ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04340 |
| fragaria_vesca | FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 |
| malus_domestica | MD04G1232400.v1.1 |
| prunus_persica | Prupe.6G352000_v2.0.a1 |
| pyrus_communis | pycom04g20580 |
| rosa_chinensis | RchiOBHm_Chr3g0449311 |
| rosa_laevigata | RLG00000025840 |
| rosa_multiflora | Rmu_sc0007719.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00427310 |
| rosa_rugosa | Rorug02G0619600 |
| rosa_samantha | Rh3AG017600 Rh3BG017700 Rh3CG016700 Rh3DG018000 |
| rosa_wichuraiana | Rw1G017600 Rw3G001350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3582 |
| AarI | CACCTGC | 2 cut(s) | 205, 496 |
| Acc36I | ACCTGC | 4 cut(s) | 205, 496, 2866, 3152 |
| Acc65I | GGTACC | 1 cut(s) | 2854 |
| AccB1I | GGYRCC | 4 cut(s) | 2294, 2383, 2485, 2854 |
| AccI | GTMKAC | 3 cut(s) | 2796, 3207, 3503 |
| AccII | CGCG | 7 cut(s) | 77, 203, 230, 275, 347, 2301, 3168 |
| AclWI | GGATC | 8 cut(s) | 1449, 1615, 1628, 2054, 2141, 2571, 3556, 3678 |
| AcoI | YGGCCR | 2 cut(s) | 263, 1311 |
| AcsI | RAATTY | 4 cut(s) | 1088, 1639, 1745, 2540 |
| AcuI | CTGAAG | 3 cut(s) | 1160, 2033, 3387 |
| AcvI | CACGTG | 1 cut(s) | 2159 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 633, 2679, 3379 |
| AflIII | ACRYGT | 1 cut(s) | 2156 |
| AjnI | CCWGG | 2 cut(s) | 2272, 2683 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3122, 3154 |
| Alw21I | GWGCWC | 4 cut(s) | 176, 225, 2784, 3739 |
| Alw26I | GTCTC | 9 cut(s) | 157, 365, 743, 1068, 1429, 1680, 3125, 3176, 3743 |
| AlwI | GGATC | 8 cut(s) | 1449, 1615, 1628, 2054, 2141, 2571, 3556, 3678 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1409, 3794 |
| Ama87I | CYCGRG | 2 cut(s) | 169, 2307 |
| AoxI | GGCC | 9 cut(s) | 263, 1024, 1210, 1311, 1844, 2045, 2681, 2717, 2834 |
| ApoI | RAATTY | 4 cut(s) | 1088, 1639, 1745, 2540 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 135, 167, 1277, 1309 |
| AsiSI | GCGATCGC | 1 cut(s) | 273 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1329 |
| Asp718I | GGTACC | 1 cut(s) | 2854 |
| AspLEI | GCGC | 2 cut(s) | 79, 2303 |
| AspS9I | GGNCC | 6 cut(s) | 555, 980, 1339, 1399, 2045, 3461 |
| AsuII | TTCGAA | 1 cut(s) | 1542 |
| AvaI | CYCGRG | 2 cut(s) | 169, 2307 |
| AvaII | GGWCC | 5 cut(s) | 555, 980, 1339, 1399, 3461 |
| AxyI | CCTNAGG | 1 cut(s) | 1848 |
| BaeGI | GKGCMC | 1 cut(s) | 2299 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1698, 1731 |
| BalI | TGGCCA | 1 cut(s) | 1313 |
| BamHI | GGATCC | 1 cut(s) | 1620 |
| BanI | GGYRCC | 4 cut(s) | 2294, 2383, 2485, 2854 |
| BanII | GRGCYC | 3 cut(s) | 176, 2784, 3739 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2694, 2726 |
| BbrPI | CACGTG | 1 cut(s) | 2159 |
| BbsI | GAAGAC | 3 cut(s) | 1290, 1709, 3045 |
| Bbv12I | GWGCWC | 4 cut(s) | 176, 225, 2784, 3739 |
| BccI | CCATC | 9 cut(s) | 655, 1556, 1831, 2597, 2615, 2629, 3433, 3609, 3622 |
| BceAI | ACGGC | 2 cut(s) | 390, 1406 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 232, 266, 2878, 2912, 3751, 3785 |
| BciT130I | CCWGG | 2 cut(s) | 2274, 2685 |
| BciVI | GTATCC | 2 cut(s) | 1818, 1976 |
| BclI | TGATCA | 1 cut(s) | 1858 |
| BcoDI | GTCTC | 9 cut(s) | 157, 365, 743, 1068, 1429, 1680, 3125, 3176, 3743 |
| BfaI | CTAG | 4 cut(s) | 408, 2354, 2379, 3674 |
| BfmI | CTRYAG | 5 cut(s) | 1046, 2364, 2838, 2920, 3159 |
| BfuAI | ACCTGC | 4 cut(s) | 205, 496, 2866, 3152 |
| BfuI | GTATCC | 2 cut(s) | 1818, 1976 |
| BlpI | GCTNAGC | 1 cut(s) | 2993 |
| Bme1390I | CCNGG | 2 cut(s) | 2274, 2685 |
| Bme18I | GGWCC | 5 cut(s) | 555, 980, 1339, 1399, 3461 |
| BmeT110I | CYCGRG | 2 cut(s) | 169, 2307 |
| BmgT120I | GGNCC | 6 cut(s) | 555, 980, 1339, 1399, 2045, 3461 |
| BmrFI | CCNGG | 2 cut(s) | 2274, 2685 |
| BmrI | ACTGGG | 1 cut(s) | 1397 |
| BmsI | GCATC | 5 cut(s) | 99, 252, 2453, 2659, 2870 |
| BmuI | ACTGGG | 1 cut(s) | 1397 |
| BpiI | GAAGAC | 3 cut(s) | 1290, 1709, 3045 |
| BpmI | CTGGAG | 6 cut(s) | 97, 389, 2295, 2821, 3242, 3753 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1254 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2993 |
| Bpu14I | TTCGAA | 1 cut(s) | 1542 |
| BpuEI | CTTGAG | 8 cut(s) | 1049, 1472, 2358, 2391, 2639, 2709, 3137, 3665 |
| Bsa29I | ATCGAT | 1 cut(s) | 2787 |
| BsaAI | YACGTR | 2 cut(s) | 1309, 2159 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1619 |
| BsaI | GGTCTC | 2 cut(s) | 3125, 3176 |
| BsaJI | CCNNGG | 4 cut(s) | 228, 1225, 2306, 3264 |
| BsaWI | WCCGGW | 1 cut(s) | 626 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 633, 2679, 3379 |
| Bse118I | RCCGGY | 1 cut(s) | 265 |
| Bse1I | ACTGG | 4 cut(s) | 1403, 1440, 2650, 2804 |
| Bse21I | CCTNAGG | 1 cut(s) | 1848 |
| Bse3DI | GCAATG | 5 cut(s) | 1479, 3094, 3174, 3351, 3502 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1619 |
| BseBI | CCWGG | 2 cut(s) | 2274, 2685 |
| BseCI | ATCGAT | 1 cut(s) | 2787 |
| BseDI | CCNNGG | 4 cut(s) | 228, 1225, 2306, 3264 |
| BseGI | GGATG | 9 cut(s) | 430, 666, 736, 1176, 1842, 1939, 3254, 3444, 3787 |
| BseJI | GATNNNNATC | 1 cut(s) | 1619 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 633, 2679, 3379 |
| BseMI | GCAATG | 5 cut(s) | 1479, 3094, 3174, 3351, 3502 |
| BseMII | CTCAG | 4 cut(s) | 1050, 1623, 1839, 1890 |
| BseNI | ACTGG | 4 cut(s) | 1403, 1440, 2650, 2804 |
| BseSI | GKGCMC | 1 cut(s) | 2299 |
| BseX3I | CGGCCG | 1 cut(s) | 263 |
| BsgI | GTGCAG | 2 cut(s) | 524, 836 |
| Bsh1236I | CGCG | 7 cut(s) | 77, 203, 230, 275, 347, 2301, 3168 |
| Bsh1285I | CGRYCG | 3 cut(s) | 207, 266, 273 |
| BshFI | GGCC | 9 cut(s) | 265, 1026, 1212, 1313, 1846, 2047, 2683, 2719, 2836 |
| BshNI | GGYRCC | 4 cut(s) | 2294, 2383, 2485, 2854 |
| BshVI | ATCGAT | 1 cut(s) | 2787 |
| BsiEI | CGRYCG | 3 cut(s) | 207, 266, 273 |
| BsiHKAI | GWGCWC | 4 cut(s) | 176, 225, 2784, 3739 |
| BsiHKCI | CYCGRG | 2 cut(s) | 169, 2307 |
| BsiSI | CCGG | 4 cut(s) | 262, 266, 290, 627 |
| BslFI | GGGAC | 4 cut(s) | 9, 993, 1181, 3474 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 633, 2679, 3379 |
| BsmAI | GTCTC | 9 cut(s) | 157, 365, 743, 1068, 1429, 1680, 3125, 3176, 3743 |
| BsmBI | CGTCTC | 4 cut(s) | 157, 365, 743, 1429 |
| BsmFI | GGGAC | 4 cut(s) | 9, 993, 1181, 3474 |
| BsnI | GGCC | 9 cut(s) | 265, 1026, 1212, 1313, 1846, 2047, 2683, 2719, 2836 |
| Bso31I | GGTCTC | 2 cut(s) | 3125, 3176 |
| BsoBI | CYCGRG | 2 cut(s) | 169, 2307 |
| Bsp119I | TTCGAA | 1 cut(s) | 1542 |
| Bsp1286I | GDGCHC | 5 cut(s) | 176, 225, 2299, 2784, 3739 |
| Bsp1407I | TGTACA | 4 cut(s) | 1114, 1476, 1569, 3251 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2993 |
| Bsp19I | CCATGG | 1 cut(s) | 1225 |
| BspANI | GGCC | 9 cut(s) | 265, 1026, 1212, 1313, 1846, 2047, 2683, 2719, 2836 |
| BspCNI | CTCAG | 4 cut(s) | 1051, 1624, 1840, 1891 |
| BspDI | ATCGAT | 1 cut(s) | 2787 |
| BspFNI | CGCG | 7 cut(s) | 77, 203, 230, 275, 347, 2301, 3168 |
| BspHI | TCATGA | 2 cut(s) | 2566, 3739 |
| BspMAI | CTGCAG | 2 cut(s) | 1050, 3163 |
| BspMI | ACCTGC | 4 cut(s) | 205, 496, 2866, 3152 |
| BspPI | GGATC | 8 cut(s) | 1449, 1615, 1628, 2054, 2141, 2571, 3556, 3678 |
| BspQI | GCTCTTC | 1 cut(s) | 1544 |
| BspT104I | TTCGAA | 1 cut(s) | 1542 |
| BspT107I | GGYRCC | 4 cut(s) | 2294, 2383, 2485, 2854 |
| BspTNI | GGTCTC | 2 cut(s) | 3125, 3176 |
| BsrDI | GCAATG | 5 cut(s) | 1479, 3094, 3174, 3351, 3502 |
| BsrFI | RCCGGY | 1 cut(s) | 265 |
| BsrGI | TGTACA | 4 cut(s) | 1114, 1476, 1569, 3251 |
| BsrI | ACTGG | 4 cut(s) | 1403, 1440, 2650, 2804 |
| BssAI | RCCGGY | 1 cut(s) | 265 |
| BssECI | CCNNGG | 4 cut(s) | 228, 1225, 2306, 3264 |
| BssT1I | CCWWGG | 2 cut(s) | 1225, 3264 |
| Bst2UI | CCWGG | 2 cut(s) | 2274, 2685 |
| Bst4CI | ACNGT | 7 cut(s) | 1305, 1666, 1830, 1972, 2032, 2924, 3796 |
| Bst6I | CTCTTC | 7 cut(s) | 44, 468, 839, 1544, 2009, 2075, 2171 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 220, 814 |
| BstAUI | TGTACA | 4 cut(s) | 1114, 1476, 1569, 3251 |
| BstBAI | YACGTR | 2 cut(s) | 1309, 2159 |
| BstBI | TTCGAA | 1 cut(s) | 1542 |
| BstC8I | GCNNGC | 8 cut(s) | 225, 267, 453, 756, 1210, 1584, 2299, 3417 |
| BstDEI | CTNAG | 7 cut(s) | 357, 1059, 1254, 1632, 1848, 1899, 2993 |
| BstDSI | CCRYGG | 2 cut(s) | 228, 1225 |
| BstF5I | GGATG | 9 cut(s) | 430, 666, 736, 1176, 1842, 1939, 3254, 3444, 3787 |
| BstFNI | CGCG | 7 cut(s) | 77, 203, 230, 275, 347, 2301, 3168 |
| BstHHI | GCGC | 2 cut(s) | 79, 2303 |
| BstMAI | GTCTC | 9 cut(s) | 157, 365, 743, 1068, 1429, 1680, 3125, 3176, 3743 |
| BstMCI | CGRYCG | 3 cut(s) | 207, 266, 273 |
| BstNI | CCWGG | 2 cut(s) | 2274, 2685 |
| BstSCI | CCNGG | 2 cut(s) | 2272, 2683 |
| BstSFI | CTRYAG | 5 cut(s) | 1046, 2364, 2838, 2920, 3159 |
| BstSLI | GKGCMC | 1 cut(s) | 2299 |
| BstUI | CGCG | 7 cut(s) | 77, 203, 230, 275, 347, 2301, 3168 |
| BstV2I | GAAGAC | 3 cut(s) | 1290, 1709, 3045 |
| BstX2I | RGATCY | 3 cut(s) | 1620, 3561, 3670 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2482, 3234 |
| BstYI | RGATCY | 3 cut(s) | 1620, 3561, 3670 |
| BstZI | CGGCCG | 1 cut(s) | 263 |
| Bsu15I | ATCGAT | 1 cut(s) | 2787 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1848 |
| BsuI | GTATCC | 2 cut(s) | 1818, 1976 |
| BsuRI | GGCC | 9 cut(s) | 265, 1026, 1212, 1313, 1846, 2047, 2683, 2719, 2836 |
| BsuTUI | ATCGAT | 1 cut(s) | 2787 |
| BtgI | CCRYGG | 2 cut(s) | 228, 1225 |
| BtgZI | GCGATG | 1 cut(s) | 1110 |
| BtsCI | GGATG | 9 cut(s) | 430, 666, 736, 1176, 1842, 1939, 3254, 3444, 3787 |
| BtsIMutI | CAGTG | 3 cut(s) | 1410, 2055, 3792 |
| BveI | ACCTGC | 4 cut(s) | 205, 496, 2866, 3152 |
| Cac8I | GCNNGC | 8 cut(s) | 225, 267, 453, 756, 1210, 1584, 2299, 3417 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1409, 3794 |
| CciI | TCATGA | 2 cut(s) | 2566, 3739 |
| CfoI | GCGC | 2 cut(s) | 79, 2303 |
| Cfr10I | RCCGGY | 1 cut(s) | 265 |
| Cfr13I | GGNCC | 6 cut(s) | 555, 980, 1339, 1399, 2045, 3461 |
| Cfr42I | CCGCGG | 1 cut(s) | 231 |
| ClaI | ATCGAT | 1 cut(s) | 2787 |
| CpoI | CGGWCCG | 1 cut(s) | 555 |
| CseI | GACGC | 2 cut(s) | 760, 3489 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 198, 233 |
| CspI | CGGWCCG | 1 cut(s) | 555 |
| DdeI | CTNAG | 7 cut(s) | 357, 1059, 1254, 1632, 1848, 1899, 2993 |
| EaeI | YGGCCR | 2 cut(s) | 263, 1311 |
| EagI | CGGCCG | 1 cut(s) | 263 |
| Eam1104I | CTCTTC | 7 cut(s) | 44, 468, 839, 1544, 2009, 2075, 2171 |
| EarI | CTCTTC | 7 cut(s) | 44, 468, 839, 1544, 2009, 2075, 2171 |
| Ecl136II | GAGCTC | 3 cut(s) | 174, 2782, 3737 |
| EclXI | CGGCCG | 1 cut(s) | 263 |
| Eco130I | CCWWGG | 2 cut(s) | 1225, 3264 |
| Eco147I | AGGCCT | 1 cut(s) | 2836 |
| Eco24I | GRGCYC | 3 cut(s) | 176, 2784, 3739 |
| Eco31I | GGTCTC | 2 cut(s) | 3125, 3176 |
| Eco32I | GATATC | 1 cut(s) | 1939 |
| Eco47I | GGWCC | 5 cut(s) | 555, 980, 1339, 1399, 3461 |
| Eco52I | CGGCCG | 1 cut(s) | 263 |
| Eco53kI | GAGCTC | 3 cut(s) | 174, 2782, 3737 |
| Eco57I | CTGAAG | 3 cut(s) | 1160, 2033, 3387 |
| Eco72I | CACGTG | 1 cut(s) | 2159 |
| Eco81I | CCTNAGG | 1 cut(s) | 1848 |
| Eco88I | CYCGRG | 2 cut(s) | 169, 2307 |
| EcoICRI | GAGCTC | 3 cut(s) | 174, 2782, 3737 |
| EcoO109I | RGGNCCY | 2 cut(s) | 980, 3461 |
| EcoRII | CCWGG | 2 cut(s) | 2272, 2683 |
| EcoRV | GATATC | 1 cut(s) | 1939 |
| EcoT14I | CCWWGG | 2 cut(s) | 1225, 3264 |
| EcoT22I | ATGCAT | 1 cut(s) | 1696 |
| EcoT38I | GRGCYC | 3 cut(s) | 176, 2784, 3739 |
| ErhI | CCWWGG | 2 cut(s) | 1225, 3264 |
| Esp3I | CGTCTC | 4 cut(s) | 157, 365, 743, 1429 |
| FaqI | GGGAC | 4 cut(s) | 9, 993, 1181, 3474 |
| FauI | CCCGC | 2 cut(s) | 444, 2306 |
| FauNDI | CATATG | 1 cut(s) | 3073 |
| FbaI | TGATCA | 1 cut(s) | 1858 |
| FblI | GTMKAC | 3 cut(s) | 2796, 3207, 3503 |
| FokI | GGATG | 9 cut(s) | 437, 673, 743, 1183, 1849, 1946, 3261, 3451, 3794 |
| FriOI | GRGCYC | 3 cut(s) | 176, 2784, 3739 |
| FspBI | CTAG | 4 cut(s) | 408, 2354, 2379, 3674 |
| GlaI | GCGC | 2 cut(s) | 78, 2302 |
| GsuI | CTGGAG | 6 cut(s) | 97, 389, 2295, 2821, 3242, 3753 |
| HaeIII | GGCC | 9 cut(s) | 265, 1026, 1212, 1313, 1846, 2047, 2683, 2719, 2836 |
| HapII | CCGG | 4 cut(s) | 262, 266, 290, 627 |
| HgaI | GACGC | 2 cut(s) | 760, 3489 |
| HhaI | GCGC | 2 cut(s) | 79, 2303 |
| Hin6I | GCGC | 2 cut(s) | 77, 2301 |
| HinP1I | GCGC | 2 cut(s) | 77, 2301 |
| HincII | GTYRAC | 5 cut(s) | 1516, 1649, 1870, 2395, 3411 |
| HindII | GTYRAC | 5 cut(s) | 1516, 1649, 1870, 2395, 3411 |
| HindIII | AAGCTT | 2 cut(s) | 881, 2571 |
| HpaI | GTTAAC | 2 cut(s) | 2395, 3411 |
| HpaII | CCGG | 4 cut(s) | 262, 266, 290, 627 |
| Hpy188I | TCNGA | 7 cut(s) | 559, 895, 1633, 1900, 3081, 3248, 3406 |
| Hpy99I | CGWCG | 2 cut(s) | 1766, 3615 |
| HpyCH4III | ACNGT | 7 cut(s) | 1305, 1666, 1830, 1972, 2032, 2924, 3796 |
| HpyCH4IV | ACGT | 5 cut(s) | 1287, 1308, 1877, 2158, 3775 |
| HpyF3I | CTNAG | 7 cut(s) | 357, 1059, 1254, 1632, 1848, 1899, 2993 |
| HpySE526I | ACGT | 5 cut(s) | 1287, 1308, 1877, 2158, 3775 |
| HspAI | GCGC | 2 cut(s) | 77, 2301 |
| KpnI | GGTACC | 1 cut(s) | 2858 |
| KroI | GCCGGC | 1 cut(s) | 265 |
| KroNI | GCCGGC | 1 cut(s) | 267 |
| Ksp22I | TGATCA | 1 cut(s) | 1858 |
| KspAI | GTTAAC | 2 cut(s) | 2395, 3411 |
| KspI | CCGCGG | 1 cut(s) | 231 |
| LguI | GCTCTTC | 1 cut(s) | 1544 |
| LweI | GCATC | 5 cut(s) | 99, 252, 2453, 2659, 2870 |
| MaeI | CTAG | 4 cut(s) | 408, 2354, 2379, 3674 |
| MaeII | ACGT | 5 cut(s) | 1287, 1308, 1877, 2158, 3775 |
| MaeIII | GTNAC | 4 cut(s) | 131, 326, 352, 874 |
| MflI | RGATCY | 3 cut(s) | 1620, 3561, 3670 |
| MhlI | GDGCHC | 5 cut(s) | 176, 225, 2299, 2784, 3739 |
| MlsI | TGGCCA | 1 cut(s) | 1313 |
| MluNI | TGGCCA | 1 cut(s) | 1313 |
| MlyI | GAGTC | 3 cut(s) | 1043, 1070, 1865 |
| MmeI | TCCRAC | 4 cut(s) | 663, 1622, 2394, 2847 |
| Mox20I | TGGCCA | 1 cut(s) | 1313 |
| Mph1103I | ATGCAT | 1 cut(s) | 1696 |
| MroNI | GCCGGC | 1 cut(s) | 265 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1329 |
| MscI | TGGCCA | 1 cut(s) | 1313 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1577, 1772, 2501, 3495, 3534 |
| Msp20I | TGGCCA | 1 cut(s) | 1313 |
| MspA1I | CMGCKG | 1 cut(s) | 230 |
| MspI | CCGG | 4 cut(s) | 262, 266, 290, 627 |
| MspR9I | CCNGG | 2 cut(s) | 2274, 2685 |
| MvaI | CCWGG | 2 cut(s) | 2274, 2685 |
| MvnI | CGCG | 7 cut(s) | 77, 203, 230, 275, 347, 2301, 3168 |
| NaeI | GCCGGC | 1 cut(s) | 267 |
| NcoI | CCATGG | 1 cut(s) | 1225 |
| NdeI | CATATG | 1 cut(s) | 3073 |
| NgoMIV | GCCGGC | 1 cut(s) | 265 |
| NmuCI | GTSAC | 2 cut(s) | 131, 352 |
| NsiI | ATGCAT | 1 cut(s) | 1696 |
| NspV | TTCGAA | 1 cut(s) | 1542 |
| PaeR7I | CTCGAG | 1 cut(s) | 169 |
| PagI | TCATGA | 2 cut(s) | 2566, 3739 |
| PaqCI | CACCTGC | 2 cut(s) | 205, 496 |
| PceI | AGGCCT | 1 cut(s) | 2836 |
| PciSI | GCTCTTC | 1 cut(s) | 1544 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 950, 3610 |
| PdiI | GCCGGC | 1 cut(s) | 267 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1329 |
| PfeI | GAWTC | 7 cut(s) | 196, 623, 946, 2225, 3010, 3243, 3302 |
| PflFI | GACNNNGTC | 1 cut(s) | 3754 |
| PfoI | TCCNGGA | 1 cut(s) | 2272 |
| Ple19I | CGATCG | 1 cut(s) | 273 |
| PleI | GAGTC | 3 cut(s) | 1042, 1069, 1865 |
| PmaCI | CACGTG | 1 cut(s) | 2159 |
| PmlI | CACGTG | 1 cut(s) | 2159 |
| PpsI | GAGTC | 3 cut(s) | 1042, 1069, 1865 |
| Ppu21I | YACGTR | 2 cut(s) | 1309, 2159 |
| PpuMI | RGGWCCY | 2 cut(s) | 980, 3461 |
| PsiI | TTATAA | 1 cut(s) | 3582 |
| Psp124BI | GAGCTC | 3 cut(s) | 176, 2784, 3739 |
| Psp5II | RGGWCCY | 2 cut(s) | 980, 3461 |
| Psp6I | CCWGG | 2 cut(s) | 2272, 2683 |
| PspCI | CACGTG | 1 cut(s) | 2159 |
| PspGI | CCWGG | 2 cut(s) | 2272, 2683 |
| PspPI | GGNCC | 6 cut(s) | 555, 980, 1339, 1399, 2045, 3461 |
| PspPPI | RGGWCCY | 2 cut(s) | 980, 3461 |
| PspXI | VCTCGAGB | 1 cut(s) | 169 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2016, 2048 |
| PstI | CTGCAG | 2 cut(s) | 1050, 3163 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1409, 3794 |
| PsuI | RGATCY | 3 cut(s) | 1620, 3561, 3670 |
| PsyI | GACNNNGTC | 1 cut(s) | 3754 |
| PvuI | CGATCG | 1 cut(s) | 273 |
| RgaI | GCGATCGC | 1 cut(s) | 273 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1577, 1772, 2501, 3495, 3534 |
| Rsr2I | CGGWCCG | 1 cut(s) | 555 |
| RsrII | CGGWCCG | 1 cut(s) | 555 |
| SacI | GAGCTC | 3 cut(s) | 176, 2784, 3739 |
| SacII | CCGCGG | 1 cut(s) | 231 |
| SapI | GCTCTTC | 1 cut(s) | 1544 |
| Sau96I | GGNCC | 6 cut(s) | 555, 980, 1339, 1399, 2045, 3461 |
| SchI | GAGTC | 3 cut(s) | 1043, 1070, 1865 |
| ScrFI | CCNGG | 2 cut(s) | 2274, 2685 |
| SduI | GDGCHC | 5 cut(s) | 176, 225, 2299, 2784, 3739 |
| SfaAI | GCGATCGC | 1 cut(s) | 273 |
| SfaNI | GCATC | 5 cut(s) | 99, 252, 2453, 2659, 2870 |
| SfcI | CTRYAG | 5 cut(s) | 1046, 2364, 2838, 2920, 3159 |
| Sfr274I | CTCGAG | 1 cut(s) | 169 |
| Sfr303I | CCGCGG | 1 cut(s) | 231 |
| SfuI | TTCGAA | 1 cut(s) | 1542 |
| SgfI | GCGATCGC | 1 cut(s) | 273 |
| SgrBI | CCGCGG | 1 cut(s) | 231 |
| SinI | GGWCC | 5 cut(s) | 555, 980, 1339, 1399, 3461 |
| SlaI | CTCGAG | 1 cut(s) | 169 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1577, 1772, 2501, 3495, 3534 |
| SmlI | CTYRAG | 9 cut(s) | 169, 1028, 1487, 2373, 2406, 2654, 2724, 3116, 3644 |
| SmoI | CTYRAG | 9 cut(s) | 169, 1028, 1487, 2373, 2406, 2654, 2724, 3116, 3644 |
| SseBI | AGGCCT | 1 cut(s) | 2836 |
| SspI | AATATT | 1 cut(s) | 1508 |
| SspMI | CTAG | 4 cut(s) | 408, 2354, 2379, 3674 |
| SstI | GAGCTC | 3 cut(s) | 176, 2784, 3739 |
| StuI | AGGCCT | 1 cut(s) | 2836 |
| StyD4I | CCNGG | 2 cut(s) | 2272, 2683 |
| StyI | CCWWGG | 2 cut(s) | 1225, 3264 |
| TaaI | ACNGT | 7 cut(s) | 1305, 1666, 1830, 1972, 2032, 2924, 3796 |
| TaiI | ACGT | 5 cut(s) | 1290, 1311, 1880, 2161, 3778 |
| TaqII | GACCGA | 1 cut(s) | 1356 |
| TatI | WGTACW | 4 cut(s) | 1114, 1476, 1569, 3251 |
| TauI | GCSGC | 9 cut(s) | 90, 230, 278, 287, 296, 299, 380, 831, 2683 |
| TfiI | GAWTC | 7 cut(s) | 196, 623, 946, 2225, 3010, 3243, 3302 |
| TscAI | CASTG | 3 cut(s) | 1410, 2062, 3799 |
| TseFI | GTSAC | 2 cut(s) | 131, 352 |
| Tsp45I | GTSAC | 2 cut(s) | 131, 352 |
| TspGWI | ACGGA | 7 cut(s) | 11, 246, 862, 1013, 1634, 1946, 3451 |
| TspRI | CASTG | 3 cut(s) | 1410, 2062, 3799 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3754 |
| VpaK11BI | GGWCC | 5 cut(s) | 555, 980, 1339, 1399, 3461 |
| XapI | RAATTY | 4 cut(s) | 1088, 1639, 1745, 2540 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1223 |
| XhoI | CTCGAG | 1 cut(s) | 169 |
| XmiI | GTMKAC | 3 cut(s) | 2796, 3207, 3503 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1329 |
| XspI | CTAG | 4 cut(s) | 408, 2354, 2379, 3674 |
| Zsp2I | ATGCAT | 1 cut(s) | 1696 |