ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04340 |
| fragaria_vesca | FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 |
| malus_domestica | MD04G1232400.v1.1 |
| prunus_persica | Prupe.6G352000_v2.0.a1 |
| pyrus_communis | pycom04g20580 |
| rosa_chinensis | RchiOBHm_Chr3g0449311 |
| rosa_laevigata | RLG00000025840 |
| rosa_multiflora | Rmu_sc0007719.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00427310 |
| rosa_rugosa | Rorug02G0619600 |
| rosa_samantha | Rh3AG017600 Rh3BG017700 Rh3CG016700 Rh3DG018000 |
| rosa_wichuraiana | Rw1G017600 Rw3G001350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 97 |
| AcsI | RAATTY | 1 cut(s) | 13 |
| AgsI | TTSAA | 1 cut(s) | 307 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 17, 49 |
| AluBI | AGCT | 2 cut(s) | 265, 370 |
| AluI | AGCT | 2 cut(s) | 265, 370 |
| ApoI | RAATTY | 1 cut(s) | 13 |
| BanI | GGYRCC | 1 cut(s) | 97 |
| BbsI | GAAGAC | 1 cut(s) | 335 |
| BccI | CCATC | 1 cut(s) | 217 |
| BfmI | CTRYAG | 1 cut(s) | 145 |
| BmiI | GGNNCC | 1 cut(s) | 99 |
| BpiI | GAAGAC | 1 cut(s) | 335 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 53, 85 |
| BpuEI | CTTGAG | 1 cut(s) | 80 |
| BseGI | GGATG | 1 cut(s) | 209 |
| BseMII | CTCAG | 1 cut(s) | 116 |
| BseRI | GAGGAG | 1 cut(s) | 329 |
| BshNI | GGYRCC | 1 cut(s) | 97 |
| BspCNI | CTCAG | 1 cut(s) | 115 |
| BspHI | TCATGA | 1 cut(s) | 330 |
| BspLI | GGNNCC | 1 cut(s) | 99 |
| BspT107I | GGYRCC | 1 cut(s) | 97 |
| Bst4CI | ACNGT | 1 cut(s) | 222 |
| BstC8I | GCNNGC | 1 cut(s) | 322 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstF5I | GGATG | 1 cut(s) | 209 |
| BstSFI | CTRYAG | 1 cut(s) | 145 |
| BstV2I | GAAGAC | 1 cut(s) | 335 |
| BtsCI | GGATG | 1 cut(s) | 209 |
| BtsIMutI | CAGTG | 2 cut(s) | 5, 24 |
| Cac8I | GCNNGC | 1 cut(s) | 322 |
| CciI | TCATGA | 1 cut(s) | 330 |
| CviAII | CATG | 1 cut(s) | 331 |
| CviJI | RGCY | 7 cut(s) | 47, 69, 265, 278, 320, 364, 370 |
| CviKI_1 | RGCY | 7 cut(s) | 47, 69, 265, 278, 320, 364, 370 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| Eco32I | GATATC | 1 cut(s) | 142 |
| EcoRV | GATATC | 1 cut(s) | 142 |
| FaeI | CATG | 1 cut(s) | 334 |
| FaiI | YATR | 6 cut(s) | 108, 113, 147, 241, 252, 332 |
| FatI | CATG | 1 cut(s) | 330 |
| FokI | GGATG | 1 cut(s) | 196 |
| Hin1II | CATG | 1 cut(s) | 334 |
| HinfI | GANTC | 1 cut(s) | 327 |
| Hpy166II | GTNNAC | 1 cut(s) | 206 |
| Hpy188I | TCNGA | 1 cut(s) | 374 |
| Hpy188III | TCNNGA | 1 cut(s) | 331 |
| Hpy8I | GTNNAC | 1 cut(s) | 206 |
| HpyAV | CCTTC | 1 cut(s) | 293 |
| HpyCH4III | ACNGT | 1 cut(s) | 222 |
| HpyCH4V | TGCA | 3 cut(s) | 189, 324, 351 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| Hsp92II | CATG | 1 cut(s) | 334 |
| LpnPI | CCDG | 2 cut(s) | 25, 251 |
| MaeIII | GTNAC | 2 cut(s) | 73, 124 |
| MboII | GAAGA | 3 cut(s) | 34, 335, 346 |
| MluCI | AATT | 2 cut(s) | 13, 171 |
| MnlI | CCTC | 7 cut(s) | 37, 110, 111, 177, 249, 307, 310 |
| MseI | TTAA | 1 cut(s) | 293 |
| MspA1I | CMGCKG | 1 cut(s) | 265 |
| NlaIII | CATG | 1 cut(s) | 334 |
| NlaIV | GGNNCC | 1 cut(s) | 99 |
| NmuCI | GTSAC | 2 cut(s) | 73, 124 |
| PagI | TCATGA | 1 cut(s) | 330 |
| PfeI | GAWTC | 1 cut(s) | 327 |
| PspN4I | GGNNCC | 1 cut(s) | 99 |
| PvuII | CAGCTG | 1 cut(s) | 265 |
| SaqAI | TTAA | 1 cut(s) | 293 |
| SetI | ASST | 6 cut(s) | 103, 121, 188, 267, 304, 372 |
| SfcI | CTRYAG | 1 cut(s) | 145 |
| SgeI | CNNG | 9 cut(s) | 52, 71, 128, 134, 178, 278, 333, 343, 368 |
| SmlI | CTYRAG | 1 cut(s) | 59 |
| SmoI | CTYRAG | 1 cut(s) | 59 |
| Sse9I | AATT | 2 cut(s) | 13, 171 |
| TaaI | ACNGT | 1 cut(s) | 222 |
| TasI | AATT | 2 cut(s) | 13, 171 |
| TfiI | GAWTC | 1 cut(s) | 327 |
| Tru1I | TTAA | 1 cut(s) | 293 |
| Tru9I | TTAA | 1 cut(s) | 293 |
| TscAI | CASTG | 2 cut(s) | 12, 24 |
| TseFI | GTSAC | 2 cut(s) | 73, 124 |
| Tsp45I | GTSAC | 2 cut(s) | 73, 124 |
| TspDTI | ATGAA | 3 cut(s) | 312, 319, 347 |
| TspRI | CASTG | 2 cut(s) | 12, 24 |
| XapI | RAATTY | 1 cut(s) | 13 |