AT3G05140
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
1435617 .. 1438539
2923 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G05140.2

Sequence Viewer

Length: 1383 bp
ATGAATTCTGCTTCAGCTCATGATCTAAGATTACTAGAGGTAGATAAAGAGAAGCAAGACCCCAAATCACCAAGAGGAGCCCTCGAAGCCTGCTTAACTCGTTGCTCAATCTCTTCCGCTTCATCTTCATCTGACGATCCTCCTCCAAACAGAGAAGCTATCGACAATGCAGATGCAGACACAGACGTACAGTGCAAGAATCACAGAGCATCTTCTAATTGGGGAAAATTCTTCAAGCTATGGAAACGCAGATCCATGAAACGCCTCTCTTCCTTTCCTCCATTAAGTGGCGCCGCCCCACCGATCATCAAACAAAACAAAAGTGCAGATCCAAACATGAATGGCATGGTCCTTCACGATATCTACGATTTCCAATCATCTCTCCAAAACTTCTCAATATCTGACATCGAAATTGCAACTGACAATTTCAGTCCAGAAAACATTATCGGTAGAGGCGGTTACGCCGATGTATACCAGGGAATTCTACCGGAAGGAAAGCTAATCGCTGTGAAACGTTTGACAAAAGGCACACCGGACGAGCAAACAGCTGAGTTTCTATCGGAACTTGGGATTATTGCTCATGTTGATCATCCTAACACTGCCAAATTCATCGGTTGTTGCATCGAGGGTGGAATGCATCTCGTGTTCCGGCTATCTCCTCTTGGAAGCTTAGGCTCTCTCCTCCATGGACCATCAAAATATAAGCTGACTTGGAGCAGACGTTACAATGTAGCGTTAGGAACAGCAGATGGACTAGTGTATCTTCATGAGGGTTGTCAAAGACGAATCATTCATCGAGACATCAAAGCTGATAATATTCTTCTCACCGAAGATTTTCAACCGCAGATTTGCGACTTCGGGTTAGCCAAATGGCTTCCCAAGCAATTGACACACCATAACGTATCCAAATTTGAGGGAACATTCGGGTACTTTGCACCTGAATATTTCATGCACGGAATCGTGGACGAGAAGACTGATGTTTTCGCTTTTGGAGTTCTCCTCTTGGAGCTCATAACCGGACATCCTGCCCTTGACGAGTCTCAGCAGAGCCTTGTCTTATGGGCTAAGCCGTTGCTAGAGAGAAAAGCTATAAAAGAATTGGTGGATCCATCTCTTGGAGATGAGTATAACCGAGAAGAGCTTATCCGGTTAACTTCCACGGCTTCTTTATGCATCGATCAATCTTCTCTTCTACGACCCCGGATGAGCCAGGTTGTGGAATTATTACTAGGCCACGAAGATGTCGTAATGACTCCAAGAGAAGCGAAGATAAAGATGATGCAACGAACGTATTCCGAAGAATTATTAGATAGTGTAGAATATAACTCCACTAAGTACTTGGGAGATCTTGATCGCATTCGAGAGGTTGCTTTAGCCTCTTGA

Protein Analysis

460

Amino Acids

51.42

Weight (kDa)

5.82

Isoelectric Point (pI)

44.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 193 - 398 2e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 195 - 403 1.9e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 290
AccB7I CCANNNNNTGG 3 cut(s) 287, 1115, 1216
AccI GTMKAC 1 cut(s) 471
AciI CCGC 4 cut(s) 117, 294, 456, 842
AclI AACGTT 1 cut(s) 514
AclWI GGATC 5 cut(s) 131, 246, 323, 1100, 1113
AcsI RAATTY 5 cut(s) 4, 227, 480, 605, 908
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 3 cut(s) 189, 929, 1337
AfiI CCNNNNNNNGG 3 cut(s) 287, 1115, 1216
AgsI TTSAA 2 cut(s) 235, 839
AhlI ACTAGT 1 cut(s) 754
AjnI CCWGG 2 cut(s) 474, 1209
Alw21I GWGCWC 1 cut(s) 1011
Alw26I GTCTC 2 cut(s) 792, 1044
AlwI GGATC 5 cut(s) 131, 246, 323, 1100, 1113
AoxI GGCC 1 cut(s) 1231
ApoI RAATTY 5 cut(s) 4, 227, 480, 605, 908
Asp700I GAANNNNTTC 2 cut(s) 834, 1291
AspLEI GCGC 1 cut(s) 293
AspS9I GGNCC 2 cut(s) 349, 689
AsuC2I CCSGG 1 cut(s) 1201
AsuHPI GGTGA 2 cut(s) 60, 817
AvaII GGWCC 2 cut(s) 349, 689
BaeI ACNNNNGTAYC 2 cut(s) 743, 776
BamHI GGATCC 1 cut(s) 1105
BanI GGYRCC 1 cut(s) 290
BanII GRGCYC 2 cut(s) 82, 1011
BauI CACGAG 1 cut(s) 641
BbsI GAAGAC 1 cut(s) 977
Bbv12I GWGCWC 1 cut(s) 1011
BccI CCATC 3 cut(s) 700, 743, 1117
BceAI ACGGC 2 cut(s) 1054, 1176
BciT130I CCWGG 2 cut(s) 476, 1211
BciVI GTATCC 1 cut(s) 913
BclI TGATCA 1 cut(s) 586
BcnI CCSGG 1 cut(s) 1201
BcoDI GTCTC 2 cut(s) 792, 1044
BcuI ACTAGT 1 cut(s) 754
BfaI CTAG 4 cut(s) 35, 755, 1076, 1229
BfoI RGCGCY 1 cut(s) 294
BfuI GTATCC 1 cut(s) 913
BglII AGATCT 1 cut(s) 1345
BisI GCNGC 1 cut(s) 294
BlpI GCTNAGC 1 cut(s) 1065
BlsI GCNGC 1 cut(s) 295
BmcAI AGTACT 1 cut(s) 1337
Bme1390I CCNGG 3 cut(s) 476, 1201, 1211
Bme18I GGWCC 2 cut(s) 349, 689
BmgT120I GGNCC 2 cut(s) 349, 689
BmiI GGNNCC 3 cut(s) 79, 292, 1107
BmrFI CCNGG 3 cut(s) 476, 1201, 1211
BmsI GCATC 6 cut(s) 163, 218, 630, 646, 1182, 1269
BpiI GAAGAC 1 cut(s) 977
BplI GAGNNNNNCTC 4 cut(s) 66, 98, 984, 1016
Bpu10I CCTNAGC 1 cut(s) 670
Bpu1102I GCTNAGC 1 cut(s) 1065
BpuMI CCSGG 1 cut(s) 1201
Bsa29I ATCGAT 1 cut(s) 1176
BsaBI GATNNNNATC 1 cut(s) 1350
BsaHI GRCGYC 1 cut(s) 291
BsaJI CCNNGG 4 cut(s) 475, 685, 1158, 1199
BsaWI WCCGGW 4 cut(s) 487, 532, 1016, 1146
BsaXI ACNNNNNCTCC 2 cut(s) 706, 736
Bsc4I CCNNNNNNNGG 3 cut(s) 287, 1115, 1216
Bse8I GATNNNNATC 1 cut(s) 1350
BseBI CCWGG 2 cut(s) 476, 1211
BseCI ATCGAT 1 cut(s) 1176
BseDI CCNNGG 4 cut(s) 475, 685, 1158, 1199
BseGI GGATG 3 cut(s) 589, 1021, 1209
BseJI GATNNNNATC 1 cut(s) 1350
BseLI CCNNNNNNNGG 3 cut(s) 287, 1115, 1216
BseMII CTCAG 2 cut(s) 540, 1055
BseRI GAGGAG 5 cut(s) 90, 132, 648, 671, 989
BsgI GTGCAG 1 cut(s) 345
BshFI GGCC 1 cut(s) 1233
BshNI GGYRCC 1 cut(s) 290
BshVI ATCGAT 1 cut(s) 1176
BsiHKAI GWGCWC 1 cut(s) 1011
BsiSI CCGG 6 cut(s) 488, 533, 649, 1017, 1147, 1201
BslI CCNNNNNNNGG 3 cut(s) 287, 1115, 1216
BsmAI GTCTC 2 cut(s) 792, 1044
BsmI GAATGC 2 cut(s) 639, 1356
BsnI GGCC 1 cut(s) 1233
Bsp1286I GDGCHC 2 cut(s) 82, 1011
Bsp1720I GCTNAGC 1 cut(s) 1065
Bsp19I CCATGG 1 cut(s) 685
BspACI CCGC 4 cut(s) 117, 294, 456, 842
BspANI GGCC 1 cut(s) 1233
BspCNI CTCAG 2 cut(s) 541, 1054
BspDI ATCGAT 1 cut(s) 1176
BspHI TCATGA 2 cut(s) 19, 766
BspLI GGNNCC 3 cut(s) 79, 292, 1107
BspPI GGATC 5 cut(s) 131, 246, 323, 1100, 1113
BspQI GCTCTTC 1 cut(s) 1131
BspT107I GGYRCC 1 cut(s) 290
BssECI CCNNGG 4 cut(s) 475, 685, 1158, 1199
BssNAI GTATAC 1 cut(s) 472
BssNI GRCGYC 1 cut(s) 291
BssSI CACGAG 1 cut(s) 641
BssT1I CCWWGG 1 cut(s) 685
Bst1107I GTATAC 1 cut(s) 472
Bst2BI CACGAG 1 cut(s) 641
Bst2UI CCWGG 2 cut(s) 476, 1211
Bst4CI ACNGT 1 cut(s) 192
Bst6I CTCTTC 4 cut(s) 118, 274, 1131, 1194
BstACI GRCGYC 1 cut(s) 291
BstC8I GCNNGC 1 cut(s) 91
BstDEI CTNAG 6 cut(s) 26, 549, 670, 1041, 1065, 1332
BstDSI CCRYGG 2 cut(s) 685, 1158
BstF5I GGATG 3 cut(s) 589, 1021, 1209
BstH2I RGCGCY 1 cut(s) 294
BstHHI GCGC 1 cut(s) 293
BstMAI GTCTC 2 cut(s) 792, 1044
BstMWI GCNNNNNNNGC 2 cut(s) 86, 880
BstNI CCWGG 2 cut(s) 476, 1211
BstSCI CCNGG 3 cut(s) 474, 1199, 1209
BstV2I GAAGAC 1 cut(s) 977
BstX2I RGATCY 4 cut(s) 251, 328, 1105, 1345
BstYI RGATCY 4 cut(s) 251, 328, 1105, 1345
BstZ17I GTATAC 1 cut(s) 472
Bsu15I ATCGAT 1 cut(s) 1176
BsuI GTATCC 1 cut(s) 913
BsuRI GGCC 1 cut(s) 1233
BsuTUI ATCGAT 1 cut(s) 1176
BtgI CCRYGG 2 cut(s) 685, 1158
BtsCI GGATG 3 cut(s) 589, 1021, 1209
BtsI GCAGTG 1 cut(s) 597
BtsIMutI CAGTG 2 cut(s) 197, 597
Cac8I GCNNGC 1 cut(s) 91
CciI TCATGA 2 cut(s) 19, 766
CfoI GCGC 1 cut(s) 293
Cfr13I GGNCC 2 cut(s) 349, 689
ClaI ATCGAT 1 cut(s) 1176
Csp6I GTAC 3 cut(s) 188, 928, 1336
CviAII CATG 8 cut(s) 20, 256, 337, 346, 581, 686, 767, 949
CviQI GTAC 3 cut(s) 188, 928, 1336
DdeI CTNAG 6 cut(s) 26, 549, 670, 1041, 1065, 1332
DinI GGCGCC 1 cut(s) 292
Eam1104I CTCTTC 4 cut(s) 118, 274, 1131, 1194
EarI CTCTTC 4 cut(s) 118, 274, 1131, 1194
Ecl136II GAGCTC 1 cut(s) 1009
Eco130I CCWWGG 1 cut(s) 685
Eco24I GRGCYC 2 cut(s) 82, 1011
Eco32I GATATC 1 cut(s) 361
Eco47I GGWCC 2 cut(s) 349, 689
Eco53kI GAGCTC 1 cut(s) 1009
EcoICRI GAGCTC 1 cut(s) 1009
EcoRI GAATTC 2 cut(s) 4, 480
EcoRII CCWGG 2 cut(s) 474, 1209
EcoRV GATATC 1 cut(s) 361
EcoT14I CCWWGG 1 cut(s) 685
EcoT22I ATGCAT 2 cut(s) 639, 1175
EcoT38I GRGCYC 2 cut(s) 82, 1011
EgeI GGCGCC 1 cut(s) 292
EheI GGCGCC 1 cut(s) 292
ErhI CCWWGG 1 cut(s) 685
FaeI CATG 8 cut(s) 23, 259, 340, 349, 584, 689, 770, 952
FatI CATG 8 cut(s) 19, 255, 336, 345, 580, 685, 766, 948
FbaI TGATCA 1 cut(s) 586
FblI GTMKAC 1 cut(s) 471
Fnu4HI GCNGC 1 cut(s) 294
FokI GGATG 3 cut(s) 576, 1008, 1216
FriOI GRGCYC 2 cut(s) 82, 1011
Fsp4HI GCNGC 1 cut(s) 294
FspBI CTAG 4 cut(s) 35, 755, 1076, 1229
GlaI GCGC 1 cut(s) 292
GluI GCNGC 1 cut(s) 294
HaeII RGCGCY 1 cut(s) 294
HaeIII GGCC 1 cut(s) 1233
HapII CCGG 6 cut(s) 488, 533, 649, 1017, 1147, 1201
HhaI GCGC 1 cut(s) 293
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 8 cut(s) 23, 259, 340, 349, 584, 689, 770, 952
Hin6I GCGC 1 cut(s) 291
HinP1I GCGC 1 cut(s) 291
HincII GTYRAC 1 cut(s) 1152
HindII GTYRAC 1 cut(s) 1152
HindIII AAGCTT 1 cut(s) 667
HinfI GANTC 5 cut(s) 199, 786, 957, 1037, 1252
HpaI GTTAAC 1 cut(s) 1152
HpaII CCGG 6 cut(s) 488, 533, 649, 1017, 1147, 1201
HphI GGTGA 2 cut(s) 60, 817
Hpy166II GTNNAC 3 cut(s) 472, 964, 1152
Hpy188I TCNGA 4 cut(s) 133, 403, 562, 1297
Hpy188III TCNNGA 8 cut(s) 20, 356, 434, 767, 797, 1349, 1361, 1380
Hpy8I GTNNAC 3 cut(s) 472, 964, 1152
HpyAV CCTTC 2 cut(s) 362, 485
HpyCH4III ACNGT 1 cut(s) 192
HpyCH4IV ACGT 5 cut(s) 186, 514, 721, 900, 1289
HpyF10VI GCNNNNNNNGC 2 cut(s) 86, 880
HpyF3I CTNAG 6 cut(s) 26, 549, 670, 1041, 1065, 1332
HpySE526I ACGT 5 cut(s) 186, 514, 721, 900, 1289
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 8 cut(s) 23, 259, 340, 349, 584, 689, 770, 952
HspAI GCGC 1 cut(s) 291
KasI GGCGCC 1 cut(s) 290
Ksp22I TGATCA 1 cut(s) 586
KspAI GTTAAC 1 cut(s) 1152
LguI GCTCTTC 1 cut(s) 1131
LmnI GCTCC 3 cut(s) 77, 714, 1006
LweI GCATC 6 cut(s) 163, 218, 630, 646, 1182, 1269
MaeI CTAG 4 cut(s) 35, 755, 1076, 1229
MaeII ACGT 5 cut(s) 186, 514, 721, 900, 1289
MaeIII GTNAC 2 cut(s) 458, 722
MfeI CAATTG 1 cut(s) 884
MflI RGATCY 4 cut(s) 251, 328, 1105, 1345
MhlI GDGCHC 2 cut(s) 82, 1011
Mly113I GGCGCC 1 cut(s) 291
MlyI GAGTC 2 cut(s) 1046, 1246
Mph1103I ATGCAT 2 cut(s) 639, 1175
MroXI GAANNNNTTC 2 cut(s) 834, 1291
MseI TTAA 3 cut(s) 95, 284, 1151
MslI CAYNNNNRTG 1 cut(s) 1239
MspA1I CMGCKG 1 cut(s) 548
MspI CCGG 6 cut(s) 488, 533, 649, 1017, 1147, 1201
MspR9I CCNGG 3 cut(s) 476, 1201, 1211
MunI CAATTG 1 cut(s) 884
Mva1269I GAATGC 2 cut(s) 639, 1356
MvaI CCWGG 2 cut(s) 476, 1211
MwoI GCNNNNNNNGC 2 cut(s) 86, 880
NarI GGCGCC 1 cut(s) 291
NciI CCSGG 1 cut(s) 1201
NcoI CCATGG 1 cut(s) 685
NlaIII CATG 8 cut(s) 23, 259, 340, 349, 584, 689, 770, 952
NlaIV GGNNCC 3 cut(s) 79, 292, 1107
NsiI ATGCAT 2 cut(s) 639, 1175
PagI TCATGA 2 cut(s) 19, 766
PciSI GCTCTTC 1 cut(s) 1131
PcsI WCGNNNNNNNCGW 2 cut(s) 363, 1242
PctI GAATGC 2 cut(s) 639, 1356
PdmI GAANNNNTTC 2 cut(s) 834, 1291
PfeI GAWTC 3 cut(s) 199, 786, 957
PflMI CCANNNNNTGG 3 cut(s) 287, 1115, 1216
PkrI GCNGC 1 cut(s) 295
PleI GAGTC 2 cut(s) 1045, 1246
PluTI GGCGCC 1 cut(s) 294
PpsI GAGTC 2 cut(s) 1045, 1246
Psp124BI GAGCTC 1 cut(s) 1011
Psp1406I AACGTT 1 cut(s) 514
Psp6I CCWGG 2 cut(s) 474, 1209
PspGI CCWGG 2 cut(s) 474, 1209
PspN4I GGNNCC 3 cut(s) 79, 292, 1107
PspPI GGNCC 2 cut(s) 349, 689
PsuI RGATCY 4 cut(s) 251, 328, 1105, 1345
PvuII CAGCTG 1 cut(s) 548
RsaI GTAC 3 cut(s) 189, 929, 1337
RsaNI GTAC 3 cut(s) 188, 928, 1336
RseI CAYNNNNRTG 1 cut(s) 1239
SacI GAGCTC 1 cut(s) 1011
SapI GCTCTTC 1 cut(s) 1131
SaqAI TTAA 3 cut(s) 95, 284, 1151
SatI GCNGC 1 cut(s) 294
Sau96I GGNCC 2 cut(s) 349, 689
ScaI AGTACT 1 cut(s) 1337
SchI GAGTC 2 cut(s) 1046, 1246
ScrFI CCNGG 3 cut(s) 476, 1201, 1211
SduI GDGCHC 2 cut(s) 82, 1011
SfaNI GCATC 6 cut(s) 163, 218, 630, 646, 1182, 1269
SfoI GGCGCC 1 cut(s) 292
SinI GGWCC 2 cut(s) 349, 689
SmiMI CAYNNNNRTG 1 cut(s) 1239
SpeI ACTAGT 1 cut(s) 754
SsiI CCGC 4 cut(s) 117, 294, 456, 842
SspDI GGCGCC 1 cut(s) 290
SspI AATATT 2 cut(s) 817, 944
SspMI CTAG 4 cut(s) 35, 755, 1076, 1229
SstI GAGCTC 1 cut(s) 1011
StyD4I CCNGG 3 cut(s) 474, 1199, 1209
StyI CCWWGG 1 cut(s) 685
TaaI ACNGT 1 cut(s) 192
TaiI ACGT 5 cut(s) 189, 517, 724, 903, 1292
TaqI TCGA 7 cut(s) 84, 162, 408, 624, 796, 1176, 1360
TatI WGTACW 1 cut(s) 1335
TauI GCSGC 1 cut(s) 296
TfiI GAWTC 3 cut(s) 199, 786, 957
Tru1I TTAA 3 cut(s) 95, 284, 1151
Tru9I TTAA 3 cut(s) 95, 284, 1151
TscAI CASTG 2 cut(s) 197, 604
TspDTI ATGAA 9 cut(s) 17, 111, 117, 272, 353, 598, 755, 782, 937
TspGWI ACGGA 1 cut(s) 969
TspRI CASTG 2 cut(s) 197, 604
Van91I CCANNNNNTGG 3 cut(s) 287, 1115, 1216
VpaK11BI GGWCC 2 cut(s) 349, 689
XapI RAATTY 5 cut(s) 4, 227, 480, 605, 908
XcmI CCANNNNNNNNNTGG 1 cut(s) 1336
XmiI GTMKAC 1 cut(s) 471
XmnI GAANNNNTTC 2 cut(s) 834, 1291
XspI CTAG 4 cut(s) 35, 755, 1076, 1229
ZrmI AGTACT 1 cut(s) 1337
Zsp2I ATGCAT 2 cut(s) 639, 1175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.