	CGCG	1 cut(s)	2154
MwoI	GCNNNNNNNGC	8 cut(s)	698, 1053, 1163, 1253, 1310, 1378, 2345, 2354
NciI	CCSGG	1 cut(s)	259
NcoI	CCATGG	1 cut(s)	390
NdeI	CATATG	1 cut(s)	496
NlaIII	CATG	8 cut(s)	268, 394, 708, 1568, 1591, 1750, 2047, 2092
NlaIV	GGNNCC	6 cut(s)	6, 63, 138, 139, 477, 1572
NmuCI	GTSAC	4 cut(s)	577, 883, 1211, 1279
NspI	RCATGY	1 cut(s)	2047
NspV	TTCGAA	1 cut(s)	24
PacI	TTAATTAA	1 cut(s)	936
PaeR7I	CTCGAG	1 cut(s)	1883
PciI	ACATGT	1 cut(s)	2043
PciSI	GCTCTTC	1 cut(s)	1533
PctI	GAATGC	3 cut(s)	764, 1776, 1987
PfeI	GAWTC	5 cut(s)	26, 167, 709, 746, 2032
PflFI	GACNNNGTC	1 cut(s)	66
PflMI	CCANNNNNTGG	3 cut(s)	43, 347, 2300
PleI	GAGTC	4 cut(s)	799, 856, 1231, 2305
PpsI	GAGTC	4 cut(s)	799, 856, 1231, 2305
Ppu21I	YACGTR	1 cut(s)	381
PpuMI	RGGWCCY	2 cut(s)	62, 476
PscI	ACATGT	1 cut(s)	2043
PshAI	GACNNNNGTC	1 cut(s)	1332
Psp124BI	GAGCTC	1 cut(s)	153
Psp1406I	AACGTT	1 cut(s)	2007
Psp5II	RGGWCCY	2 cut(s)	62, 476
Psp6I	CCWGG	4 cut(s)	10, 64, 1826, 2185
PspEI	GGTNACC	1 cut(s)	1279
PspGI	CCWGG	4 cut(s)	10, 64, 1826, 2185
PspN4I	GGNNCC	6 cut(s)	6, 63, 138, 139, 477, 1572
PspOMI	GGGCCC	1 cut(s)	136
PspPI	GGNCC	9 cut(s)	62, 136, 137, 476, 572, 1781, 1803, 1980, 2183
PspPPI	RGGWCCY	2 cut(s)	62, 476
PstI	CTGCAG	1 cut(s)	1249
PstNI	CAGNNNCTG	1 cut(s)	1784
PsuI	RGATCY	4 cut(s)	739, 1473, 1658, 1879
PsyI	GACNNNGTC	1 cut(s)	66
PvuII	CAGCTG	1 cut(s)	695
RsaI	GTAC	3 cut(s)	843, 1027, 1598
RsaNI	GTAC	3 cut(s)	842, 1026, 1597
RseI	CAYNNNNRTG	5 cut(s)	320, 1218, 1335, 2042, 2087
SacI	GAGCTC	1 cut(s)	153
SapI	GCTCTTC	1 cut(s)	1533
Sau96I	GGNCC	9 cut(s)	62, 136, 137, 476, 572, 1781, 1803, 1980, 2183
ScaI	AGTACT	1 cut(s)	1598
SchI	GAGTC	4 cut(s)	800, 856, 1232, 2305
ScrFI	CCNGG	5 cut(s)	12, 66, 259, 1828, 2187
SduI	GDGCHC	3 cut(s)	140, 153, 726
SexAI	ACCWGGT	1 cut(s)	64
SfaNI	GCATC	5 cut(s)	244, 763, 1354, 2083, 2244
SfcI	CTRYAG	1 cut(s)	1245
Sfr274I	CTCGAG	1 cut(s)	1883
SfuI	TTCGAA	1 cut(s)	24
SinI	GGWCC	5 cut(s)	62, 476, 572, 1803, 2183
SlaI	CTCGAG	1 cut(s)	1883
SmiMI	CAYNNNNRTG	5 cut(s)	320, 1218, 1335, 2042, 2087
SmlI	CTYRAG	7 cut(s)	152, 686, 926, 1234, 1883, 2267, 2306
SmoI	CTYRAG	7 cut(s)	152, 686, 926, 1234, 1883, 2267, 2306
Sse9I	AATT	7 cut(s)	488, 933, 1173, 1512, 1610, 1911, 2116
SsiI	CCGC	5 cut(s)	417, 1702, 1756, 2152, 2374
SspMI	CTAG	4 cut(s)	17, 276, 644, 788
SstI	GAGCTC	1 cut(s)	153
StyD4I	CCNGG	5 cut(s)	10, 64, 257, 1826, 2185
StyI	CCWWGG	3 cut(s)	162, 390, 1274
TaaI	ACNGT	3 cut(s)	1633, 1720, 2300
TaiI	ACGT	2 cut(s)	383, 2010
TaqI	TCGA	6 cut(s)	24, 441, 1434, 1663, 1884, 2085
TaqII	GACCGA	1 cut(s)	2134
TasI	AATT	7 cut(s)	488, 933, 1173, 1512, 1610, 1911, 2116
TatI	WGTACW	2 cut(s)	1025, 1596
TauI	GCSGC	1 cut(s)	1704
TfiI	GAWTC	5 cut(s)	26, 167, 709, 746, 2032
TscAI	CASTG	8 cut(s)	196, 322, 582, 775, 892, 1105, 2350, 2395
TseFI	GTSAC	4 cut(s)	577, 883, 1211, 1279
Tsp45I	GTSAC	4 cut(s)	577, 883, 1211, 1279
TspDTI	ATGAA	7 cut(s)	448, 693, 1152, 1553, 1778, 1884, 1980
TspRI	CASTG	8 cut(s)	196, 322, 582, 775, 892, 1105, 2350, 2395
Tth111I	GACNNNGTC	1 cut(s)	66
Van91I	CCANNNNNTGG	3 cut(s)	43, 347, 2300
Vha464I	CTTAAG	2 cut(s)	686, 2306
VpaK11BI	GGWCC	5 cut(s)	62, 476, 572, 1803, 2183
XapI	RAATTY	3 cut(s)	488, 1173, 2116
XbaI	TCTAGA	1 cut(s)	16
XceI	RCATGY	1 cut(s)	2047
XcmI	CCANNNNNNNNNTGG	2 cut(s)	348, 733
XhoI	CTCGAG	1 cut(s)	1883
XspI	CTAG	4 cut(s)	17, 276, 644, 788
ZrmI	AGTACT	1 cut(s)	1598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.