Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004893

Physical Location & Seq

Genomic Coordinates Reverse (-)

4998737 .. 5003456

Gene Structure 4720 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g08441.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGAGGGGAAGAGAATCATAACGATTTGTCAGTCAGGGGGTGAATTCTTTACTGAGAAGGATGGTACATTGTCATATAGAGGCGGTGACGCTCATGCTATTGACATTGATGAAGGGGTGAAGTTTAATGAGTTCAAAATGGAGGTGTCAGAGATGTTTGGTTGTAACACCAATAACATGTCCATCAAGTACTTCCTCCCTGGGAACAAGAAGACCCTGATTACTGTTTCAAATGACAAGGATCTCATGCGCATGATCAAATTCCATGATGATTTTGCAACAGTCGATATTTATGTCATGGAAGAAACAATCGCACCCGAAGTCTCAAACATGCCTGCCAGTAGGTCAAGCAGAACGACTTTGTCTGAAACTGTGCTTCCAGTTGATGATGTGGCTCTGGATGTTTCGGAGTTTGTTGGTGATACCCCCCAGCCAGATATCCCACTAGATGCCTCTCTTGATGTTCTAGATGATACCAGCCCTATCGATACACATATTGATCTACCCACTGAGATGTCACCCCTTTTCCCTTTTGTTGGCCTCATTGACGAGAAACTTGCTAAGGGTGCACAGCAGTGGCAGAATTCCATTACGGGTGTGGGTCAGAGATTCAATAGCGTTCATGAATTTCGTGAATCATTGCGTAAATATGCCATTGCGCATCAGTTTGCCTTTAGGTATAAGAAGAATGATAGTCATCGTGTGACTGTTAAGTGCAAGGCTGAAGGCTGCCCTTGGAGAATTCATGCATCAAGGTTGTCTACAACTCAGTTAATATGTATCAAGAAGATGAATCCAGCACATACATGTGAAGGGGCTGTTGCTACAACAGGGCATCAGGCAACAAGGAGTTGGGTGGCTAGTATTATTAAGGAGAAGTTAAAATACTTGCCTAATTATAAGCCCAAGGATATCGTCAATGACATCAAGCAAGAATATGGAATTCAGCTGAACTACTTTCAAGCCTGGCGTGGGAAAGAAATAGCGAAGGAGCAGCTTCAGGGTTCATACAAAGACGCATATAATCAGTTACCCCTTTTCTGTGAGAAGATAATGGAGACAAACCCTGGTAGTTTTGCTTTATTTACTACCAAGGAAGATTCGAGTTTCCACCGGCTCTTTGTCTCATTCCATGCCTCATTATCTGGGTTCCAGCAAGGTTGCAGGCCTCTCCTTTTTCTTGATAGCATTCCTCTAAAGTCAAAATATCAAGGCACATTGTTGGCTGCAACTGCTGCAGATGGGGATGATGGGGTTTTCCCTGTTGCTTTCACTGTTGTGGATGCAGAAAGTGATGATAACTGGCATTGGTTTTTACTACAGCTGAAGTCCTCATTTTCAACTTCTTGTCCGATAACATTTGTGGCCGACAGACAGAAGGGGTTAAGGGAATCAATTGCTGAAATATTCAAAGACTCATACCATGGCTATTGCCTGCGATACTTGACTGAGCAACTCATCAGAGACTTGAAAGGGCAGTTTTCTCACGAGGTGAAGAGACTCATGGTTGAGGATTTCTATGCAGCTGCTTATGCACCTACTCCTGATAACTTCCAAAGGTGTCTTGAGAGCATTAAAAGTATCTCATTAGAAGCTTACAATTGGATCGTACAAAGTGAGCCCTACAACTGGGCGAATGCATATTTTAAGGGTGCCAGATATAACCATATGACATCTAACTTTGGGGAGCTGTTTTACAGTTGGGCATCAGATGCACACGAGTTACCAATAACTCAGATGGTCGATGTGATCAGGGGTAAGATTATGGACTTGATCTACAAAAGAAGAGCAGATTCCGATCAATGGTTGACAAGGCTAACTCCATCCATGGAGGAAAAGCTAGAAAAGGAAACCCTTAAAGTCCAAAGCCTTCAAGTGCTGCTATCGGCTGGTAGCACATTTGAGGTTCGTGGTGACTCCATTGAAGTTGTGGATGTAGATTGCTGGAACTGTAGTTGTAAAGGGTGGCAGTTAACTGGTTTACCATGCTGTCATGCAATTGCAGTCATTGGTTGTATGGGTCGGAACCCATATGATTATTGTTCAAGATTCTTTACGACTGACAGCTACAGATTGACATACTCAGAGTCAATACATCCTATTCCACAAGTAGACATTCCTGTGACGAAGACTACTTCTCAGGTAGCAGTAACCGTTAGCCCTCCTCCAACACGACGCCCACCTGGCCGGCCAACTACCAAAAAATATGGACCGCAAGAAATGAATAAGCGTCAACTCCAGTGTAGCAGATGCAAGGGTCTGGGGCACAACAAGTCCACATGCAAGGAGATATTACTAGAGTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBD_Tnp_Mut MULE PB1 SWIM

Protein Analysis

769

Amino Acids

87.07

Weight (kDa)

6.21

Isoelectric Point (pI)

37.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DBD_Tnp_Mut	PF03108	26 - 90	2.9e-31	MuDR family transposase
MULE	PF10551	221 - 312	2.2e-12	MULE transposase domain
SWIM	PF04434	472 - 500	9e-09	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004893)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05850
fragaria_vesca	FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441
malus_domestica	MD04G1186800.v1.1 MD12G1200300.v1.1
prunus_persica	Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1
pyrus_communis	pycom04g16490
rosa_chinensis	RchiOBHm_Chr3g0458421
rosa_laevigata	RLG00000025158
rosa_roxburghii	Rroxscaffold_6G00421080
rosa_rugosa	Rorug03G0027800 Rorug03G0027900 Rorug03G0028000 Rorug03G0028100 Rorug03G0028200 Rorug03G0028300
rosa_samantha	Rh3AG087600 Rh3BG090400 Rh3CG090700 Rh3DG091300
rosa_wichuraiana	Rw3G007440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	900
Acc16I	TGCGCA	2 cut(s)	251, 660
AccB1I	GGYRCC	1 cut(s)	1652
AccI	GTMKAC	2 cut(s)	761, 2112
AciI	CCGC	2 cut(s)	84, 2213
AclWI	GGATC	2 cut(s)	249, 1613
AcoI	YGGCCR	3 cut(s)	1365, 2185, 2189
AcsI	RAATTY	6 cut(s)	44, 260, 583, 626, 741, 942
AcuI	CTGAAG	3 cut(s)	744, 983, 1346
AcyI	GRCGYC	1 cut(s)	2176
AdeI	CACNNNGTG	1 cut(s)	1492
AfaI	GTAC	3 cut(s)	67, 191, 1611
AfiI	CCNNNNNNNGG	4 cut(s)	536, 972, 1629, 1803
AflIII	ACRYGT	2 cut(s)	177, 806
AjnI	CCWGG	4 cut(s)	199, 965, 1066, 2182
AleI	CACNNNNGTG	2 cut(s)	574, 1277
AluBI	AGCT	8 cut(s)	949, 997, 1324, 1526, 1595, 1690, 1840, 2067
AluI	AGCT	8 cut(s)	949, 997, 1324, 1526, 1595, 1690, 1840, 2067
Alw21I	GWGCWC	1 cut(s)	571
Alw26I	GTCTC	5 cut(s)	328, 1052, 1129, 1458, 1492
Alw44I	GTGCAC	1 cut(s)	567
AlwI	GGATC	2 cut(s)	249, 1613
AoxI	GGCC	5 cut(s)	538, 1166, 1365, 2185, 2189
ApaLI	GTGCAC	1 cut(s)	567
ApeKI	GCWGC	7 cut(s)	729, 994, 1226, 1235, 1523, 1526, 1879
ApoI	RAATTY	6 cut(s)	44, 260, 583, 626, 741, 942
AspLEI	GCGC	2 cut(s)	252, 661
AspS9I	GGNCC	1 cut(s)	2210
AsuHPI	GGTGA	7 cut(s)	53, 98, 130, 431, 510, 1504, 1925
AvaII	GGWCC	1 cut(s)	2210
BaeGI	GKGCMC	2 cut(s)	571, 2268
BanI	GGYRCC	1 cut(s)	1652
BanII	GRGCYC	1 cut(s)	1623
BarI	GAAGNNNNNNTAC	2 cut(s)	869, 901
BauI	CACGAG	2 cut(s)	1487, 1718
BbsI	GAAGAC	2 cut(s)	218, 2135
Bbv12I	GWGCWC	1 cut(s)	571
BbvI	GCAGC	7 cut(s)	716, 1006, 1213, 1222, 1513, 1535, 1866
BccI	CCATC	6 cut(s)	56, 191, 1235, 1244, 1732, 1831
BcgI	CGANNNNNNTGC	2 cut(s)	539, 573
BciT130I	CCWGG	4 cut(s)	201, 967, 1068, 2184
BclI	TGATCA	2 cut(s)	255, 1749
BcoDI	GTCTC	5 cut(s)	328, 1052, 1129, 1458, 1492
BfaI	CTAG	5 cut(s)	446, 467, 861, 1841, 2297
BfmI	CTRYAG	4 cut(s)	1236, 1319, 1951, 2068
BglI	GCCNNNNNGGC	1 cut(s)	2184
BisI	GCNGC	7 cut(s)	730, 995, 1227, 1236, 1524, 1527, 1880
BlsI	GCNGC	7 cut(s)	731, 996, 1228, 1237, 1525, 1528, 1881
BmcAI	AGTACT	1 cut(s)	191
Bme1390I	CCNGG	4 cut(s)	201, 967, 1068, 2184
Bme18I	GGWCC	1 cut(s)	2210
BmgT120I	GGNCC	1 cut(s)	2210
BmiI	GGNNCC	3 cut(s)	1151, 1654, 2027
BmrFI	CCNGG	4 cut(s)	201, 967, 1068, 2184
BmrI	ACTGGG	1 cut(s)	1639
BmsI	GCATC	8 cut(s)	439, 670, 758, 844, 1273, 1702, 1715, 2240
BmuI	ACTGGG	1 cut(s)	1639
BpiI	GAAGAC	2 cut(s)	218, 2135
BpmI	CTGGAG	1 cut(s)	2222
Bpu10I	CCTNAGC	1 cut(s)	561
BpuEI	CTTGAG	1 cut(s)	1586
Bsa29I	ATCGAT	1 cut(s)	486
BsaBI	GATNNNNATC	2 cut(s)	696, 1797
BsaHI	GRCGYC	1 cut(s)	2176
BsaJI	CCNNGG	8 cut(s)	199, 200, 734, 906, 1066, 1092, 1423, 1827
Bsc4I	CCNNNNNNNGG	4 cut(s)	536, 972, 1629, 1803
Bse118I	RCCGGY	2 cut(s)	1113, 2187
Bse1I	ACTGG	6 cut(s)	339, 380, 1307, 1634, 1981, 2239
Bse3DI	GCAATG	2 cut(s)	638, 654
Bse8I	GATNNNNATC	2 cut(s)	696, 1797
BseBI	CCWGG	4 cut(s)	201, 967, 1068, 2184
BseCI	ATCGAT	1 cut(s)	486
BseDI	CCNNGG	8 cut(s)	199, 200, 734, 906, 1066, 1092, 1423, 1827
BseGI	GGATG	7 cut(s)	67, 406, 1252, 1288, 1823, 1939, 2095
BseJI	GATNNNNATC	2 cut(s)	696, 1797
BseLI	CCNNNNNNNGG	4 cut(s)	536, 972, 1629, 1803
BseMI	GCAATG	2 cut(s)	638, 654
BseMII	CTCAG	7 cut(s)	45, 501, 782, 1440, 1748, 2097, 2153
BseNI	ACTGG	6 cut(s)	339, 380, 1307, 1634, 1981, 2239
BseRI	GAGGAG	1 cut(s)	2154
BseSI	GKGCMC	2 cut(s)	571, 2268
BseXI	GCAGC	7 cut(s)	716, 1006, 1213, 1222, 1513, 1535, 1866
BseYI	CCCAGC	1 cut(s)	429
BshFI	GGCC	5 cut(s)	540, 1168, 1367, 2187, 2191
BshNI	GGYRCC	1 cut(s)	1652
BshVI	ATCGAT	1 cut(s)	486
BsiHKAI	GWGCWC	1 cut(s)	571
BsiSI	CCGG	2 cut(s)	1114, 2188
BslI	CCNNNNNNNGG	4 cut(s)	536, 972, 1629, 1803
BsmAI	GTCTC	5 cut(s)	328, 1052, 1129, 1458, 1492
BsmI	GAATGC	2 cut(s)	1188, 1642
BsnI	GGCC	5 cut(s)	540, 1168, 1367, 2187, 2191
Bsp1286I	GDGCHC	3 cut(s)	571, 1623, 2268
Bsp143I	GATC	7 cut(s)	241, 255, 499, 1605, 1749, 1773, 1798
Bsp19I	CCATGG	2 cut(s)	1423, 1827
BspACI	CCGC	2 cut(s)	84, 2213
BspANI	GGCC	5 cut(s)	540, 1168, 1367, 2187, 2191
BspCNI	CTCAG	7 cut(s)	46, 502, 781, 1441, 1747, 2096, 2152
BspDI	ATCGAT	1 cut(s)	486
BspHI	TCATGA	1 cut(s)	622
BspLI	GGNNCC	3 cut(s)	1151, 1654, 2027
BspMAI	CTGCAG	1 cut(s)	1240
BspPI	GGATC	2 cut(s)	249, 1613
BspQI	GCTCTTC	1 cut(s)	1780
BspT107I	GGYRCC	1 cut(s)	1652
BsrDI	GCAATG	2 cut(s)	638, 654
BsrFI	RCCGGY	2 cut(s)	1113, 2187
BsrI	ACTGG	6 cut(s)	339, 380, 1307, 1634, 1981, 2239
BssAI	RCCGGY	2 cut(s)	1113, 2187
BssECI	CCNNGG	8 cut(s)	199, 200, 734, 906, 1066, 1092, 1423, 1827
BssMI	GATC	7 cut(s)	241, 255, 499, 1605, 1749, 1773, 1798
BssNI	GRCGYC	1 cut(s)	2176
BssSI	CACGAG	2 cut(s)	1487, 1718
BssT1I	CCWWGG	5 cut(s)	734, 906, 1092, 1423, 1827
Bst2BI	CACGAG	2 cut(s)	1487, 1718
Bst2UI	CCWGG	4 cut(s)	201, 967, 1068, 2184
Bst4CI	ACNGT	8 cut(s)	226, 283, 373, 709, 1276, 1700, 1952, 2155
Bst6I	CTCTTC	3 cut(s)	5, 1490, 1780
BstACI	GRCGYC	1 cut(s)	2176
BstAPI	GCANNNNNTGC	2 cut(s)	1235, 1712
BstC8I	GCNNGC	4 cut(s)	336, 1166, 1436, 2189
BstDEI	CTNAG	8 cut(s)	54, 510, 561, 768, 1449, 1734, 2083, 2139
BstDSI	CCRYGG	2 cut(s)	1423, 1827
BstF5I	GGATG	7 cut(s)	67, 406, 1252, 1288, 1823, 1939, 2095
BstHHI	GCGC	2 cut(s)	252, 661
BstKTI	GATC	7 cut(s)	244, 258, 502, 1608, 1752, 1776, 1801
BstMAI	GTCTC	5 cut(s)	328, 1052, 1129, 1458, 1492
BstMBI	GATC	7 cut(s)	241, 255, 499, 1605, 1749, 1773, 1798
BstMWI	GCNNNNNNNGC	6 cut(s)	566, 1232, 1235, 1532, 1712, 2184
BstNI	CCWGG	4 cut(s)	201, 967, 1068, 2184
BstNSI	RCATGY	4 cut(s)	181, 334, 810, 2283
BstSCI	CCNGG	4 cut(s)	199, 965, 1066, 2182
BstSFI	CTRYAG	4 cut(s)	1236, 1319, 1951, 2068
BstSLI	GKGCMC	2 cut(s)	571, 2268
BstV1I	GCAGC	7 cut(s)	716, 1006, 1213, 1222, 1513, 1535, 1866
BstV2I	GAAGAC	2 cut(s)	218, 2135
BstX2I	RGATCY	1 cut(s)	241
BstYI	RGATCY	1 cut(s)	241
Bsu15I	ATCGAT	1 cut(s)	486
BsuRI	GGCC	5 cut(s)	540, 1168, 1367, 2187, 2191
BsuTUI	ATCGAT	1 cut(s)	486
BtgI	CCRYGG	2 cut(s)	1423, 1827
BtsCI	GGATG	7 cut(s)	67, 406, 1252, 1288, 1823, 1939, 2095
BtsI	GCAGTG	1 cut(s)	581
BtsIMutI	CAGTG	4 cut(s)	507, 581, 1272, 2246
Cac8I	GCNNGC	4 cut(s)	336, 1166, 1436, 2189
CciI	TCATGA	1 cut(s)	622
CfoI	GCGC	2 cut(s)	252, 661
Cfr10I	RCCGGY	2 cut(s)	1113, 2187
Cfr13I	GGNCC	1 cut(s)	2210
ClaI	ATCGAT	1 cut(s)	486
CseI	GACGC	4 cut(s)	98, 1025, 2184, 2219
Csp6I	GTAC	3 cut(s)	66, 190, 1610
CviQI	GTAC	3 cut(s)	66, 190, 1610
DdeI	CTNAG	8 cut(s)	54, 510, 561, 768, 1449, 1734, 2083, 2139
DpnI	GATC	7 cut(s)	243, 257, 501, 1607, 1751, 1775, 1800
DpnII	GATC	7 cut(s)	241, 255, 499, 1605, 1749, 1773, 1798
DraIII	CACNNNGTG	1 cut(s)	1492
EaeI	YGGCCR	3 cut(s)	1365, 2185, 2189
Eam1104I	CTCTTC	3 cut(s)	5, 1490, 1780
EarI	CTCTTC	3 cut(s)	5, 1490, 1780
Eco130I	CCWWGG	5 cut(s)	734, 906, 1092, 1423, 1827
Eco147I	AGGCCT	1 cut(s)	1168
Eco24I	GRGCYC	1 cut(s)	1623
Eco32I	GATATC	2 cut(s)	439, 913
Eco47I	GGWCC	1 cut(s)	2210
Eco57I	CTGAAG	3 cut(s)	744, 983, 1346
EcoRI	GAATTC	4 cut(s)	44, 583, 741, 942
EcoRII	CCWGG	4 cut(s)	199, 965, 1066, 2182
EcoRV	GATATC	2 cut(s)	439, 913
EcoT14I	CCWWGG	5 cut(s)	734, 906, 1092, 1423, 1827
EcoT22I	ATGCAT	2 cut(s)	751, 1642
EcoT38I	GRGCYC	1 cut(s)	1623
ErhI	CCWWGG	5 cut(s)	734, 906, 1092, 1423, 1827
FauNDI	CATATG	2 cut(s)	1668, 2032
FbaI	TGATCA	2 cut(s)	255, 1749
FblI	GTMKAC	2 cut(s)	761, 2112
Fnu4HI	GCNGC	7 cut(s)	730, 995, 1227, 1236, 1524, 1527, 1880
FokI	GGATG	7 cut(s)	74, 413, 1259, 1295, 1810, 1946, 2082
FriOI	GRGCYC	1 cut(s)	1623
FseI	GGCCGGCC	1 cut(s)	2191
Fsp4HI	GCNGC	7 cut(s)	730, 995, 1227, 1236, 1524, 1527, 1880
FspAI	RTGCGCAY	1 cut(s)	251
FspBI	CTAG	5 cut(s)	446, 467, 861, 1841, 2297
FspI	TGCGCA	2 cut(s)	251, 660
GlaI	GCGC	2 cut(s)	251, 660
GluI	GCNGC	7 cut(s)	730, 995, 1227, 1236, 1524, 1527, 1880
GsaI	CCCAGC	1 cut(s)	433
GsuI	CTGGAG	1 cut(s)	2222
HaeIII	GGCC	5 cut(s)	540, 1168, 1367, 2187, 2191
HapII	CCGG	2 cut(s)	1114, 2188
HgaI	GACGC	4 cut(s)	98, 1025, 2184, 2219
HhaI	GCGC	2 cut(s)	252, 661
Hin1I	GRCGYC	1 cut(s)	2176
Hin6I	GCGC	2 cut(s)	250, 659
HinP1I	GCGC	2 cut(s)	250, 659
HincII	GTYRAC	3 cut(s)	1809, 1974, 2234
HindII	GTYRAC	3 cut(s)	1809, 1974, 2234
HindIII	AAGCTT	1 cut(s)	1593
HpaI	GTTAAC	1 cut(s)	1974
HpaII	CCGG	2 cut(s)	1114, 2188
HphI	GGTGA	7 cut(s)	53, 98, 130, 431, 510, 1504, 1925
Hpy166II	GTNNAC	8 cut(s)	569, 762, 1809, 1974, 1982, 2113, 2234, 2277
Hpy8I	GTNNAC	8 cut(s)	569, 762, 1809, 1974, 1982, 2113, 2234, 2277
Hpy99I	CGWCG	1 cut(s)	2178
HpyAV	CCTTC	7 cut(s)	52, 107, 719, 806, 982, 1372, 1880
HpyCH4III	ACNGT	8 cut(s)	226, 283, 373, 709, 1276, 1700, 1952, 2155
HpyF10VI	GCNNNNNNNGC	6 cut(s)	566, 1232, 1235, 1532, 1712, 2184
HpyF3I	CTNAG	8 cut(s)	54, 510, 561, 768, 1449, 1734, 2083, 2139
Hsp92I	GRCGYC	1 cut(s)	2176
HspAI	GCGC	2 cut(s)	250, 659
KroI	GCCGGC	1 cut(s)	2187
KroNI	GCCGGC	1 cut(s)	2189
Ksp22I	TGATCA	2 cut(s)	255, 1749
KspAI	GTTAAC	1 cut(s)	1974
Kzo9I	GATC	7 cut(s)	241, 255, 499, 1605, 1749, 1773, 1798
LguI	GCTCTTC	1 cut(s)	1780
LmnI	GCTCC	2 cut(s)	991, 1687
Lsp1109I	GCAGC	7 cut(s)	716, 1006, 1213, 1222, 1513, 1535, 1866
LweI	GCATC	8 cut(s)	439, 670, 758, 844, 1273, 1702, 1715, 2240
MaeI	CTAG	5 cut(s)	446, 467, 861, 1841, 2297
MaeIII	GTNAC	9 cut(s)	86, 164, 516, 703, 1029, 1722, 1913, 2122, 2149
MalI	GATC	7 cut(s)	243, 257, 501, 1607, 1751, 1775, 1800
MboI	GATC	7 cut(s)	241, 255, 499, 1605, 1749, 1773, 1798
MfeI	CAATTG	3 cut(s)	1395, 1600, 1998
MflI	RGATCY	1 cut(s)	241
MhlI	GDGCHC	3 cut(s)	571, 1623, 2268
MlyI	GAGTC	4 cut(s)	1409, 1494, 1910, 2096
MmeI	TCCRAC	2 cut(s)	2003, 2192
Mph1103I	ATGCAT	2 cut(s)	751, 1642
MroNI	GCCGGC	1 cut(s)	2187
MslI	CAYNNNNRTG	7 cut(s)	251, 512, 574, 805, 807, 1277, 2120
MspA1I	CMGCKG	3 cut(s)	949, 1324, 1526
MspI	CCGG	2 cut(s)	1114, 2188
MspR9I	CCNGG	4 cut(s)	201, 967, 1068, 2184
MunI	CAATTG	3 cut(s)	1395, 1600, 1998
Mva1269I	GAATGC	2 cut(s)	1188, 1642
MvaI	CCWGG	4 cut(s)	201, 967, 1068, 2184
MwoI	GCNNNNNNNGC	6 cut(s)	566, 1232, 1235, 1532, 1712, 2184
NaeI	GCCGGC	1 cut(s)	2189
NcoI	CCATGG	2 cut(s)	1423, 1827
NdeI	CATATG	2 cut(s)	1668, 2032
NdeII	GATC	7 cut(s)	241, 255, 499, 1605, 1749, 1773, 1798
NgoMIV	GCCGGC	1 cut(s)	2187
NlaIV	GGNNCC	3 cut(s)	1151, 1654, 2027
NmuCI	GTSAC	5 cut(s)	86, 516, 703, 1913, 2122
NsbI	TGCGCA	2 cut(s)	251, 660
NsiI	ATGCAT	2 cut(s)	751, 1642
NspI	RCATGY	4 cut(s)	181, 334, 810, 2283
OliI	CACNNNNGTG	2 cut(s)	574, 1277
PagI	TCATGA	1 cut(s)	622
PasI	CCCWGGG	1 cut(s)	200
PceI	AGGCCT	1 cut(s)	1168
PciI	ACATGT	2 cut(s)	177, 806
PciSI	GCTCTTC	1 cut(s)	1780
PctI	GAATGC	2 cut(s)	1188, 1642
PdiI	GCCGGC	1 cut(s)	2189
PfeI	GAWTC	8 cut(s)	15, 609, 635, 793, 1100, 1391, 1793, 2049
PflFI	GACNNNGTC	1 cut(s)	361
PkrI	GCNGC	7 cut(s)	731, 996, 1228, 1237, 1525, 1528, 1881
PleI	GAGTC	4 cut(s)	1409, 1494, 1910, 2095
PpsI	GAGTC	4 cut(s)	1409, 1494, 1910, 2095
PscI	ACATGT	2 cut(s)	177, 806
PsiI	TTATAA	1 cut(s)	900
Psp6I	CCWGG	4 cut(s)	199, 965, 1066, 2182
PspFI	CCCAGC	1 cut(s)	429
PspGI	CCWGG	4 cut(s)	199, 965, 1066, 2182
PspN4I	GGNNCC	3 cut(s)	1151, 1654, 2027
PspPI	GGNCC	1 cut(s)	2210
PstI	CTGCAG	1 cut(s)	1240
PsuI	RGATCY	1 cut(s)	241
PsyI	GACNNNGTC	1 cut(s)	361
PvuII	CAGCTG	3 cut(s)	949, 1324, 1526
RigI	GGCCGGCC	1 cut(s)	2191
RsaI	GTAC	3 cut(s)	67, 191, 1611
RsaNI	GTAC	3 cut(s)	66, 190, 1610
RseI	CAYNNNNRTG	7 cut(s)	251, 512, 574, 805, 807, 1277, 2120
SapI	GCTCTTC	1 cut(s)	1780
SatI	GCNGC	7 cut(s)	730, 995, 1227, 1236, 1524, 1527, 1880
Sau3AI	GATC	7 cut(s)	241, 255, 499, 1605, 1749, 1773, 1798
Sau96I	GGNCC	1 cut(s)	2210
ScaI	AGTACT	1 cut(s)	191
SchI	GAGTC	4 cut(s)	1409, 1494, 1910, 2096
ScrFI	CCNGG	4 cut(s)	201, 967, 1068, 2184
SduI	GDGCHC	3 cut(s)	571, 1623, 2268
SfaNI	GCATC	8 cut(s)	439, 670, 758, 844, 1273, 1702, 1715, 2240
SfcI	CTRYAG	4 cut(s)	1236, 1319, 1951, 2068
SinI	GGWCC	1 cut(s)	2210
SmiMI	CAYNNNNRTG	7 cut(s)	251, 512, 574, 805, 807, 1277, 2120
SmlI	CTYRAG	1 cut(s)	1565
SmoI	CTYRAG	1 cut(s)	1565
SseBI	AGGCCT	1 cut(s)	1168
SsiI	CCGC	2 cut(s)	84, 2213
SspI	AATATT	1 cut(s)	1407
SspMI	CTAG	5 cut(s)	446, 467, 861, 1841, 2297
StuI	AGGCCT	1 cut(s)	1168
StyD4I	CCNGG	4 cut(s)	199, 965, 1066, 2182
StyI	CCWWGG	5 cut(s)	734, 906, 1092, 1423, 1827
TaaI	ACNGT	8 cut(s)	226, 283, 373, 709, 1276, 1700, 1952, 2155
TaqI	TCGA	4 cut(s)	285, 486, 1103, 1743
TatI	WGTACW	1 cut(s)	189
TfiI	GAWTC	8 cut(s)	15, 609, 635, 793, 1100, 1391, 1793, 2049
TscAI	CASTG	4 cut(s)	514, 581, 1279, 2246
TseFI	GTSAC	5 cut(s)	86, 516, 703, 1913, 2122
TseI	GCWGC	7 cut(s)	729, 994, 1226, 1235, 1523, 1526, 1879
Tsp45I	GTSAC	5 cut(s)	86, 516, 703, 1913, 2122
TspDTI	ATGAA	7 cut(s)	126, 611, 639, 734, 806, 996, 2237
TspRI	CASTG	4 cut(s)	514, 581, 1279, 2246
Tth111I	GACNNNGTC	1 cut(s)	361
VneI	GTGCAC	1 cut(s)	567
VpaK11BI	GGWCC	1 cut(s)	2210
XapI	RAATTY	6 cut(s)	44, 260, 583, 626, 741, 942
XbaI	TCTAGA	1 cut(s)	466
XceI	RCATGY	4 cut(s)	181, 334, 810, 2283
XcmI	CCANNNNNNNNNTGG	2 cut(s)	595, 1927
XmiI	GTMKAC	2 cut(s)	761, 2112
XspI	CTAG	5 cut(s)	446, 467, 861, 1841, 2297
ZrmI	AGTACT	1 cut(s)	191
Zsp2I	ATGCAT	2 cut(s)	751, 1642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.