Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07630 AT3G07630 AT3G07630 |
| fragaria_vesca | FvH4_3g33680 FvH4_3g33680 FvH4_3g33680 |
| malus_domestica | MD03G1109900.v1.1 MD11G1123300.v1.1 |
| prunus_persica | Prupe.6G092500_v2.0.a1 Prupe.6G092500_v2.0.a1 Prupe.6G092500_v2.0.a1 |
| pyrus_communis | pycom11g10410 |
| rosa_chinensis | RchiOBHm_Chr5g0061191 |
| rosa_laevigata | RLG00000003542 RLG00000035438 |
| rosa_multiflora | Rmu_sc0001366.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00019520 |
| rosa_rugosa | Rorug05G0338500 |
| rosa_samantha | Rh5AG399300 Rh5BG412500 Rh5CG437200 Rh5DG426800 |
| rosa_wichuraiana | Rw5G037670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 482 |
| AatII | GACGTC | 1 cut(s) | 264 |
| AccI | GTMKAC | 1 cut(s) | 305 |
| AciI | CCGC | 8 cut(s) | 5, 186, 340, 392, 444, 1018, 1028, 1159 |
| AclI | AACGTT | 1 cut(s) | 463 |
| AclWI | GGATC | 1 cut(s) | 18 |
| AcoI | YGGCCR | 1 cut(s) | 193 |
| AcsI | RAATTY | 2 cut(s) | 499, 1142 |
| AcuI | CTGAAG | 1 cut(s) | 1157 |
| AcyI | GRCGYC | 2 cut(s) | 8, 261 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 142, 634, 652, 955 |
| AflIII | ACRYGT | 1 cut(s) | 675 |
| AgsI | TTSAA | 7 cut(s) | 118, 452, 461, 617, 907, 1004, 1091 |
| AjnI | CCWGG | 4 cut(s) | 135, 141, 204, 940 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 484, 516 |
| AluBI | AGCT | 6 cut(s) | 95, 389, 455, 770, 780, 788 |
| AluI | AGCT | 6 cut(s) | 95, 389, 455, 770, 780, 788 |
| Alw21I | GWGCWC | 3 cut(s) | 220, 675, 1117 |
| Alw26I | GTCTC | 1 cut(s) | 331 |
| Alw44I | GTGCAC | 1 cut(s) | 1113 |
| AlwI | GGATC | 1 cut(s) | 18 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 770, 788 |
| AoxI | GGCC | 4 cut(s) | 138, 144, 193, 937 |
| ApaLI | GTGCAC | 1 cut(s) | 1113 |
| ApeKI | GCWGC | 7 cut(s) | 174, 234, 389, 728, 785, 788, 1030 |
| ApoI | RAATTY | 2 cut(s) | 499, 1142 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1142 |
| AspLEI | GCGC | 2 cut(s) | 239, 961 |
| AspS9I | GGNCC | 4 cut(s) | 139, 697, 938, 946 |
| AsuC2I | CCSGG | 1 cut(s) | 888 |
| AsuNHI | GCTAGC | 1 cut(s) | 776 |
| AvaII | GGWCC | 2 cut(s) | 697, 946 |
| AxyI | CCTNAGG | 1 cut(s) | 1127 |
| BaeGI | GKGCMC | 1 cut(s) | 1117 |
| BbsI | GAAGAC | 2 cut(s) | 3, 630 |
| Bbv12I | GWGCWC | 3 cut(s) | 220, 675, 1117 |
| BbvI | GCAGC | 7 cut(s) | 186, 246, 376, 740, 775, 797, 1017 |
| BccI | CCATC | 4 cut(s) | 318, 326, 654, 1174 |
| BceAI | ACGGC | 3 cut(s) | 199, 208, 993 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 223, 257, 259, 293 |
| BciT130I | CCWGG | 4 cut(s) | 137, 143, 206, 942 |
| BclI | TGATCA | 1 cut(s) | 1105 |
| BcnI | CCSGG | 1 cut(s) | 888 |
| BcoDI | GTCTC | 1 cut(s) | 331 |
| BfaI | CTAG | 3 cut(s) | 777, 929, 1166 |
| BfmI | CTRYAG | 1 cut(s) | 789 |
| BfoI | RGCGCY | 2 cut(s) | 240, 962 |
| BisI | GCNGC | 9 cut(s) | 6, 175, 187, 235, 390, 729, 786, 789, 1031 |
| BlpI | GCTNAGC | 1 cut(s) | 781 |
| BlsI | GCNGC | 9 cut(s) | 7, 176, 188, 236, 391, 730, 787, 790, 1032 |
| Bme1390I | CCNGG | 5 cut(s) | 137, 143, 206, 888, 942 |
| Bme18I | GGWCC | 2 cut(s) | 697, 946 |
| BmgT120I | GGNCC | 4 cut(s) | 139, 697, 938, 946 |
| BmiI | GGNNCC | 2 cut(s) | 337, 947 |
| BmrFI | CCNGG | 5 cut(s) | 137, 143, 206, 888, 942 |
| BmsI | GCATC | 5 cut(s) | 138, 525, 1046, 1103, 1141 |
| BmtI | GCTAGC | 1 cut(s) | 780 |
| BoxI | GACNNNNGTC | 1 cut(s) | 298 |
| BpiI | GAAGAC | 2 cut(s) | 3, 630 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 204, 236 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 781 |
| BpuMI | CCSGG | 1 cut(s) | 888 |
| BsaHI | GRCGYC | 2 cut(s) | 8, 261 |
| BsaI | GGTCTC | 1 cut(s) | 331 |
| BsaJI | CCNNGG | 4 cut(s) | 135, 141, 940, 941 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 142, 634, 652, 955 |
| Bse1I | ACTGG | 1 cut(s) | 603 |
| Bse21I | CCTNAGG | 1 cut(s) | 1127 |
| Bse3DI | GCAATG | 1 cut(s) | 589 |
| BseBI | CCWGG | 4 cut(s) | 137, 143, 206, 942 |
| BseDI | CCNNGG | 4 cut(s) | 135, 141, 940, 941 |
| BseGI | GGATG | 4 cut(s) | 516, 646, 718, 838 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 142, 634, 652, 955 |
| BseMI | GCAATG | 1 cut(s) | 589 |
| BseMII | CTCAG | 4 cut(s) | 171, 556, 677, 795 |
| BseNI | ACTGG | 1 cut(s) | 603 |
| BseSI | GKGCMC | 1 cut(s) | 1117 |
| BseXI | GCAGC | 7 cut(s) | 186, 246, 376, 740, 775, 797, 1017 |
| BsgI | GTGCAG | 1 cut(s) | 747 |
| Bsh1285I | CGRYCG | 1 cut(s) | 172 |
| BshFI | GGCC | 4 cut(s) | 140, 146, 195, 939 |
| BsiEI | CGRYCG | 1 cut(s) | 172 |
| BsiHKAI | GWGCWC | 3 cut(s) | 220, 675, 1117 |
| BsiSI | CCGG | 1 cut(s) | 888 |
| BslFI | GGGAC | 1 cut(s) | 996 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 142, 634, 652, 955 |
| BsmAI | GTCTC | 1 cut(s) | 331 |
| BsmFI | GGGAC | 1 cut(s) | 996 |
| BsnI | GGCC | 4 cut(s) | 140, 146, 195, 939 |
| Bso31I | GGTCTC | 1 cut(s) | 331 |
| Bsp1286I | GDGCHC | 3 cut(s) | 220, 675, 1117 |
| Bsp143I | GATC | 4 cut(s) | 23, 76, 169, 1105 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 781 |
| BspACI | CCGC | 8 cut(s) | 5, 186, 340, 392, 444, 1018, 1028, 1159 |
| BspANI | GGCC | 4 cut(s) | 140, 146, 195, 939 |
| BspCNI | CTCAG | 4 cut(s) | 170, 555, 676, 794 |
| BspLI | GGNNCC | 2 cut(s) | 337, 947 |
| BspMAI | CTGCAG | 1 cut(s) | 793 |
| BspOI | GCTAGC | 1 cut(s) | 780 |
| BspPI | GGATC | 1 cut(s) | 18 |
| BspTNI | GGTCTC | 1 cut(s) | 331 |
| BsrDI | GCAATG | 1 cut(s) | 589 |
| BsrI | ACTGG | 1 cut(s) | 603 |
| BssECI | CCNNGG | 4 cut(s) | 135, 141, 940, 941 |
| BssMI | GATC | 4 cut(s) | 23, 76, 169, 1105 |
| BssNI | GRCGYC | 2 cut(s) | 8, 261 |
| Bst2UI | CCWGG | 4 cut(s) | 137, 143, 206, 942 |
| BstACI | GRCGYC | 2 cut(s) | 8, 261 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 553, 1030, 1121 |
| BstC8I | GCNNGC | 4 cut(s) | 778, 867, 963, 1035 |
| BstDEI | CTNAG | 6 cut(s) | 157, 542, 641, 663, 781, 1127 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 953 |
| BstF5I | GGATG | 4 cut(s) | 516, 646, 718, 838 |
| BstH2I | RGCGCY | 2 cut(s) | 240, 962 |
| BstHHI | GCGC | 2 cut(s) | 239, 961 |
| BstKTI | GATC | 4 cut(s) | 26, 79, 172, 1108 |
| BstMAI | GTCTC | 1 cut(s) | 331 |
| BstMBI | GATC | 4 cut(s) | 23, 76, 169, 1105 |
| BstMCI | CGRYCG | 1 cut(s) | 172 |
| BstNI | CCWGG | 4 cut(s) | 137, 143, 206, 942 |
| BstNSI | RCATGY | 1 cut(s) | 740 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 298 |
| BstSCI | CCNGG | 5 cut(s) | 135, 141, 204, 886, 940 |
| BstSFI | CTRYAG | 1 cut(s) | 789 |
| BstSLI | GKGCMC | 1 cut(s) | 1117 |
| BstV1I | GCAGC | 7 cut(s) | 186, 246, 376, 740, 775, 797, 1017 |
| BstV2I | GAAGAC | 2 cut(s) | 3, 630 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 209 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1127 |
| BsuRI | GGCC | 4 cut(s) | 140, 146, 195, 939 |
| BtgZI | GCGATG | 1 cut(s) | 115 |
| BtsCI | GGATG | 4 cut(s) | 516, 646, 718, 838 |
| BtsI | GCAGTG | 2 cut(s) | 426, 714 |
| BtsIMutI | CAGTG | 3 cut(s) | 426, 671, 714 |
| Cac8I | GCNNGC | 4 cut(s) | 778, 867, 963, 1035 |
| CaiI | CAGNNNCTG | 2 cut(s) | 770, 788 |
| CfoI | GCGC | 2 cut(s) | 239, 961 |
| Cfr13I | GGNCC | 4 cut(s) | 139, 697, 938, 946 |
| CseI | GACGC | 1 cut(s) | 968 |
| CsiI | ACCWGGT | 1 cut(s) | 204 |
| CviAII | CATG | 3 cut(s) | 608, 737, 1192 |
| DdeI | CTNAG | 6 cut(s) | 157, 542, 641, 663, 781, 1127 |
| DpnI | GATC | 4 cut(s) | 25, 78, 171, 1107 |
| DpnII | GATC | 4 cut(s) | 23, 76, 169, 1105 |
| DraI | TTTAAA | 1 cut(s) | 99 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 482 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 482 |
| EaeI | YGGCCR | 1 cut(s) | 193 |
| Eco31I | GGTCTC | 1 cut(s) | 331 |
| Eco47I | GGWCC | 2 cut(s) | 697, 946 |
| Eco57I | CTGAAG | 1 cut(s) | 1157 |
| Eco81I | CCTNAGG | 1 cut(s) | 1127 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 953 |
| EcoO109I | RGGNCCY | 2 cut(s) | 938, 946 |
| EcoRI | GAATTC | 2 cut(s) | 499, 1142 |
| EcoRII | CCWGG | 4 cut(s) | 135, 141, 204, 940 |
| FaeI | CATG | 3 cut(s) | 611, 740, 1195 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 561, 593 |
| FaqI | GGGAC | 1 cut(s) | 996 |
| FatI | CATG | 3 cut(s) | 607, 736, 1191 |
| FauI | CCCGC | 2 cut(s) | 347, 1152 |
| FbaI | TGATCA | 1 cut(s) | 1105 |
| FblI | GTMKAC | 1 cut(s) | 305 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 175, 187, 235, 390, 729, 786, 789, 1031 |
| FokI | GGATG | 4 cut(s) | 503, 633, 725, 845 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 175, 187, 235, 390, 729, 786, 789, 1031 |
| FspBI | CTAG | 3 cut(s) | 777, 929, 1166 |
| GlaI | GCGC | 2 cut(s) | 238, 960 |
| GluI | GCNGC | 9 cut(s) | 6, 175, 187, 235, 390, 729, 786, 789, 1031 |
| HaeII | RGCGCY | 2 cut(s) | 240, 962 |
| HaeIII | GGCC | 4 cut(s) | 140, 146, 195, 939 |
| HapII | CCGG | 1 cut(s) | 888 |
| HgaI | GACGC | 1 cut(s) | 968 |
| HhaI | GCGC | 2 cut(s) | 239, 961 |
| Hin1I | GRCGYC | 2 cut(s) | 8, 261 |
| Hin1II | CATG | 3 cut(s) | 611, 740, 1195 |
| Hin6I | GCGC | 2 cut(s) | 237, 959 |
| HinP1I | GCGC | 2 cut(s) | 237, 959 |
| HincII | GTYRAC | 2 cut(s) | 306, 681 |
| HindII | GTYRAC | 2 cut(s) | 306, 681 |
| HinfI | GANTC | 2 cut(s) | 383, 850 |
| HpaI | GTTAAC | 1 cut(s) | 681 |
| HpaII | CCGG | 1 cut(s) | 888 |
| Hpy166II | GTNNAC | 5 cut(s) | 306, 431, 475, 681, 1115 |
| Hpy188I | TCNGA | 8 cut(s) | 76, 160, 331, 701, 807, 1042, 1137, 1179 |
| Hpy188III | TCNNGA | 3 cut(s) | 221, 830, 907 |
| Hpy8I | GTNNAC | 5 cut(s) | 306, 431, 475, 681, 1115 |
| Hpy99I | CGWCG | 4 cut(s) | 194, 263, 266, 307 |
| HpyAV | CCTTC | 4 cut(s) | 250, 353, 929, 1132 |
| HpyCH4IV | ACGT | 3 cut(s) | 261, 463, 677 |
| HpyF3I | CTNAG | 6 cut(s) | 157, 542, 641, 663, 781, 1127 |
| HpySE526I | ACGT | 3 cut(s) | 261, 463, 677 |
| Hsp92I | GRCGYC | 2 cut(s) | 8, 261 |
| Hsp92II | CATG | 3 cut(s) | 611, 740, 1195 |
| HspAI | GCGC | 2 cut(s) | 237, 959 |
| Ksp22I | TGATCA | 1 cut(s) | 1105 |
| KspAI | GTTAAC | 1 cut(s) | 681 |
| Kzo9I | GATC | 4 cut(s) | 23, 76, 169, 1105 |
| LmnI | GCTCC | 3 cut(s) | 341, 371, 767 |
| Lsp1109I | GCAGC | 7 cut(s) | 186, 246, 376, 740, 775, 797, 1017 |
| LweI | GCATC | 5 cut(s) | 138, 525, 1046, 1103, 1141 |
| MabI | ACCWGGT | 1 cut(s) | 204 |
| MaeI | CTAG | 3 cut(s) | 777, 929, 1166 |
| MaeII | ACGT | 3 cut(s) | 261, 463, 677 |
| MaeIII | GTNAC | 2 cut(s) | 839, 847 |
| MalI | GATC | 4 cut(s) | 25, 78, 171, 1107 |
| MboI | GATC | 4 cut(s) | 23, 76, 169, 1105 |
| MboII | GAAGA | 3 cut(s) | 3, 143, 635 |
| MfeI | CAATTG | 1 cut(s) | 492 |
| MhlI | GDGCHC | 3 cut(s) | 220, 675, 1117 |
| MluCI | AATT | 6 cut(s) | 224, 319, 434, 492, 499, 1142 |
| MlyI | GAGTC | 1 cut(s) | 844 |
| MmeI | TCCRAC | 1 cut(s) | 190 |
| MnlI | CCTC | 6 cut(s) | 37, 76, 120, 206, 238, 925 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1142 |
| MseI | TTAA | 3 cut(s) | 98, 680, 954 |
| MspA1I | CMGCKG | 3 cut(s) | 389, 788, 1030 |
| MspI | CCGG | 1 cut(s) | 888 |
| MspR9I | CCNGG | 5 cut(s) | 137, 143, 206, 888, 942 |
| MunI | CAATTG | 1 cut(s) | 492 |
| MvaI | CCWGG | 4 cut(s) | 137, 143, 206, 942 |
| NciI | CCSGG | 1 cut(s) | 888 |
| NdeII | GATC | 4 cut(s) | 23, 76, 169, 1105 |
| NheI | GCTAGC | 1 cut(s) | 776 |
| NlaIII | CATG | 3 cut(s) | 611, 740, 1195 |
| NlaIV | GGNNCC | 2 cut(s) | 337, 947 |
| NmuCI | GTSAC | 2 cut(s) | 839, 847 |
| NspI | RCATGY | 1 cut(s) | 740 |
| PasI | CCCWGGG | 1 cut(s) | 941 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1142 |
| PfeI | GAWTC | 1 cut(s) | 383 |
| PkrI | GCNGC | 9 cut(s) | 7, 176, 188, 236, 391, 730, 787, 790, 1032 |
| Ple19I | CGATCG | 1 cut(s) | 172 |
| PleI | GAGTC | 1 cut(s) | 844 |
| PpsI | GAGTC | 1 cut(s) | 844 |
| PpuMI | RGGWCCY | 1 cut(s) | 946 |
| PshAI | GACNNNNGTC | 1 cut(s) | 298 |
| Psp1406I | AACGTT | 1 cut(s) | 463 |
| Psp5II | RGGWCCY | 1 cut(s) | 946 |
| Psp6I | CCWGG | 4 cut(s) | 135, 141, 204, 940 |
| PspGI | CCWGG | 4 cut(s) | 135, 141, 204, 940 |
| PspN4I | GGNNCC | 2 cut(s) | 337, 947 |
| PspPI | GGNCC | 4 cut(s) | 139, 697, 938, 946 |
| PspPPI | RGGWCCY | 1 cut(s) | 946 |
| PstI | CTGCAG | 1 cut(s) | 793 |
| PstNI | CAGNNNCTG | 2 cut(s) | 770, 788 |
| PvuI | CGATCG | 1 cut(s) | 172 |
| PvuII | CAGCTG | 2 cut(s) | 389, 788 |
| SalI | GTCGAC | 1 cut(s) | 304 |
| SaqAI | TTAA | 3 cut(s) | 98, 680, 954 |
| SatI | GCNGC | 9 cut(s) | 6, 175, 187, 235, 390, 729, 786, 789, 1031 |
| Sau3AI | GATC | 4 cut(s) | 23, 76, 169, 1105 |
| Sau96I | GGNCC | 4 cut(s) | 139, 697, 938, 946 |
| SchI | GAGTC | 1 cut(s) | 844 |
| ScrFI | CCNGG | 5 cut(s) | 137, 143, 206, 888, 942 |
| SduI | GDGCHC | 3 cut(s) | 220, 675, 1117 |
| SexAI | ACCWGGT | 1 cut(s) | 204 |
| SfaNI | GCATC | 5 cut(s) | 138, 525, 1046, 1103, 1141 |
| SfcI | CTRYAG | 1 cut(s) | 789 |
| SinI | GGWCC | 2 cut(s) | 697, 946 |
| Sse9I | AATT | 6 cut(s) | 224, 319, 434, 492, 499, 1142 |
| SsiI | CCGC | 8 cut(s) | 5, 186, 340, 392, 444, 1018, 1028, 1159 |
| SspMI | CTAG | 3 cut(s) | 777, 929, 1166 |
| StyD4I | CCNGG | 5 cut(s) | 135, 141, 204, 886, 940 |
| TaiI | ACGT | 3 cut(s) | 264, 466, 680 |
| TaqI | TCGA | 6 cut(s) | 59, 105, 222, 243, 269, 305 |
| TaqII | GACCGA | 1 cut(s) | 313 |
| TasI | AATT | 6 cut(s) | 224, 319, 434, 492, 499, 1142 |
| TauI | GCSGC | 2 cut(s) | 8, 189 |
| TfiI | GAWTC | 1 cut(s) | 383 |
| Tru1I | TTAA | 3 cut(s) | 98, 680, 954 |
| Tru9I | TTAA | 3 cut(s) | 98, 680, 954 |
| TscAI | CASTG | 3 cut(s) | 426, 671, 714 |
| TseFI | GTSAC | 2 cut(s) | 839, 847 |
| TseI | GCWGC | 7 cut(s) | 174, 234, 389, 728, 785, 788, 1030 |
| Tsp45I | GTSAC | 2 cut(s) | 839, 847 |
| TspDTI | ATGAA | 1 cut(s) | 492 |
| TspRI | CASTG | 3 cut(s) | 426, 671, 714 |
| VneI | GTGCAC | 1 cut(s) | 1113 |
| VpaK11BI | GGWCC | 2 cut(s) | 697, 946 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 953 |
| XapI | RAATTY | 2 cut(s) | 499, 1142 |
| XceI | RCATGY | 1 cut(s) | 740 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 691 |
| XmiI | GTMKAC | 1 cut(s) | 305 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1142 |
| XspI | CTAG | 3 cut(s) | 777, 929, 1166 |
| ZraI | GACGTC | 1 cut(s) | 262 |