MuDR family transposase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05850 |
| fragaria_vesca | FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 |
| malus_domestica | MD04G1186800.v1.1 MD12G1200300.v1.1 |
| prunus_persica | Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 |
| pyrus_communis | pycom04g16490 |
| rosa_chinensis | RchiOBHm_Chr3g0458421 |
| rosa_laevigata | RLG00000025158 |
| rosa_roxburghii | Rroxscaffold_6G00421080 |
| rosa_rugosa | Rorug03G0027800 Rorug03G0027900 Rorug03G0028000 Rorug03G0028100 Rorug03G0028200 Rorug03G0028300 |
| rosa_samantha | Rh3AG087600 Rh3BG090400 Rh3CG090700 Rh3DG091300 |
| rosa_wichuraiana | Rw3G007440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2033 |
| Acc16I | TGCGCA | 1 cut(s) | 2109 |
| AccI | GTMKAC | 1 cut(s) | 1183 |
| AccII | CGCG | 2 cut(s) | 98, 1445 |
| AclI | AACGTT | 1 cut(s) | 359 |
| AclWI | GGATC | 6 cut(s) | 754, 767, 1030, 1408, 1765, 1789 |
| AcsI | RAATTY | 3 cut(s) | 122, 260, 1834 |
| AcuI | CTGAAG | 5 cut(s) | 387, 513, 839, 1322, 1629 |
| AcyI | GRCGYC | 1 cut(s) | 1734 |
| AdeI | CACNNNGTG | 1 cut(s) | 721 |
| AfaI | GTAC | 2 cut(s) | 1682, 2090 |
| AfeI | AGCGCT | 1 cut(s) | 657 |
| AflIII | ACRYGT | 1 cut(s) | 1443 |
| AgsI | TTSAA | 9 cut(s) | 247, 327, 545, 771, 1019, 1122, 1216, 1489, 2327 |
| AjnI | CCWGG | 1 cut(s) | 2209 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1649, 1681 |
| AleI | CACNNNNGTG | 2 cut(s) | 592, 614 |
| Alw21I | GWGCWC | 2 cut(s) | 1476, 1953 |
| Alw26I | GTCTC | 6 cut(s) | 451, 1097, 1301, 1798, 1934, 2197 |
| AlwI | GGATC | 6 cut(s) | 754, 767, 1030, 1408, 1765, 1789 |
| Ama87I | CYCGRG | 1 cut(s) | 1172 |
| Aor51HI | AGCGCT | 1 cut(s) | 657 |
| AoxI | GGCC | 3 cut(s) | 1597, 1653, 2216 |
| ApeKI | GCWGC | 6 cut(s) | 1012, 1244, 1544, 1980, 2260, 2263 |
| ApoI | RAATTY | 3 cut(s) | 122, 260, 1834 |
| AseI | ATTAAT | 2 cut(s) | 513, 846 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 372, 426, 1275 |
| AspLEI | GCGC | 3 cut(s) | 658, 1885, 2110 |
| AspS9I | GGNCC | 4 cut(s) | 416, 1233, 1493, 1653 |
| AsuC2I | CCSGG | 3 cut(s) | 200, 380, 1086 |
| AsuHPI | GGTGA | 4 cut(s) | 161, 1121, 1596, 2006 |
| AsuII | TTCGAA | 1 cut(s) | 2069 |
| AsuNHI | GCTAGC | 2 cut(s) | 338, 878 |
| AvaI | CYCGRG | 1 cut(s) | 1172 |
| AvaII | GGWCC | 3 cut(s) | 416, 1233, 1493 |
| BamHI | GGATCC | 1 cut(s) | 759 |
| BanII | GRGCYC | 2 cut(s) | 1476, 1953 |
| BauI | CACGAG | 1 cut(s) | 1952 |
| Bbv12I | GWGCWC | 2 cut(s) | 1476, 1953 |
| BbvI | GCAGC | 6 cut(s) | 1024, 1231, 1556, 1967, 2250, 2272 |
| BccI | CCATC | 4 cut(s) | 440, 526, 1253, 1912 |
| BceAI | ACGGC | 1 cut(s) | 1993 |
| BciT130I | CCWGG | 1 cut(s) | 2211 |
| BclI | TGATCA | 2 cut(s) | 255, 1645 |
| BcnI | CCSGG | 3 cut(s) | 200, 380, 1086 |
| BcoDI | GTCTC | 6 cut(s) | 451, 1097, 1301, 1798, 1934, 2197 |
| BfaI | CTAG | 5 cut(s) | 339, 879, 1677, 1862, 2332 |
| BfmI | CTRYAG | 4 cut(s) | 1403, 1542, 1975, 2092 |
| BfoI | RGCGCY | 1 cut(s) | 659 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2215 |
| BglII | AGATCT | 1 cut(s) | 1346 |
| BisI | GCNGC | 9 cut(s) | 85, 1013, 1245, 1545, 1981, 2219, 2258, 2261, 2264 |
| BlsI | GCNGC | 9 cut(s) | 86, 1014, 1246, 1546, 1982, 2220, 2259, 2262, 2265 |
| Bme1390I | CCNGG | 4 cut(s) | 200, 380, 1086, 2211 |
| Bme18I | GGWCC | 3 cut(s) | 416, 1233, 1493 |
| BmeT110I | CYCGRG | 1 cut(s) | 1172 |
| BmgT120I | GGNCC | 4 cut(s) | 416, 1233, 1493, 1653 |
| BmiI | GGNNCC | 5 cut(s) | 384, 417, 761, 1234, 2127 |
| BmrFI | CCNGG | 4 cut(s) | 200, 380, 1086, 2211 |
| BmrI | ACTGGG | 1 cut(s) | 1330 |
| BmsI | GCATC | 3 cut(s) | 79, 487, 1291 |
| BmtI | GCTAGC | 2 cut(s) | 342, 882 |
| BmuI | ACTGGG | 1 cut(s) | 1330 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 555, 587 |
| Bpu14I | TTCGAA | 1 cut(s) | 2069 |
| BpuMI | CCSGG | 3 cut(s) | 200, 380, 1086 |
| Bsa29I | ATCGAT | 2 cut(s) | 536, 1412 |
| BsaAI | YACGTR | 1 cut(s) | 1897 |
| BsaBI | GATNNNNATC | 1 cut(s) | 291 |
| BsaHI | GRCGYC | 1 cut(s) | 1734 |
| BsaI | GGTCTC | 1 cut(s) | 2197 |
| BsaJI | CCNNGG | 8 cut(s) | 378, 752, 1155, 1669, 1774, 1848, 1933, 2210 |
| BsaWI | WCCGGW | 1 cut(s) | 2122 |
| Bse1I | ACTGG | 1 cut(s) | 1325 |
| Bse3DI | GCAATG | 1 cut(s) | 2273 |
| Bse8I | GATNNNNATC | 1 cut(s) | 291 |
| BseBI | CCWGG | 1 cut(s) | 2211 |
| BseCI | ATCGAT | 2 cut(s) | 536, 1412 |
| BseDI | CCNNGG | 8 cut(s) | 378, 752, 1155, 1669, 1774, 1848, 1933, 2210 |
| BseGI | GGATG | 4 cut(s) | 258, 518, 1264, 1318 |
| BseJI | GATNNNNATC | 1 cut(s) | 291 |
| BseMI | GCAATG | 1 cut(s) | 2273 |
| BseMII | CTCAG | 7 cut(s) | 153, 456, 462, 800, 1334, 1716, 1956 |
| BseNI | ACTGG | 1 cut(s) | 1325 |
| BseRI | GAGGAG | 1 cut(s) | 444 |
| BseXI | GCAGC | 6 cut(s) | 1024, 1231, 1556, 1967, 2250, 2272 |
| BseYI | CCCAGC | 2 cut(s) | 870, 1722 |
| Bsh1236I | CGCG | 2 cut(s) | 98, 1445 |
| BshFI | GGCC | 3 cut(s) | 1599, 1655, 2218 |
| BshVI | ATCGAT | 2 cut(s) | 536, 1412 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1476, 1953 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1172 |
| BsiSI | CCGG | 4 cut(s) | 200, 380, 1085, 2123 |
| BslFI | GGGAC | 5 cut(s) | 429, 533, 1246, 1277, 2298 |
| BsmAI | GTCTC | 6 cut(s) | 451, 1097, 1301, 1798, 1934, 2197 |
| BsmBI | CGTCTC | 3 cut(s) | 1301, 1798, 1934 |
| BsmFI | GGGAC | 5 cut(s) | 429, 533, 1246, 1277, 2298 |
| BsmI | GAATGC | 1 cut(s) | 2333 |
| BsnI | GGCC | 3 cut(s) | 1599, 1655, 2218 |
| Bso31I | GGTCTC | 1 cut(s) | 2197 |
| BsoBI | CYCGRG | 1 cut(s) | 1172 |
| Bsp119I | TTCGAA | 1 cut(s) | 2069 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1476, 1953 |
| Bsp19I | CCATGG | 1 cut(s) | 1848 |
| BspANI | GGCC | 3 cut(s) | 1599, 1655, 2218 |
| BspCNI | CTCAG | 7 cut(s) | 152, 455, 461, 799, 1335, 1715, 1957 |
| BspDI | ATCGAT | 2 cut(s) | 536, 1412 |
| BspFNI | CGCG | 2 cut(s) | 98, 1445 |
| BspHI | TCATGA | 3 cut(s) | 265, 480, 1504 |
| BspLI | GGNNCC | 5 cut(s) | 384, 417, 761, 1234, 2127 |
| BspMAI | CTGCAG | 2 cut(s) | 1407, 1546 |
| BspOI | GCTAGC | 2 cut(s) | 342, 882 |
| BspPI | GGATC | 6 cut(s) | 754, 767, 1030, 1408, 1765, 1789 |
| BspQI | GCTCTTC | 1 cut(s) | 417 |
| BspT104I | TTCGAA | 1 cut(s) | 2069 |
| BspTNI | GGTCTC | 1 cut(s) | 2197 |
| BsrDI | GCAATG | 1 cut(s) | 2273 |
| BsrI | ACTGG | 1 cut(s) | 1325 |
| BssECI | CCNNGG | 8 cut(s) | 378, 752, 1155, 1669, 1774, 1848, 1933, 2210 |
| BssNI | GRCGYC | 1 cut(s) | 1734 |
| BssSI | CACGAG | 1 cut(s) | 1952 |
| BssT1I | CCWWGG | 2 cut(s) | 752, 1848 |
| Bst2BI | CACGAG | 1 cut(s) | 1952 |
| Bst2UI | CCWGG | 1 cut(s) | 2211 |
| Bst6I | CTCTTC | 2 cut(s) | 417, 945 |
| BstACI | GRCGYC | 1 cut(s) | 1734 |
| BstBAI | YACGTR | 1 cut(s) | 1897 |
| BstBI | TTCGAA | 1 cut(s) | 2069 |
| BstC8I | GCNNGC | 5 cut(s) | 336, 340, 880, 1640, 2238 |
| BstDEI | CTNAG | 8 cut(s) | 139, 442, 448, 786, 1343, 1702, 1877, 1965 |
| BstDSI | CCRYGG | 4 cut(s) | 1669, 1774, 1848, 1933 |
| BstF5I | GGATG | 4 cut(s) | 258, 518, 1264, 1318 |
| BstFNI | CGCG | 2 cut(s) | 98, 1445 |
| BstH2I | RGCGCY | 1 cut(s) | 659 |
| BstHHI | GCGC | 3 cut(s) | 658, 1885, 2110 |
| BstMAI | GTCTC | 6 cut(s) | 451, 1097, 1301, 1798, 1934, 2197 |
| BstNI | CCWGG | 1 cut(s) | 2211 |
| BstNSI | RCATGY | 2 cut(s) | 334, 1583 |
| BstSCI | CCNGG | 4 cut(s) | 198, 378, 1084, 2209 |
| BstSFI | CTRYAG | 4 cut(s) | 1403, 1542, 1975, 2092 |
| BstUI | CGCG | 2 cut(s) | 98, 1445 |
| BstV1I | GCAGC | 6 cut(s) | 1024, 1231, 1556, 1967, 2250, 2272 |
| BstX2I | RGATCY | 3 cut(s) | 759, 1022, 1346 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1934 |
| BstYI | RGATCY | 3 cut(s) | 759, 1022, 1346 |
| Bsu15I | ATCGAT | 2 cut(s) | 536, 1412 |
| BsuRI | GGCC | 3 cut(s) | 1599, 1655, 2218 |
| BsuTUI | ATCGAT | 2 cut(s) | 536, 1412 |
| BtgI | CCRYGG | 4 cut(s) | 1669, 1774, 1848, 1933 |
| BtgZI | GCGATG | 2 cut(s) | 102, 180 |
| BtsCI | GGATG | 4 cut(s) | 258, 518, 1264, 1318 |
| BtsI | GCAGTG | 4 cut(s) | 279, 599, 1299, 2181 |
| BtsIMutI | CAGTG | 4 cut(s) | 279, 599, 1299, 2181 |
| Cac8I | GCNNGC | 5 cut(s) | 336, 340, 880, 1640, 2238 |
| CciI | TCATGA | 3 cut(s) | 265, 480, 1504 |
| CfoI | GCGC | 3 cut(s) | 658, 1885, 2110 |
| Cfr13I | GGNCC | 4 cut(s) | 416, 1233, 1493, 1653 |
| ClaI | ATCGAT | 2 cut(s) | 536, 1412 |
| CseI | GACGC | 1 cut(s) | 1742 |
| Csp6I | GTAC | 2 cut(s) | 1681, 2089 |
| CviQI | GTAC | 2 cut(s) | 1681, 2089 |
| DdeI | CTNAG | 8 cut(s) | 139, 442, 448, 786, 1343, 1702, 1877, 1965 |
| DraI | TTTAAA | 1 cut(s) | 631 |
| DraIII | CACNNNGTG | 1 cut(s) | 721 |
| Eam1104I | CTCTTC | 2 cut(s) | 417, 945 |
| EarI | CTCTTC | 2 cut(s) | 417, 945 |
| Ecl136II | GAGCTC | 2 cut(s) | 1474, 1951 |
| Eco130I | CCWWGG | 2 cut(s) | 752, 1848 |
| Eco147I | AGGCCT | 1 cut(s) | 1599 |
| Eco24I | GRGCYC | 2 cut(s) | 1476, 1953 |
| Eco31I | GGTCTC | 1 cut(s) | 2197 |
| Eco47I | GGWCC | 3 cut(s) | 416, 1233, 1493 |
| Eco47III | AGCGCT | 1 cut(s) | 657 |
| Eco53kI | GAGCTC | 2 cut(s) | 1474, 1951 |
| Eco57I | CTGAAG | 5 cut(s) | 387, 513, 839, 1322, 1629 |
| Eco88I | CYCGRG | 1 cut(s) | 1172 |
| EcoICRI | GAGCTC | 2 cut(s) | 1474, 1951 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1233 |
| EcoRII | CCWGG | 1 cut(s) | 2209 |
| EcoT14I | CCWWGG | 2 cut(s) | 752, 1848 |
| EcoT38I | GRGCYC | 2 cut(s) | 1476, 1953 |
| ErhI | CCWWGG | 2 cut(s) | 752, 1848 |
| Esp3I | CGTCTC | 3 cut(s) | 1301, 1798, 1934 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 2304 |
| FaqI | GGGAC | 5 cut(s) | 429, 533, 1246, 1277, 2298 |
| FauI | CCCGC | 3 cut(s) | 56, 466, 829 |
| FbaI | TGATCA | 2 cut(s) | 255, 1645 |
| FblI | GTMKAC | 1 cut(s) | 1183 |
| Fnu4HI | GCNGC | 9 cut(s) | 85, 1013, 1245, 1545, 1981, 2219, 2258, 2261, 2264 |
| FokI | GGATG | 4 cut(s) | 265, 505, 1271, 1325 |
| FriOI | GRGCYC | 2 cut(s) | 1476, 1953 |
| Fsp4HI | GCNGC | 9 cut(s) | 85, 1013, 1245, 1545, 1981, 2219, 2258, 2261, 2264 |
| FspBI | CTAG | 5 cut(s) | 339, 879, 1677, 1862, 2332 |
| FspI | TGCGCA | 1 cut(s) | 2109 |
| GlaI | GCGC | 3 cut(s) | 657, 1884, 2109 |
| GluI | GCNGC | 9 cut(s) | 85, 1013, 1245, 1545, 1981, 2219, 2258, 2261, 2264 |
| GsaI | CCCAGC | 2 cut(s) | 874, 1726 |
| HaeII | RGCGCY | 1 cut(s) | 659 |
| HaeIII | GGCC | 3 cut(s) | 1599, 1655, 2218 |
| HapII | CCGG | 4 cut(s) | 200, 380, 1085, 2123 |
| HgaI | GACGC | 1 cut(s) | 1742 |
| HhaI | GCGC | 3 cut(s) | 658, 1885, 2110 |
| Hin1I | GRCGYC | 1 cut(s) | 1734 |
| Hin6I | GCGC | 3 cut(s) | 656, 1883, 2108 |
| HinP1I | GCGC | 3 cut(s) | 656, 1883, 2108 |
| HincII | GTYRAC | 6 cut(s) | 623, 1184, 1528, 1998, 2100, 2304 |
| HindII | GTYRAC | 6 cut(s) | 623, 1184, 1528, 1998, 2100, 2304 |
| HindIII | AAGCTT | 1 cut(s) | 1611 |
| HpaI | GTTAAC | 1 cut(s) | 1998 |
| HpaII | CCGG | 4 cut(s) | 200, 380, 1085, 2123 |
| HphI | GGTGA | 4 cut(s) | 161, 1121, 1596, 2006 |
| Hpy188I | TCNGA | 7 cut(s) | 142, 367, 523, 558, 816, 858, 1732 |
| Hpy99I | CGWCG | 2 cut(s) | 1271, 1736 |
| HpyAV | CCTTC | 5 cut(s) | 737, 824, 1105, 1861, 2132 |
| HpyCH4IV | ACGT | 5 cut(s) | 359, 1896, 1943, 2047, 2102 |
| HpyF3I | CTNAG | 8 cut(s) | 139, 442, 448, 786, 1343, 1702, 1877, 1965 |
| HpySE526I | ACGT | 5 cut(s) | 359, 1896, 1943, 2047, 2102 |
| Hsp92I | GRCGYC | 1 cut(s) | 1734 |
| HspAI | GCGC | 3 cut(s) | 656, 1883, 2108 |
| Ksp22I | TGATCA | 2 cut(s) | 255, 1645 |
| KspAI | GTTAAC | 1 cut(s) | 1998 |
| LguI | GCTCTTC | 1 cut(s) | 417 |
| LmnI | GCTCC | 2 cut(s) | 457, 1558 |
| Lsp1109I | GCAGC | 6 cut(s) | 1024, 1231, 1556, 1967, 2250, 2272 |
| LweI | GCATC | 3 cut(s) | 79, 487, 1291 |
| MaeI | CTAG | 5 cut(s) | 339, 879, 1677, 1862, 2332 |
| MaeII | ACGT | 5 cut(s) | 359, 1896, 1943, 2047, 2102 |
| MaeIII | GTNAC | 8 cut(s) | 463, 721, 1037, 1970, 2012, 2176, 2182, 2291 |
| MflI | RGATCY | 3 cut(s) | 759, 1022, 1346 |
| MhlI | GDGCHC | 2 cut(s) | 1476, 1953 |
| MluCI | AATT | 9 cut(s) | 122, 144, 160, 260, 524, 843, 970, 999, 1834 |
| MluI | ACGCGT | 1 cut(s) | 1443 |
| MlyI | GAGTC | 2 cut(s) | 1834, 1882 |
| MmeI | TCCRAC | 3 cut(s) | 300, 839, 1755 |
| MroXI | GAANNNNTTC | 3 cut(s) | 372, 426, 1275 |
| MseI | TTAA | 9 cut(s) | 159, 513, 630, 729, 801, 846, 888, 1520, 1997 |
| MslI | CAYNNNNRTG | 3 cut(s) | 592, 614, 825 |
| MspA1I | CMGCKG | 6 cut(s) | 461, 790, 967, 1054, 1342, 2263 |
| MspI | CCGG | 4 cut(s) | 200, 380, 1085, 2123 |
| MspR9I | CCNGG | 4 cut(s) | 200, 380, 1086, 2211 |
| Mva1269I | GAATGC | 1 cut(s) | 2333 |
| MvaI | CCWGG | 1 cut(s) | 2211 |
| MvnI | CGCG | 2 cut(s) | 98, 1445 |
| NciI | CCSGG | 3 cut(s) | 200, 380, 1086 |
| NcoI | CCATGG | 1 cut(s) | 1848 |
| NheI | GCTAGC | 2 cut(s) | 338, 878 |
| NlaIV | GGNNCC | 5 cut(s) | 384, 417, 761, 1234, 2127 |
| NmuCI | GTSAC | 6 cut(s) | 463, 721, 1970, 2012, 2176, 2291 |
| NsbI | TGCGCA | 1 cut(s) | 2109 |
| NspI | RCATGY | 2 cut(s) | 334, 1583 |
| NspV | TTCGAA | 1 cut(s) | 2069 |
| OliI | CACNNNNGTG | 2 cut(s) | 592, 614 |
| PaeR7I | CTCGAG | 1 cut(s) | 1172 |
| PagI | TCATGA | 3 cut(s) | 265, 480, 1504 |
| PceI | AGGCCT | 1 cut(s) | 1599 |
| PciSI | GCTCTTC | 1 cut(s) | 417 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1442 |
| PctI | GAATGC | 1 cut(s) | 2333 |
| PdmI | GAANNNNTTC | 3 cut(s) | 372, 426, 1275 |
| PfeI | GAWTC | 9 cut(s) | 373, 553, 690, 811, 961, 1118, 1399, 1409, 1565 |
| PflFI | GACNNNGTC | 2 cut(s) | 932, 2289 |
| PfoI | TCCNGGA | 1 cut(s) | 198 |
| PkrI | GCNGC | 9 cut(s) | 86, 1014, 1246, 1546, 1982, 2220, 2259, 2262, 2265 |
| PleI | GAGTC | 2 cut(s) | 1834, 1881 |
| PpsI | GAGTC | 2 cut(s) | 1834, 1881 |
| Ppu21I | YACGTR | 1 cut(s) | 1897 |
| PpuMI | RGGWCCY | 1 cut(s) | 1233 |
| PshBI | ATTAAT | 2 cut(s) | 513, 846 |
| PsiI | TTATAA | 1 cut(s) | 2033 |
| Psp124BI | GAGCTC | 2 cut(s) | 1476, 1953 |
| Psp1406I | AACGTT | 1 cut(s) | 359 |
| Psp5II | RGGWCCY | 1 cut(s) | 1233 |
| Psp6I | CCWGG | 1 cut(s) | 2209 |
| PspFI | CCCAGC | 2 cut(s) | 870, 1722 |
| PspGI | CCWGG | 1 cut(s) | 2209 |
| PspN4I | GGNNCC | 5 cut(s) | 384, 417, 761, 1234, 2127 |
| PspPI | GGNCC | 4 cut(s) | 416, 1233, 1493, 1653 |
| PspPPI | RGGWCCY | 1 cut(s) | 1233 |
| PstI | CTGCAG | 2 cut(s) | 1407, 1546 |
| PsuI | RGATCY | 3 cut(s) | 759, 1022, 1346 |
| PsyI | GACNNNGTC | 2 cut(s) | 932, 2289 |
| PvuII | CAGCTG | 4 cut(s) | 790, 967, 1342, 2263 |
| RsaI | GTAC | 2 cut(s) | 1682, 2090 |
| RsaNI | GTAC | 2 cut(s) | 1681, 2089 |
| RseI | CAYNNNNRTG | 3 cut(s) | 592, 614, 825 |
| SacI | GAGCTC | 2 cut(s) | 1476, 1953 |
| SalI | GTCGAC | 1 cut(s) | 1182 |
| SapI | GCTCTTC | 1 cut(s) | 417 |
| SaqAI | TTAA | 9 cut(s) | 159, 513, 630, 729, 801, 846, 888, 1520, 1997 |
| SatI | GCNGC | 9 cut(s) | 85, 1013, 1245, 1545, 1981, 2219, 2258, 2261, 2264 |
| Sau96I | GGNCC | 4 cut(s) | 416, 1233, 1493, 1653 |
| SchI | GAGTC | 2 cut(s) | 1834, 1882 |
| ScrFI | CCNGG | 4 cut(s) | 200, 380, 1086, 2211 |
| SduI | GDGCHC | 2 cut(s) | 1476, 1953 |
| SfaNI | GCATC | 3 cut(s) | 79, 487, 1291 |
| SfcI | CTRYAG | 4 cut(s) | 1403, 1542, 1975, 2092 |
| Sfr274I | CTCGAG | 1 cut(s) | 1172 |
| SfuI | TTCGAA | 1 cut(s) | 2069 |
| SinI | GGWCC | 3 cut(s) | 416, 1233, 1493 |
| SlaI | CTCGAG | 1 cut(s) | 1172 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 592, 614, 825 |
| SmlI | CTYRAG | 1 cut(s) | 1172 |
| SmoI | CTYRAG | 1 cut(s) | 1172 |
| Sse9I | AATT | 9 cut(s) | 122, 144, 160, 260, 524, 843, 970, 999, 1834 |
| SseBI | AGGCCT | 1 cut(s) | 1599 |
| SspI | AATATT | 1 cut(s) | 2075 |
| SspMI | CTAG | 5 cut(s) | 339, 879, 1677, 1862, 2332 |
| SstI | GAGCTC | 2 cut(s) | 1476, 1953 |
| StuI | AGGCCT | 1 cut(s) | 1599 |
| StyD4I | CCNGG | 4 cut(s) | 198, 378, 1084, 2209 |
| StyI | CCWWGG | 2 cut(s) | 752, 1848 |
| TaiI | ACGT | 5 cut(s) | 362, 1899, 1946, 2050, 2105 |
| TasI | AATT | 9 cut(s) | 122, 144, 160, 260, 524, 843, 970, 999, 1834 |
| TauI | GCSGC | 3 cut(s) | 87, 2221, 2260 |
| TfiI | GAWTC | 9 cut(s) | 373, 553, 690, 811, 961, 1118, 1399, 1409, 1565 |
| Tru1I | TTAA | 9 cut(s) | 159, 513, 630, 729, 801, 846, 888, 1520, 1997 |
| Tru9I | TTAA | 9 cut(s) | 159, 513, 630, 729, 801, 846, 888, 1520, 1997 |
| TscAI | CASTG | 4 cut(s) | 286, 599, 1299, 2181 |
| TseFI | GTSAC | 6 cut(s) | 463, 721, 1970, 2012, 2176, 2291 |
| TseI | GCWGC | 6 cut(s) | 1012, 1244, 1544, 1980, 2260, 2263 |
| Tsp45I | GTSAC | 6 cut(s) | 463, 721, 1970, 2012, 2176, 2291 |
| TspDTI | ATGAA | 8 cut(s) | 115, 134, 254, 497, 824, 1151, 1557, 2267 |
| TspGWI | ACGGA | 9 cut(s) | 265, 676, 1325, 1658, 1763, 1822, 1922, 2043, 2058 |
| TspRI | CASTG | 4 cut(s) | 286, 599, 1299, 2181 |
| Tth111I | GACNNNGTC | 2 cut(s) | 932, 2289 |
| VpaK11BI | GGWCC | 3 cut(s) | 416, 1233, 1493 |
| VspI | ATTAAT | 2 cut(s) | 513, 846 |
| XapI | RAATTY | 3 cut(s) | 122, 260, 1834 |
| XceI | RCATGY | 2 cut(s) | 334, 1583 |
| XhoI | CTCGAG | 1 cut(s) | 1172 |
| XmiI | GTMKAC | 1 cut(s) | 1183 |
| XmnI | GAANNNNTTC | 3 cut(s) | 372, 426, 1275 |
| XspI | CTAG | 5 cut(s) | 339, 879, 1677, 1862, 2332 |