Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0004893

Physical Location & Seq

Genomic Coordinates Forward (+)

27761733 .. 27765784

Gene Structure 4052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1186800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGAAGTTTGATGAGTTTAAATTGGAGGTCACAGAAATGTTTGGTTGCAGCTACAATAACATGGTCATCAAGTACTTCCTCCCTGGCAACAAGAAGACCCTGATTACTGTTTCCAATGACAAGGATCTCCAGCGCATGATCAAATTCCATGGTGATTTTGCAACCATTGATATTTATGTCATGGAGGAAGTAGCTCCTCCTGATGTCTCGAACATGCCTCCCAGTAGGTCGAGCAGAACAACTCTGTCAGAAACTGTGGTTCCAGTTGATGCATCTCTTGATGTCGTGGACTTTGTGGGTGATACCACTCAGCCTGATATCCCACTTGATGCTTCTCTTGATGTTGTCGATGGTGCCAGCCCTATTGATGCACATATTGATATACCCACCGAAATATCACCCATTTTTCCTCTTGTTGGCCCTAGTGGTGAGAAGCATGCTAAAGGTGCACACCAGTGGCAGAATGCTATTACGGGTGTGGGCCAAAGATTCAGCAGCGTTCATGAATTTCGTGAATCATTGCGCAAATATGCCATTGCGCATCAGTTCGCCTTTAGGTATAAGAAGAATGATAGTCATCGTGTGACTGTGAAGTGCAAGGCTGAAGGCTGCCCTTGGAGAATTCATGCATCAAGGTTGTCGACAACTCAGTTAATATGTATCAAGAAAATGAATCCAACACATTCCTGTGAAGGTGCTGTTGCAACTACAGGGCATCAGGCGACGAGGAGTTGGGTGGCCAGTATTATCAAGGAGAAGTTAAAATATATGCCCAACTATAAGCCCAAGGATATTGTGAACGATATCAAGCAGGAATATGGTATACAGCTAAACTACTTCCAGGCCTGGCGTGGGAAAGAAATAGCAAAGGAGCAGCTTCAGGGTTCGTACAAAGAGGCATATAATCAATTACCATTTTTCTGTGACAGGATAATGGAGACAAACCCTGGTAGTCTTGCTACTTTTACCACCAAGGAAGACTCCAGTTTCCATCGCCTCTTTGTCGCATTCCATGCCTCATTGTATGGTTTCCAGCAAGGTTGCAGGCCTCTCCTTTTCCTGGATAGCATTCCCTTAAAATCAAAATATCAAGGCACATTGTTGGCTGCAACAGCTGCTGACGGGGATGATGGGGTATTCCCTGTTGCTTTCACTGTGGTGGATGCAGAAACTGATGATAATTGGCATTGGTTTTTACTACAGTTGAAATCTGCATTGTCAATATCTTGTCCTGTGACATTTGTGGCAGACAGACAGAAGGGATTGAAGGAATCAATTGCGGAAATATTTAAAGACTCATATCATGGCTATTGCCTGCGATATTTGACCGAGCAACTTATCAGGGACTTGAAAGGGCAGTTTTCTCATGAGGTCAAGCGGCTGATGATTGAGGATTTTTATGGTGCTGCTTATGCACATAGGCCTGAAAACTTCCAAAGTTGTCTTGAAAGCATAAAAAGCATCTCATTGGAGGCTTACAATTGGATCATACAAAGTGAGCCCCAGAAGTGGGCGAATTCATTCTTTCAAGGTGCTAGATATAACCATATGACATCCAACTTTGGTGAGCTGTTCTATAGTTGGGCATCAGATGCACACGAGTTACCAATAACACAGATGGTTGATGTGATCAGGGGTAAGATTATGGAGTTGATCTACACAAGAAGGGAAGGATCTAATGAATGGTTGACAAGGCTTACTCCAACCATGGAGGAAAAGCTAGAAAAGGAAACTCAGAACATCGGAAACCTCCAAGTGCTATTGTTGACTGGTAGCAGATTTGAGGTTCATGGTGACACCACTGAAGTTGTTGATGTTGATCGCTGGGACTGTAGTTGTAGAGGGTGGCAGATAACTGGTTTACCATGCTGTCATGCAATTGCTGTCATTCGTTGCATGGGCAGGAGCCCATATGATTATTGTTCAAGATACTTTACCACTGAGAGCTATAGATTGACATACTCAGAACCAATATATCCTGTTCCAAATGTAGACATGCCTGTGACGAAGGCTTCTTCTCAAGTACTAGTGACTGTAACGCCTCCACCCACCCGGCGTCCACCAGGCAGGCCTACTACTAAGAAATATGGATCACAAGATATGGCTAAGCGTCAACTCCAGTGCAGCAGATGCAAGGGTCTTGGGCACAACAAGTCCACTTGTAAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBD_Tnp_Mut MULE PB1 SWIM

Protein Analysis

724

Amino Acids

82.13

Weight (kDa)

7.05

Isoelectric Point (pI)

39.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DBD_Tnp_Mut	PF03108	156 - 221	5.2e-31	MuDR family transposase
MULE	PF10551	352 - 443	4.9e-13	MULE transposase domain
SWIM	PF04434	603 - 632	1.2e-09	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004893)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05850
fragaria_vesca	FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441
malus_domestica	MD04G1186800.v1.1 MD12G1200300.v1.1
prunus_persica	Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1
pyrus_communis	pycom04g16490
rosa_chinensis	RchiOBHm_Chr3g0458421
rosa_laevigata	RLG00000025158
rosa_roxburghii	Rroxscaffold_6G00421080
rosa_rugosa	Rorug03G0027800 Rorug03G0027900 Rorug03G0028000 Rorug03G0028100 Rorug03G0028200 Rorug03G0028300
rosa_samantha	Rh3AG087600 Rh3BG090400 Rh3CG090700 Rh3DG091300
rosa_wichuraiana	Rw3G007440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	524, 540
AccB1I	GGYRCC	1 cut(s)	353
AccI	GTMKAC	3 cut(s)	641, 823, 1992
AciI	CCGC	2 cut(s)	1280, 1378
AclWI	GGATC	4 cut(s)	132, 1493, 1681, 2098
AcoI	YGGCCR	1 cut(s)	738
AcsI	RAATTY	4 cut(s)	143, 506, 621, 1516
AcuI	CTGAAG	3 cut(s)	624, 863, 1824
AcyI	GRCGYC	1 cut(s)	2056
AfaI	GTAC	3 cut(s)	74, 890, 2025
AfiI	CCNNNNNNNGG	5 cut(s)	416, 852, 1060, 1509, 1510
AgsI	TTSAA	6 cut(s)	1207, 1267, 1351, 1448, 1529, 1926
AhlI	ACTAGT	1 cut(s)	2026
AjnI	CCWGG	6 cut(s)	82, 840, 845, 946, 1059, 2062
AleI	CACNNNNGTG	2 cut(s)	454, 1157
AluBI	AGCT	8 cut(s)	51, 194, 829, 877, 1115, 1570, 1720, 1947
AluI	AGCT	8 cut(s)	51, 194, 829, 877, 1115, 1570, 1720, 1947
Alw21I	GWGCWC	1 cut(s)	451
Alw26I	GTCTC	2 cut(s)	211, 932
Alw44I	GTGCAC	1 cut(s)	447
AlwI	GGATC	4 cut(s)	132, 1493, 1681, 2098
AlwNI	CAGNNNCTG	3 cut(s)	254, 1118, 1172
AoxI	GGCC	7 cut(s)	418, 481, 738, 843, 1046, 1421, 2069
ApaLI	GTGCAC	1 cut(s)	447
ApeKI	GCWGC	8 cut(s)	48, 495, 609, 874, 1106, 1115, 1406, 2124
ApoI	RAATTY	4 cut(s)	143, 506, 621, 1516
Asp700I	GAANNNNTTC	1 cut(s)	1520
AspLEI	GCGC	3 cut(s)	135, 525, 541
AspS9I	GGNCC	2 cut(s)	419, 481
AsuC2I	CCSGG	1 cut(s)	2053
AsuHPI	GGTGA	6 cut(s)	164, 311, 390, 440, 1577, 1805
BaeGI	GKGCMC	2 cut(s)	451, 2148
BalI	TGGCCA	1 cut(s)	740
BanI	GGYRCC	1 cut(s)	353
BanII	GRGCYC	2 cut(s)	1503, 1910
BauI	CACGAG	1 cut(s)	1598
BbsI	GAAGAC	2 cut(s)	101, 984
Bbv12I	GWGCWC	1 cut(s)	451
BbvI	GCAGC	8 cut(s)	60, 507, 596, 886, 1093, 1102, 1393, 2136
BccI	CCATC	4 cut(s)	344, 999, 1124, 1612
BciT130I	CCWGG	6 cut(s)	84, 842, 847, 948, 1061, 2064
BclI	TGATCA	2 cut(s)	138, 1629
BcnI	CCSGG	1 cut(s)	2053
BcoDI	GTCTC	2 cut(s)	211, 932
BcuI	ACTAGT	1 cut(s)	2026
BfaI	CTAG	4 cut(s)	423, 1536, 1721, 2027
BfmI	CTRYAG	5 cut(s)	708, 1199, 1576, 1831, 1948
BisI	GCNGC	9 cut(s)	49, 496, 610, 875, 1107, 1116, 1379, 1407, 2125
BlpI	GCTNAGC	1 cut(s)	2106
BlsI	GCNGC	9 cut(s)	50, 497, 611, 876, 1108, 1117, 1380, 1408, 2126
BmcAI	AGTACT	2 cut(s)	74, 2025
Bme1390I	CCNGG	7 cut(s)	84, 842, 847, 948, 1061, 2053, 2064
BmgT120I	GGNCC	2 cut(s)	419, 481
BmiI	GGNNCC	3 cut(s)	261, 355, 1907
BmrFI	CCNGG	7 cut(s)	84, 842, 847, 948, 1061, 2053, 2064
BmrI	ACTGGG	1 cut(s)	216
BmuI	ACTGGG	1 cut(s)	216
BpiI	GAAGAC	2 cut(s)	101, 984
BpmI	CTGGAG	3 cut(s)	113, 967, 2102
Bpu1102I	GCTNAGC	1 cut(s)	2106
BpuEI	CTTGAG	1 cut(s)	2004
BpuMI	CCSGG	1 cut(s)	2053
BsaBI	GATNNNNATC	2 cut(s)	576, 1818
BsaHI	GRCGYC	1 cut(s)	2056
BsaJI	CCNNGG	7 cut(s)	82, 148, 614, 786, 946, 972, 1707
Bsc4I	CCNNNNNNNGG	5 cut(s)	416, 852, 1060, 1509, 1510
Bse1I	ACTGG	8 cut(s)	222, 263, 454, 741, 984, 1774, 1861, 2119
Bse3DI	GCAATG	2 cut(s)	518, 534
Bse8I	GATNNNNATC	2 cut(s)	576, 1818
BseBI	CCWGG	6 cut(s)	84, 842, 847, 948, 1061, 2064
BseDI	CCNNGG	7 cut(s)	82, 148, 614, 786, 946, 972, 1707
BseGI	GGATG	3 cut(s)	1132, 1168, 1553
BseJI	GATNNNNATC	2 cut(s)	576, 1818
BseLI	CCNNNNNNNGG	5 cut(s)	416, 852, 1060, 1509, 1510
BseMI	GCAATG	2 cut(s)	518, 534
BseMII	CTCAG	5 cut(s)	323, 662, 1748, 1932, 1977
BseNI	ACTGG	8 cut(s)	222, 263, 454, 741, 984, 1774, 1861, 2119
BseRI	GAGGAG	2 cut(s)	186, 742
BseSI	GKGCMC	2 cut(s)	451, 2148
BseXI	GCAGC	8 cut(s)	60, 507, 596, 886, 1093, 1102, 1393, 2136
BseYI	CCCAGC	1 cut(s)	1824
BsgI	GTGCAG	1 cut(s)	2143
BshFI	GGCC	7 cut(s)	420, 483, 740, 845, 1048, 1423, 2071
BshNI	GGYRCC	1 cut(s)	353
BsiHKAI	GWGCWC	1 cut(s)	451
BsiSI	CCGG	1 cut(s)	2053
BslFI	GGGAC	2 cut(s)	1358, 1841
BslI	CCNNNNNNNGG	5 cut(s)	416, 852, 1060, 1509, 1510
BsmAI	GTCTC	2 cut(s)	211, 932
BsmFI	GGGAC	2 cut(s)	1358, 1841
BsmI	GAATGC	3 cut(s)	469, 1007, 1068
BsnI	GGCC	7 cut(s)	420, 483, 740, 845, 1048, 1423, 2071
Bsp1286I	GDGCHC	4 cut(s)	451, 1503, 1910, 2148
Bsp143I	GATC	8 cut(s)	124, 138, 1485, 1629, 1653, 1673, 1819, 2090
Bsp1720I	GCTNAGC	1 cut(s)	2106
Bsp19I	CCATGG	2 cut(s)	148, 1707
BspACI	CCGC	2 cut(s)	1280, 1378
BspANI	GGCC	7 cut(s)	420, 483, 740, 845, 1048, 1423, 2071
BspCNI	CTCAG	5 cut(s)	322, 661, 1747, 1933, 1976
BspHI	TCATGA	2 cut(s)	502, 1366
BspLI	GGNNCC	3 cut(s)	261, 355, 1907
BspPI	GGATC	4 cut(s)	132, 1493, 1681, 2098
BspT107I	GGYRCC	1 cut(s)	353
BsrDI	GCAATG	2 cut(s)	518, 534
BsrI	ACTGG	8 cut(s)	222, 263, 454, 741, 984, 1774, 1861, 2119
BssECI	CCNNGG	7 cut(s)	82, 148, 614, 786, 946, 972, 1707
BssMI	GATC	8 cut(s)	124, 138, 1485, 1629, 1653, 1673, 1819, 2090
BssNAI	GTATAC	1 cut(s)	824
BssNI	GRCGYC	1 cut(s)	2056
BssSI	CACGAG	1 cut(s)	1598
BssT1I	CCWWGG	5 cut(s)	148, 614, 786, 972, 1707
Bst1107I	GTATAC	1 cut(s)	824
Bst2BI	CACGAG	1 cut(s)	1598
Bst2UI	CCWGG	6 cut(s)	84, 842, 847, 948, 1061, 2064
Bst4CI	ACNGT	7 cut(s)	109, 256, 589, 1156, 1203, 1832, 2035
BstACI	GRCGYC	1 cut(s)	2056
BstAPI	GCANNNNNTGC	4 cut(s)	1013, 1115, 1592, 2130
BstC8I	GCNNGC	5 cut(s)	358, 438, 1046, 1316, 2069
BstDEI	CTNAG	7 cut(s)	309, 648, 1734, 1941, 1963, 2079, 2106
BstDSI	CCRYGG	2 cut(s)	148, 1707
BstF5I	GGATG	3 cut(s)	1132, 1168, 1553
BstHHI	GCGC	3 cut(s)	135, 525, 541
BstKTI	GATC	8 cut(s)	127, 141, 1488, 1632, 1656, 1676, 1822, 2093
BstMAI	GTCTC	2 cut(s)	211, 932
BstMBI	GATC	8 cut(s)	124, 138, 1485, 1629, 1653, 1673, 1819, 2090
BstMWI	GCNNNNNNNGC	8 cut(s)	446, 1013, 1112, 1115, 1412, 1458, 1592, 2130
BstNI	CCWGG	6 cut(s)	84, 842, 847, 948, 1061, 2064
BstNSI	RCATGY	3 cut(s)	217, 440, 1999
BstSCI	CCNGG	7 cut(s)	82, 840, 845, 946, 1059, 2051, 2062
BstSFI	CTRYAG	5 cut(s)	708, 1199, 1576, 1831, 1948
BstSLI	GKGCMC	2 cut(s)	451, 2148
BstV1I	GCAGC	8 cut(s)	60, 507, 596, 886, 1093, 1102, 1393, 2136
BstV2I	GAAGAC	2 cut(s)	101, 984
BstX2I	RGATCY	2 cut(s)	124, 1673
BstYI	RGATCY	2 cut(s)	124, 1673
BstZ17I	GTATAC	1 cut(s)	824
BsuRI	GGCC	7 cut(s)	420, 483, 740, 845, 1048, 1423, 2071
BtgI	CCRYGG	2 cut(s)	148, 1707
BtgZI	GCGATG	1 cut(s)	977
BtsCI	GGATG	3 cut(s)	1132, 1168, 1553
BtsIMutI	CAGTG	5 cut(s)	461, 1152, 1800, 1938, 2126
Cac8I	GCNNGC	5 cut(s)	358, 438, 1046, 1316, 2069
CaiI	CAGNNNCTG	3 cut(s)	254, 1118, 1172
CciI	TCATGA	2 cut(s)	502, 1366
CfoI	GCGC	3 cut(s)	135, 525, 541
Cfr13I	GGNCC	2 cut(s)	419, 481
CseI	GACGC	2 cut(s)	2045, 2099
Csp6I	GTAC	3 cut(s)	73, 889, 2024
CspCI	CAANNNNNGTGG	2 cut(s)	1789, 1824
CviQI	GTAC	3 cut(s)	73, 889, 2024
DdeI	CTNAG	7 cut(s)	309, 648, 1734, 1941, 1963, 2079, 2106
DpnI	GATC	8 cut(s)	126, 140, 1487, 1631, 1655, 1675, 1821, 2092
DpnII	GATC	8 cut(s)	124, 138, 1485, 1629, 1653, 1673, 1819, 2090
DraI	TTTAAA	2 cut(s)	19, 1291
EaeI	YGGCCR	1 cut(s)	738
Eco130I	CCWWGG	5 cut(s)	148, 614, 786, 972, 1707
Eco147I	AGGCCT	4 cut(s)	845, 1048, 1423, 2071
Eco24I	GRGCYC	2 cut(s)	1503, 1910
Eco32I	GATATC	2 cut(s)	319, 805
Eco57I	CTGAAG	3 cut(s)	624, 863, 1824
EcoRI	GAATTC	2 cut(s)	621, 1516
EcoRII	CCWGG	6 cut(s)	82, 840, 845, 946, 1059, 2062
EcoRV	GATATC	2 cut(s)	319, 805
EcoT14I	CCWWGG	5 cut(s)	148, 614, 786, 972, 1707
EcoT22I	ATGCAT	2 cut(s)	274, 631
EcoT38I	GRGCYC	2 cut(s)	1503, 1910
ErhI	CCWWGG	5 cut(s)	148, 614, 786, 972, 1707
FaqI	GGGAC	2 cut(s)	1358, 1841
FauNDI	CATATG	2 cut(s)	1548, 1912
FbaI	TGATCA	2 cut(s)	138, 1629
FblI	GTMKAC	3 cut(s)	641, 823, 1992
Fnu4HI	GCNGC	9 cut(s)	49, 496, 610, 875, 1107, 1116, 1379, 1407, 2125
FokI	GGATG	3 cut(s)	1139, 1175, 1540
FriOI	GRGCYC	2 cut(s)	1503, 1910
Fsp4HI	GCNGC	9 cut(s)	49, 496, 610, 875, 1107, 1116, 1379, 1407, 2125
FspBI	CTAG	4 cut(s)	423, 1536, 1721, 2027
FspI	TGCGCA	2 cut(s)	524, 540
GlaI	GCGC	3 cut(s)	134, 524, 540
GluI	GCNGC	9 cut(s)	49, 496, 610, 875, 1107, 1116, 1379, 1407, 2125
GsaI	CCCAGC	1 cut(s)	1828
GsuI	CTGGAG	3 cut(s)	113, 967, 2102
HaeIII	GGCC	7 cut(s)	420, 483, 740, 845, 1048, 1423, 2071
HapII	CCGG	1 cut(s)	2053
HgaI	GACGC	2 cut(s)	2045, 2099
HhaI	GCGC	3 cut(s)	135, 525, 541
Hin1I	GRCGYC	1 cut(s)	2056
Hin6I	GCGC	3 cut(s)	133, 523, 539
HinP1I	GCGC	3 cut(s)	133, 523, 539
HincII	GTYRAC	4 cut(s)	642, 1689, 1767, 2114
HindII	GTYRAC	4 cut(s)	642, 1689, 1767, 2114
HinfI	GANTC	6 cut(s)	489, 515, 673, 980, 1271, 1295
HpaII	CCGG	1 cut(s)	2053
HphI	GGTGA	6 cut(s)	164, 311, 390, 440, 1577, 1805
Hpy188I	TCNGA	5 cut(s)	250, 1591, 1737, 1745, 1966
Hpy99I	CGWCG	1 cut(s)	727
HpyAV	CCTTC	7 cut(s)	599, 686, 1252, 1261, 1659, 1664, 2002
HpyCH4III	ACNGT	7 cut(s)	109, 256, 589, 1156, 1203, 1832, 2035
HpyF10VI	GCNNNNNNNGC	8 cut(s)	446, 1013, 1112, 1115, 1412, 1458, 1592, 2130
HpyF3I	CTNAG	7 cut(s)	309, 648, 1734, 1941, 1963, 2079, 2106
Hsp92I	GRCGYC	1 cut(s)	2056
HspAI	GCGC	3 cut(s)	133, 523, 539
Ksp22I	TGATCA	2 cut(s)	138, 1629
Kzo9I	GATC	8 cut(s)	124, 138, 1485, 1629, 1653, 1673, 1819, 2090
LmnI	GCTCC	3 cut(s)	199, 871, 1905
Lsp1109I	GCAGC	8 cut(s)	60, 507, 596, 886, 1093, 1102, 1393, 2136
MaeI	CTAG	4 cut(s)	423, 1536, 1721, 2027
MaeIII	GTNAC	9 cut(s)	28, 583, 923, 1234, 1602, 1793, 2002, 2029, 2035
MalI	GATC	8 cut(s)	126, 140, 1487, 1631, 1655, 1675, 1821, 2092
MboI	GATC	8 cut(s)	124, 138, 1485, 1629, 1653, 1673, 1819, 2090
MboII	GAAGA	4 cut(s)	106, 577, 989, 2007
MfeI	CAATTG	3 cut(s)	1275, 1480, 1878
MflI	RGATCY	2 cut(s)	124, 1673
MhlI	GDGCHC	4 cut(s)	451, 1503, 1910, 2148
MlsI	TGGCCA	1 cut(s)	740
MluNI	TGGCCA	1 cut(s)	740
MlyI	GAGTC	2 cut(s)	974, 1289
MmeI	TCCRAC	3 cut(s)	701, 1581, 1727
Mox20I	TGGCCA	1 cut(s)	740
Mph1103I	ATGCAT	2 cut(s)	274, 631
MroXI	GAANNNNTTC	1 cut(s)	1520
MscI	TGGCCA	1 cut(s)	740
MseI	TTAA	5 cut(s)	18, 653, 761, 1076, 1290
MslI	CAYNNNNRTG	5 cut(s)	35, 454, 687, 1157, 2000
Msp20I	TGGCCA	1 cut(s)	740
MspA1I	CMGCKG	1 cut(s)	1115
MspI	CCGG	1 cut(s)	2053
MspR9I	CCNGG	7 cut(s)	84, 842, 847, 948, 1061, 2053, 2064
MunI	CAATTG	3 cut(s)	1275, 1480, 1878
Mva1269I	GAATGC	3 cut(s)	469, 1007, 1068
MvaI	CCWGG	6 cut(s)	84, 842, 847, 948, 1061, 2064
MwoI	GCNNNNNNNGC	8 cut(s)	446, 1013, 1112, 1115, 1412, 1458, 1592, 2130
NciI	CCSGG	1 cut(s)	2053
NcoI	CCATGG	2 cut(s)	148, 1707
NdeI	CATATG	2 cut(s)	1548, 1912
NdeII	GATC	8 cut(s)	124, 138, 1485, 1629, 1653, 1673, 1819, 2090
NlaIV	GGNNCC	3 cut(s)	261, 355, 1907
NmuCI	GTSAC	7 cut(s)	28, 583, 923, 1234, 1793, 2002, 2029
NsbI	TGCGCA	2 cut(s)	524, 540
NsiI	ATGCAT	2 cut(s)	274, 631
NspI	RCATGY	3 cut(s)	217, 440, 1999
OliI	CACNNNNGTG	2 cut(s)	454, 1157
PaeI	GCATGC	1 cut(s)	440
PagI	TCATGA	2 cut(s)	502, 1366
PceI	AGGCCT	4 cut(s)	845, 1048, 1423, 2071
PctI	GAATGC	3 cut(s)	469, 1007, 1068
PdmI	GAANNNNTTC	1 cut(s)	1520
PfeI	GAWTC	4 cut(s)	489, 515, 673, 1271
PfoI	TCCNGGA	1 cut(s)	1059
PkrI	GCNGC	9 cut(s)	50, 497, 611, 876, 1108, 1117, 1380, 1408, 2126
PleI	GAGTC	2 cut(s)	974, 1289
PpsI	GAGTC	2 cut(s)	974, 1289
Psp6I	CCWGG	6 cut(s)	82, 840, 845, 946, 1059, 2062
PspFI	CCCAGC	1 cut(s)	1824
PspGI	CCWGG	6 cut(s)	82, 840, 845, 946, 1059, 2062
PspN4I	GGNNCC	3 cut(s)	261, 355, 1907
PspPI	GGNCC	2 cut(s)	419, 481
PstNI	CAGNNNCTG	3 cut(s)	254, 1118, 1172
PsuI	RGATCY	2 cut(s)	124, 1673
PvuII	CAGCTG	1 cut(s)	1115
RsaI	GTAC	3 cut(s)	74, 890, 2025
RsaNI	GTAC	3 cut(s)	73, 889, 2024
RseI	CAYNNNNRTG	5 cut(s)	35, 454, 687, 1157, 2000
SalI	GTCGAC	1 cut(s)	640
SaqAI	TTAA	5 cut(s)	18, 653, 761, 1076, 1290
SatI	GCNGC	9 cut(s)	49, 496, 610, 875, 1107, 1116, 1379, 1407, 2125
Sau3AI	GATC	8 cut(s)	124, 138, 1485, 1629, 1653, 1673, 1819, 2090
Sau96I	GGNCC	2 cut(s)	419, 481
ScaI	AGTACT	2 cut(s)	74, 2025
SchI	GAGTC	2 cut(s)	974, 1289
ScrFI	CCNGG	7 cut(s)	84, 842, 847, 948, 1061, 2053, 2064
SduI	GDGCHC	4 cut(s)	451, 1503, 1910, 2148
SfcI	CTRYAG	5 cut(s)	708, 1199, 1576, 1831, 1948
SmiMI	CAYNNNNRTG	5 cut(s)	35, 454, 687, 1157, 2000
SmlI	CTYRAG	1 cut(s)	2019
SmoI	CTYRAG	1 cut(s)	2019
SpeI	ACTAGT	1 cut(s)	2026
SphI	GCATGC	1 cut(s)	440
SseBI	AGGCCT	4 cut(s)	845, 1048, 1423, 2071
SsiI	CCGC	2 cut(s)	1280, 1378
SspI	AATATT	1 cut(s)	1287
SspMI	CTAG	4 cut(s)	423, 1536, 1721, 2027
StuI	AGGCCT	4 cut(s)	845, 1048, 1423, 2071
StyD4I	CCNGG	7 cut(s)	82, 840, 845, 946, 1059, 2051, 2062
StyI	CCWWGG	5 cut(s)	148, 614, 786, 972, 1707
TaaI	ACNGT	7 cut(s)	109, 256, 589, 1156, 1203, 1832, 2035
TaqI	TCGA	4 cut(s)	209, 230, 348, 641
TaqII	GACCGA	1 cut(s)	1343
TatI	WGTACW	2 cut(s)	72, 2023
TauI	GCSGC	1 cut(s)	1381
TfiI	GAWTC	4 cut(s)	489, 515, 673, 1271
Tru1I	TTAA	5 cut(s)	18, 653, 761, 1076, 1290
Tru9I	TTAA	5 cut(s)	18, 653, 761, 1076, 1290
TscAI	CASTG	5 cut(s)	461, 1159, 1807, 1945, 2126
TseFI	GTSAC	7 cut(s)	28, 583, 923, 1234, 1793, 2002, 2029
TseI	GCWGC	8 cut(s)	48, 495, 609, 874, 1106, 1115, 1406, 2124
Tsp45I	GTSAC	7 cut(s)	28, 583, 923, 1234, 1793, 2002, 2029
TspDTI	ATGAA	8 cut(s)	17, 491, 519, 614, 686, 1509, 1695, 1778
TspRI	CASTG	5 cut(s)	461, 1159, 1807, 1945, 2126
VneI	GTGCAC	1 cut(s)	447
XapI	RAATTY	4 cut(s)	143, 506, 621, 1516
XceI	RCATGY	3 cut(s)	217, 440, 1999
XcmI	CCANNNNNNNNNTGG	1 cut(s)	848
XmiI	GTMKAC	3 cut(s)	641, 823, 1992
XmnI	GAANNNNTTC	1 cut(s)	1520
XspI	CTAG	4 cut(s)	423, 1536, 1721, 2027
ZrmI	AGTACT	2 cut(s)	74, 2025
Zsp2I	ATGCAT	2 cut(s)	274, 631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.