Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0004893

Physical Location & Seq

Genomic Coordinates Forward (+)

42619916 .. 42624616

Gene Structure 4701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025158

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGTCACCCCTTTTCCCTTATATTGGCCCCAATGACGACAAACATGCTAAGGGTGCACAGCAGTGGCAGAATTCCATTACGGGTGTGGGTCAAAGATTCAGTAGTGTTCATGAATTTCGTGAATCATTGCGTAAATATGCCATTGCACATCAGTTTGCCTTTAGGTATAAGAAGAATGATAGTCATCGTGTGACTGTTAAGTGCAAGGCTGACGGCTGCCCTTGGAGAATTCATGCATCAAGGTTGTCTACGACTCAGTTAATATGTATCAAGAAGATGAATCCAACACATACATGTGAAGGGGCTGTTGCAACAACAGGGCATCAGGCGACAAGGAGTTGGGTGGCTAGTATTATTAAGGAGAAGTTAAAATACTTGCCTAATTACAAGCCCAAGGATATCGTCAATGACATCAAGCAAGAATATGGAATCCAGCTGAACTACTTTCAAGCCTGGCGTGGGAAAGAAATAGCAAAGGAGCAGCTTCAGGGTTCATACAAAGACGCATATAATCAGTTACCCCTTTTCTGTGAGAAGATAATGGAGACAAACCCAGGTAGTTTTGCTATATTTACTACTAAGGAAGACTCCAGTTTCCATCGTCTCTTTGTCTCATTCCATGCCTCATTATCTGGTTTCCAGCAAGGTTGCAGGCCTCTCCTTTTTCTTGATAGCATTCCTTTAAAGTCAAAATATCAAGGCACATTGTTGGCTGCGACTGCTGCAGATGGGGATGATGAGGTTTTCCCTGTTGCTTTCACTGTTGTGGATGCAGAAAGTGATGATAACTGGCATTGGTTTTTACTTCAGCTGAAATCCTCATTTTCAACAACTTGTCCGATAACATTTGTGGCAGACAGACAGAAGGGGCTAAGGGAATCAATTGCTGAAGTATTCAAAGACTCATACCATGGCTATTGCCTGCGATACTTGACTGAGCAACTTATCAGAGACTTGAGGGGGCAGTTTTCTCACGAGGTGAAGCGACTCATGGTTGAGGATTTCTATGCTGCTGCTTATGCACCTACTCCAGATAACTTCCAAAGGTGTCTTGAGAGCATTAAAACTATTTCATTAGAAGCTTACAATTGGATCATACAAAGTGAGCCATACAACTGGGCGAATGCATATTTTAAGGGTGCCAGATATAACCATATGACATCAAACTTTGGAGAGCTGTTTTACAGTTGGGCATCAGATGCACACGAGTTACCAATAACTCAGATGGTTGATGTGATCAGGGGTAAGATTATGGACTCGATCTACAAAAGAAGAGCAGATTCCGATCAATGGTTGACAAGGCTAACTCCATCCATGGAGGAAAAGCTAGATAAGGAAACCCTTAAAGTTCAAAACCTCCAAGTACTACTATCAGCTGGTAGCACATTTGAGGTTCGTGGTGAATCCATTGAAGTTGTTGATTTAGATTGCTGGAACTGCAGTTGTAAAGGGTGGCAGATAACTGGTTTACCATGCTGTCATGCAATTGCTGTCATTGGTTGTACGGGTCGGAACCCATATGATTATTGTTCAAGATTCTTTACTACTGACAGCTACAGATTGACATACTCAGAGTCAATACATCCTATTCCACAAGTAGACATTCCTGTGACAAAGACTACTTCTCAGGTAGCAGTAACTGTAAGCCCTCCTCCAACCCGCCGTCCACCTGGCCGGCCAACGACAAAAAAGTATGGATCTCAAGGAATGAATAAGCGCCAACTCCAGTGTAGCAGATGCAAGGGTCTTGGGCACAACAAATCCACTTGCAAAGAGATATTAATAGAGTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBD_Tnp_Mut MULE PB1 SWIM

Protein Analysis

598

Amino Acids

68.17

Weight (kDa)

8.73

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DBD_Tnp_Mut	PF03108	26 - 90	6.1e-31	MuDR family transposase
MULE	PF10551	221 - 312	4e-13	MULE transposase domain
SWIM	PF04434	472 - 501	1.3e-08	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004893)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05850
fragaria_vesca	FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441 FvH4_6g08441
malus_domestica	MD04G1186800.v1.1 MD12G1200300.v1.1
prunus_persica	Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1 Prupe.6G305400_v2.0.a1
pyrus_communis	pycom04g16490
rosa_chinensis	RchiOBHm_Chr3g0458421
rosa_laevigata	RLG00000025158
rosa_roxburghii	Rroxscaffold_6G00421080
rosa_rugosa	Rorug03G0027800 Rorug03G0027900 Rorug03G0028000 Rorug03G0028100 Rorug03G0028200 Rorug03G0028300
rosa_samantha	Rh3AG087600 Rh3BG090400 Rh3CG090700 Rh3DG091300
rosa_wichuraiana	Rw3G007440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1139
AccI	GTMKAC	2 cut(s)	248, 1599
AciI	CCGC	1 cut(s)	1660
AclWI	GGATC	2 cut(s)	1100, 1705
AcoI	YGGCCR	2 cut(s)	1672, 1676
AcsI	RAATTY	3 cut(s)	70, 113, 228
AcuI	CTGAAG	3 cut(s)	470, 791, 909
AdeI	CACNNNGTG	1 cut(s)	979
AfaI	GTAC	2 cut(s)	1365, 1504
AfiI	CCNNNNNNNGG	3 cut(s)	23, 459, 1290
AflIII	ACRYGT	1 cut(s)	293
AgsI	TTSAA	6 cut(s)	449, 828, 898, 1352, 1412, 1533
AjnI	CCWGG	3 cut(s)	452, 553, 1669
AleI	CACNNNNGTG	2 cut(s)	61, 764
AluBI	AGCT	8 cut(s)	436, 484, 811, 1082, 1177, 1327, 1376, 1554
AluI	AGCT	8 cut(s)	436, 484, 811, 1082, 1177, 1327, 1376, 1554
Alw21I	GWGCWC	1 cut(s)	58
Alw26I	GTCTC	4 cut(s)	539, 608, 616, 945
Alw44I	GTGCAC	1 cut(s)	54
AlwI	GGATC	2 cut(s)	1100, 1705
AlwNI	CAGNNNCTG	1 cut(s)	1640
AoxI	GGCC	4 cut(s)	25, 653, 1672, 1676
ApaLI	GTGCAC	1 cut(s)	54
ApeKI	GCWGC	6 cut(s)	216, 481, 713, 722, 1010, 1013
ApoI	RAATTY	3 cut(s)	70, 113, 228
AseI	ATTAAT	1 cut(s)	1781
AspLEI	GCGC	1 cut(s)	1719
AspS9I	GGNCC	1 cut(s)	26
AsuHPI	GGTGA	2 cut(s)	991, 1412
BaeGI	GKGCMC	2 cut(s)	58, 1755
BanI	GGYRCC	1 cut(s)	1139
BarI	GAAGNNNNNNTAC	2 cut(s)	356, 388
BauI	CACGAG	2 cut(s)	974, 1205
BbsI	GAAGAC	1 cut(s)	591
Bbv12I	GWGCWC	1 cut(s)	58
BbvI	GCAGC	6 cut(s)	203, 493, 700, 709, 997, 1000
BccI	CCATC	4 cut(s)	606, 722, 1219, 1318
BceAI	ACGGC	2 cut(s)	229, 1647
BcgI	CGANNNNNNTGC	2 cut(s)	26, 60
BciT130I	CCWGG	3 cut(s)	454, 555, 1671
BclI	TGATCA	1 cut(s)	1236
BcoDI	GTCTC	4 cut(s)	539, 608, 616, 945
BfaI	CTAG	2 cut(s)	348, 1328
BfmI	CTRYAG	3 cut(s)	723, 1438, 1555
BfoI	RGCGCY	1 cut(s)	1720
BisI	GCNGC	6 cut(s)	217, 482, 714, 723, 1011, 1014
BlsI	GCNGC	6 cut(s)	218, 483, 715, 724, 1012, 1015
BmcAI	AGTACT	1 cut(s)	1365
Bme1390I	CCNGG	3 cut(s)	454, 555, 1671
BmgT120I	GGNCC	1 cut(s)	26
BmiI	GGNNCC	3 cut(s)	28, 1141, 1514
BmrFI	CCNGG	3 cut(s)	454, 555, 1671
BmrI	ACTGGG	1 cut(s)	1126
BmsI	GCATC	6 cut(s)	245, 331, 760, 1189, 1202, 1727
BmuI	ACTGGG	1 cut(s)	1126
BpiI	GAAGAC	1 cut(s)	591
BpmI	CTGGAG	3 cut(s)	574, 1014, 1709
Bpu10I	CCTNAGC	2 cut(s)	48, 872
BpuEI	CTTGAG	3 cut(s)	976, 1073, 1686
BsaBI	GATNNNNATC	2 cut(s)	183, 1284
BsaJI	CCNNGG	5 cut(s)	221, 393, 553, 910, 1314
Bsc4I	CCNNNNNNNGG	3 cut(s)	23, 459, 1290
Bse118I	RCCGGY	1 cut(s)	1674
Bse1I	ACTGG	5 cut(s)	591, 794, 1121, 1468, 1726
Bse3DI	GCAATG	2 cut(s)	125, 141
Bse8I	GATNNNNATC	2 cut(s)	183, 1284
BseBI	CCWGG	3 cut(s)	454, 555, 1671
BseDI	CCNNGG	5 cut(s)	221, 393, 553, 910, 1314
BseGI	GGATG	4 cut(s)	739, 775, 1310, 1582
BseJI	GATNNNNATC	2 cut(s)	183, 1284
BseLI	CCNNNNNNNGG	3 cut(s)	23, 459, 1290
BseMI	GCAATG	2 cut(s)	125, 141
BseMII	CTCAG	5 cut(s)	269, 927, 1235, 1584, 1640
BseNI	ACTGG	5 cut(s)	591, 794, 1121, 1468, 1726
BseRI	GAGGAG	1 cut(s)	1641
BseSI	GKGCMC	2 cut(s)	58, 1755
BseXI	GCAGC	6 cut(s)	203, 493, 700, 709, 997, 1000
BshFI	GGCC	4 cut(s)	27, 655, 1674, 1678
BshNI	GGYRCC	1 cut(s)	1139
BsiHKAI	GWGCWC	1 cut(s)	58
BsiSI	CCGG	1 cut(s)	1675
BslI	CCNNNNNNNGG	3 cut(s)	23, 459, 1290
BsmAI	GTCTC	4 cut(s)	539, 608, 616, 945
BsmBI	CGTCTC	1 cut(s)	608
BsmI	GAATGC	2 cut(s)	675, 1129
BsnI	GGCC	4 cut(s)	27, 655, 1674, 1678
Bsp1286I	GDGCHC	2 cut(s)	58, 1755
Bsp143I	GATC	5 cut(s)	1092, 1236, 1260, 1285, 1697
Bsp19I	CCATGG	2 cut(s)	910, 1314
BspACI	CCGC	1 cut(s)	1660
BspANI	GGCC	4 cut(s)	27, 655, 1674, 1678
BspCNI	CTCAG	5 cut(s)	268, 928, 1234, 1583, 1639
BspHI	TCATGA	1 cut(s)	109
BspLI	GGNNCC	3 cut(s)	28, 1141, 1514
BspMAI	CTGCAG	2 cut(s)	727, 1442
BspPI	GGATC	2 cut(s)	1100, 1705
BspQI	GCTCTTC	1 cut(s)	1267
BspT107I	GGYRCC	1 cut(s)	1139
BsrDI	GCAATG	2 cut(s)	125, 141
BsrFI	RCCGGY	1 cut(s)	1674
BsrI	ACTGG	5 cut(s)	591, 794, 1121, 1468, 1726
BssAI	RCCGGY	1 cut(s)	1674
BssECI	CCNNGG	5 cut(s)	221, 393, 553, 910, 1314
BssMI	GATC	5 cut(s)	1092, 1236, 1260, 1285, 1697
BssSI	CACGAG	2 cut(s)	974, 1205
BssT1I	CCWWGG	4 cut(s)	221, 393, 910, 1314
Bst2BI	CACGAG	2 cut(s)	974, 1205
Bst2UI	CCWGG	3 cut(s)	454, 555, 1671
Bst4CI	ACNGT	4 cut(s)	196, 763, 1187, 1642
Bst6I	CTCTTC	1 cut(s)	1267
BstAPI	GCANNNNNTGC	1 cut(s)	1199
BstC8I	GCNNGC	3 cut(s)	653, 923, 1676
BstDEI	CTNAG	8 cut(s)	48, 255, 579, 872, 936, 1221, 1570, 1626
BstDSI	CCRYGG	2 cut(s)	910, 1314
BstF5I	GGATG	4 cut(s)	739, 775, 1310, 1582
BstH2I	RGCGCY	1 cut(s)	1720
BstHHI	GCGC	1 cut(s)	1719
BstKTI	GATC	5 cut(s)	1095, 1239, 1263, 1288, 1700
BstMAI	GTCTC	4 cut(s)	539, 608, 616, 945
BstMBI	GATC	5 cut(s)	1092, 1236, 1260, 1285, 1697
BstMWI	GCNNNNNNNGC	6 cut(s)	53, 719, 722, 1019, 1199, 1437
BstNI	CCWGG	3 cut(s)	454, 555, 1671
BstNSI	RCATGY	2 cut(s)	47, 297
BstSCI	CCNGG	3 cut(s)	452, 553, 1669
BstSFI	CTRYAG	3 cut(s)	723, 1438, 1555
BstSLI	GKGCMC	2 cut(s)	58, 1755
BstV1I	GCAGC	6 cut(s)	203, 493, 700, 709, 997, 1000
BstV2I	GAAGAC	1 cut(s)	591
BstX2I	RGATCY	1 cut(s)	1697
BstXI	CCANNNNNNTGG	1 cut(s)	1116
BstYI	RGATCY	1 cut(s)	1697
BsuRI	GGCC	4 cut(s)	27, 655, 1674, 1678
BtgI	CCRYGG	2 cut(s)	910, 1314
BtsCI	GGATG	4 cut(s)	739, 775, 1310, 1582
BtsI	GCAGTG	1 cut(s)	68
BtsIMutI	CAGTG	3 cut(s)	68, 759, 1733
Cac8I	GCNNGC	3 cut(s)	653, 923, 1676
CaiI	CAGNNNCTG	1 cut(s)	1640
CciI	TCATGA	1 cut(s)	109
CfoI	GCGC	1 cut(s)	1719
Cfr10I	RCCGGY	1 cut(s)	1674
Cfr13I	GGNCC	1 cut(s)	26
CseI	GACGC	1 cut(s)	512
Csp6I	GTAC	2 cut(s)	1364, 1503
CviQI	GTAC	2 cut(s)	1364, 1503
DdeI	CTNAG	8 cut(s)	48, 255, 579, 872, 936, 1221, 1570, 1626
DpnI	GATC	5 cut(s)	1094, 1238, 1262, 1287, 1699
DpnII	GATC	5 cut(s)	1092, 1236, 1260, 1285, 1697
DraI	TTTAAA	1 cut(s)	684
DraIII	CACNNNGTG	1 cut(s)	979
EaeI	YGGCCR	2 cut(s)	1672, 1676
Eam1104I	CTCTTC	1 cut(s)	1267
EarI	CTCTTC	1 cut(s)	1267
Eco130I	CCWWGG	4 cut(s)	221, 393, 910, 1314
Eco147I	AGGCCT	1 cut(s)	655
Eco32I	GATATC	1 cut(s)	400
Eco57I	CTGAAG	3 cut(s)	470, 791, 909
EcoRI	GAATTC	2 cut(s)	70, 228
EcoRII	CCWGG	3 cut(s)	452, 553, 1669
EcoRV	GATATC	1 cut(s)	400
EcoT14I	CCWWGG	4 cut(s)	221, 393, 910, 1314
EcoT22I	ATGCAT	2 cut(s)	238, 1129
ErhI	CCWWGG	4 cut(s)	221, 393, 910, 1314
Esp3I	CGTCTC	1 cut(s)	608
FauI	CCCGC	1 cut(s)	1667
FauNDI	CATATG	2 cut(s)	1155, 1519
FbaI	TGATCA	1 cut(s)	1236
FblI	GTMKAC	2 cut(s)	248, 1599
Fnu4HI	GCNGC	6 cut(s)	217, 482, 714, 723, 1011, 1014
FokI	GGATG	4 cut(s)	746, 782, 1297, 1569
FseI	GGCCGGCC	1 cut(s)	1678
Fsp4HI	GCNGC	6 cut(s)	217, 482, 714, 723, 1011, 1014
FspBI	CTAG	2 cut(s)	348, 1328
GlaI	GCGC	1 cut(s)	1718
GluI	GCNGC	6 cut(s)	217, 482, 714, 723, 1011, 1014
GsuI	CTGGAG	3 cut(s)	574, 1014, 1709
HaeII	RGCGCY	1 cut(s)	1720
HaeIII	GGCC	4 cut(s)	27, 655, 1674, 1678
HapII	CCGG	1 cut(s)	1675
HgaI	GACGC	1 cut(s)	512
HhaI	GCGC	1 cut(s)	1719
Hin6I	GCGC	1 cut(s)	1717
HinP1I	GCGC	1 cut(s)	1717
HincII	GTYRAC	1 cut(s)	1296
HindII	GTYRAC	1 cut(s)	1296
HindIII	AAGCTT	1 cut(s)	1080
HpaII	CCGG	1 cut(s)	1675
HphI	GGTGA	2 cut(s)	991, 1412
Hpy166II	GTNNAC	6 cut(s)	56, 249, 1296, 1469, 1600, 1667
Hpy188I	TCNGA	7 cut(s)	840, 950, 1198, 1224, 1285, 1512, 1573
Hpy188III	TCNNGA	8 cut(s)	110, 119, 271, 668, 974, 1031, 1052, 1533
Hpy8I	GTNNAC	6 cut(s)	56, 249, 1296, 1469, 1600, 1667
HpyAV	CCTTC	2 cut(s)	293, 859
HpyCH4III	ACNGT	4 cut(s)	196, 763, 1187, 1642
HpyF10VI	GCNNNNNNNGC	6 cut(s)	53, 719, 722, 1019, 1199, 1437
HpyF3I	CTNAG	8 cut(s)	48, 255, 579, 872, 936, 1221, 1570, 1626
HspAI	GCGC	1 cut(s)	1717
KroI	GCCGGC	1 cut(s)	1674
KroNI	GCCGGC	1 cut(s)	1676
Ksp22I	TGATCA	1 cut(s)	1236
Kzo9I	GATC	5 cut(s)	1092, 1236, 1260, 1285, 1697
LguI	GCTCTTC	1 cut(s)	1267
LmnI	GCTCC	1 cut(s)	478
Lsp1109I	GCAGC	6 cut(s)	203, 493, 700, 709, 997, 1000
LweI	GCATC	6 cut(s)	245, 331, 760, 1189, 1202, 1727
MaeI	CTAG	2 cut(s)	348, 1328
MaeIII	GTNAC	6 cut(s)	3, 190, 516, 1209, 1609, 1636
MalI	GATC	5 cut(s)	1094, 1238, 1262, 1287, 1699
MboI	GATC	5 cut(s)	1092, 1236, 1260, 1285, 1697
MboII	GAAGA	5 cut(s)	184, 286, 547, 596, 1284
MfeI	CAATTG	3 cut(s)	882, 1087, 1485
MflI	RGATCY	1 cut(s)	1697
MhlI	GDGCHC	2 cut(s)	58, 1755
MluCI	AATT	7 cut(s)	70, 113, 228, 382, 882, 1087, 1485
MlyI	GAGTC	6 cut(s)	247, 581, 896, 981, 1250, 1583
MmeI	TCCRAC	3 cut(s)	308, 1490, 1679
Mph1103I	ATGCAT	2 cut(s)	238, 1129
MroNI	GCCGGC	1 cut(s)	1674
MseI	TTAA	9 cut(s)	198, 260, 357, 368, 683, 1062, 1134, 1344, 1781
MslI	CAYNNNNRTG	5 cut(s)	61, 292, 294, 764, 1607
MspA1I	CMGCKG	3 cut(s)	436, 811, 1376
MspI	CCGG	1 cut(s)	1675
MspR9I	CCNGG	3 cut(s)	454, 555, 1671
MunI	CAATTG	3 cut(s)	882, 1087, 1485
Mva1269I	GAATGC	2 cut(s)	675, 1129
MvaI	CCWGG	3 cut(s)	454, 555, 1671
MwoI	GCNNNNNNNGC	6 cut(s)	53, 719, 722, 1019, 1199, 1437
NaeI	GCCGGC	1 cut(s)	1676
NcoI	CCATGG	2 cut(s)	910, 1314
NdeI	CATATG	2 cut(s)	1155, 1519
NdeII	GATC	5 cut(s)	1092, 1236, 1260, 1285, 1697
NgoMIV	GCCGGC	1 cut(s)	1674
NlaIV	GGNNCC	3 cut(s)	28, 1141, 1514
NmuCI	GTSAC	3 cut(s)	3, 190, 1609
NsiI	ATGCAT	2 cut(s)	238, 1129
NspI	RCATGY	2 cut(s)	47, 297
OliI	CACNNNNGTG	2 cut(s)	61, 764
PagI	TCATGA	1 cut(s)	109
PceI	AGGCCT	1 cut(s)	655
PciI	ACATGT	1 cut(s)	293
PciSI	GCTCTTC	1 cut(s)	1267
PctI	GAATGC	2 cut(s)	675, 1129
PdiI	GCCGGC	1 cut(s)	1676
PfeI	GAWTC	8 cut(s)	96, 122, 280, 429, 878, 1280, 1403, 1536
PkrI	GCNGC	6 cut(s)	218, 483, 715, 724, 1012, 1015
PleI	GAGTC	6 cut(s)	247, 581, 896, 981, 1250, 1582
PpsI	GAGTC	6 cut(s)	247, 581, 896, 981, 1250, 1582
PscI	ACATGT	1 cut(s)	293
PshBI	ATTAAT	1 cut(s)	1781
Psp6I	CCWGG	3 cut(s)	452, 553, 1669
PspGI	CCWGG	3 cut(s)	452, 553, 1669
PspN4I	GGNNCC	3 cut(s)	28, 1141, 1514
PspPI	GGNCC	1 cut(s)	26
PstI	CTGCAG	2 cut(s)	727, 1442
PstNI	CAGNNNCTG	1 cut(s)	1640
PsuI	RGATCY	1 cut(s)	1697
PvuII	CAGCTG	3 cut(s)	436, 811, 1376
RigI	GGCCGGCC	1 cut(s)	1678
RsaI	GTAC	2 cut(s)	1365, 1504
RsaNI	GTAC	2 cut(s)	1364, 1503
RseI	CAYNNNNRTG	5 cut(s)	61, 292, 294, 764, 1607
SapI	GCTCTTC	1 cut(s)	1267
SaqAI	TTAA	9 cut(s)	198, 260, 357, 368, 683, 1062, 1134, 1344, 1781
SatI	GCNGC	6 cut(s)	217, 482, 714, 723, 1011, 1014
Sau3AI	GATC	5 cut(s)	1092, 1236, 1260, 1285, 1697
Sau96I	GGNCC	1 cut(s)	26
ScaI	AGTACT	1 cut(s)	1365
SchI	GAGTC	6 cut(s)	247, 581, 896, 981, 1250, 1583
ScrFI	CCNGG	3 cut(s)	454, 555, 1671
SduI	GDGCHC	2 cut(s)	58, 1755
SfaNI	GCATC	6 cut(s)	245, 331, 760, 1189, 1202, 1727
SfcI	CTRYAG	3 cut(s)	723, 1438, 1555
SmiMI	CAYNNNNRTG	5 cut(s)	61, 292, 294, 764, 1607
SmlI	CTYRAG	3 cut(s)	955, 1052, 1701
SmoI	CTYRAG	3 cut(s)	955, 1052, 1701
Sse9I	AATT	7 cut(s)	70, 113, 228, 382, 882, 1087, 1485
SseBI	AGGCCT	1 cut(s)	655
SsiI	CCGC	1 cut(s)	1660
SspMI	CTAG	2 cut(s)	348, 1328
StuI	AGGCCT	1 cut(s)	655
StyD4I	CCNGG	3 cut(s)	452, 553, 1669
StyI	CCWWGG	4 cut(s)	221, 393, 910, 1314
TaaI	ACNGT	4 cut(s)	196, 763, 1187, 1642
TaqI	TCGA	1 cut(s)	1259
TasI	AATT	7 cut(s)	70, 113, 228, 382, 882, 1087, 1485
TatI	WGTACW	1 cut(s)	1363
TfiI	GAWTC	8 cut(s)	96, 122, 280, 429, 878, 1280, 1403, 1536
Tru1I	TTAA	9 cut(s)	198, 260, 357, 368, 683, 1062, 1134, 1344, 1781
Tru9I	TTAA	9 cut(s)	198, 260, 357, 368, 683, 1062, 1134, 1344, 1781
TscAI	CASTG	3 cut(s)	68, 766, 1733
TseFI	GTSAC	3 cut(s)	3, 190, 1609
TseI	GCWGC	6 cut(s)	216, 481, 713, 722, 1010, 1013
Tsp45I	GTSAC	3 cut(s)	3, 190, 1609
TspDTI	ATGAA	7 cut(s)	98, 126, 221, 293, 483, 1062, 1724
TspRI	CASTG	3 cut(s)	68, 766, 1733
VneI	GTGCAC	1 cut(s)	54
VspI	ATTAAT	1 cut(s)	1781
XapI	RAATTY	3 cut(s)	70, 113, 228
XceI	RCATGY	2 cut(s)	47, 297
XcmI	CCANNNNNNNNNTGG	1 cut(s)	82
XmiI	GTMKAC	2 cut(s)	248, 1599
XspI	CTAG	2 cut(s)	348, 1328
ZrmI	AGTACT	1 cut(s)	1365
Zsp2I	ATGCAT	2 cut(s)	238, 1129

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.