AT3G07630

Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
2435408 .. 2437989
2582 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G07630.2

Sequence Viewer

Length: 1146 bp
ATGGCAATGCACACTGTTCGATTGTCGCCGGCGACTCAACTTCACGGCGGTATCTCTAGCAATCTGTCACCACCCAATCGAAAACCTAATAATTCCATCGTCCGATACGGATGCGGATCTTCGAAGCGTTTCCGTATCGTAACGGTCTTGGCGTCACTCCGGGAAAACGATGCAAACGGAAGGGATAACTCCGTGAGAGCTATGGAAGTGAAGAAGATCTTTGAAGACTCGCCTCTGCTTCCTAAGCCGTTATCATCGAACCAGCTCACGGAATCTGTCTCTAATGGCTCCCGCGTTCGTGTTGCGTATCAGGGAGTACGAGGTGCATACAGCGAATCAGCTGCTGAGAAGGCTTATCCAAACTGTGAAGCTGTTCCATGCGAAGAGTTTGACACTGCTTTTGAGGCGGTTGAGCGGTGGCTTGTTGACAGAGCTGTTTTACCGATTGAGAACTCTTTAGGTGGAAGCATCCATAGAAATTATGATCTTCTGCTGCGACACAATTTGCATATTGTAGGCGAAGTCAAGCTAGCTGTTCGGCACTGTTTGTTGGCTAACCACGGTGTAAATATTGAAGATTTGAGAAGGGTGCTTAGCCATCCACAGGCTCTTGCCCAATGTGAAAACACGTTAACCAAATTGGGGTTGGTCAGAGAAGCAGTAGATGATACTGCTGGCGCTGCGAAGCAAATTGCATTCGAAAATTTAAATGATGCAGCTGCAGTTGCCAGTGAAAAAGCTGCAAAGATATATGGTTTGAACATAGTCGCTAAAGATATCCAGGATGACTGTGATAATGTTACAAGGTTTCTAATGCTCGCAAGAGAACCCATTATCCCTGGAACTAACAGACTCTTTAAGACAAGTATAGTTTTCTCGTTAGAGGAAGGGCCTGGAGTACTTTTCAAAGCGCTTGCTGTGTTTGCCCTTCGGCAAATCAACCTCACAAAGATTGAAAGCCGCCCTTTAAGGAAACATCCTCTCCGAGCATCTGGAGGACTAAAATACTTTGACTATCTTTTCTATGTGGACTTTGAAGCATCTATGGCTGATGAAGTTGCTCAAAACGCACTTAGGCATCTCGAGGAGTTTGCTACCTTTTTGCGGGTACTGGGAAGCTACCCAGTGGACACTACAATGCTCTAA

Protein Analysis

381

Amino Acids

42.11

Weight (kDa)

7.67

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDT PF00800 101 - 276 2.3e-61 Prephenate dehydratase
ACT PF01842 288 - 328 9.9e-06 ACT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 415
AccII CGCG 1 cut(s) 294
AciI CCGC 7 cut(s) 48, 114, 292, 407, 415, 961, 1105
AclWI GGATC 1 cut(s) 124
AcsI RAATTY 1 cut(s) 703
AcyI GRCGYC 1 cut(s) 152
AfaI GTAC 3 cut(s) 318, 900, 1110
AfeI AGCGCT 1 cut(s) 912
AfiI CCNNNNNNNGG 4 cut(s) 268, 604, 642, 1104
AflIII ACRYGT 1 cut(s) 627
AgsI TTSAA 6 cut(s) 224, 575, 760, 907, 956, 1037
AjnI CCWGG 3 cut(s) 780, 838, 892
AloI GAACNNNNNNTCC 2 cut(s) 819, 851
Alw26I GTCTC 1 cut(s) 283
AlwI GGATC 1 cut(s) 124
AlwNI CAGNNNCTG 1 cut(s) 344
Ama87I CYCGRG 1 cut(s) 1082
Aor51HI AGCGCT 1 cut(s) 912
AoxI GGCC 1 cut(s) 890
ApeKI GCWGC 6 cut(s) 341, 493, 680, 716, 719, 740
ApoI RAATTY 1 cut(s) 703
ArsI GACNNNNNNTTYG 2 cut(s) 383, 415
Asp700I GAANNNNTTC 2 cut(s) 128, 372
AspLEI GCGC 2 cut(s) 680, 913
AspS9I GGNCC 1 cut(s) 890
AsuC2I CCSGG 1 cut(s) 161
AsuHPI GGTGA 1 cut(s) 60
AsuII TTCGAA 2 cut(s) 122, 699
AsuNHI GCTAGC 1 cut(s) 529
AvaI CYCGRG 1 cut(s) 1082
BaeI ACNNNNGTAYC 2 cut(s) 34, 67
BbsI GAAGAC 1 cut(s) 231
BbvI GCAGC 6 cut(s) 328, 480, 667, 706, 727, 728
BccI CCATC 2 cut(s) 104, 606
BceAI ACGGC 2 cut(s) 61, 232
BcgI CGANNNNNNTGC 7 cut(s) 33, 93, 127, 323, 357, 1073, 1107
BciT130I CCWGG 3 cut(s) 782, 840, 894
BcnI CCSGG 1 cut(s) 161
BcoDI GTCTC 1 cut(s) 283
BfaI CTAG 2 cut(s) 57, 530
BfmI CTRYAG 1 cut(s) 720
BfoI RGCGCY 2 cut(s) 681, 914
BglII AGATCT 1 cut(s) 216
BisI GCNGC 7 cut(s) 342, 494, 681, 717, 720, 741, 961
BlpI GCTNAGC 1 cut(s) 593
BlsI GCNGC 7 cut(s) 343, 495, 682, 718, 721, 742, 962
BmcAI AGTACT 1 cut(s) 900
Bme1390I CCNGG 4 cut(s) 161, 782, 840, 894
BmeT110I CYCGRG 1 cut(s) 1082
BmgT120I GGNCC 1 cut(s) 890
BmiI GGNNCC 1 cut(s) 289
BmrFI CCNGG 4 cut(s) 161, 782, 840, 894
BmrI ACTGGG 2 cut(s) 1118, 1121
BmsI GCATC 7 cut(s) 101, 160, 477, 703, 998, 1049, 1087
BmtI GCTAGC 1 cut(s) 533
BmuI ACTGGG 2 cut(s) 1118, 1121
BpiI GAAGAC 1 cut(s) 231
BpmI CTGGAG 2 cut(s) 915, 1014
Bpu10I CCTNAGC 1 cut(s) 243
Bpu1102I GCTNAGC 1 cut(s) 593
Bpu14I TTCGAA 2 cut(s) 122, 699
BpuMI CCSGG 1 cut(s) 161
BsaBI GATNNNNATC 1 cut(s) 115
BsaHI GRCGYC 1 cut(s) 152
BsaJI CCNNGG 2 cut(s) 559, 838
BsaXI ACNNNNNCTCC 2 cut(s) 966, 996
Bsc4I CCNNNNNNNGG 4 cut(s) 268, 604, 642, 1104
Bse118I RCCGGY 1 cut(s) 28
Bse1I ACTGG 3 cut(s) 729, 1116, 1124
Bse3DI GCAATG 1 cut(s) 12
Bse8I GATNNNNATC 1 cut(s) 115
BseBI CCWGG 3 cut(s) 782, 840, 894
BseDI CCNNGG 2 cut(s) 559, 838
BseGI GGATG 5 cut(s) 116, 468, 598, 790, 976
BseJI GATNNNNATC 1 cut(s) 115
BseLI CCNNNNNNNGG 4 cut(s) 268, 604, 642, 1104
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 1 cut(s) 336
BseNI ACTGG 3 cut(s) 729, 1116, 1124
BseRI GAGGAG 1 cut(s) 1100
BseXI GCAGC 6 cut(s) 328, 480, 667, 706, 727, 728
Bsh1236I CGCG 1 cut(s) 294
BshFI GGCC 1 cut(s) 892
BsiHKCI CYCGRG 1 cut(s) 1082
BsiSI CCGG 2 cut(s) 29, 160
BslI CCNNNNNNNGG 4 cut(s) 268, 604, 642, 1104
BsmAI GTCTC 1 cut(s) 283
BsmI GAATGC 1 cut(s) 695
BsnI GGCC 1 cut(s) 892
BsoBI CYCGRG 1 cut(s) 1082
Bsp119I TTCGAA 2 cut(s) 122, 699
Bsp143I GATC 3 cut(s) 116, 216, 484
Bsp1720I GCTNAGC 1 cut(s) 593
BspACI CCGC 7 cut(s) 48, 114, 292, 407, 415, 961, 1105
BspANI GGCC 1 cut(s) 892
BspCNI CTCAG 1 cut(s) 337
BspFNI CGCG 1 cut(s) 294
BspLI GGNNCC 1 cut(s) 289
BspMAI CTGCAG 1 cut(s) 724
BspOI GCTAGC 1 cut(s) 533
BspPI GGATC 1 cut(s) 124
BspT104I TTCGAA 2 cut(s) 122, 699
BsrBI CCGCTC 1 cut(s) 415
BsrDI GCAATG 1 cut(s) 12
BsrFI RCCGGY 1 cut(s) 28
BsrI ACTGG 3 cut(s) 729, 1116, 1124
BssAI RCCGGY 1 cut(s) 28
BssECI CCNNGG 2 cut(s) 559, 838
BssMI GATC 3 cut(s) 116, 216, 484
BssNI GRCGYC 1 cut(s) 152
Bst2UI CCWGG 3 cut(s) 782, 840, 894
Bst4CI ACNGT 6 cut(s) 16, 145, 365, 545, 563, 791
Bst6I CTCTTC 1 cut(s) 378
BstACI GRCGYC 1 cut(s) 152
BstBI TTCGAA 2 cut(s) 122, 699
BstC8I GCNNGC 5 cut(s) 30, 531, 676, 819, 915
BstDEI CTNAG 4 cut(s) 243, 345, 593, 1073
BstDSI CCRYGG 1 cut(s) 559
BstF5I GGATG 5 cut(s) 116, 468, 598, 790, 976
BstFNI CGCG 1 cut(s) 294
BstH2I RGCGCY 2 cut(s) 681, 914
BstHHI GCGC 2 cut(s) 680, 913
BstKTI GATC 3 cut(s) 119, 219, 487
BstMAI GTCTC 1 cut(s) 283
BstMBI GATC 3 cut(s) 116, 216, 484
BstMWI GCNNNNNNNGC 8 cut(s) 244, 350, 404, 680, 725, 923, 1046, 1067
BstNI CCWGG 3 cut(s) 782, 840, 894
BstSCI CCNGG 4 cut(s) 159, 780, 838, 892
BstSFI CTRYAG 1 cut(s) 720
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 6 cut(s) 328, 480, 667, 706, 727, 728
BstV2I GAAGAC 1 cut(s) 231
BstX2I RGATCY 2 cut(s) 116, 216
BstYI RGATCY 2 cut(s) 116, 216
BsuRI GGCC 1 cut(s) 892
BtgI CCRYGG 1 cut(s) 559
BtsCI GGATG 5 cut(s) 116, 468, 598, 790, 976
BtsI GCAGTG 1 cut(s) 393
BtsIMutI CAGTG 5 cut(s) 12, 393, 541, 736, 1131
Cac8I GCNNGC 5 cut(s) 30, 531, 676, 819, 915
CaiI CAGNNNCTG 1 cut(s) 344
CfoI GCGC 2 cut(s) 680, 913
Cfr10I RCCGGY 1 cut(s) 28
Cfr13I GGNCC 1 cut(s) 890
CseI GACGC 1 cut(s) 141
Csp6I GTAC 3 cut(s) 317, 899, 1109
CviAII CATG 1 cut(s) 378
CviQI GTAC 3 cut(s) 317, 899, 1109
DdeI CTNAG 4 cut(s) 243, 345, 593, 1073
DpnI GATC 3 cut(s) 118, 218, 486
DpnII GATC 3 cut(s) 116, 216, 484
DraI TTTAAA 1 cut(s) 708
Eam1104I CTCTTC 1 cut(s) 378
EarI CTCTTC 1 cut(s) 378
Eco32I GATATC 1 cut(s) 778
Eco47III AGCGCT 1 cut(s) 912
Eco88I CYCGRG 1 cut(s) 1082
EcoO109I RGGNCCY 1 cut(s) 890
EcoRII CCWGG 3 cut(s) 780, 838, 892
EcoRV GATATC 1 cut(s) 778
FaeI CATG 1 cut(s) 381
FalI AAGNNNNNCTT 4 cut(s) 203, 235, 949, 981
FatI CATG 1 cut(s) 377
FauI CCCGC 2 cut(s) 299, 1098
Fnu4HI GCNGC 7 cut(s) 342, 494, 681, 717, 720, 741, 961
FokI GGATG 5 cut(s) 123, 455, 585, 797, 963
Fsp4HI GCNGC 7 cut(s) 342, 494, 681, 717, 720, 741, 961
FspBI CTAG 2 cut(s) 57, 530
GlaI GCGC 2 cut(s) 679, 912
GluI GCNGC 7 cut(s) 342, 494, 681, 717, 720, 741, 961
GsuI CTGGAG 2 cut(s) 915, 1014
HaeII RGCGCY 2 cut(s) 681, 914
HaeIII GGCC 1 cut(s) 892
HapII CCGG 2 cut(s) 29, 160
HgaI GACGC 1 cut(s) 141
HhaI GCGC 2 cut(s) 680, 913
Hin1I GRCGYC 1 cut(s) 152
Hin1II CATG 1 cut(s) 381
Hin6I GCGC 2 cut(s) 678, 911
HinP1I GCGC 2 cut(s) 678, 911
HincII GTYRAC 2 cut(s) 427, 633
HindII GTYRAC 2 cut(s) 427, 633
HinfI GANTC 5 cut(s) 34, 227, 272, 335, 852
HpaI GTTAAC 1 cut(s) 633
HpaII CCGG 2 cut(s) 29, 160
HphI GGTGA 1 cut(s) 60
Hpy166II GTNNAC 4 cut(s) 427, 633, 1030, 1129
Hpy188I TCNGA 3 cut(s) 104, 653, 986
Hpy188III TCNNGA 2 cut(s) 993, 1082
Hpy8I GTNNAC 4 cut(s) 427, 633, 1030, 1129
HpyAV CCTTC 5 cut(s) 174, 343, 579, 881, 938
HpyCH4III ACNGT 6 cut(s) 16, 145, 365, 545, 563, 791
HpyCH4IV ACGT 1 cut(s) 629
HpyCH4V TGCA 8 cut(s) 10, 173, 326, 508, 695, 716, 722, 743
HpyF10VI GCNNNNNNNGC 8 cut(s) 244, 350, 404, 680, 725, 923, 1046, 1067
HpyF3I CTNAG 4 cut(s) 243, 345, 593, 1073
HpySE526I ACGT 1 cut(s) 629
Hsp92I GRCGYC 1 cut(s) 152
Hsp92II CATG 1 cut(s) 381
HspAI GCGC 2 cut(s) 678, 911
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
KspAI GTTAAC 1 cut(s) 633
Kzo9I GATC 3 cut(s) 116, 216, 484
LmnI GCTCC 1 cut(s) 293
Lsp1109I GCAGC 6 cut(s) 328, 480, 667, 706, 727, 728
LweI GCATC 7 cut(s) 101, 160, 477, 703, 998, 1049, 1087
MaeI CTAG 2 cut(s) 57, 530
MaeII ACGT 1 cut(s) 629
MaeIII GTNAC 4 cut(s) 66, 139, 153, 799
MalI GATC 3 cut(s) 118, 218, 486
MbiI CCGCTC 1 cut(s) 415
MboI GATC 3 cut(s) 116, 216, 484
MboII GAAGA 7 cut(s) 111, 223, 226, 236, 395, 479, 587
MflI RGATCY 2 cut(s) 116, 216
MluCI AATT 6 cut(s) 91, 478, 502, 638, 690, 703
MlyI GAGTC 3 cut(s) 28, 221, 846
MnlI CCTC 8 cut(s) 243, 314, 397, 877, 953, 989, 990, 1078
MreI CGCCGGCG 1 cut(s) 28
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 2 cut(s) 128, 372
MseI TTAA 4 cut(s) 632, 707, 858, 968
MslI CAYNNNNRTG 1 cut(s) 1136
MspA1I CMGCKG 2 cut(s) 341, 719
MspI CCGG 2 cut(s) 29, 160
MspR9I CCNGG 4 cut(s) 161, 782, 840, 894
Mva1269I GAATGC 1 cut(s) 695
MvaI CCWGG 3 cut(s) 782, 840, 894
MvnI CGCG 1 cut(s) 294
MwoI GCNNNNNNNGC 8 cut(s) 244, 350, 404, 680, 725, 923, 1046, 1067
NaeI GCCGGC 1 cut(s) 30
NciI CCSGG 1 cut(s) 161
NdeII GATC 3 cut(s) 116, 216, 484
NgoMIV GCCGGC 1 cut(s) 28
NheI GCTAGC 1 cut(s) 529
NlaIII CATG 1 cut(s) 381
NlaIV GGNNCC 1 cut(s) 289
NmuCI GTSAC 2 cut(s) 66, 153
NspV TTCGAA 2 cut(s) 122, 699
PaeR7I CTCGAG 1 cut(s) 1082
PcsI WCGNNNNNNNCGW 1 cut(s) 149
PctI GAATGC 1 cut(s) 695
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 2 cut(s) 128, 372
PfeI GAWTC 2 cut(s) 272, 335
PfoI TCCNGGA 2 cut(s) 159, 780
PkrI GCNGC 7 cut(s) 343, 495, 682, 718, 721, 742, 962
PleI GAGTC 3 cut(s) 28, 221, 846
PpsI GAGTC 3 cut(s) 28, 221, 846
Psp6I CCWGG 3 cut(s) 780, 838, 892
PspGI CCWGG 3 cut(s) 780, 838, 892
PspN4I GGNNCC 1 cut(s) 289
PspPI GGNCC 1 cut(s) 890
PstI CTGCAG 1 cut(s) 724
PstNI CAGNNNCTG 1 cut(s) 344
PsuI RGATCY 2 cut(s) 116, 216
PvuII CAGCTG 2 cut(s) 341, 719
RsaI GTAC 3 cut(s) 318, 900, 1110
RsaNI GTAC 3 cut(s) 317, 899, 1109
RseI CAYNNNNRTG 1 cut(s) 1136
SaqAI TTAA 4 cut(s) 632, 707, 858, 968
SatI GCNGC 7 cut(s) 342, 494, 681, 717, 720, 741, 961
Sau3AI GATC 3 cut(s) 116, 216, 484
Sau96I GGNCC 1 cut(s) 890
ScaI AGTACT 1 cut(s) 900
SchI GAGTC 3 cut(s) 28, 221, 846
ScrFI CCNGG 4 cut(s) 161, 782, 840, 894
SfaNI GCATC 7 cut(s) 101, 160, 477, 703, 998, 1049, 1087
SfcI CTRYAG 1 cut(s) 720
Sfr274I CTCGAG 1 cut(s) 1082
SfuI TTCGAA 2 cut(s) 122, 699
SgrAI CRCCGGYG 1 cut(s) 28
SlaI CTCGAG 1 cut(s) 1082
SmiI ATTTAAAT 1 cut(s) 708
SmiMI CAYNNNNRTG 1 cut(s) 1136
SmlI CTYRAG 1 cut(s) 1082
SmoI CTYRAG 1 cut(s) 1082
Sse9I AATT 6 cut(s) 91, 478, 502, 638, 690, 703
SsiI CCGC 7 cut(s) 48, 114, 292, 407, 415, 961, 1105
SspI AATATT 1 cut(s) 571
SspMI CTAG 2 cut(s) 57, 530
StyD4I CCNGG 4 cut(s) 159, 780, 838, 892
SwaI ATTTAAAT 1 cut(s) 708
TaaI ACNGT 6 cut(s) 16, 145, 365, 545, 563, 791
TaiI ACGT 1 cut(s) 632
TaqI TCGA 6 cut(s) 19, 79, 122, 257, 699, 1083
TasI AATT 6 cut(s) 91, 478, 502, 638, 690, 703
TatI WGTACW 1 cut(s) 898
TauI GCSGC 1 cut(s) 963
TfiI GAWTC 2 cut(s) 272, 335
Tru1I TTAA 4 cut(s) 632, 707, 858, 968
Tru9I TTAA 4 cut(s) 632, 707, 858, 968
TscAI CASTG 5 cut(s) 19, 400, 548, 736, 1131
TseFI GTSAC 2 cut(s) 66, 153
TseI GCWGC 6 cut(s) 341, 493, 680, 716, 719, 740
Tsp45I GTSAC 2 cut(s) 66, 153
TspDTI ATGAA 1 cut(s) 1068
TspGWI ACGGA 5 cut(s) 122, 123, 181, 192, 284
TspRI CASTG 5 cut(s) 19, 400, 548, 736, 1131
XapI RAATTY 1 cut(s) 703
XcmI CCANNNNNNNNNTGG 1 cut(s) 643
XhoI CTCGAG 1 cut(s) 1082
XmnI GAANNNNTTC 2 cut(s) 128, 372
XspI CTAG 2 cut(s) 57, 530
ZrmI AGTACT 1 cut(s) 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.