AT3G04340

Peptidase family M41

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
1146568 .. 1153650
7083 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G04340.1

Sequence Viewer

Length: 3963 bp
ATGGATTTCATTTCCGCTTCTTCCTTATCTTCACCCTTTTCCACACAGTTGTCTCCGATTTATTTGAGCTCAGGTATAGTATCGTTAAAGCCTAGACATCGAGTCAAAAATCGAAACTTTGGGTCTAGAGAATCCAATAATAAATCTAGGAAAATTGTGCCCATTAGAGGCTGCTTTGGTTTTTCCGGGAGTTTTTTGAGGTCGAAACAGTCTGATTACGGTAGTGAAGCTGTTTCGGAATCATTGAGATTATGTGGAGAGGGAAATGAGCTTGTGCTATCTTCCGAGTATAATAGCGCAAAGACGAGAGAGAGCGTAATACAGTTTGTTACCAAGCCTCTAGTTTACGCCTTGTTTTGTATTGCAATTGGACTTTCTCCGATTCGCTCTTTTCAAGCTCCAGCTTTAGCTGTGCCTTTCGTCAGTGATGTTATTTGGAAGAAAAAGAAAGAGAGAGTGAGAGAGAAAGAGGTGGTTTTGAAAGCAGTTGATCATGAGTTCTCGGATTATACTCGGAGATTGTTGGAGACAGTCTCGGTTTTACTGAAGACTATTGAGATAGTTAGAAAGGAAAATGGAGAGGTTGCTGAAGTGGGAGCGGCTTTGGATGCAGTTAAGGTGGAGAAGGAGAAACTGCAGAAGGAGATAATGAGTGGGTTATATCGTGATATGAGGCGGTTGAGGAAGGAGAGAGATTTGTTAATGAAACGAGCTGATAAAATTGTAGATGAGGCCCTAAGTTTGAAGAAACAGAGTGAAAAACTGTTGAGAAAAGGTGCTAGGGAGAAAATGGAGAAACTGGAAGAGAGTGTGGATATTATGGAGAGCGAGTACAATAAGATATGGGAAAGAATAGATGAGATTGATGATATCATTTTAAAGAAAGAGACAACAACATTGAGTTTTGGGGTTAGGGAGCTTATTTTCATTGAAAGAGAGTGTGTAGAGTTGGTTAAGAGCTTCAACCGAGAATTGAATCAAAAAAGTTTTGAAAGTGTTCCTGAAAGCTCCATTACAAAACTCTCGAGGTCTGAGATTAAGCAGGAATTAGTGAACGCTCAAAGAAAGCACTTGGAACAAATGATACTGCCCAATGTTTTGGAACTAGAGGAGGTTGATCCCTTTTTCGATCGTGACTCAGTGGATTTTTCTCTACGCATCAAAAAACGCCTTGAGGAATCAAAAAAGCTGCAGAGAGATCTTCAGAATCGTATCAGAAAACGTATGAAAAAGTTTGGTGAAGAAAAGCTTTTTGTTCAAAAGACTCCAGAAGGTGAAGCTGTCAAGGGATTTCCTGAAGCAGAGGTGAAATGGATGTTTGGAGAGAAAGAGGTGGTTGTTCCGAAAGCTATCCAGCTCCATCTACGCCATGGTTGGAAAAAGTGGCAGGAAGAAGCAAAAGCCGATTTAAAACAGAAACTTTTGGAAGATGTTGATTTTGGCAAACAATATATTGCGCAGAGACAGGAACAAGTTCTCCTGGATCGAGATAGAGTTGTTTCGAAGACTTGGTATAACGAAGACAAAAGTAGGTGGGAGATGGACCCTATGGCTGTTCCCTACGCAGTTTCCAGGAAGCTGATTGACAGTGCCAGGATTAGGCATGATTATGCTGTAATGTATGTTGCATTAAAAGGAGATGACAAGGAGTTTTACGTTGATATCAAGGAATATGAGATGCTATTTGAGAAATTTGGAGGGTTTGATGCTCTGTACCTCAAAATGCTTGCTTGTGGAATCCCAACTTCTGTTCATCTGATGTGGATACCCATGTCAGAGCTAAGTCTTCAACAACAGTTTCTGTTGGTTACAAGGGTGGTTTCTCGAGTCTTTAACGCATTGAGGAAGACTCAAGTTGTATCAAATGCGAAGGATACAGTATTAGAGAAAATAAGGAATATAAACGATGACATTATGATGGCGGTTGTGTTTCCAGTTATCGAATTTATCATTCCTTACCAGTTAAGGCTGCGTCTGGGAATGGCTTGGCCAGAAGAAATAGAACAGACTGTTGGCTCAACATGGTACTTACAATGGCAGTCTGAAGCAGAAATGAATTTCAAGTCCCGCAATACAGAAGATTTTCAGTGGTTCCTCTGGTTTCTAATTCGAAGTTCTATATACGGGTTTGTTTTGTATCACGTTTTCCGCTTTCTAAAAAGAAAGGTTCCAAGACTTCTTGGCTATGGACCCTTCCGCCGAGATCCCAACGTACGGAAATTCTGGAGAGTGAAATCATATTTCACTTATAGAAAAAGGAGAATCAAACAAAAGAGAAAGGCTGGAATCGACCCCATAAAAACTGCATTCGACAGAATGAAGAGAGTGAAAAATCCACCTATCCCATTAAAGAACTTTGCTAGTATTGAGTCTATGAGAGAAGAAATCAACGAGGTTGTGGCATTTTTACAGAATCCAAAGGCATTTCAGGAGATGGGAGCCCGCGCACCTCGGGGCGTTCTTATTGTGGGTGAGAGAGGAACGGGAAAGACGTCACTGGCGCTCGCTATAGCAGCCGAAGCAAGAGTGCCTGTTGTCAATGTTGAAGCTCAAGAGTTGGAAGCTGGGCTATGGGTTGGTCAAAGTGCAGCGAATGTCAGGGAACTCTTTCAAACTGCAAGAGACTTGGCACCTGTAATCATTTTTGTGGAGGATTTTGACCTCTTTGCTGGTGTACGCGGGAAGTTTGTACATACAAAACAGCAAGATCATGAATCGTTCATTAATCAGCTTCTTGTTGAACTTGATGGCTTTGAGAAACAGGATGGCGTAGTTTTGATGGCGACGACACGAAATCATAAGCAAATTGATGAGGCGCTAAGAAGGCCAGGTCGTATGGATAGAGTATTCCATCTTCAAAGTCCAACTGAAATGGAAAGGGAGAGGATTTTACACAACGCTGCAGAAGAAACCATGGACCGAGAACTCGTTGATCTAGTGGATTGGCGTAAGGTTTCAGAGAAGACAACTTTATTAAGACCGATAGAACTGAAACTTGTTCCAATGGCTCTCGAAAGTAGTGCCTTCAGAAGCAAATTTCTGGACACTGACGAACTTCTGAGTTACGTTAGCTGGTTTGCGACGTTTAGCCATATAGTGCCCCCATGGCTGCGAAAAACTAAAGTTGCAAAGACAATGGGCAAAATGCTTGTGAATCATCTTGGACTTAACTTAACCAAAGATGATTTGGAGAATGTGGTTGATCTGATGGAACCATATGGACAAATAAGTAATGGAATAGAACTTTTGAATCCTACTGTTGATTGGACGAGGGAGACAAAGTTCCCACATGCTGTCTGGGCGGCTGGTCGTGCTCTCATCACACTTCTAATACCAAACTTTGATGTTGTGGAAAATCTTTGGCTTGAGCCTAGTTCCTGGGAAGGAATTGGGTGTACAAAAATCACCAAGGTCACAAGTGGAGGCTCCGCGATTGGGAACACGGAATCAAGATCATATCTTGAAAAGAAGCTCGTTTTCTGCTTTGGATCTCACATTGCATCCCAAATGCTTCTTCCTCCCGGAGATGAAAATTTTCTTTCTTCTTCAGAAATAACTAAAGCGCAGGAGATTGCAACACGTATGGTGCTTCAATATGGCTGGGGACCCGATGACAGTCCTGCAGTATACTATGCTACTAACGCGGTTTCAGCTTTGAGTATGGGGAACAATCACGAATATGAAATGGCGGGTAAAGTTGAAAAGATTTATGACTTAGCGTACGAAAAGGCAAAGGGAATGCTCCTTAAAAATCGACGTGTCCTTGAGAAAATCACAGAGGAGCTACTCGAATTTGAGATTTTAACTCATAAGGATTTGGAAAGAATTGTTCATGAGAATGGTGGGATTCGGGAGAAGGAACCTTTCTTTCTATCAGGAACCAATTACAATGAGGCATTGTCAAGGAGTTTTCTTGATGTTGGAGATCCGCCAGAAACTGCACTTCTTAGTGCACCAACCTAA

Protein Analysis

1320

Amino Acids

152.26

Weight (kDa)

8.8

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 820 - 952 1.9e-30 ATPase family associated with various cellular activities (AAA)
Peptidase_M41 PF01434 1102 - 1276 1.8e-10 Peptidase family M41
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011329)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2495
Acc16I TGCGCA 1 cut(s) 1458
AccB1I GGYRCC 1 cut(s) 2629
AccBSI CCGCTC 1 cut(s) 599
AccI GTMKAC 1 cut(s) 3627
AccII CGCG 4 cut(s) 2445, 2679, 3431, 3644
AclWI GGATC 5 cut(s) 1112, 1491, 2198, 3496, 3920
AcoI YGGCCR 1 cut(s) 1988
AcsI RAATTY 7 cut(s) 1691, 1943, 2056, 2219, 3035, 3532, 3791
AcuI CTGAAG 7 cut(s) 566, 609, 1187, 1317, 2064, 3010, 3531
AcyI GRCGYC 1 cut(s) 2492
AfaI GTAC 8 cut(s) 833, 1715, 2027, 2214, 2676, 2691, 3397, 3722
AfiI CCNNNNNNNGG 4 cut(s) 167, 1599, 2214, 3435
AflIII ACRYGT 2 cut(s) 3578, 3757
AhdI GACNNNNNGTC 1 cut(s) 101
AjiI CACGTC 1 cut(s) 3758
AjnI CCWGG 5 cut(s) 1479, 1571, 1592, 2827, 3377
AjuI GAANNNNNNNTTGG 4 cut(s) 1995, 2027, 3498, 3530
AloI GAACNNNNNNTCC 4 cut(s) 1461, 1493, 3266, 3298
Alw21I GWGCWC 3 cut(s) 71, 3316, 3955
Alw26I GTCTC 7 cut(s) 57, 521, 538, 881, 1456, 2616, 3269
Alw44I GTGCAC 1 cut(s) 3951
AlwI GGATC 5 cut(s) 1112, 1491, 2198, 3496, 3920
AlwNI CAGNNNCTG 2 cut(s) 1801, 3938
Ama87I CYCGRG 3 cut(s) 1024, 1824, 2451
AoxI GGCC 3 cut(s) 732, 1988, 2825
ApaLI GTGCAC 1 cut(s) 3951
ApeKI GCWGC 7 cut(s) 171, 1189, 1969, 2513, 2588, 2900, 3109
ApoI RAATTY 7 cut(s) 1691, 1943, 2056, 2219, 3035, 3532, 3791
AseI ATTAAT 1 cut(s) 2724
Asp700I GAANNNNTTC 5 cut(s) 996, 1473, 2082, 2607, 3534
AspLEI GCGC 6 cut(s) 299, 1459, 2447, 2503, 2818, 3565
AspS9I GGNCC 5 cut(s) 733, 1543, 2189, 2917, 3605
AsuC2I CCSGG 2 cut(s) 187, 3522
AsuHPI GGTGA 6 cut(s) 24, 1250, 1286, 1318, 2483, 3397
AsuII TTCGAA 2 cut(s) 1502, 2110
AvaI CYCGRG 3 cut(s) 1024, 1824, 2451
AvaII GGWCC 4 cut(s) 1543, 2189, 2917, 3605
BaeGI GKGCMC 3 cut(s) 162, 3102, 3955
BaeI ACNNNNGTAYC 2 cut(s) 1757, 1790
BalI TGGCCA 1 cut(s) 1990
BanI GGYRCC 1 cut(s) 2629
BanII GRGCYC 2 cut(s) 71, 2443
BarI GAAGNNNNNNTAC 2 cut(s) 2838, 2870
BbsI GAAGAC 6 cut(s) 554, 1511, 1527, 1778, 1853, 2969
Bbv12I GWGCWC 3 cut(s) 71, 3316, 3955
BbvI GCAGC 7 cut(s) 158, 1176, 1956, 2525, 2600, 2887, 3096
BccI CCATC 9 cut(s) 1368, 1534, 1912, 2428, 2741, 2759, 2773, 2859, 3202
BcgI CGANNNNNNTGC 2 cut(s) 3002, 3036
BciT130I CCWGG 5 cut(s) 1481, 1573, 1594, 2829, 3379
BciVI GTATCC 2 cut(s) 1758, 1867
BclI TGATCA 1 cut(s) 490
BcnI CCSGG 2 cut(s) 187, 3522
BcoDI GTCTC 7 cut(s) 57, 521, 538, 881, 1456, 2616, 3269
BfaI CTAG 9 cut(s) 93, 126, 147, 341, 780, 1106, 2361, 2936, 3372
BfmI CTRYAG 5 cut(s) 635, 1190, 2508, 2901, 3621
BfoI RGCGCY 2 cut(s) 2504, 2819
BfuI GTATCC 2 cut(s) 1758, 1867
BglI GCCNNNNNGGC 1 cut(s) 3106
BglII AGATCT 1 cut(s) 1198
BisI GCNGC 9 cut(s) 172, 600, 1190, 1970, 2514, 2589, 2901, 3110, 3303
BlsI GCNGC 9 cut(s) 173, 601, 1191, 1971, 2515, 2590, 2902, 3111, 3304
Bme1390I CCNGG 7 cut(s) 187, 1481, 1573, 1594, 2829, 3379, 3522
Bme18I GGWCC 4 cut(s) 1543, 2189, 2917, 3605
BmeRI GACNNNNNGTC 1 cut(s) 101
BmeT110I CYCGRG 3 cut(s) 1024, 1824, 2451
BmgBI CACGTC 1 cut(s) 3758
BmgT120I GGNCC 5 cut(s) 733, 1543, 2189, 2917, 3605
BmrFI CCNGG 7 cut(s) 187, 1481, 1573, 1594, 2829, 3379, 3522
BmsI GCATC 5 cut(s) 598, 1167, 1668, 1696, 3509
BpiI GAAGAC 6 cut(s) 554, 1511, 1527, 1778, 1853, 2969
BplI GAGNNNNNCTC 4 cut(s) 518, 550, 1834, 1866
BpmI CTGGAG 3 cut(s) 384, 1251, 2245
Bpu10I CCTNAGC 1 cut(s) 70
Bpu14I TTCGAA 2 cut(s) 1502, 2110
BpuEI CTTGAG 5 cut(s) 1193, 1836, 2535, 3386, 3785
BpuMI CCSGG 2 cut(s) 187, 3522
BsaAI YACGTR 1 cut(s) 3581
BsaHI GRCGYC 1 cut(s) 2492
BsaJI CCNNGG 6 cut(s) 1369, 2450, 2913, 3104, 3378, 3408
BsaXI ACNNNNNCTCC 6 cut(s) 815, 845, 1461, 1491, 3266, 3296
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 1599, 2214, 3435
Bse1I ACTGG 4 cut(s) 804, 1934, 1960, 2502
Bse3DI GCAATG 1 cut(s) 3495
BseBI CCWGG 5 cut(s) 1481, 1573, 1594, 2829, 3379
BseDI CCNNGG 6 cut(s) 1369, 2450, 2913, 3104, 3378, 3408
BseGI GGATG 4 cut(s) 613, 1320, 2770, 3500
BseLI CCNNNNNNNGG 4 cut(s) 167, 1599, 2214, 3435
BseMI GCAATG 1 cut(s) 3495
BseMII CTCAG 4 cut(s) 84, 1023, 1152, 3050
BseNI ACTGG 4 cut(s) 804, 1934, 1960, 2502
BseRI GAGGAG 2 cut(s) 1124, 3794
BseSI GKGCMC 3 cut(s) 162, 3102, 3955
BseXI GCAGC 7 cut(s) 158, 1176, 1956, 2525, 2600, 2887, 3096
BseYI CCCAGC 2 cut(s) 2564, 3600
BsgI GTGCAG 2 cut(s) 2607, 3924
Bsh1236I CGCG 4 cut(s) 2445, 2679, 3431, 3644
Bsh1285I CGRYCG 1 cut(s) 1132
BshFI GGCC 3 cut(s) 734, 1990, 2827
BshNI GGYRCC 1 cut(s) 2629
BsiEI CGRYCG 1 cut(s) 1132
BsiHKAI GWGCWC 3 cut(s) 71, 3316, 3955
BsiHKCI CYCGRG 3 cut(s) 1024, 1824, 2451
BsiSI CCGG 2 cut(s) 186, 3522
BsiWI CGTACG 2 cut(s) 2212, 3720
BslFI GGGAC 2 cut(s) 2050, 3618
BslI CCNNNNNNNGG 4 cut(s) 167, 1599, 2214, 3435
BsmAI GTCTC 7 cut(s) 57, 521, 538, 881, 1456, 2616, 3269
BsmFI GGGAC 2 cut(s) 2050, 3618
BsmI GAATGC 2 cut(s) 2306, 3744
BsnI GGCC 3 cut(s) 734, 1990, 2827
BsoBI CYCGRG 3 cut(s) 1024, 1824, 2451
Bsp119I TTCGAA 2 cut(s) 1502, 2110
Bsp1286I GDGCHC 6 cut(s) 71, 162, 2443, 3102, 3316, 3955
Bsp1407I TGTACA 2 cut(s) 2689, 3395
Bsp19I CCATGG 3 cut(s) 1369, 2913, 3104
BspANI GGCC 3 cut(s) 734, 1990, 2827
BspCNI CTCAG 4 cut(s) 83, 1024, 1151, 3051
BspFNI CGCG 4 cut(s) 2445, 2679, 3431, 3644
BspHI TCATGA 3 cut(s) 493, 2710, 3832
BspMAI CTGCAG 4 cut(s) 639, 1194, 2905, 3625
BspPI GGATC 5 cut(s) 1112, 1491, 2198, 3496, 3920
BspT104I TTCGAA 2 cut(s) 1502, 2110
BspT107I GGYRCC 1 cut(s) 2629
BsrBI CCGCTC 1 cut(s) 599
BsrDI GCAATG 1 cut(s) 3495
BsrGI TGTACA 2 cut(s) 2689, 3395
BsrI ACTGG 4 cut(s) 804, 1934, 1960, 2502
BssECI CCNNGG 6 cut(s) 1369, 2450, 2913, 3104, 3378, 3408
BssNAI GTATAC 1 cut(s) 3628
BssNI GRCGYC 1 cut(s) 2492
BssT1I CCWWGG 4 cut(s) 1369, 2913, 3104, 3408
Bst1107I GTATAC 1 cut(s) 3628
Bst2UI CCWGG 5 cut(s) 1481, 1573, 1594, 2829, 3379
Bst6I CTCTTC 2 cut(s) 798, 2315
BstACI GRCGYC 1 cut(s) 2492
BstAUI TGTACA 2 cut(s) 2689, 3395
BstBAI YACGTR 1 cut(s) 3581
BstBI TTCGAA 2 cut(s) 1502, 2110
BstC8I GCNNGC 3 cut(s) 1728, 2443, 2505
BstDEI CTNAG 9 cut(s) 70, 737, 1032, 1138, 1781, 2819, 3059, 3715, 3947
BstDSI CCRYGG 3 cut(s) 1369, 2913, 3104
BstF5I GGATG 4 cut(s) 613, 1320, 2770, 3500
BstFNI CGCG 4 cut(s) 2445, 2679, 3431, 3644
BstH2I RGCGCY 2 cut(s) 2504, 2819
BstHHI GCGC 6 cut(s) 299, 1459, 2447, 2503, 2818, 3565
BstMAI GTCTC 7 cut(s) 57, 521, 538, 881, 1456, 2616, 3269
BstMCI CGRYCG 1 cut(s) 1132
BstMWI GCNNNNNNNGC 9 cut(s) 608, 2513, 2519, 2824, 3106, 3299, 3311, 3641, 3650
BstNI CCWGG 5 cut(s) 1481, 1573, 1594, 2829, 3379
BstNSI RCATGY 1 cut(s) 3293
BstSCI CCNGG 7 cut(s) 185, 1479, 1571, 1592, 2827, 3377, 3520
BstSFI CTRYAG 5 cut(s) 635, 1190, 2508, 2901, 3621
BstSLI GKGCMC 3 cut(s) 162, 3102, 3955
BstUI CGCG 4 cut(s) 2445, 2679, 3431, 3644
BstV1I GCAGC 7 cut(s) 158, 1176, 1956, 2525, 2600, 2887, 3096
BstV2I GAAGAC 6 cut(s) 554, 1511, 1527, 1778, 1853, 2969
BstX2I RGATCY 4 cut(s) 1198, 2203, 3488, 3925
BstXI CCANNNNNNTGG 1 cut(s) 1099
BstYI RGATCY 4 cut(s) 1198, 2203, 3488, 3925
BstZ17I GTATAC 1 cut(s) 3628
BsuI GTATCC 2 cut(s) 1758, 1867
BsuRI GGCC 3 cut(s) 734, 1990, 2827
BtgI CCRYGG 3 cut(s) 1369, 2913, 3104
BtrI CACGTC 1 cut(s) 3758
BtsCI GGATG 4 cut(s) 613, 1320, 2770, 3500
BtsIMutI CAGTG 6 cut(s) 430, 1146, 1594, 2093, 2495, 3045
Cac8I GCNNGC 3 cut(s) 1728, 2443, 2505
CaiI CAGNNNCTG 2 cut(s) 1801, 3938
CciI TCATGA 3 cut(s) 493, 2710, 3832
CfoI GCGC 6 cut(s) 299, 1459, 2447, 2503, 2818, 3565
Cfr13I GGNCC 5 cut(s) 733, 1543, 2189, 2917, 3605
CseI GACGC 1 cut(s) 1961
Csp6I GTAC 8 cut(s) 832, 1714, 2026, 2213, 2675, 2690, 3396, 3721
CviQI GTAC 8 cut(s) 832, 1714, 2026, 2213, 2675, 2690, 3396, 3721
DdeI CTNAG 9 cut(s) 70, 737, 1032, 1138, 1781, 2819, 3059, 3715, 3947
DraI TTTAAA 2 cut(s) 879, 1410
DriI GACNNNNNGTC 1 cut(s) 101
EaeI YGGCCR 1 cut(s) 1988
Eam1104I CTCTTC 2 cut(s) 798, 2315
Eam1105I GACNNNNNGTC 1 cut(s) 101
EarI CTCTTC 2 cut(s) 798, 2315
EciI GGCGGA 2 cut(s) 2186, 3918
Ecl136II GAGCTC 1 cut(s) 69
Eco130I CCWWGG 4 cut(s) 1369, 2913, 3104, 3408
Eco24I GRGCYC 2 cut(s) 71, 2443
Eco32I GATATC 2 cut(s) 871, 1663
Eco47I GGWCC 4 cut(s) 1543, 2189, 2917, 3605
Eco53kI GAGCTC 1 cut(s) 69
Eco57I CTGAAG 7 cut(s) 566, 609, 1187, 1317, 2064, 3010, 3531
Eco88I CYCGRG 3 cut(s) 1024, 1824, 2451
EcoICRI GAGCTC 1 cut(s) 69
EcoO109I RGGNCCY 2 cut(s) 733, 3605
EcoRII CCWGG 5 cut(s) 1479, 1571, 1592, 2827, 3377
EcoRV GATATC 2 cut(s) 871, 1663
EcoT14I CCWWGG 4 cut(s) 1369, 2913, 3104, 3408
EcoT38I GRGCYC 2 cut(s) 71, 2443
ErhI CCWWGG 4 cut(s) 1369, 2913, 3104, 3408
FalI AAGNNNNNCTT 2 cut(s) 1233, 1265
FaqI GGGAC 2 cut(s) 2050, 3618
FauI CCCGC 4 cut(s) 2075, 2450, 2672, 3682
FauNDI CATATG 1 cut(s) 3217
FbaI TGATCA 1 cut(s) 490
FblI GTMKAC 1 cut(s) 3627
Fnu4HI GCNGC 9 cut(s) 172, 600, 1190, 1970, 2514, 2589, 2901, 3110, 3303
FokI GGATG 4 cut(s) 620, 1327, 2777, 3487
FriOI GRGCYC 2 cut(s) 71, 2443
Fsp4HI GCNGC 9 cut(s) 172, 600, 1190, 1970, 2514, 2589, 2901, 3110, 3303
FspBI CTAG 9 cut(s) 93, 126, 147, 341, 780, 1106, 2361, 2936, 3372
FspI TGCGCA 1 cut(s) 1458
GlaI GCGC 6 cut(s) 298, 1458, 2446, 2502, 2817, 3564
GluI GCNGC 9 cut(s) 172, 600, 1190, 1970, 2514, 2589, 2901, 3110, 3303
GsaI CCCAGC 2 cut(s) 2568, 3604
GsuI CTGGAG 3 cut(s) 384, 1251, 2245
HaeII RGCGCY 2 cut(s) 2504, 2819
HaeIII GGCC 3 cut(s) 734, 1990, 2827
HapII CCGG 2 cut(s) 186, 3522
HgaI GACGC 1 cut(s) 1961
HhaI GCGC 6 cut(s) 299, 1459, 2447, 2503, 2818, 3565
Hin1I GRCGYC 1 cut(s) 2492
Hin6I GCGC 6 cut(s) 297, 1457, 2445, 2501, 2816, 3563
HinP1I GCGC 6 cut(s) 297, 1457, 2445, 2501, 2816, 3563
HindIII AAGCTT 1 cut(s) 1247
HpaII CCGG 2 cut(s) 186, 3522
HphI GGTGA 6 cut(s) 24, 1250, 1286, 1318, 2483, 3397
Hpy166II GTNNAC 6 cut(s) 346, 1054, 2675, 3396, 3628, 3953
Hpy8I GTNNAC 6 cut(s) 346, 1054, 2675, 3396, 3628, 3953
Hpy99I CGWCG 3 cut(s) 2788, 3085, 3759
HpyCH4IV ACGT 9 cut(s) 1222, 1656, 2142, 2211, 2492, 3066, 3083, 3580, 3757
HpyF10VI GCNNNNNNNGC 9 cut(s) 608, 2513, 2519, 2824, 3106, 3299, 3311, 3641, 3650
HpyF3I CTNAG 9 cut(s) 70, 737, 1032, 1138, 1781, 2819, 3059, 3715, 3947
HpySE526I ACGT 9 cut(s) 1222, 1656, 2142, 2211, 2492, 3066, 3083, 3580, 3757
Hsp92I GRCGYC 1 cut(s) 2492
HspAI GCGC 6 cut(s) 297, 1457, 2445, 2501, 2816, 3563
KflI GGGWCCC 1 cut(s) 3605
Ksp22I TGATCA 1 cut(s) 490
LmnI GCTCC 9 cut(s) 403, 596, 916, 1013, 1362, 2438, 3431, 3747, 3781
Lsp1109I GCAGC 7 cut(s) 158, 1176, 1956, 2525, 2600, 2887, 3096
LweI GCATC 5 cut(s) 598, 1167, 1668, 1696, 3509
MaeI CTAG 9 cut(s) 93, 126, 147, 341, 780, 1106, 2361, 2936, 3372
MaeII ACGT 9 cut(s) 1222, 1656, 2142, 2211, 2492, 3066, 3083, 3580, 3757
MaeIII GTNAC 6 cut(s) 328, 1133, 1807, 2493, 3062, 3412
MbiI CCGCTC 1 cut(s) 599
MfeI CAATTG 1 cut(s) 366
MflI RGATCY 4 cut(s) 1198, 2203, 3488, 3925
MhlI GDGCHC 6 cut(s) 71, 162, 2443, 3102, 3316, 3955
MlsI TGGCCA 1 cut(s) 1990
MluNI TGGCCA 1 cut(s) 1990
MlyI GAGTC 6 cut(s) 111, 1130, 1258, 1836, 1843, 2378
MmeI TCCRAC 5 cut(s) 504, 1355, 2538, 2888, 3901
Mox20I TGGCCA 1 cut(s) 1990
MroXI GAANNNNTTC 5 cut(s) 996, 1473, 2082, 2607, 3534
MscI TGGCCA 1 cut(s) 1990
MslI CAYNNNNRTG 5 cut(s) 1608, 1916, 2645, 3678, 3837
Msp20I TGGCCA 1 cut(s) 1990
MspI CCGG 2 cut(s) 186, 3522
MspR9I CCNGG 7 cut(s) 187, 1481, 1573, 1594, 2829, 3379, 3522
MunI CAATTG 1 cut(s) 366
Mva1269I GAATGC 2 cut(s) 2306, 3744
MvaI CCWGG 5 cut(s) 1481, 1573, 1594, 2829, 3379
MvnI CGCG 4 cut(s) 2445, 2679, 3431, 3644
MwoI GCNNNNNNNGC 9 cut(s) 608, 2513, 2519, 2824, 3106, 3299, 3311, 3641, 3650
NciI CCSGG 2 cut(s) 187, 3522
NcoI CCATGG 3 cut(s) 1369, 2913, 3104
NdeI CATATG 1 cut(s) 3217
NmeAIII GCCGAG 1 cut(s) 2225
NmuCI GTSAC 3 cut(s) 1133, 2493, 3412
NsbI TGCGCA 1 cut(s) 1458
NspI RCATGY 1 cut(s) 3293
NspV TTCGAA 2 cut(s) 1502, 2110
PaeR7I CTCGAG 2 cut(s) 1024, 1824
PagI TCATGA 3 cut(s) 493, 2710, 3832
PcsI WCGNNNNNNNCGW 1 cut(s) 2489
PctI GAATGC 2 cut(s) 2306, 3744
PdmI GAANNNNTTC 5 cut(s) 996, 1473, 2082, 2607, 3534
Pfl23II CGTACG 2 cut(s) 2212, 3720
PfoI TCCNGGA 4 cut(s) 185, 1479, 1571, 3520
PkrI GCNGC 9 cut(s) 173, 601, 1191, 1971, 2515, 2590, 2902, 3111, 3304
Ple19I CGATCG 1 cut(s) 1132
PleI GAGTC 6 cut(s) 110, 1130, 1258, 1835, 1843, 2377
PpsI GAGTC 6 cut(s) 110, 1130, 1258, 1835, 1843, 2377
Ppu21I YACGTR 1 cut(s) 3581
PpuMI RGGWCCY 1 cut(s) 3605
PshBI ATTAAT 1 cut(s) 2724
Psp124BI GAGCTC 1 cut(s) 71
Psp5II RGGWCCY 1 cut(s) 3605
Psp6I CCWGG 5 cut(s) 1479, 1571, 1592, 2827, 3377
PspFI CCCAGC 2 cut(s) 2564, 3600
PspGI CCWGG 5 cut(s) 1479, 1571, 1592, 2827, 3377
PspLI CGTACG 2 cut(s) 2212, 3720
PspPI GGNCC 5 cut(s) 733, 1543, 2189, 2917, 3605
PspPPI RGGWCCY 1 cut(s) 3605
PsrI GAACNNNNNNTAC 2 cut(s) 1068, 1100
PstI CTGCAG 4 cut(s) 639, 1194, 2905, 3625
PstNI CAGNNNCTG 2 cut(s) 1801, 3938
PsuI RGATCY 4 cut(s) 1198, 2203, 3488, 3925
PvuI CGATCG 1 cut(s) 1132
RsaI GTAC 8 cut(s) 833, 1715, 2027, 2214, 2676, 2691, 3397, 3722
RsaNI GTAC 8 cut(s) 832, 1714, 2026, 2213, 2675, 2690, 3396, 3721
RseI CAYNNNNRTG 5 cut(s) 1608, 1916, 2645, 3678, 3837
SacI GAGCTC 1 cut(s) 71
SatI GCNGC 9 cut(s) 172, 600, 1190, 1970, 2514, 2589, 2901, 3110, 3303
Sau96I GGNCC 5 cut(s) 733, 1543, 2189, 2917, 3605
SchI GAGTC 6 cut(s) 111, 1130, 1258, 1836, 1843, 2378
ScrFI CCNGG 7 cut(s) 187, 1481, 1573, 1594, 2829, 3379, 3522
SduI GDGCHC 6 cut(s) 71, 162, 2443, 3102, 3316, 3955
SfaNI GCATC 5 cut(s) 598, 1167, 1668, 1696, 3509
SfcI CTRYAG 5 cut(s) 635, 1190, 2508, 2901, 3621
Sfr274I CTCGAG 2 cut(s) 1024, 1824
SfuI TTCGAA 2 cut(s) 1502, 2110
SinI GGWCC 4 cut(s) 1543, 2189, 2917, 3605
SlaI CTCGAG 2 cut(s) 1024, 1824
SmiMI CAYNNNNRTG 5 cut(s) 1608, 1916, 2645, 3678, 3837
SmlI CTYRAG 7 cut(s) 1024, 1172, 1824, 1851, 2550, 3365, 3764
SmoI CTYRAG 7 cut(s) 1024, 1172, 1824, 1851, 2550, 3365, 3764
SspMI CTAG 9 cut(s) 93, 126, 147, 341, 780, 1106, 2361, 2936, 3372
SstI GAGCTC 1 cut(s) 71
StyD4I CCNGG 7 cut(s) 185, 1479, 1571, 1592, 2827, 3377, 3520
StyI CCWWGG 4 cut(s) 1369, 2913, 3104, 3408
TaiI ACGT 9 cut(s) 1225, 1659, 2145, 2214, 2495, 3069, 3086, 3583, 3760
TaqII GACCGA 2 cut(s) 2934, 2995
TatI WGTACW 3 cut(s) 831, 2689, 3395
TauI GCSGC 2 cut(s) 602, 3305
TscAI CASTG 6 cut(s) 430, 1146, 1594, 2093, 2502, 3052
TseFI GTSAC 3 cut(s) 1133, 2493, 3412
TseI GCWGC 7 cut(s) 171, 1189, 1969, 2513, 2588, 2900, 3109
Tsp45I GTSAC 3 cut(s) 1133, 2493, 3412
TspGWI ACGGA 2 cut(s) 2230, 3458
TspRI CASTG 6 cut(s) 430, 1146, 1594, 2093, 2502, 3052
VneI GTGCAC 1 cut(s) 3951
VpaK11BI GGWCC 4 cut(s) 1543, 2189, 2917, 3605
VspI ATTAAT 1 cut(s) 2724
XapI RAATTY 7 cut(s) 1691, 1943, 2056, 2219, 3035, 3532, 3791
XbaI TCTAGA 1 cut(s) 125
XceI RCATGY 1 cut(s) 3293
XcmI CCANNNNNNNNNTGG 3 cut(s) 1367, 3184, 3294
XhoI CTCGAG 2 cut(s) 1024, 1824
XmiI GTMKAC 1 cut(s) 3627
XmnI GAANNNNTTC 5 cut(s) 996, 1473, 2082, 2607, 3534
XspI CTAG 9 cut(s) 93, 126, 147, 341, 780, 1106, 2361, 2936, 3372
ZraI GACGTC 1 cut(s) 2493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.