Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0011329

Physical Location & Seq

Genomic Coordinates Reverse (-)

869796 .. 879592

Gene Structure 9797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g01550.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2649 bp

ATGAAGTGGATGTTTGGAAAGAAGGAGGTTGTTGTCCCTAAAGCTGCTGGTCTCCGTTTGTATCACGGGTGGAAGAAGTGGCGTGAAGAAGCTAAGGCAGACCTGAAAAGAAATCTCATAGAAGACGTTGATTTTGGTAAACAGTATGTGGCCAAAAGACAGGAACTTATTCTTCTAGACCGAGATAGGCTGGTGTCAAAGACTTGGTACAATGAGGAAAAAAATAGGTGGGAGATGGACCCAGTTGCTGTTCCTTTTGCCGTCTCAAAGAAACTGGTTGAGGGTGCTCGTATTAGGCATGACTGGGCTGCCATGTACATTGCACTCAAGGGTGATGACAAGGAGTATTACGTTGACATTAAGGAATTTGAAATGCTTTTTGAAGAGTTTGGAGGGTTTGATGGGTTGTACATGAAAATGCTTGCCTGTGGTATTCCAACTGCTGTTCACCTGATGTGGATCCCTTTGTCTGAGTTGGATTTCCGTCAACAGATTCTCTTGACTGCAAGGCTGTCTCACCAATGTTTTAATGCGTTGTGGAAGACAACAGTAGCATCGTATGCAAGAGATTGGGTTATGCAGAAATTTAAAAATATAAACGACGACATAATGATGACAATAGTGTTTCCTATTGTGGAGCTTACGCTCCCCTACTATGTAAGGATACAGTTGGGGATGGCATGGCCTGAGGAAATTGATCAAGCTGTTGACTCAACATGGTACTTGAAATGGCAATCTGAGGCAGAAATGAATTATAAATCCAGAAAAACGGATGGTCTCCAATGGTACATTTGGTTTCTCATGAGAACAGTTGCGTACGGATACGTCTTGTTTCATGTTTTTGGTTTTCTGAAGAGAGAAGTTCCAAGTTTTCTTGGTTATGGGCCAATACGCACAGATCCAAACAGGGAAAAGTTGAGGAGAGTGAAATACTATCTCAATTCCCGGGTAAGAAAAGTTAAACAGAACAAAAAGGCTGGCGTCGATCCTATAACACGTGCTTTTGACGATATGAAGAGGGTAAAGAACCCACCAATACCGTTGAAGGACTTTGCAAGTATTGAATCCATGAAAGAGGAAATCAATGAAGTTGTGGCATTTCTTAAAAATCCTAAAGCCTTTCAAGAAATGGGTGCCCGTGCACCTCGGGGAGTTCTAATTGTGGGTGAGAGGGGAACAGGAAAGACATCTCTAGCACTGGCTATAGCTGCTCAAGCTAGGGTGCCTGTTGTTAACATTAAAGCTCAAGAGTTGGAGGCTGGACTATGGGTTGGGCAAAGTGCATCTAATGTTAGAGAGCTGTTTCAAACAGCTAGAGAATTGGCACCTGTTATCATATTTGTGGAGGATTTTGACCTATTTGCTGGTGTTCGAGGTAAATTCCTTCACACTAAAAATCAGGATCATGAAGCTTTTATCAATCAACTGCTTGTCGAACTTGATGGGTTTGAGAAACAAGATGGGGTTGTATTGATGGCAACCACTGGAAATCTCAAACAAATTGATGATGCCTTACAGAGGCCTGGTCGCATGGATAGGATATTTCATCTTCAAAGGCCAACTCAAGCAGAAAGGGAGAAGATACTACACATGGCAGCAAAAGAAACAATGGATAATGAGCTCATTGATTTTGTAGACTGGAGAAAGGTTGCTGAAAAGACTGCTCTCTTAAGACCTATAGAACTAAAACTGGTACCTGCATCGTTGGAAGCTAGTGCCTTTAGGAGCAAGTTTCTTGATACAGATGAGCTTATGAGCTACTGTAGTTGGTTTGCGACTTTCAGTACCATTATTCCAGAAGGGGTGCGGAAAACCAGAGTTGTGAAGAAGCTAAGCAAAATGCTGGTGAATCATCTGGGGTTAACATTGACTAAAGAAGACCTGCAGAGTGTGGTTGATCTAATGGAGCCATATGGTCAGATAAACAATGGAATAGAACTTCTAAACCCTCCTCTTGAGTGGACGAGGGAGACCAAGTTCCCTCATGCTGTCTGGGCTGCAGGTCGTGGTCTCATTGCCCTTCTGTTACCAAACTTTGATGTTGTAGACAATATATGGCTGGAGCCATTGTCTTGGCAGGGAATCGGATGTACAAAAATAACCAAGGCGAGAAATGAAGGTTCTGTGAATGGCAATTCTGAATCAAGATCATACCTTGAAAAGAAGCTCGTATTTTGTTTTGGTTCGCACATTGCAGCACAAATGCTACTCCCTTTTGGGGAAGAGAACTTGCTGTCTTCTTCAGAGTTAACACAAGCGCAAGAGATTGCTACACGGATGGTTATTCAGTATGGGTGGGGACCTGATGATAGTCCTGCAATATATTATCACAGCAATGCGTCTACTGCTTTAAGCATGGGGAATAACCATGAGTATGATATGGCAGTTAAAGTTGAAAAGATCCATGATTTAGCCTATTTTAAAGCTAAAGAAATGCTCAATCAAAATCGTCGAGTTCTTGAAAAGATAGTTGAGGAGTTGCTTGAGTTTGAAATCTTGACGGCAAAGGATCTAGGAAGAATTTTTGAAGAAAATGGTGGGGTTAGGGAAAAAGAGCCTTTCTTCCTTTCTGGAGCGCATGATAGAGAGACATCGTCTGGCAACTTTCTTGAAGGTGGAGATGTATCAGCCACCATGCTTTTGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005911 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0030054 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

883

Amino Acids

101.27

Weight (kDa)

6.81

Isoelectric Point (pI)

36.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	385 - 518	3.6e-30	ATPase family associated with various cellular activities (AAA)
Peptidase_M41	PF01434	664 - 840	7.7e-12	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011329)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04340
fragaria_vesca	FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550
malus_domestica	MD04G1232400.v1.1
prunus_persica	Prupe.6G352000_v2.0.a1
pyrus_communis	pycom04g20580
rosa_chinensis	RchiOBHm_Chr3g0449311
rosa_laevigata	RLG00000025840
rosa_multiflora	Rmu_sc0007719.1_g000003
rosa_roxburghii	Rroxscaffold_6G00427310
rosa_rugosa	Rorug02G0619600
rosa_samantha	Rh3AG017600 Rh3BG017700 Rh3CG016700 Rh3DG018000
rosa_wichuraiana	Rw1G017600 Rw3G001350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	756
Acc36I	ACCTGC	3 cut(s)	1705, 1890, 1991
Acc65I	GGTACC	1 cut(s)	1693
AccB1I	GGYRCC	4 cut(s)	1133, 1222, 1324, 1693
AccI	GTMKAC	3 cut(s)	1635, 2046, 2342
AciI	CCGC	1 cut(s)	1807
AclWI	GGATC	7 cut(s)	454, 467, 893, 980, 1410, 2395, 2517
AcoI	YGGCCR	1 cut(s)	150
AcsI	RAATTY	4 cut(s)	365, 584, 1379, 2520
AcuI	CTGAAG	2 cut(s)	872, 2226
AcvI	CACGTG	1 cut(s)	998
AcyI	GRCGYC	1 cut(s)	981
AfaI	GTAC	9 cut(s)	209, 317, 410, 722, 788, 818, 1695, 1786, 2092
AfiI	CCNNNNNNNGG	2 cut(s)	1518, 2218
AflII	CTTAAG	1 cut(s)	1669
AflIII	ACRYGT	1 cut(s)	995
AjnI	CCWGG	1 cut(s)	1522
AloI	GAACNNNNNNTCC	2 cut(s)	1961, 1993
Alw21I	GWGCWC	3 cut(s)	289, 1144, 1623
Alw26I	GTCTC	7 cut(s)	56, 268, 519, 782, 1964, 2015, 2582
Alw44I	GTGCAC	1 cut(s)	1140
AlwI	GGATC	7 cut(s)	454, 467, 893, 980, 1410, 2395, 2517
AlwNI	CAGNNNCTG	1 cut(s)	248
Ama87I	CYCGRG	2 cut(s)	945, 1146
AoxI	GGCC	5 cut(s)	150, 683, 884, 1520, 1556
ApaLI	GTGCAC	1 cut(s)	1140
ApeKI	GCWGC	6 cut(s)	44, 308, 1208, 1595, 1997, 2195
ApoI	RAATTY	4 cut(s)	365, 584, 1379, 2520
ArsI	GACNNNNNNTTYG	2 cut(s)	116, 148
Asp700I	GAANNNNTTC	1 cut(s)	168
Asp718I	GGTACC	1 cut(s)	1693
AspLEI	GCGC	2 cut(s)	2260, 2578
AspS9I	GGNCC	3 cut(s)	238, 884, 2300
AsuC2I	CCSGG	2 cut(s)	946, 947
AsuHPI	GGTGA	5 cut(s)	344, 440, 509, 1178, 1858
AvaI	CYCGRG	2 cut(s)	945, 1146
AvaII	GGWCC	2 cut(s)	238, 2300
AxyI	CCTNAGG	1 cut(s)	687
BaeGI	GKGCMC	2 cut(s)	1138, 1144
BalI	TGGCCA	1 cut(s)	152
BamHI	GGATCC	1 cut(s)	459
BanI	GGYRCC	4 cut(s)	1133, 1222, 1324, 1693
BanII	GRGCYC	1 cut(s)	1623
BbrPI	CACGTG	1 cut(s)	998
BbsI	GAAGAC	4 cut(s)	129, 548, 1884, 2229
Bbv12I	GWGCWC	3 cut(s)	289, 1144, 1623
BbvI	GCAGC	6 cut(s)	31, 295, 1195, 1607, 1984, 2207
BccI	CCATC	8 cut(s)	229, 395, 670, 767, 1436, 1454, 1468, 2272
BceAI	ACGGC	2 cut(s)	245, 2517
BciT130I	CCWGG	1 cut(s)	1524
BciVI	GTATCC	2 cut(s)	657, 815
BclI	TGATCA	1 cut(s)	697
BcnI	CCSGG	2 cut(s)	946, 947
BcoDI	GTCTC	7 cut(s)	56, 268, 519, 782, 1964, 2015, 2582
BfaI	CTAG	6 cut(s)	176, 1193, 1218, 1314, 1713, 2513
BfmI	CTRYAG	5 cut(s)	1203, 1677, 1762, 1883, 1998
BfrI	CTTAAG	1 cut(s)	1669
BfuAI	ACCTGC	3 cut(s)	1705, 1890, 1991
BfuI	GTATCC	2 cut(s)	657, 815
BisI	GCNGC	6 cut(s)	45, 309, 1209, 1596, 1998, 2196
BlpI	GCTNAGC	1 cut(s)	1832
BlsI	GCNGC	6 cut(s)	46, 310, 1210, 1597, 1999, 2197
Bme1390I	CCNGG	3 cut(s)	946, 947, 1524
Bme18I	GGWCC	2 cut(s)	238, 2300
BmeT110I	CYCGRG	2 cut(s)	945, 1146
BmgT120I	GGNCC	3 cut(s)	238, 884, 2300
BmiI	GGNNCC	9 cut(s)	240, 461, 1135, 1224, 1326, 1695, 1908, 2064, 2301
BmrFI	CCNGG	3 cut(s)	946, 947, 1524
BmrI	ACTGGG	2 cut(s)	236, 313
BmsI	GCATC	4 cut(s)	563, 1292, 1498, 1709
BmuI	ACTGGG	2 cut(s)	236, 313
BpiI	GAAGAC	4 cut(s)	129, 548, 1884, 2229
BpmI	CTGGAG	3 cut(s)	1660, 2081, 2592
Bpu10I	CCTNAGC	1 cut(s)	93
Bpu1102I	GCTNAGC	1 cut(s)	1832
BpuEI	CTTGAG	6 cut(s)	311, 1197, 1230, 1548, 1976, 2504
BpuMI	CCSGG	2 cut(s)	946, 947
BsaAI	YACGTR	1 cut(s)	998
BsaBI	GATNNNNATC	1 cut(s)	458
BsaHI	GRCGYC	1 cut(s)	981
BsaI	GGTCTC	4 cut(s)	56, 782, 1964, 2015
BsaJI	CCNNGG	3 cut(s)	945, 1145, 2103
BsaXI	ACNNNNNCTCC	4 cut(s)	1961, 1991, 2054, 2084
Bsc4I	CCNNNNNNNGG	2 cut(s)	1518, 2218
Bse1I	ACTGG	7 cut(s)	242, 279, 308, 1203, 1489, 1643, 1695
Bse21I	CCTNAGG	1 cut(s)	687
Bse3DI	GCAATG	4 cut(s)	318, 2013, 2190, 2341
Bse8I	GATNNNNATC	1 cut(s)	458
BseBI	CCWGG	1 cut(s)	1524
BseDI	CCNNGG	3 cut(s)	945, 1145, 2103
BseGI	GGATG	5 cut(s)	15, 681, 778, 2093, 2283
BseJI	GATNNNNATC	1 cut(s)	458
BseLI	CCNNNNNNNGG	2 cut(s)	1518, 2218
BseMI	GCAATG	4 cut(s)	318, 2013, 2190, 2341
BseMII	CTCAG	3 cut(s)	462, 678, 729
BseNI	ACTGG	7 cut(s)	242, 279, 308, 1203, 1489, 1643, 1695
BseRI	GAGGAG	3 cut(s)	934, 1941, 2489
BseSI	GKGCMC	2 cut(s)	1138, 1144
BseXI	GCAGC	6 cut(s)	31, 295, 1195, 1607, 1984, 2207
BshFI	GGCC	5 cut(s)	152, 685, 886, 1522, 1558
BshNI	GGYRCC	4 cut(s)	1133, 1222, 1324, 1693
BsiHKAI	GWGCWC	3 cut(s)	289, 1144, 1623
BsiHKCI	CYCGRG	2 cut(s)	945, 1146
BsiSI	CCGG	1 cut(s)	946
BsiWI	CGTACG	1 cut(s)	816
BslFI	GGGAC	2 cut(s)	20, 2313
BslI	CCNNNNNNNGG	2 cut(s)	1518, 2218
BsmAI	GTCTC	7 cut(s)	56, 268, 519, 782, 1964, 2015, 2582
BsmBI	CGTCTC	1 cut(s)	268
BsmFI	GGGAC	2 cut(s)	20, 2313
BsnI	GGCC	5 cut(s)	152, 685, 886, 1522, 1558
Bso31I	GGTCTC	4 cut(s)	56, 782, 1964, 2015
BsoBI	CYCGRG	2 cut(s)	945, 1146
Bsp1286I	GDGCHC	4 cut(s)	289, 1138, 1144, 1623
Bsp1407I	TGTACA	3 cut(s)	315, 408, 2090
Bsp143I	GATC	9 cut(s)	459, 697, 898, 985, 1402, 1897, 2147, 2400, 2509
Bsp1720I	GCTNAGC	1 cut(s)	1832
BspACI	CCGC	1 cut(s)	1807
BspANI	GGCC	5 cut(s)	152, 685, 886, 1522, 1558
BspCNI	CTCAG	3 cut(s)	463, 679, 730
BspHI	TCATGA	2 cut(s)	801, 1405
BspLI	GGNNCC	9 cut(s)	240, 461, 1135, 1224, 1326, 1695, 1908, 2064, 2301
BspMAI	CTGCAG	2 cut(s)	1887, 2002
BspMI	ACCTGC	3 cut(s)	1705, 1890, 1991
BspPI	GGATC	7 cut(s)	454, 467, 893, 980, 1410, 2395, 2517
BspT107I	GGYRCC	4 cut(s)	1133, 1222, 1324, 1693
BspTI	CTTAAG	1 cut(s)	1669
BspTNI	GGTCTC	4 cut(s)	56, 782, 1964, 2015
BsrDI	GCAATG	4 cut(s)	318, 2013, 2190, 2341
BsrGI	TGTACA	3 cut(s)	315, 408, 2090
BsrI	ACTGG	7 cut(s)	242, 279, 308, 1203, 1489, 1643, 1695
BssECI	CCNNGG	3 cut(s)	945, 1145, 2103
BssMI	GATC	9 cut(s)	459, 697, 898, 985, 1402, 1897, 2147, 2400, 2509
BssNI	GRCGYC	1 cut(s)	981
BssT1I	CCWWGG	1 cut(s)	2103
Bst2UI	CCWGG	1 cut(s)	1524
Bst4CI	ACNGT	6 cut(s)	144, 550, 669, 811, 1041, 1763
Bst6I	CTCTTC	4 cut(s)	378, 848, 1010, 2217
BstACI	GRCGYC	1 cut(s)	981
BstAFI	CTTAAG	1 cut(s)	1669
BstAPI	GCANNNNNTGC	1 cut(s)	560
BstAUI	TGTACA	3 cut(s)	315, 408, 2090
BstBAI	YACGTR	1 cut(s)	998
BstC8I	GCNNGC	2 cut(s)	423, 979
BstDEI	CTNAG	5 cut(s)	93, 471, 687, 738, 1832
BstENI	CCTNNNNNAGG	1 cut(s)	1516
BstF5I	GGATG	5 cut(s)	15, 681, 778, 2093, 2283
BstHHI	GCGC	2 cut(s)	2260, 2578
BstKTI	GATC	9 cut(s)	462, 700, 901, 988, 1405, 1900, 2150, 2403, 2512
BstMAI	GTCTC	7 cut(s)	56, 268, 519, 782, 1964, 2015, 2582
BstMBI	GATC	9 cut(s)	459, 697, 898, 985, 1402, 1897, 2147, 2400, 2509
BstMWI	GCNNNNNNNGC	5 cut(s)	560, 1208, 1214, 1994, 2345
BstNI	CCWGG	1 cut(s)	1524
BstSCI	CCNGG	3 cut(s)	944, 945, 1522
BstSFI	CTRYAG	5 cut(s)	1203, 1677, 1762, 1883, 1998
BstSLI	GKGCMC	2 cut(s)	1138, 1144
BstV1I	GCAGC	6 cut(s)	31, 295, 1195, 1607, 1984, 2207
BstV2I	GAAGAC	4 cut(s)	129, 548, 1884, 2229
BstX2I	RGATCY	4 cut(s)	459, 898, 2400, 2509
BstXI	CCANNNNNNTGG	1 cut(s)	2073
BstYI	RGATCY	4 cut(s)	459, 898, 2400, 2509
Bsu36I	CCTNAGG	1 cut(s)	687
BsuI	GTATCC	2 cut(s)	657, 815
BsuRI	GGCC	5 cut(s)	152, 685, 886, 1522, 1558
BtsCI	GGATG	5 cut(s)	15, 681, 778, 2093, 2283
BtsIMutI	CAGTG	2 cut(s)	1196, 1482
BveI	ACCTGC	3 cut(s)	1705, 1890, 1991
Cac8I	GCNNGC	2 cut(s)	423, 979
CaiI	CAGNNNCTG	1 cut(s)	248
CciI	TCATGA	2 cut(s)	801, 1405
CfoI	GCGC	2 cut(s)	2260, 2578
Cfr13I	GGNCC	3 cut(s)	238, 884, 2300
Cfr9I	CCCGGG	1 cut(s)	945
CseI	GACGC	2 cut(s)	970, 2328
Csp6I	GTAC	9 cut(s)	208, 316, 409, 721, 787, 817, 1694, 1785, 2091
CviQI	GTAC	9 cut(s)	208, 316, 409, 721, 787, 817, 1694, 1785, 2091
DdeI	CTNAG	5 cut(s)	93, 471, 687, 738, 1832
DpnI	GATC	9 cut(s)	461, 699, 900, 987, 1404, 1899, 2149, 2402, 2511
DpnII	GATC	9 cut(s)	459, 697, 898, 985, 1402, 1897, 2147, 2400, 2509
DraI	TTTAAA	2 cut(s)	589, 2422
EaeI	YGGCCR	1 cut(s)	150
Eam1104I	CTCTTC	4 cut(s)	378, 848, 1010, 2217
EarI	CTCTTC	4 cut(s)	378, 848, 1010, 2217
Ecl136II	GAGCTC	1 cut(s)	1621
Eco130I	CCWWGG	1 cut(s)	2103
Eco147I	AGGCCT	1 cut(s)	1522
Eco24I	GRGCYC	1 cut(s)	1623
Eco31I	GGTCTC	4 cut(s)	56, 782, 1964, 2015
Eco47I	GGWCC	2 cut(s)	238, 2300
Eco53kI	GAGCTC	1 cut(s)	1621
Eco57I	CTGAAG	2 cut(s)	872, 2226
Eco72I	CACGTG	1 cut(s)	998
Eco81I	CCTNAGG	1 cut(s)	687
Eco88I	CYCGRG	2 cut(s)	945, 1146
EcoICRI	GAGCTC	1 cut(s)	1621
EcoNI	CCTNNNNNAGG	1 cut(s)	1516
EcoO109I	RGGNCCY	1 cut(s)	2300
EcoRII	CCWGG	1 cut(s)	1522
EcoT14I	CCWWGG	1 cut(s)	2103
EcoT38I	GRGCYC	1 cut(s)	1623
ErhI	CCWWGG	1 cut(s)	2103
Esp3I	CGTCTC	1 cut(s)	268
FaqI	GGGAC	2 cut(s)	20, 2313
FauNDI	CATATG	1 cut(s)	1912
FbaI	TGATCA	1 cut(s)	697
FblI	GTMKAC	3 cut(s)	1635, 2046, 2342
Fnu4HI	GCNGC	6 cut(s)	45, 309, 1209, 1596, 1998, 2196
FokI	GGATG	5 cut(s)	22, 688, 785, 2100, 2290
FriOI	GRGCYC	1 cut(s)	1623
Fsp4HI	GCNGC	6 cut(s)	45, 309, 1209, 1596, 1998, 2196
FspBI	CTAG	6 cut(s)	176, 1193, 1218, 1314, 1713, 2513
GlaI	GCGC	2 cut(s)	2259, 2577
GluI	GCNGC	6 cut(s)	45, 309, 1209, 1596, 1998, 2196
GsuI	CTGGAG	3 cut(s)	1660, 2081, 2592
HaeIII	GGCC	5 cut(s)	152, 685, 886, 1522, 1558
HapII	CCGG	1 cut(s)	946
HgaI	GACGC	2 cut(s)	970, 2328
HhaI	GCGC	2 cut(s)	2260, 2578
Hin1I	GRCGYC	1 cut(s)	981
Hin6I	GCGC	2 cut(s)	2258, 2576
HinP1I	GCGC	2 cut(s)	2258, 2576
HincII	GTYRAC	6 cut(s)	355, 488, 709, 1234, 1863, 2250
HindII	GTYRAC	6 cut(s)	355, 488, 709, 1234, 1863, 2250
HindIII	AAGCTT	1 cut(s)	1410
HinfI	GANTC	6 cut(s)	493, 710, 1064, 1849, 2082, 2141
HpaI	GTTAAC	3 cut(s)	1234, 1863, 2250
HpaII	CCGG	1 cut(s)	946
HphI	GGTGA	5 cut(s)	344, 440, 509, 1178, 1858
Hpy188I	TCNGA	7 cut(s)	472, 739, 852, 1920, 2087, 2140, 2245
Hpy99I	CGWCG	3 cut(s)	605, 986, 2454
HpyAV	CCTTC	7 cut(s)	16, 1039, 1394, 1793, 2030, 2111, 2606
HpyCH4III	ACNGT	6 cut(s)	144, 550, 669, 811, 1041, 1763
HpyCH4IV	ACGT	4 cut(s)	126, 351, 825, 997
HpyF10VI	GCNNNNNNNGC	5 cut(s)	560, 1208, 1214, 1994, 2345
HpyF3I	CTNAG	5 cut(s)	93, 471, 687, 738, 1832
HpySE526I	ACGT	4 cut(s)	126, 351, 825, 997
Hsp92I	GRCGYC	1 cut(s)	981
HspAI	GCGC	2 cut(s)	2258, 2576
KpnI	GGTACC	1 cut(s)	1697
Ksp22I	TGATCA	1 cut(s)	697
KspAI	GTTAAC	3 cut(s)	1234, 1863, 2250
Kzo9I	GATC	9 cut(s)	459, 697, 898, 985, 1402, 1897, 2147, 2400, 2509
LmnI	GCTCC	6 cut(s)	637, 651, 1725, 1906, 2062, 2573
Lsp1109I	GCAGC	6 cut(s)	31, 295, 1195, 1607, 1984, 2207
LweI	GCATC	4 cut(s)	563, 1292, 1498, 1709
MaeI	CTAG	6 cut(s)	176, 1193, 1218, 1314, 1713, 2513
MaeII	ACGT	4 cut(s)	126, 351, 825, 997
MaeIII	GTNAC	1 cut(s)	2025
MalI	GATC	9 cut(s)	461, 699, 900, 987, 1404, 1899, 2149, 2402, 2511
MboI	GATC	9 cut(s)	459, 697, 898, 985, 1402, 1897, 2147, 2400, 2509
MflI	RGATCY	4 cut(s)	459, 898, 2400, 2509
MhlI	GDGCHC	4 cut(s)	289, 1138, 1144, 1623
MlsI	TGGCCA	1 cut(s)	152
MluNI	TGGCCA	1 cut(s)	152
MlyI	GAGTC	1 cut(s)	704
MmeI	TCCRAC	4 cut(s)	456, 461, 1233, 1686
Mox20I	TGGCCA	1 cut(s)	152
MroXI	GAANNNNTTC	1 cut(s)	168
MscI	TGGCCA	1 cut(s)	152
MslI	CAYNNNNRTG	5 cut(s)	416, 611, 1340, 2334, 2373
Msp20I	TGGCCA	1 cut(s)	152
MspCI	CTTAAG	1 cut(s)	1669
MspI	CCGG	1 cut(s)	946
MspR9I	CCNGG	3 cut(s)	946, 947, 1524
MvaI	CCWGG	1 cut(s)	1524
MwoI	GCNNNNNNNGC	5 cut(s)	560, 1208, 1214, 1994, 2345
NciI	CCSGG	2 cut(s)	946, 947
NdeI	CATATG	1 cut(s)	1912
NdeII	GATC	9 cut(s)	459, 697, 898, 985, 1402, 1897, 2147, 2400, 2509
NlaIV	GGNNCC	9 cut(s)	240, 461, 1135, 1224, 1326, 1695, 1908, 2064, 2301
PagI	TCATGA	2 cut(s)	801, 1405
PceI	AGGCCT	1 cut(s)	1522
PdmI	GAANNNNTTC	1 cut(s)	168
PfeI	GAWTC	5 cut(s)	493, 1064, 1849, 2082, 2141
Pfl23II	CGTACG	1 cut(s)	816
PflFI	GACNNNGTC	1 cut(s)	2593
PkrI	GCNGC	6 cut(s)	46, 310, 1210, 1597, 1999, 2197
PleI	GAGTC	1 cut(s)	704
PmaCI	CACGTG	1 cut(s)	998
PmlI	CACGTG	1 cut(s)	998
PpsI	GAGTC	1 cut(s)	704
Ppu21I	YACGTR	1 cut(s)	998
PpuMI	RGGWCCY	1 cut(s)	2300
PsiI	TTATAA	1 cut(s)	756
Psp124BI	GAGCTC	1 cut(s)	1623
Psp5II	RGGWCCY	1 cut(s)	2300
Psp6I	CCWGG	1 cut(s)	1522
PspCI	CACGTG	1 cut(s)	998
PspGI	CCWGG	1 cut(s)	1522
PspLI	CGTACG	1 cut(s)	816
PspN4I	GGNNCC	9 cut(s)	240, 461, 1135, 1224, 1326, 1695, 1908, 2064, 2301
PspPI	GGNCC	3 cut(s)	238, 884, 2300
PspPPI	RGGWCCY	1 cut(s)	2300
PstI	CTGCAG	2 cut(s)	1887, 2002
PstNI	CAGNNNCTG	1 cut(s)	248
PsuI	RGATCY	4 cut(s)	459, 898, 2400, 2509
PsyI	GACNNNGTC	1 cut(s)	2593
RsaI	GTAC	9 cut(s)	209, 317, 410, 722, 788, 818, 1695, 1786, 2092
RsaNI	GTAC	9 cut(s)	208, 316, 409, 721, 787, 817, 1694, 1785, 2091
RseI	CAYNNNNRTG	5 cut(s)	416, 611, 1340, 2334, 2373
SacI	GAGCTC	1 cut(s)	1623
SatI	GCNGC	6 cut(s)	45, 309, 1209, 1596, 1998, 2196
Sau3AI	GATC	9 cut(s)	459, 697, 898, 985, 1402, 1897, 2147, 2400, 2509
Sau96I	GGNCC	3 cut(s)	238, 884, 2300
SchI	GAGTC	1 cut(s)	704
ScrFI	CCNGG	3 cut(s)	946, 947, 1524
SduI	GDGCHC	4 cut(s)	289, 1138, 1144, 1623
SfaNI	GCATC	4 cut(s)	563, 1292, 1498, 1709
SfcI	CTRYAG	5 cut(s)	1203, 1677, 1762, 1883, 1998
SinI	GGWCC	2 cut(s)	238, 2300
SmaI	CCCGGG	1 cut(s)	947
SmiMI	CAYNNNNRTG	5 cut(s)	416, 611, 1340, 2334, 2373
SmlI	CTYRAG	7 cut(s)	326, 1212, 1245, 1563, 1669, 1955, 2483
SmoI	CTYRAG	7 cut(s)	326, 1212, 1245, 1563, 1669, 1955, 2483
SseBI	AGGCCT	1 cut(s)	1522
SsiI	CCGC	1 cut(s)	1807
SspMI	CTAG	6 cut(s)	176, 1193, 1218, 1314, 1713, 2513
SstI	GAGCTC	1 cut(s)	1623
StuI	AGGCCT	1 cut(s)	1522
StyD4I	CCNGG	3 cut(s)	944, 945, 1522
StyI	CCWWGG	1 cut(s)	2103
TaaI	ACNGT	6 cut(s)	144, 550, 669, 811, 1041, 1763
TaiI	ACGT	4 cut(s)	129, 354, 828, 1000
TaqI	TCGA	4 cut(s)	984, 1372, 1434, 2452
TaqII	GACCGA	1 cut(s)	195
TatI	WGTACW	3 cut(s)	315, 408, 2090
TfiI	GAWTC	5 cut(s)	493, 1064, 1849, 2082, 2141
TscAI	CASTG	2 cut(s)	1203, 1489
TseI	GCWGC	6 cut(s)	44, 308, 1208, 1595, 1997, 2195
TspGWI	ACGGA	5 cut(s)	44, 473, 785, 834, 2290
TspMI	CCCGGG	1 cut(s)	945
TspRI	CASTG	2 cut(s)	1203, 1489
Tth111I	GACNNNGTC	1 cut(s)	2593
Vha464I	CTTAAG	1 cut(s)	1669
VneI	GTGCAC	1 cut(s)	1140
VpaK11BI	GGWCC	2 cut(s)	238, 2300
XagI	CCTNNNNNAGG	1 cut(s)	1516
XapI	RAATTY	4 cut(s)	365, 584, 1379, 2520
XbaI	TCTAGA	1 cut(s)	175
XmaI	CCCGGG	1 cut(s)	945
XmiI	GTMKAC	3 cut(s)	1635, 2046, 2342
XmnI	GAANNNNTTC	1 cut(s)	168
XspI	CTAG	6 cut(s)	176, 1193, 1218, 1314, 1713, 2513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.