AT3G08720

kinase protein binding protein kinase protein serine threonine kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
2648372 .. 2651231
2860 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G08720.3

Sequence Viewer

Length: 1416 bp
ATGGTTTCTTCTCAGTGTTCTGTTGCAAACAAAAACCAGACTGGGAAGCCGTTTCAGAAACATCTATCTTTATCCATCAGCCCTCCAAAATCTGTCTTGGGTGATAACCTTGAGCTTCAATTCTCTGATGTCTTTGGACCAATGCCTGAAGCTAACTCTGAAGAGGCCTGTGATGTTGCTTACGACGAGCCTGCTGTTGTCTACAGTCGATCCCACTCATTGGTTGGCCCGTCTTTGGTTGTTAGCCATTCTTTGAAGATGAACAAGCTCACTTTACGAGAAACTGAGGACTCAGTTGACTTGGTGGAGTGTGTTGAAGGTGAATCGATAAAAGAGAACGATGAATTCTCTGGTAATGATGACACTGACAGTGAGAAATCTCCAGAGGAGGTCTCAGGTGTAGTAGGCATTGAGGACTTTGAGGTATTGAAGGTTGTGGGACAAGGTGCATTTGGAAAAGTGTACCAGGTGAGGAAAAAAGACACGTCTGAGATATACGCGATGAAGGTCATGAGAAAAGATAAAATTGTTGAGAAGAATCATGCTGAATACATGAAAGCCGAGCGCGATATTCTAACCAAAATCGATCATCCTTTCATTGTGCAACTTAAATACTCTTTTCAGACCAAATACAGATTGTATCTTGTTCTTGACTTTATAAACGGAGGTCATCTTTTCTTCCAGCTCTATCACCAAGGGCTTTTCAGGGAGGACTTGGCTCGTGTGTACACTGCAGAAATCGTCTCTGCAGTTTCCCATCTCCATGAGAAAGGCATAATGCATAGAGATCTTAAACCTGAAAACATACTCATGGACGTAGATGGCCATGTGATGTTAACTGATTTTGGTTTAGCAAAAGAATTTGAAGAAAACACAAGATCAAACTCCATGTGTGGGACTACGGAGTATATGGCCCCTGAGATTGTTCGTGGAAAAGGACATGATAAGGCTGCCGACTGGTGGAGTGTAGGAATCCTTCTGTATGAGATGCTCACTGGAAAGCCGCCGTTTCTCGGGAGCAAAGGAAAGATACAGCAGAAAATCGTTAAGGACAAGATCAAGCTTCCACAGTTTCTGTCTAATGAAGCTCATGCCTTGCTGAAAGGGCTGCTGCAAAAAGAGCCAGAAAGGAGACTGGGAAGTGGACCGAGCGGAGCAGAGGAGATAAAAAAACACAAATGGTTCAAGGCGATAAACTGGAAGAAGCTGGAGGCTAGAGAAGTACAACCAAGTTTCAAGCCGGCGGTTTCGGGAAGACAATGCATAGCTAATTTTGACAAGTGTTGGACTGACATGTCTGTTTTGGATTCTCCAGCAAGTAGTCCCAACTCTGATGCTAAGGCGAACCCTTTTACAAACTTCACATACGTCAGGCCTCCTCATTCATTCCTTCATCGGACCACATCCAACTTGTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

471

Amino Acids

53.04

Weight (kDa)

6.27

Isoelectric Point (pI)

37.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 140 - 395 1.8e-79 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 141 - 378 1.5e-36 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 214 - 295 4e-07 ABC1 atypical kinase-like domain
Kinase-like PF14531 237 - 378 9.3e-10 Kinase-like
Pkinase_fungal PF17667 247 - 319 4.7e-08 Fungal protein kinase
Pkinase_C PF00433 416 - 456 4.1e-06 Protein kinase C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 659
AasI GACNNNNNNGTC 1 cut(s) 1294
AccB7I CCANNNNNTGG 1 cut(s) 220
AccBSI CCGCTC 1 cut(s) 1152
AccI GTMKAC 1 cut(s) 201
AccII CGCG 2 cut(s) 500, 567
AciI CCGC 3 cut(s) 1004, 1152, 1244
AclWI GGATC 1 cut(s) 204
AcoI YGGCCR 1 cut(s) 823
AcsI RAATTY 2 cut(s) 344, 860
AcuI CTGAAG 2 cut(s) 168, 180
AfaI GTAC 3 cut(s) 464, 728, 1224
AfiI CCNNNNNNNGG 5 cut(s) 220, 235, 894, 960, 1013
AflIII ACRYGT 2 cut(s) 483, 1293
AgsI TTSAA 7 cut(s) 119, 256, 317, 430, 866, 1186, 1237
AjiI CACGTC 1 cut(s) 486
AjnI CCWGG 1 cut(s) 465
AluBI AGCT 8 cut(s) 115, 152, 268, 685, 1063, 1088, 1207, 1268
AluI AGCT 8 cut(s) 115, 152, 268, 685, 1063, 1088, 1207, 1268
Alw26I GTCTC 3 cut(s) 397, 748, 1126
AlwI GGATC 1 cut(s) 204
AlwNI CAGNNNCTG 1 cut(s) 1075
Ama87I CYCGRG 1 cut(s) 1013
AoxI GGCC 5 cut(s) 165, 226, 823, 912, 1373
ApeKI GCWGC 3 cut(s) 950, 1108, 1111
ApoI RAATTY 2 cut(s) 344, 860
AspLEI GCGC 1 cut(s) 567
AspS9I GGNCC 5 cut(s) 137, 227, 913, 1145, 1398
AsuHPI GGTGA 4 cut(s) 113, 332, 481, 683
AvaI CYCGRG 1 cut(s) 1013
AvaII GGWCC 3 cut(s) 137, 1145, 1398
BalI TGGCCA 1 cut(s) 825
BarI GAAGNNNNNNTAC 2 cut(s) 960, 992
BauI CACGAG 1 cut(s) 720
BbsI GAAGAC 1 cut(s) 1261
BbvI GCAGC 3 cut(s) 937, 1095, 1098
BccI CCATC 3 cut(s) 83, 765, 815
BceAI ACGGC 2 cut(s) 34, 991
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 1 cut(s) 467
BcoDI GTCTC 3 cut(s) 397, 748, 1126
BfaI CTAG 1 cut(s) 1215
BfmI CTRYAG 3 cut(s) 202, 732, 747
BglII AGATCT 1 cut(s) 787
BisI GCNGC 4 cut(s) 951, 1004, 1109, 1112
BlsI GCNGC 4 cut(s) 952, 1005, 1110, 1113
Bme1390I CCNGG 1 cut(s) 467
Bme18I GGWCC 3 cut(s) 137, 1145, 1398
BmeT110I CYCGRG 1 cut(s) 1013
BmgBI CACGTC 1 cut(s) 486
BmgT120I GGNCC 5 cut(s) 137, 227, 913, 1145, 1398
BmiI GGNNCC 1 cut(s) 915
BmrFI CCNGG 1 cut(s) 467
BmrI ACTGGG 2 cut(s) 51, 1145
BmsI GCATC 2 cut(s) 978, 1324
BmuI ACTGGG 2 cut(s) 51, 1145
BpiI GAAGAC 1 cut(s) 1261
BplI GAGNNNNNCTC 2 cut(s) 377, 409
BpmI CTGGAG 3 cut(s) 366, 1229, 1296
Bpu10I CCTNAGC 1 cut(s) 1338
BpuEI CTTGAG 1 cut(s) 131
Bsa29I ATCGAT 2 cut(s) 326, 585
BsaI GGTCTC 1 cut(s) 397
BsaJI CCNNGG 1 cut(s) 694
Bsc4I CCNNNNNNNGG 5 cut(s) 220, 235, 894, 960, 1013
Bse118I RCCGGY 1 cut(s) 1240
Bse1I ACTGG 5 cut(s) 46, 962, 1000, 1140, 1202
BseBI CCWGG 1 cut(s) 467
BseCI ATCGAT 2 cut(s) 326, 585
BseDI CCNNGG 1 cut(s) 694
BseGI GGATG 2 cut(s) 589, 1403
BseLI CCNNNNNNNGG 5 cut(s) 220, 235, 894, 960, 1013
BseMII CTCAG 6 cut(s) 26, 276, 306, 408, 480, 909
BseNI ACTGG 5 cut(s) 46, 962, 1000, 1140, 1202
BseRI GAGGAG 3 cut(s) 401, 1175, 1368
BseXI GCAGC 3 cut(s) 937, 1095, 1098
Bsh1236I CGCG 2 cut(s) 500, 567
BshFI GGCC 5 cut(s) 167, 228, 825, 914, 1375
BshVI ATCGAT 2 cut(s) 326, 585
BsiHKCI CYCGRG 1 cut(s) 1013
BsiSI CCGG 1 cut(s) 1241
BslFI GGGAC 3 cut(s) 453, 910, 1308
BslI CCNNNNNNNGG 5 cut(s) 220, 235, 894, 960, 1013
BsmAI GTCTC 3 cut(s) 397, 748, 1126
BsmBI CGTCTC 1 cut(s) 748
BsmFI GGGAC 3 cut(s) 453, 910, 1308
BsnI GGCC 5 cut(s) 167, 228, 825, 914, 1375
Bso31I GGTCTC 1 cut(s) 397
BsoBI CYCGRG 1 cut(s) 1013
Bsp1407I TGTACA 1 cut(s) 726
Bsp143I GATC 5 cut(s) 209, 586, 787, 878, 1056
BspACI CCGC 3 cut(s) 1004, 1152, 1244
BspANI GGCC 5 cut(s) 167, 228, 825, 914, 1375
BspCNI CTCAG 6 cut(s) 25, 277, 305, 407, 481, 910
BspDI ATCGAT 2 cut(s) 326, 585
BspFNI CGCG 2 cut(s) 500, 567
BspHI TCATGA 1 cut(s) 510
BspLI GGNNCC 1 cut(s) 915
BspMAI CTGCAG 2 cut(s) 736, 751
BspPI GGATC 1 cut(s) 204
BspTNI GGTCTC 1 cut(s) 397
BsrBI CCGCTC 1 cut(s) 1152
BsrFI RCCGGY 1 cut(s) 1240
BsrGI TGTACA 1 cut(s) 726
BsrI ACTGG 5 cut(s) 46, 962, 1000, 1140, 1202
BssAI RCCGGY 1 cut(s) 1240
BssECI CCNNGG 1 cut(s) 694
BssMI GATC 5 cut(s) 209, 586, 787, 878, 1056
BssSI CACGAG 1 cut(s) 720
BssT1I CCWWGG 1 cut(s) 694
Bst2BI CACGAG 1 cut(s) 720
Bst2UI CCWGG 1 cut(s) 467
Bst4CI ACNGT 3 cut(s) 206, 371, 1071
Bst6I CTCTTC 1 cut(s) 156
BstAUI TGTACA 1 cut(s) 726
BstC8I GCNNGC 2 cut(s) 192, 1242
BstDEI CTNAG 7 cut(s) 12, 285, 292, 394, 489, 918, 1338
BstF5I GGATG 2 cut(s) 589, 1403
BstFNI CGCG 2 cut(s) 500, 567
BstHHI GCGC 1 cut(s) 567
BstKTI GATC 5 cut(s) 212, 589, 790, 881, 1059
BstMAI GTCTC 3 cut(s) 397, 748, 1126
BstMBI GATC 5 cut(s) 209, 586, 787, 878, 1056
BstMWI GCNNNNNNNGC 2 cut(s) 1105, 1120
BstNI CCWGG 1 cut(s) 467
BstNSI RCATGY 1 cut(s) 1297
BstSCI CCNGG 1 cut(s) 465
BstSFI CTRYAG 3 cut(s) 202, 732, 747
BstUI CGCG 2 cut(s) 500, 567
BstV1I GCAGC 3 cut(s) 937, 1095, 1098
BstV2I GAAGAC 1 cut(s) 1261
BstX2I RGATCY 1 cut(s) 787
BstYI RGATCY 1 cut(s) 787
Bsu15I ATCGAT 2 cut(s) 326, 585
BsuRI GGCC 5 cut(s) 167, 228, 825, 914, 1375
BsuTUI ATCGAT 2 cut(s) 326, 585
BtgZI GCGATG 1 cut(s) 515
BtrI CACGTC 1 cut(s) 486
BtsCI GGATG 2 cut(s) 589, 1403
BtsI GCAGTG 1 cut(s) 729
BtsIMutI CAGTG 5 cut(s) 20, 363, 376, 729, 993
Cac8I GCNNGC 2 cut(s) 192, 1242
CaiI CAGNNNCTG 1 cut(s) 1075
CciI TCATGA 1 cut(s) 510
CfoI GCGC 1 cut(s) 567
Cfr10I RCCGGY 1 cut(s) 1240
Cfr13I GGNCC 5 cut(s) 137, 227, 913, 1145, 1398
ClaI ATCGAT 2 cut(s) 326, 585
CsiI ACCWGGT 1 cut(s) 465
Csp6I GTAC 3 cut(s) 463, 727, 1223
CviQI GTAC 3 cut(s) 463, 727, 1223
DdeI CTNAG 7 cut(s) 12, 285, 292, 394, 489, 918, 1338
DpnI GATC 5 cut(s) 211, 588, 789, 880, 1058
DpnII GATC 5 cut(s) 209, 586, 787, 878, 1056
DrdI GACNNNNNNGTC 1 cut(s) 1294
DseDI GACNNNNNNGTC 1 cut(s) 1294
EaeI YGGCCR 1 cut(s) 823
Eam1104I CTCTTC 1 cut(s) 156
EarI CTCTTC 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 694
Eco147I AGGCCT 2 cut(s) 167, 1375
Eco31I GGTCTC 1 cut(s) 397
Eco47I GGWCC 3 cut(s) 137, 1145, 1398
Eco57I CTGAAG 2 cut(s) 168, 180
Eco88I CYCGRG 1 cut(s) 1013
EcoRI GAATTC 1 cut(s) 344
EcoRII CCWGG 1 cut(s) 465
EcoT14I CCWWGG 1 cut(s) 694
EcoT22I ATGCAT 2 cut(s) 783, 1265
ErhI CCWWGG 1 cut(s) 694
Esp3I CGTCTC 1 cut(s) 748
FaqI GGGAC 3 cut(s) 453, 910, 1308
FblI GTMKAC 1 cut(s) 201
Fnu4HI GCNGC 4 cut(s) 951, 1004, 1109, 1112
FokI GGATG 2 cut(s) 576, 1390
Fsp4HI GCNGC 4 cut(s) 951, 1004, 1109, 1112
FspBI CTAG 1 cut(s) 1215
GlaI GCGC 1 cut(s) 566
GluI GCNGC 4 cut(s) 951, 1004, 1109, 1112
GsuI CTGGAG 3 cut(s) 366, 1229, 1296
HaeIII GGCC 5 cut(s) 167, 228, 825, 914, 1375
HapII CCGG 1 cut(s) 1241
HhaI GCGC 1 cut(s) 567
Hin6I GCGC 1 cut(s) 565
HinP1I GCGC 1 cut(s) 565
HincII GTYRAC 2 cut(s) 298, 837
HindII GTYRAC 2 cut(s) 298, 837
HindIII AAGCTT 1 cut(s) 1061
HinfI GANTC 5 cut(s) 290, 323, 538, 972, 1307
HpaI GTTAAC 1 cut(s) 837
HpaII CCGG 1 cut(s) 1241
HphI GGTGA 4 cut(s) 113, 332, 481, 683
Hpy166II GTNNAC 7 cut(s) 202, 298, 463, 727, 729, 837, 1145
Hpy188I TCNGA 7 cut(s) 57, 127, 160, 490, 624, 1333, 1398
Hpy188III TCNNGA 5 cut(s) 383, 511, 650, 1015, 1251
Hpy8I GTNNAC 7 cut(s) 202, 298, 463, 727, 729, 837, 1145
Hpy99I CGWCG 1 cut(s) 188
HpyAV CCTTC 5 cut(s) 311, 424, 499, 986, 1400
HpyCH4III ACNGT 3 cut(s) 206, 371, 1071
HpyCH4IV ACGT 3 cut(s) 485, 816, 1368
HpyCH4V TGCA 8 cut(s) 26, 449, 604, 734, 749, 781, 1114, 1263
HpyF10VI GCNNNNNNNGC 2 cut(s) 1105, 1120
HpyF3I CTNAG 7 cut(s) 12, 285, 292, 394, 489, 918, 1338
HpySE526I ACGT 3 cut(s) 485, 816, 1368
HspAI GCGC 1 cut(s) 565
KroI GCCGGC 1 cut(s) 1240
KroNI GCCGGC 1 cut(s) 1242
KspAI GTTAAC 1 cut(s) 837
Kzo9I GATC 5 cut(s) 209, 586, 787, 878, 1056
LmnI GCTCC 2 cut(s) 1017, 1154
Lsp1109I GCAGC 3 cut(s) 937, 1095, 1098
LweI GCATC 2 cut(s) 978, 1324
MabI ACCWGGT 1 cut(s) 465
MaeI CTAG 1 cut(s) 1215
MaeII ACGT 3 cut(s) 485, 816, 1368
MalI GATC 5 cut(s) 211, 588, 789, 880, 1058
MbiI CCGCTC 1 cut(s) 1152
MboI GATC 5 cut(s) 209, 586, 787, 878, 1056
MboII GAAGA 7 cut(s) 173, 268, 547, 670, 878, 1213, 1266
MflI RGATCY 1 cut(s) 787
MlsI TGGCCA 1 cut(s) 825
MluCI AATT 5 cut(s) 119, 344, 525, 860, 1270
MluNI TGGCCA 1 cut(s) 825
MlyI GAGTC 1 cut(s) 284
MmeI TCCRAC 1 cut(s) 1265
Mox20I TGGCCA 1 cut(s) 825
Mph1103I ATGCAT 2 cut(s) 783, 1265
MroNI GCCGGC 1 cut(s) 1240
MscI TGGCCA 1 cut(s) 825
MseI TTAA 4 cut(s) 609, 792, 836, 1047
MslI CAYNNNNRTG 2 cut(s) 762, 809
Msp20I TGGCCA 1 cut(s) 825
MspI CCGG 1 cut(s) 1241
MspR9I CCNGG 1 cut(s) 467
MvaI CCWGG 1 cut(s) 467
MvnI CGCG 2 cut(s) 500, 567
MwoI GCNNNNNNNGC 2 cut(s) 1105, 1120
NaeI GCCGGC 1 cut(s) 1242
NdeII GATC 5 cut(s) 209, 586, 787, 878, 1056
NgoMIV GCCGGC 1 cut(s) 1240
NlaIV GGNNCC 1 cut(s) 915
NmeAIII GCCGAG 1 cut(s) 586
NsiI ATGCAT 2 cut(s) 783, 1265
NspI RCATGY 1 cut(s) 1297
PagI TCATGA 1 cut(s) 510
PceI AGGCCT 2 cut(s) 167, 1375
PciI ACATGT 1 cut(s) 1293
PdiI GCCGGC 1 cut(s) 1242
PfeI GAWTC 4 cut(s) 323, 538, 972, 1307
PflMI CCANNNNNTGG 1 cut(s) 220
PkrI GCNGC 4 cut(s) 952, 1005, 1110, 1113
PleI GAGTC 1 cut(s) 284
PpsI GAGTC 1 cut(s) 284
PscI ACATGT 1 cut(s) 1293
PsiI TTATAA 1 cut(s) 659
Psp6I CCWGG 1 cut(s) 465
PspGI CCWGG 1 cut(s) 465
PspN4I GGNNCC 1 cut(s) 915
PspPI GGNCC 5 cut(s) 137, 227, 913, 1145, 1398
PstI CTGCAG 2 cut(s) 736, 751
PstNI CAGNNNCTG 1 cut(s) 1075
PsuI RGATCY 1 cut(s) 787
RsaI GTAC 3 cut(s) 464, 728, 1224
RsaNI GTAC 3 cut(s) 463, 727, 1223
RseI CAYNNNNRTG 2 cut(s) 762, 809
SaqAI TTAA 4 cut(s) 609, 792, 836, 1047
SatI GCNGC 4 cut(s) 951, 1004, 1109, 1112
Sau3AI GATC 5 cut(s) 209, 586, 787, 878, 1056
Sau96I GGNCC 5 cut(s) 137, 227, 913, 1145, 1398
SchI GAGTC 1 cut(s) 284
ScrFI CCNGG 1 cut(s) 467
SexAI ACCWGGT 1 cut(s) 465
SfaNI GCATC 2 cut(s) 978, 1324
SfcI CTRYAG 3 cut(s) 202, 732, 747
SinI GGWCC 3 cut(s) 137, 1145, 1398
SmiMI CAYNNNNRTG 2 cut(s) 762, 809
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
Sse9I AATT 5 cut(s) 119, 344, 525, 860, 1270
SseBI AGGCCT 2 cut(s) 167, 1375
SsiI CCGC 3 cut(s) 1004, 1152, 1244
SspMI CTAG 1 cut(s) 1215
StuI AGGCCT 2 cut(s) 167, 1375
StyD4I CCNGG 1 cut(s) 465
StyI CCWWGG 1 cut(s) 694
TaaI ACNGT 3 cut(s) 206, 371, 1071
TaiI ACGT 3 cut(s) 488, 819, 1371
TaqI TCGA 3 cut(s) 208, 326, 585
TaqII GACCGA 1 cut(s) 1162
TasI AATT 5 cut(s) 119, 344, 525, 860, 1270
TatI WGTACW 2 cut(s) 726, 1222
TauI GCSGC 1 cut(s) 1006
TfiI GAWTC 4 cut(s) 323, 538, 972, 1307
Tru1I TTAA 4 cut(s) 609, 792, 836, 1047
Tru9I TTAA 4 cut(s) 609, 792, 836, 1047
TscAI CASTG 5 cut(s) 20, 370, 376, 736, 1000
TseI GCWGC 3 cut(s) 950, 1108, 1111
TspDTI ATGAA 8 cut(s) 275, 357, 518, 569, 586, 1098, 1374, 1382
TspGWI ACGGA 2 cut(s) 678, 917
TspRI CASTG 5 cut(s) 20, 370, 376, 736, 1000
Van91I CCANNNNNTGG 1 cut(s) 220
VpaK11BI GGWCC 3 cut(s) 137, 1145, 1398
XapI RAATTY 2 cut(s) 344, 860
XceI RCATGY 1 cut(s) 1297
XcmI CCANNNNNNNNNTGG 1 cut(s) 221
XmiI GTMKAC 1 cut(s) 201
XspI CTAG 1 cut(s) 1215
Zsp2I ATGCAT 2 cut(s) 783, 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.