ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04340 |
| fragaria_vesca | FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 |
| malus_domestica | MD04G1232400.v1.1 |
| prunus_persica | Prupe.6G352000_v2.0.a1 |
| pyrus_communis | pycom04g20580 |
| rosa_chinensis | RchiOBHm_Chr3g0449311 |
| rosa_laevigata | RLG00000025840 |
| rosa_multiflora | Rmu_sc0007719.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00427310 |
| rosa_rugosa | Rorug02G0619600 |
| rosa_samantha | Rh3AG017600 Rh3BG017700 Rh3CG016700 Rh3DG018000 |
| rosa_wichuraiana | Rw1G017600 Rw3G001350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1929, 3594 |
| Acc16I | TGCGCA | 1 cut(s) | 933 |
| Acc36I | ACCTGC | 1 cut(s) | 3164 |
| AccB1I | GGYRCC | 2 cut(s) | 2497, 2866 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1377 |
| AccBSI | CCGCTC | 1 cut(s) | 165 |
| AccI | GTMKAC | 1 cut(s) | 2808 |
| AclI | AACGTT | 1 cut(s) | 3038 |
| AcoI | YGGCCR | 1 cut(s) | 2698 |
| AcsI | RAATTY | 9 cut(s) | 116, 352, 1757, 2034, 2102, 2552, 3307, 3659, 3693 |
| AcuI | CTGAAG | 6 cut(s) | 154, 437, 1736, 1881, 2991, 3399 |
| AfaI | GTAC | 6 cut(s) | 155, 380, 1235, 1583, 1895, 3265 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1333, 1360, 1377, 1467, 1890, 2169, 2691 |
| AflIII | ACRYGT | 1 cut(s) | 3361 |
| AjiI | CACGTC | 2 cut(s) | 1377, 3553 |
| AjnI | CCWGG | 2 cut(s) | 2284, 2695 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 608, 640 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3134, 3166 |
| Alw21I | GWGCWC | 1 cut(s) | 2317 |
| Alw26I | GTCTC | 7 cut(s) | 392, 533, 552, 755, 1324, 1692, 3188 |
| Alw44I | GTGCAC | 1 cut(s) | 2313 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 332, 571, 3806 |
| Ama87I | CYCGRG | 1 cut(s) | 2319 |
| ApaI | GGGCCC | 1 cut(s) | 2311 |
| ApaLI | GTGCAC | 1 cut(s) | 2313 |
| ApoI | RAATTY | 9 cut(s) | 116, 352, 1757, 2034, 2102, 2552, 3307, 3659, 3693 |
| AseI | ATTAAT | 1 cut(s) | 2592 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1341 |
| AspLEI | GCGC | 3 cut(s) | 259, 934, 3601 |
| AspS9I | GGNCC | 7 cut(s) | 992, 1324, 1351, 2057, 2307, 2308, 3473 |
| AsuC2I | CCSGG | 1 cut(s) | 884 |
| AsuII | TTCGAA | 1 cut(s) | 52 |
| AvaI | CYCGRG | 1 cut(s) | 2319 |
| AvaII | GGWCC | 2 cut(s) | 992, 1351 |
| BaeGI | GKGCMC | 2 cut(s) | 2311, 2317 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 73, 106 |
| BamHI | GGATCC | 3 cut(s) | 1411, 1632, 3293 |
| BanI | GGYRCC | 2 cut(s) | 2497, 2866 |
| BanII | GRGCYC | 3 cut(s) | 1750, 2311, 3732 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2706, 2738 |
| BauI | CACGAG | 1 cut(s) | 300 |
| BbsI | GAAGAC | 2 cut(s) | 1031, 3708 |
| Bbv12I | GWGCWC | 1 cut(s) | 2317 |
| BbvCI | CCTCAGC | 1 cut(s) | 551 |
| BceAI | ACGGC | 4 cut(s) | 72, 312, 1418, 1862 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 218, 252, 373, 407 |
| BciT130I | CCWGG | 2 cut(s) | 2286, 2697 |
| BciVI | GTATCC | 2 cut(s) | 1830, 3136 |
| BclI | TGATCA | 1 cut(s) | 1870 |
| BcnI | CCSGG | 1 cut(s) | 884 |
| BcoDI | GTCTC | 7 cut(s) | 392, 533, 552, 755, 1324, 1692, 3188 |
| BfaI | CTAG | 3 cut(s) | 1935, 2366, 3029 |
| BfmI | CTRYAG | 6 cut(s) | 1058, 2376, 2850, 2935, 3056, 3171 |
| BfoI | RGCGCY | 1 cut(s) | 260 |
| BfuAI | ACCTGC | 1 cut(s) | 3164 |
| BfuI | GTATCC | 2 cut(s) | 1830, 3136 |
| BglII | AGATCT | 2 cut(s) | 3052, 3320 |
| Bme1390I | CCNGG | 3 cut(s) | 884, 2286, 2697 |
| Bme18I | GGWCC | 2 cut(s) | 992, 1351 |
| BmeT110I | CYCGRG | 1 cut(s) | 2319 |
| BmgBI | CACGTC | 2 cut(s) | 1377, 3553 |
| BmgT120I | GGNCC | 7 cut(s) | 992, 1324, 1351, 2057, 2307, 2308, 3473 |
| BmrFI | CCNGG | 3 cut(s) | 884, 2286, 2697 |
| BmsI | GCATC | 2 cut(s) | 2465, 2967 |
| BpiI | GAAGAC | 2 cut(s) | 1031, 3708 |
| BpmI | CTGGAG | 3 cut(s) | 416, 2833, 3254 |
| Bpu10I | CCTNAGC | 4 cut(s) | 542, 551, 1266, 2391 |
| Bpu14I | TTCGAA | 1 cut(s) | 52 |
| BpuEI | CTTGAG | 6 cut(s) | 1484, 2370, 2403, 2651, 2721, 3149 |
| BpuMI | CCSGG | 1 cut(s) | 884 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1631, 1656 |
| BsaI | GGTCTC | 2 cut(s) | 533, 3188 |
| BsaJI | CCNNGG | 6 cut(s) | 600, 1237, 2318, 2545, 2877, 3276 |
| BsaWI | WCCGGW | 1 cut(s) | 316 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 389, 419, 668, 698, 3227, 3257 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1333, 1360, 1377, 1467, 1890, 2169, 2691 |
| Bse1I | ACTGG | 7 cut(s) | 1415, 1452, 2229, 2376, 2662, 2816, 3660 |
| Bse3DI | GCAATG | 4 cut(s) | 234, 649, 777, 3186 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1631, 1656 |
| BseBI | CCWGG | 2 cut(s) | 2286, 2697 |
| BseDI | CCNNGG | 6 cut(s) | 600, 1237, 2318, 2545, 2877, 3276 |
| BseJI | GATNNNNATC | 2 cut(s) | 1631, 1656 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1333, 1360, 1377, 1467, 1890, 2169, 2691 |
| BseMI | GCAATG | 4 cut(s) | 234, 649, 777, 3186 |
| BseMII | CTCAG | 5 cut(s) | 542, 855, 1062, 1635, 1902 |
| BseNI | ACTGG | 7 cut(s) | 1415, 1452, 2229, 2376, 2662, 2816, 3660 |
| BseSI | GKGCMC | 2 cut(s) | 2311, 2317 |
| BshNI | GGYRCC | 2 cut(s) | 2497, 2866 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2317 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2319 |
| BsiSI | CCGG | 3 cut(s) | 317, 884, 3771 |
| BslFI | GGGAC | 3 cut(s) | 9, 874, 1005 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1333, 1360, 1377, 1467, 1890, 2169, 2691 |
| BsmAI | GTCTC | 7 cut(s) | 392, 533, 552, 755, 1324, 1692, 3188 |
| BsmBI | CGTCTC | 1 cut(s) | 392 |
| BsmFI | GGGAC | 3 cut(s) | 9, 874, 1005 |
| BsmI | GAATGC | 3 cut(s) | 236, 818, 3307 |
| Bso31I | GGTCTC | 2 cut(s) | 533, 3188 |
| BsoBI | CYCGRG | 1 cut(s) | 2319 |
| Bsp119I | TTCGAA | 1 cut(s) | 52 |
| Bsp120I | GGGCCC | 1 cut(s) | 2307 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1750, 2311, 2317, 3732 |
| Bsp1407I | TGTACA | 2 cut(s) | 1581, 3263 |
| Bsp19I | CCATGG | 1 cut(s) | 1237 |
| BspCNI | CTCAG | 5 cut(s) | 543, 856, 1063, 1636, 1903 |
| BspHI | TCATGA | 2 cut(s) | 364, 3751 |
| BspMAI | CTGCAG | 3 cut(s) | 1062, 3060, 3175 |
| BspMI | ACCTGC | 1 cut(s) | 3164 |
| BspQI | GCTCTTC | 2 cut(s) | 266, 1755 |
| BspT104I | TTCGAA | 1 cut(s) | 52 |
| BspT107I | GGYRCC | 2 cut(s) | 2497, 2866 |
| BspTNI | GGTCTC | 2 cut(s) | 533, 3188 |
| BsrBI | CCGCTC | 1 cut(s) | 165 |
| BsrDI | GCAATG | 4 cut(s) | 234, 649, 777, 3186 |
| BsrGI | TGTACA | 2 cut(s) | 1581, 3263 |
| BsrI | ACTGG | 7 cut(s) | 1415, 1452, 2229, 2376, 2662, 2816, 3660 |
| BssECI | CCNNGG | 6 cut(s) | 600, 1237, 2318, 2545, 2877, 3276 |
| BssSI | CACGAG | 1 cut(s) | 300 |
| BssT1I | CCWWGG | 3 cut(s) | 1237, 2877, 3276 |
| Bst2BI | CACGAG | 1 cut(s) | 300 |
| Bst2UI | CCWGG | 2 cut(s) | 2286, 2697 |
| Bst4CI | ACNGT | 9 cut(s) | 38, 403, 1317, 1665, 1686, 1842, 2439, 2936, 2962 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3607 |
| BstAUI | TGTACA | 2 cut(s) | 1581, 3263 |
| BstBI | TTCGAA | 1 cut(s) | 52 |
| BstC8I | GCNNGC | 3 cut(s) | 818, 1458, 2871 |
| BstDSI | CCRYGG | 2 cut(s) | 1237, 2545 |
| BstEII | GGTNACC | 1 cut(s) | 886 |
| BstH2I | RGCGCY | 1 cut(s) | 260 |
| BstHHI | GCGC | 3 cut(s) | 259, 934, 3601 |
| BstMAI | GTCTC | 7 cut(s) | 392, 533, 552, 755, 1324, 1692, 3188 |
| BstNI | CCWGG | 2 cut(s) | 2286, 2697 |
| BstNSI | RCATGY | 4 cut(s) | 1460, 2083, 3161, 3365 |
| BstPI | GGTNACC | 1 cut(s) | 886 |
| BstSCI | CCNGG | 3 cut(s) | 882, 2284, 2695 |
| BstSFI | CTRYAG | 6 cut(s) | 1058, 2376, 2850, 2935, 3056, 3171 |
| BstSLI | GKGCMC | 2 cut(s) | 2311, 2317 |
| BstV2I | GAAGAC | 2 cut(s) | 1031, 3708 |
| BstX2I | RGATCY | 7 cut(s) | 1411, 1632, 2071, 3052, 3293, 3320, 3746 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3246 |
| BstYI | RGATCY | 7 cut(s) | 1411, 1632, 2071, 3052, 3293, 3320, 3746 |
| BsuI | GTATCC | 2 cut(s) | 1830, 3136 |
| BtgI | CCRYGG | 2 cut(s) | 1237, 2545 |
| BtgZI | GCGATG | 1 cut(s) | 292 |
| BtrI | CACGTC | 2 cut(s) | 1377, 3553 |
| BtsIMutI | CAGTG | 3 cut(s) | 1422, 2369, 2958 |
| BveI | ACCTGC | 1 cut(s) | 3164 |
| Cac8I | GCNNGC | 3 cut(s) | 818, 1458, 2871 |
| CaiI | CAGNNNCTG | 3 cut(s) | 332, 571, 3806 |
| CciI | TCATGA | 2 cut(s) | 364, 3751 |
| CfoI | GCGC | 3 cut(s) | 259, 934, 3601 |
| Cfr13I | GGNCC | 7 cut(s) | 992, 1324, 1351, 2057, 2307, 2308, 3473 |
| CseI | GACGC | 1 cut(s) | 2862 |
| Csp6I | GTAC | 6 cut(s) | 154, 379, 1234, 1582, 1894, 3264 |
| CviQI | GTAC | 6 cut(s) | 154, 379, 1234, 1582, 1894, 3264 |
| EaeI | YGGCCR | 1 cut(s) | 2698 |
| EciI | GGCGGA | 2 cut(s) | 214, 689 |
| Eco130I | CCWWGG | 3 cut(s) | 1237, 2877, 3276 |
| Eco147I | AGGCCT | 1 cut(s) | 2684 |
| Eco24I | GRGCYC | 3 cut(s) | 1750, 2311, 3732 |
| Eco31I | GGTCTC | 2 cut(s) | 533, 3188 |
| Eco47I | GGWCC | 2 cut(s) | 992, 1351 |
| Eco57I | CTGAAG | 6 cut(s) | 154, 437, 1736, 1881, 2991, 3399 |
| Eco88I | CYCGRG | 1 cut(s) | 2319 |
| Eco91I | GGTNACC | 1 cut(s) | 886 |
| EcoO109I | RGGNCCY | 3 cut(s) | 992, 2307, 3473 |
| EcoO65I | GGTNACC | 1 cut(s) | 886 |
| EcoRI | GAATTC | 1 cut(s) | 3307 |
| EcoRII | CCWGG | 2 cut(s) | 2284, 2695 |
| EcoT14I | CCWWGG | 3 cut(s) | 1237, 2877, 3276 |
| EcoT22I | ATGCAT | 2 cut(s) | 236, 1708 |
| EcoT38I | GRGCYC | 3 cut(s) | 1750, 2311, 3732 |
| ErhI | CCWWGG | 3 cut(s) | 1237, 2877, 3276 |
| Esp3I | CGTCTC | 1 cut(s) | 392 |
| FaqI | GGGAC | 3 cut(s) | 9, 874, 1005 |
| FauI | CCCGC | 2 cut(s) | 170, 848 |
| FauNDI | CATATG | 2 cut(s) | 1732, 3085 |
| FbaI | TGATCA | 1 cut(s) | 1870 |
| FblI | GTMKAC | 1 cut(s) | 2808 |
| FriOI | GRGCYC | 3 cut(s) | 1750, 2311, 3732 |
| FspBI | CTAG | 3 cut(s) | 1935, 2366, 3029 |
| FspI | TGCGCA | 1 cut(s) | 933 |
| GlaI | GCGC | 3 cut(s) | 258, 933, 3600 |
| GsuI | CTGGAG | 3 cut(s) | 416, 2833, 3254 |
| HaeII | RGCGCY | 1 cut(s) | 260 |
| HapII | CCGG | 3 cut(s) | 317, 884, 3771 |
| HgaI | GACGC | 1 cut(s) | 2862 |
| HhaI | GCGC | 3 cut(s) | 259, 934, 3601 |
| Hin6I | GCGC | 3 cut(s) | 257, 932, 3599 |
| HinP1I | GCGC | 3 cut(s) | 257, 932, 3599 |
| HincII | GTYRAC | 4 cut(s) | 1528, 2407, 3042, 3423 |
| HindII | GTYRAC | 4 cut(s) | 1528, 2407, 3042, 3423 |
| HindIII | AAGCTT | 4 cut(s) | 183, 893, 2583, 3338 |
| HinfI | GANTC | 8 cut(s) | 96, 958, 1046, 2200, 2237, 3022, 3255, 3314 |
| HpaI | GTTAAC | 2 cut(s) | 2407, 3423 |
| HpaII | CCGG | 3 cut(s) | 317, 884, 3771 |
| Hpy99I | CGWCG | 2 cut(s) | 467, 3627 |
| HpyCH4III | ACNGT | 9 cut(s) | 38, 403, 1317, 1665, 1686, 1842, 2439, 2936, 2962 |
| HpyCH4IV | ACGT | 4 cut(s) | 1024, 1376, 3038, 3552 |
| HpySE526I | ACGT | 4 cut(s) | 1024, 1376, 3038, 3552 |
| HspAI | GCGC | 3 cut(s) | 257, 932, 3599 |
| Ksp22I | TGATCA | 1 cut(s) | 1870 |
| KspAI | GTTAAC | 2 cut(s) | 2407, 3423 |
| LguI | GCTCTTC | 2 cut(s) | 266, 1755 |
| LweI | GCATC | 2 cut(s) | 2465, 2967 |
| MaeI | CTAG | 3 cut(s) | 1935, 2366, 3029 |
| MaeII | ACGT | 4 cut(s) | 1024, 1376, 3038, 3552 |
| MaeIII | GTNAC | 5 cut(s) | 504, 886, 2947, 3429, 3651 |
| MbiI | CCGCTC | 1 cut(s) | 165 |
| MfeI | CAATTG | 1 cut(s) | 821 |
| MflI | RGATCY | 7 cut(s) | 1411, 1632, 2071, 3052, 3293, 3320, 3746 |
| MhlI | GDGCHC | 4 cut(s) | 1750, 2311, 2317, 3732 |
| MmeI | TCCRAC | 4 cut(s) | 709, 1629, 1634, 2406 |
| Mph1103I | ATGCAT | 2 cut(s) | 236, 1708 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1341 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1589, 1784, 2513, 3507, 3546 |
| MspA1I | CMGCKG | 1 cut(s) | 2692 |
| MspI | CCGG | 3 cut(s) | 317, 884, 3771 |
| MspR9I | CCNGG | 3 cut(s) | 884, 2286, 2697 |
| MunI | CAATTG | 1 cut(s) | 821 |
| Mva1269I | GAATGC | 3 cut(s) | 236, 818, 3307 |
| MvaI | CCWGG | 2 cut(s) | 2286, 2697 |
| NciI | CCSGG | 1 cut(s) | 884 |
| NcoI | CCATGG | 1 cut(s) | 1237 |
| NdeI | CATATG | 2 cut(s) | 1732, 3085 |
| NmeAIII | GCCGAG | 1 cut(s) | 625 |
| NmuCI | GTSAC | 2 cut(s) | 2947, 3429 |
| NsbI | TGCGCA | 1 cut(s) | 933 |
| NsiI | ATGCAT | 2 cut(s) | 236, 1708 |
| NspI | RCATGY | 4 cut(s) | 1460, 2083, 3161, 3365 |
| NspV | TTCGAA | 1 cut(s) | 52 |
| PaeI | GCATGC | 1 cut(s) | 1460 |
| PagI | TCATGA | 2 cut(s) | 364, 3751 |
| PceI | AGGCCT | 1 cut(s) | 2684 |
| PciI | ACATGT | 1 cut(s) | 3361 |
| PciSI | GCTCTTC | 2 cut(s) | 266, 1755 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 298 |
| PctI | GAATGC | 3 cut(s) | 236, 818, 3307 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1341 |
| PfeI | GAWTC | 8 cut(s) | 96, 958, 1046, 2200, 2237, 3022, 3255, 3314 |
| PflFI | GACNNNGTC | 1 cut(s) | 403 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1377 |
| PpuMI | RGGWCCY | 1 cut(s) | 992 |
| PscI | ACATGT | 1 cut(s) | 3361 |
| PshBI | ATTAAT | 1 cut(s) | 2592 |
| PsiI | TTATAA | 2 cut(s) | 1929, 3594 |
| Psp1406I | AACGTT | 1 cut(s) | 3038 |
| Psp5II | RGGWCCY | 1 cut(s) | 992 |
| Psp6I | CCWGG | 2 cut(s) | 2284, 2695 |
| PspEI | GGTNACC | 1 cut(s) | 886 |
| PspGI | CCWGG | 2 cut(s) | 2284, 2695 |
| PspOMI | GGGCCC | 1 cut(s) | 2307 |
| PspPI | GGNCC | 7 cut(s) | 992, 1324, 1351, 2057, 2307, 2308, 3473 |
| PspPPI | RGGWCCY | 1 cut(s) | 992 |
| PstI | CTGCAG | 3 cut(s) | 1062, 3060, 3175 |
| PstNI | CAGNNNCTG | 3 cut(s) | 332, 571, 3806 |
| PsuI | RGATCY | 7 cut(s) | 1411, 1632, 2071, 3052, 3293, 3320, 3746 |
| PsyI | GACNNNGTC | 1 cut(s) | 403 |
| RsaI | GTAC | 6 cut(s) | 155, 380, 1235, 1583, 1895, 3265 |
| RsaNI | GTAC | 6 cut(s) | 154, 379, 1234, 1582, 1894, 3264 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1589, 1784, 2513, 3507, 3546 |
| SapI | GCTCTTC | 2 cut(s) | 266, 1755 |
| Sau96I | GGNCC | 7 cut(s) | 992, 1324, 1351, 2057, 2307, 2308, 3473 |
| ScrFI | CCNGG | 3 cut(s) | 884, 2286, 2697 |
| SduI | GDGCHC | 4 cut(s) | 1750, 2311, 2317, 3732 |
| SfaNI | GCATC | 2 cut(s) | 2465, 2967 |
| SfcI | CTRYAG | 6 cut(s) | 1058, 2376, 2850, 2935, 3056, 3171 |
| SfuI | TTCGAA | 1 cut(s) | 52 |
| SinI | GGWCC | 2 cut(s) | 992, 1351 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1589, 1784, 2513, 3507, 3546 |
| SmlI | CTYRAG | 6 cut(s) | 1499, 2385, 2418, 2666, 2736, 3128 |
| SmoI | CTYRAG | 6 cut(s) | 1499, 2385, 2418, 2666, 2736, 3128 |
| SphI | GCATGC | 1 cut(s) | 1460 |
| SseBI | AGGCCT | 1 cut(s) | 2684 |
| SspI | AATATT | 1 cut(s) | 1520 |
| SspMI | CTAG | 3 cut(s) | 1935, 2366, 3029 |
| StuI | AGGCCT | 1 cut(s) | 2684 |
| StyD4I | CCNGG | 3 cut(s) | 882, 2284, 2695 |
| StyI | CCWWGG | 3 cut(s) | 1237, 2877, 3276 |
| TaaI | ACNGT | 9 cut(s) | 38, 403, 1317, 1665, 1686, 1842, 2439, 2936, 2962 |
| TaiI | ACGT | 4 cut(s) | 1027, 1379, 3041, 3555 |
| TaqI | TCGA | 9 cut(s) | 52, 178, 197, 465, 531, 1007, 2178, 3178, 3625 |
| TaqII | GACCGA | 1 cut(s) | 1368 |
| TatI | WGTACW | 3 cut(s) | 378, 1581, 3263 |
| TauI | GCSGC | 3 cut(s) | 2695, 2703, 3515 |
| TfiI | GAWTC | 8 cut(s) | 96, 958, 1046, 2200, 2237, 3022, 3255, 3314 |
| TscAI | CASTG | 3 cut(s) | 1422, 2376, 2965 |
| TseFI | GTSAC | 2 cut(s) | 2947, 3429 |
| Tsp45I | GTSAC | 2 cut(s) | 2947, 3429 |
| TspGWI | ACGGA | 8 cut(s) | 141, 276, 1958, 2006, 2007, 2534, 3286, 3463 |
| TspRI | CASTG | 3 cut(s) | 1422, 2376, 2965 |
| Tth111I | GACNNNGTC | 1 cut(s) | 403 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1377 |
| VneI | GTGCAC | 1 cut(s) | 2313 |
| VpaK11BI | GGWCC | 2 cut(s) | 992, 1351 |
| VspI | ATTAAT | 1 cut(s) | 2592 |
| XapI | RAATTY | 9 cut(s) | 116, 352, 1757, 2034, 2102, 2552, 3307, 3659, 3693 |
| XbaI | TCTAGA | 1 cut(s) | 1934 |
| XceI | RCATGY | 4 cut(s) | 1460, 2083, 3161, 3365 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1235, 3162 |
| XmiI | GTMKAC | 1 cut(s) | 2808 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1341 |
| XspI | CTAG | 3 cut(s) | 1935, 2366, 3029 |
| Zsp2I | ATGCAT | 2 cut(s) | 236, 1708 |