Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0004023

Physical Location & Seq

Genomic Coordinates Forward (+)

28463813 .. 28469744

Gene Structure 5932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0283400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGTACTGAGCGGGAGGAAAGGGAAGGACATTGCGAGATTGGCCAAAGGCTTGTCTCTAATCGCCGAGGAATTTGCGAAGCGATCTCCGACTCTCCAGAGCGCCAAGAACGGCGATTTCCAAGCCCTACTCAAAAACGCCGTCGTTTCCGCCACCGACCTCTCCGGCCTCACCAAAGGCACCCTCTCCCAATTCTCCAACGCTCCTTCTAACCCTACCTCCGCCGGTCCCACTGCTAACAAACCCGATTCCGTCGTCTACTTCAACCACCACCACGAACCTCCTCCTCCTCCTCCTCAGCCGCCGCAGCTTGAAGAACAACCGCCGCCGCCGGCAAACAATGCCGCTTCCTCCGTGGAGGTGGAGGTGCTCGATTCGAGGGCTCAACAACCGTTAGAACCAGAGACACAGTCGCCACAACCACAACCTCCGCCGCCGCCATTGCAGAGGCGGAAGCCCAGAGAGAGACGAGTTCCTTCCACTCCTTTCTCTAGAGCACTGGGGTTTGCTGGTCTGGGAGCTGGGCTTGCCTGGGGAACACTTCAGGAGTCTACCAAGAGACTCATTTACGGCACGCCGCAGAGCTCACCGGGCAACCAGTCTGCTGTTTCTCCGTTTTTGTCTCCACAGAATGCAGAGCGTTTGGCTCTTGCACTCTGTCGAATGCGAGGAGCTGCTCTCAAATTGGGGCAGATGTTGAGCATACAGGACGAATCGCTTGTGCCTGCTCCTATATTGGCTGCTCTCGATATTGTTCGTCAAGGTGCTGATGTGATGCCGAGGGCCCAGCTCAATCAGGTTCTGGATGCTGAGTTAGGACCTGGTTGGTCATCAAAGTTAACAAGTTTCGATTATGAACCTTTGGCTTCTGCAAGTATAGGCCAGGTGCACCGCGCTGTCACCAAGGACGGCATGGATGTTGCCATTAAAATTCAGTACCCTGGTGTAGCAGATAGCATTGGCAGTGACATCGAAAACGTTAAACTTCTTCTAGATTATACTAATCTAATTCCAAAAGGACTTTACCTTGAAAGAGCTATGAAGGTGGCCAAAGAAGAATTATCTCGTGAATGCAACTATGAATTGGAAGCAGAAAGTCAAAAACGGTTTCGTGATTTGCTCTCTGATGCACAGGGGTTTTATGTTCCGTTGGTTGTGGATGATATATCAAACAAAAGAGTTTTAACTACTGAGCTTGTGTCTGGAATACCTATTGATAAAGTGGCGTTATTGAACCAGGAAACTCGTAACTATGTTGGAAGAAAGTTGCTAGAACTCACTTTGGAAGAGTTATTTGTTTTCCGCTTCATGCAGACTGATCCTAATTGGAGTAATTTCTTGTATGACGAGGCTACAAATACAATCAATCTGATAGACTTTGGAGCAGCTAGGGATTATCCCAAGACTTTTGTTGATGACTATCTAAGAATGGTTGTTGCCTGTGCGAATGGTGACAGAGATACAGTCATCGAAATGTCCAAGAGACTTGGATTCCTCGCAGGAATGGAATCAGAAGTAATGTTAGAGGCTCATGTCCAAGCCGGTTTTGTTGTGGGATTGCCATTTGCAAAGCCTGGTGGGTATGACTTCCGGGCATCCAATATCACCCAAAGCATTTCAAACCTTGGGGCAACCATGCTACAGCACAGGCTCACCCCACCGCCGGATGAGGCGTACAGTCTTCATCGCAAGCTTGCAGGTGCCTTTCTGGCTTGCATCAAGCTAGGGGCCGTTGTCCCGTGCAGGGAACTATTACTTGACGTATATGAGCGTCATCAATTTGGTGACGAAGGCGGTGAAATATTGTCGAGTGGATTGGCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0003871 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006520 GO:0006555 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008168 GO:0008172 GO:0008270 GO:0008652 GO:0008705 GO:0009058 GO:0009066 GO:0009067 GO:0009086 GO:0009506 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0016020 GO:0016053 GO:0016740 GO:0016741 GO:0019752 GO:0030054 GO:0031090 GO:0031967 GO:0031975 GO:0032259 GO:0042084 GO:0042085 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050667 GO:0050896 GO:0055044 GO:0071704 GO:0071944 GO:0098588 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00450 ko01100 ko01110 ko01230 map00270 map00450 map01100 map01110 map01230

Pfam Domains

Protein Families

Meth_synt_1 Meth_synt_2

Protein Analysis

608

Amino Acids

66.23

Weight (kDa)

5.6

Isoelectric Point (pI)

47.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	252 - 493	3.6e-74	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03780 AT3G03780 AT3G03780 AT5G17920 AT5G17920
fragaria_vesca	FvH4_1g28390 FvH4_1g28390 FvH4_1g28390 FvH4_1g28390 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260 FvH4_2g41260
malus_domestica	MD12G1008100.v1.1 MD14G1005500.v1.1
prunus_persica	Prupe.7G009200_v2.0.a1 Prupe.7G009200_v2.0.a1 Prupe.7G009200_v2.0.a1
pyrus_communis	pycom12g00610 pycom14g00410
rosa_chinensis	RchiOBHm_Chr3g0496511
rosa_laevigata	RLG00000022522
rosa_multiflora	Rmu_sc0000620.1_g000008
rosa_roxburghii	Rroxscaffold_6G00389060
rosa_rugosa	Rorug03G0283400 Rorug03G0283500
rosa_samantha	Rh3AG329600 Rh3BG365100 Rh3CG362500 Rh3DG365600
rosa_wichuraiana	Rw3G028830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1688
Acc36I	ACCTGC	1 cut(s)	1688
AccB1I	GGYRCC	2 cut(s)	179, 1700
AccBSI	CCGCTC	1 cut(s)	12
AccI	GTMKAC	2 cut(s)	258, 551
AccII	CGCG	1 cut(s)	894
AclI	AACGTT	1 cut(s)	978
AclWI	GGATC	1 cut(s)	1313
AcoI	YGGCCR	2 cut(s)	42, 1047
AcsI	RAATTY	2 cut(s)	71, 930
AcuI	CTGAAG	1 cut(s)	527
AfaI	GTAC	3 cut(s)	6, 938, 1676
AfiI	CCNNNNNNNGG	2 cut(s)	1663, 1744
AgsI	TTSAA	5 cut(s)	265, 314, 1031, 1234, 1620
AjnI	CCWGG	6 cut(s)	530, 820, 882, 940, 1236, 1573
Alw21I	GWGCWC	4 cut(s)	372, 499, 587, 891
Alw26I	GTCTC	6 cut(s)	60, 398, 460, 553, 627, 1477
Alw44I	GTGCAC	1 cut(s)	887
AlwI	GGATC	1 cut(s)	1313
AlwNI	CAGNNNCTG	1 cut(s)	802
AoxI	GGCC	6 cut(s)	42, 166, 783, 880, 1047, 1728
ApaI	GGGCCC	1 cut(s)	787
ApaLI	GTGCAC	1 cut(s)	887
ApeKI	GCWGC	4 cut(s)	307, 674, 740, 1385
ApoI	RAATTY	2 cut(s)	71, 930
ArsI	GACNNNNNNTTYG	2 cut(s)	126, 158
AspLEI	GCGC	2 cut(s)	104, 896
AspS9I	GGNCC	5 cut(s)	227, 783, 784, 818, 1728
AsuC2I	CCSGG	2 cut(s)	591, 1592
AsuHPI	GGTGA	8 cut(s)	163, 579, 892, 1463, 1597, 1645, 1796, 1808
AvaII	GGWCC	2 cut(s)	227, 818
BaeGI	GKGCMC	2 cut(s)	787, 891
BalI	TGGCCA	2 cut(s)	44, 1049
BanI	GGYRCC	2 cut(s)	179, 1700
BanII	GRGCYC	3 cut(s)	385, 587, 787
BauI	CACGAG	1 cut(s)	1065
BbsI	GAAGAC	1 cut(s)	1673
Bbv12I	GWGCWC	4 cut(s)	372, 499, 587, 891
BbvCI	CCTCAGC	1 cut(s)	297
BbvI	GCAGC	4 cut(s)	319, 661, 727, 1397
BceAI	ACGGC	5 cut(s)	125, 127, 586, 925, 1715
BcgI	CGANNNNNNTGC	4 cut(s)	56, 90, 952, 986
BciT130I	CCWGG	6 cut(s)	532, 822, 884, 942, 1238, 1575
BcnI	CCSGG	2 cut(s)	591, 1592
BcoDI	GTCTC	6 cut(s)	60, 398, 460, 553, 627, 1477
BfaI	CTAG	5 cut(s)	492, 992, 1271, 1389, 1724
BfmI	CTRYAG	1 cut(s)	1640
BfoI	RGCGCY	1 cut(s)	105
BfuAI	ACCTGC	1 cut(s)	1688
BglI	GCCNNNNNGGC	1 cut(s)	1709
Bme1390I	CCNGG	8 cut(s)	532, 591, 822, 884, 942, 1238, 1575, 1592
Bme18I	GGWCC	2 cut(s)	227, 818
BmgT120I	GGNCC	5 cut(s)	227, 783, 784, 818, 1728
BmiI	GGNNCC	5 cut(s)	181, 229, 785, 1702, 1729
BmrFI	CCNGG	8 cut(s)	532, 591, 822, 884, 942, 1238, 1575, 1592
BmrI	ACTGGG	1 cut(s)	509
BmsI	GCATC	5 cut(s)	765, 796, 1117, 1604, 1725
BmuI	ACTGGG	1 cut(s)	509
BpiI	GAAGAC	1 cut(s)	1673
BplI	GAGNNNNNCTC	2 cut(s)	663, 695
BpmI	CTGGAG	1 cut(s)	80
Bpu10I	CCTNAGC	1 cut(s)	297
BpuMI	CCSGG	2 cut(s)	591, 1592
BsaBI	GATNNNNATC	1 cut(s)	1419
BsaJI	CCNNGG	7 cut(s)	66, 354, 531, 779, 903, 940, 1624
BsaXI	ACNNNNNCTCC	2 cut(s)	203, 233
Bsc4I	CCNNNNNNNGG	2 cut(s)	1663, 1744
Bse118I	RCCGGY	3 cut(s)	224, 331, 1541
Bse1I	ACTGG	2 cut(s)	504, 598
Bse3DI	GCAATG	2 cut(s)	30, 440
Bse8I	GATNNNNATC	1 cut(s)	1419
BseBI	CCWGG	6 cut(s)	532, 822, 884, 942, 1238, 1575
BseDI	CCNNGG	7 cut(s)	66, 354, 531, 779, 903, 940, 1624
BseGI	GGATG	5 cut(s)	811, 922, 1165, 1595, 1672
BseJI	GATNNNNATC	1 cut(s)	1419
BseLI	CCNNNNNNNGG	2 cut(s)	1663, 1744
BseMI	GCAATG	2 cut(s)	30, 440
BseMII	CTCAG	3 cut(s)	311, 801, 1182
BseNI	ACTGG	2 cut(s)	504, 598
BseRI	GAGGAG	6 cut(s)	273, 276, 279, 282, 285, 684
BseSI	GKGCMC	2 cut(s)	787, 891
BseXI	GCAGC	4 cut(s)	319, 661, 727, 1397
BseYI	CCCAGC	2 cut(s)	521, 786
BsgI	GTGCAG	1 cut(s)	1762
Bsh1236I	CGCG	1 cut(s)	894
BshFI	GGCC	6 cut(s)	44, 168, 785, 882, 1049, 1730
BshNI	GGYRCC	2 cut(s)	179, 1700
BsiHKAI	GWGCWC	4 cut(s)	372, 499, 587, 891
BsiSI	CCGG	7 cut(s)	165, 225, 332, 590, 1542, 1591, 1664
BslFI	GGGAC	2 cut(s)	213, 1721
BslI	CCNNNNNNNGG	2 cut(s)	1663, 1744
BsmAI	GTCTC	6 cut(s)	60, 398, 460, 553, 627, 1477
BsmBI	CGTCTC	1 cut(s)	460
BsmFI	GGGAC	2 cut(s)	213, 1721
BsmI	GAATGC	3 cut(s)	637, 669, 1076
BsnI	GGCC	6 cut(s)	44, 168, 785, 882, 1049, 1730
Bsp120I	GGGCCC	1 cut(s)	783
Bsp1286I	GDGCHC	6 cut(s)	372, 385, 499, 587, 787, 891
Bsp143I	GATC	2 cut(s)	83, 1318
BspANI	GGCC	6 cut(s)	44, 168, 785, 882, 1049, 1730
BspCNI	CTCAG	3 cut(s)	310, 802, 1183
BspFNI	CGCG	1 cut(s)	894
BspHI	TCATGA	1 cut(s)	1823
BspLI	GGNNCC	5 cut(s)	181, 229, 785, 1702, 1729
BspMI	ACCTGC	1 cut(s)	1688
BspPI	GGATC	1 cut(s)	1313
BspT107I	GGYRCC	2 cut(s)	179, 1700
BsrBI	CCGCTC	1 cut(s)	12
BsrDI	GCAATG	2 cut(s)	30, 440
BsrFI	RCCGGY	3 cut(s)	224, 331, 1541
BsrI	ACTGG	2 cut(s)	504, 598
BssAI	RCCGGY	3 cut(s)	224, 331, 1541
BssECI	CCNNGG	7 cut(s)	66, 354, 531, 779, 903, 940, 1624
BssMI	GATC	2 cut(s)	83, 1318
BssSI	CACGAG	1 cut(s)	1065
BssT1I	CCWWGG	2 cut(s)	903, 1624
Bst2BI	CACGAG	1 cut(s)	1065
Bst2UI	CCWGG	6 cut(s)	532, 822, 884, 942, 1238, 1575
Bst4CI	ACNGT	5 cut(s)	393, 411, 1107, 1465, 1679
Bst6I	CTCTTC	1 cut(s)	1281
BstAPI	GCANNNNNTGC	1 cut(s)	341
BstC8I	GCNNGC	7 cut(s)	333, 528, 575, 726, 1691, 1695, 1714
BstDEI	CTNAG	5 cut(s)	8, 297, 810, 1191, 1424
BstDSI	CCRYGG	1 cut(s)	354
BstF5I	GGATG	5 cut(s)	811, 922, 1165, 1595, 1672
BstFNI	CGCG	1 cut(s)	894
BstH2I	RGCGCY	1 cut(s)	105
BstHHI	GCGC	2 cut(s)	104, 896
BstKTI	GATC	2 cut(s)	86, 1321
BstMAI	GTCTC	6 cut(s)	60, 398, 460, 553, 627, 1477
BstMBI	GATC	2 cut(s)	83, 1318
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 307, 341, 442, 527, 591, 1709
BstNI	CCWGG	6 cut(s)	532, 822, 884, 942, 1238, 1575
BstSCI	CCNGG	8 cut(s)	530, 589, 820, 882, 940, 1236, 1573, 1590
BstSFI	CTRYAG	1 cut(s)	1640
BstSLI	GKGCMC	2 cut(s)	787, 891
BstUI	CGCG	1 cut(s)	894
BstV1I	GCAGC	4 cut(s)	319, 661, 727, 1397
BstV2I	GAAGAC	1 cut(s)	1673
BsuRI	GGCC	6 cut(s)	44, 168, 785, 882, 1049, 1730
BtgI	CCRYGG	1 cut(s)	354
BtgZI	GCGATG	1 cut(s)	1670
BtsCI	GGATG	5 cut(s)	811, 922, 1165, 1595, 1672
BtsI	GCAGTG	2 cut(s)	231, 970
BtsIMutI	CAGTG	3 cut(s)	231, 497, 970
BveI	ACCTGC	1 cut(s)	1688
Cac8I	GCNNGC	7 cut(s)	333, 528, 575, 726, 1691, 1695, 1714
CaiI	CAGNNNCTG	1 cut(s)	802
CciI	TCATGA	1 cut(s)	1823
CfoI	GCGC	2 cut(s)	104, 896
Cfr10I	RCCGGY	3 cut(s)	224, 331, 1541
Cfr13I	GGNCC	5 cut(s)	227, 783, 784, 818, 1728
CseI	GACGC	1 cut(s)	1760
CsiI	ACCWGGT	1 cut(s)	820
Csp6I	GTAC	3 cut(s)	5, 937, 1675
CviAII	CATG	5 cut(s)	913, 1309, 1532, 1636, 1824
CviQI	GTAC	3 cut(s)	5, 937, 1675
DdeI	CTNAG	5 cut(s)	8, 297, 810, 1191, 1424
DpnI	GATC	2 cut(s)	85, 1320
DpnII	GATC	2 cut(s)	83, 1318
EaeI	YGGCCR	2 cut(s)	42, 1047
Eam1104I	CTCTTC	1 cut(s)	1281
EarI	CTCTTC	1 cut(s)	1281
EciI	GGCGGA	4 cut(s)	139, 211, 420, 466
Ecl136II	GAGCTC	1 cut(s)	585
Eco130I	CCWWGG	2 cut(s)	903, 1624
Eco24I	GRGCYC	3 cut(s)	385, 587, 787
Eco47I	GGWCC	2 cut(s)	227, 818
Eco53kI	GAGCTC	1 cut(s)	585
Eco57I	CTGAAG	1 cut(s)	527
EcoICRI	GAGCTC	1 cut(s)	585
EcoO109I	RGGNCCY	2 cut(s)	783, 818
EcoRII	CCWGG	6 cut(s)	530, 820, 882, 940, 1236, 1573
EcoT14I	CCWWGG	2 cut(s)	903, 1624
EcoT38I	GRGCYC	3 cut(s)	385, 587, 787
ErhI	CCWWGG	2 cut(s)	903, 1624
Esp3I	CGTCTC	1 cut(s)	460
FaeI	CATG	5 cut(s)	916, 1312, 1535, 1639, 1827
FaqI	GGGAC	2 cut(s)	213, 1721
FatI	CATG	5 cut(s)	912, 1308, 1531, 1635, 1823
FauI	CCCGC	1 cut(s)	5
FblI	GTMKAC	2 cut(s)	258, 551
FokI	GGATG	5 cut(s)	818, 929, 1172, 1582, 1679
FriOI	GRGCYC	3 cut(s)	385, 587, 787
FspBI	CTAG	5 cut(s)	492, 992, 1271, 1389, 1724
GlaI	GCGC	2 cut(s)	103, 895
GsaI	CCCAGC	2 cut(s)	525, 790
GsuI	CTGGAG	1 cut(s)	80
HaeII	RGCGCY	1 cut(s)	105
HaeIII	GGCC	6 cut(s)	44, 168, 785, 882, 1049, 1730
HapII	CCGG	7 cut(s)	165, 225, 332, 590, 1542, 1591, 1664
HgaI	GACGC	1 cut(s)	1760
HhaI	GCGC	2 cut(s)	104, 896
Hin1II	CATG	5 cut(s)	916, 1312, 1535, 1639, 1827
Hin6I	GCGC	2 cut(s)	102, 894
HinP1I	GCGC	2 cut(s)	102, 894
HincII	GTYRAC	1 cut(s)	840
HindII	GTYRAC	1 cut(s)	840
HindIII	AAGCTT	1 cut(s)	1691
HinfI	GANTC	8 cut(s)	91, 248, 374, 548, 561, 713, 1491, 1508
HpaI	GTTAAC	1 cut(s)	840
HpaII	CCGG	7 cut(s)	165, 225, 332, 590, 1542, 1591, 1664
HphI	GGTGA	8 cut(s)	163, 579, 892, 1463, 1597, 1645, 1796, 1808
Hpy166II	GTNNAC	4 cut(s)	259, 552, 840, 889
Hpy188I	TCNGA	4 cut(s)	90, 1126, 1371, 1513
Hpy8I	GTNNAC	4 cut(s)	259, 552, 840, 889
Hpy99I	CGWCG	2 cut(s)	146, 257
HpyAV	CCTTC	5 cut(s)	19, 216, 486, 1036, 1784
HpyCH4III	ACNGT	5 cut(s)	393, 411, 1107, 1465, 1679
HpyCH4IV	ACGT	2 cut(s)	978, 1761
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 307, 341, 442, 527, 591, 1709
HpyF3I	CTNAG	5 cut(s)	8, 297, 810, 1191, 1424
HpySE526I	ACGT	2 cut(s)	978, 1761
Hsp92II	CATG	5 cut(s)	916, 1312, 1535, 1639, 1827
HspAI	GCGC	2 cut(s)	102, 894
KroI	GCCGGC	1 cut(s)	331
KroNI	GCCGGC	1 cut(s)	333
KspAI	GTTAAC	1 cut(s)	840
Kzo9I	GATC	2 cut(s)	83, 1318
LmnI	GCTCC	5 cut(s)	208, 518, 671, 733, 1382
Lsp1109I	GCAGC	4 cut(s)	319, 661, 727, 1397
LweI	GCATC	5 cut(s)	765, 796, 1117, 1604, 1725
MabI	ACCWGGT	1 cut(s)	820
MaeI	CTAG	5 cut(s)	492, 992, 1271, 1389, 1724
MaeII	ACGT	2 cut(s)	978, 1761
MaeIII	GTNAC	5 cut(s)	898, 965, 1247, 1451, 1784
MalI	GATC	2 cut(s)	85, 1320
MbiI	CCGCTC	1 cut(s)	12
MboI	GATC	2 cut(s)	83, 1318
MboII	GAAGA	6 cut(s)	326, 980, 1067, 1272, 1298, 1673
MhlI	GDGCHC	6 cut(s)	372, 385, 499, 587, 787, 891
MlsI	TGGCCA	2 cut(s)	44, 1049
MluNI	TGGCCA	2 cut(s)	44, 1049
MlyI	GAGTC	3 cut(s)	85, 555, 557
MmeI	TCCRAC	3 cut(s)	113, 222, 1237
Mox20I	TGGCCA	2 cut(s)	44, 1049
MroNI	GCCGGC	1 cut(s)	331
MscI	TGGCCA	2 cut(s)	44, 1049
MseI	TTAA	4 cut(s)	839, 927, 981, 1184
MslI	CAYNNNNRTG	1 cut(s)	1472
Msp20I	TGGCCA	2 cut(s)	44, 1049
MspI	CCGG	7 cut(s)	165, 225, 332, 590, 1542, 1591, 1664
MspR9I	CCNGG	8 cut(s)	532, 591, 822, 884, 942, 1238, 1575, 1592
Mva1269I	GAATGC	3 cut(s)	637, 669, 1076
MvaI	CCWGG	6 cut(s)	532, 822, 884, 942, 1238, 1575
MvnI	CGCG	1 cut(s)	894
MwoI	GCNNNNNNNGC	7 cut(s)	41, 307, 341, 442, 527, 591, 1709
NaeI	GCCGGC	1 cut(s)	333
NciI	CCSGG	2 cut(s)	591, 1592
NdeII	GATC	2 cut(s)	83, 1318
NgoMIV	GCCGGC	1 cut(s)	331
NlaIII	CATG	5 cut(s)	916, 1312, 1535, 1639, 1827
NlaIV	GGNNCC	5 cut(s)	181, 229, 785, 1702, 1729
NmeAIII	GCCGAG	2 cut(s)	91, 804
NmuCI	GTSAC	4 cut(s)	898, 965, 1451, 1784
PagI	TCATGA	1 cut(s)	1823
PaqCI	CACCTGC	1 cut(s)	1688
PctI	GAATGC	3 cut(s)	637, 669, 1076
PdiI	GCCGGC	1 cut(s)	333
PfeI	GAWTC	5 cut(s)	248, 374, 713, 1491, 1508
PflFI	GACNNNGTC	1 cut(s)	409
PleI	GAGTC	3 cut(s)	85, 555, 556
PpsI	GAGTC	3 cut(s)	85, 555, 556
PpuMI	RGGWCCY	1 cut(s)	818
Psp124BI	GAGCTC	1 cut(s)	587
Psp1406I	AACGTT	1 cut(s)	978
Psp5II	RGGWCCY	1 cut(s)	818
Psp6I	CCWGG	6 cut(s)	530, 820, 882, 940, 1236, 1573
PspFI	CCCAGC	2 cut(s)	521, 786
PspGI	CCWGG	6 cut(s)	530, 820, 882, 940, 1236, 1573
PspN4I	GGNNCC	5 cut(s)	181, 229, 785, 1702, 1729
PspOMI	GGGCCC	1 cut(s)	783
PspPI	GGNCC	5 cut(s)	227, 783, 784, 818, 1728
PspPPI	RGGWCCY	1 cut(s)	818
PstNI	CAGNNNCTG	1 cut(s)	802
PsyI	GACNNNGTC	1 cut(s)	409
RsaI	GTAC	3 cut(s)	6, 938, 1676
RsaNI	GTAC	3 cut(s)	5, 937, 1675
RseI	CAYNNNNRTG	1 cut(s)	1472
SacI	GAGCTC	1 cut(s)	587
SaqAI	TTAA	4 cut(s)	839, 927, 981, 1184
Sau3AI	GATC	2 cut(s)	83, 1318
Sau96I	GGNCC	5 cut(s)	227, 783, 784, 818, 1728
SchI	GAGTC	3 cut(s)	85, 555, 557
ScrFI	CCNGG	8 cut(s)	532, 591, 822, 884, 942, 1238, 1575, 1592
SduI	GDGCHC	6 cut(s)	372, 385, 499, 587, 787, 891
SexAI	ACCWGGT	1 cut(s)	820
SfaNI	GCATC	5 cut(s)	765, 796, 1117, 1604, 1725
SfcI	CTRYAG	1 cut(s)	1640
SinI	GGWCC	2 cut(s)	227, 818
SmiMI	CAYNNNNRTG	1 cut(s)	1472
SspI	AATATT	1 cut(s)	1803
SspMI	CTAG	5 cut(s)	492, 992, 1271, 1389, 1724
SstI	GAGCTC	1 cut(s)	587
StyD4I	CCNGG	8 cut(s)	530, 589, 820, 882, 940, 1236, 1573, 1590
StyI	CCWWGG	2 cut(s)	903, 1624
TaaI	ACNGT	5 cut(s)	393, 411, 1107, 1465, 1679
TaiI	ACGT	2 cut(s)	981, 1764
TaqI	TCGA	8 cut(s)	372, 377, 661, 747, 849, 972, 1470, 1808
TauI	GCSGC	8 cut(s)	304, 307, 328, 331, 347, 436, 439, 580
TfiI	GAWTC	5 cut(s)	248, 374, 713, 1491, 1508
Tru1I	TTAA	4 cut(s)	839, 927, 981, 1184
Tru9I	TTAA	4 cut(s)	839, 927, 981, 1184
TscAI	CASTG	3 cut(s)	238, 504, 970
TseFI	GTSAC	4 cut(s)	898, 965, 1451, 1784
TseI	GCWGC	4 cut(s)	307, 674, 740, 1385
Tsp45I	GTSAC	4 cut(s)	898, 965, 1451, 1784
TspDTI	ATGAA	6 cut(s)	870, 1055, 1095, 1297, 1673, 1812
TspGWI	ACGGA	4 cut(s)	241, 343, 603, 1137
TspRI	CASTG	3 cut(s)	238, 504, 970
Tth111I	GACNNNGTC	1 cut(s)	409
VneI	GTGCAC	1 cut(s)	887
VpaK11BI	GGWCC	2 cut(s)	227, 818
XapI	RAATTY	2 cut(s)	71, 930
XbaI	TCTAGA	2 cut(s)	491, 991
XcmI	CCANNNNNNNNNTGG	1 cut(s)	910
XmiI	GTMKAC	2 cut(s)	258, 551
XspI	CTAG	5 cut(s)	492, 992, 1271, 1389, 1724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.