MD12G1190400.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
27318629 .. 27322875
4247 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1190400.v1.1.491

Sequence Viewer

Length: 1443 bp
ATGGTTTCCTCTCAGCTACCTGGTTTGACCAAGGCCCCCATGTGCAAACCAATTCAGACCCAGTTGCTTTTCCCCATGGAAACAGTGGATGCTGCAGCTTCAGATCACCTCGAGCTTGATTTTGATGATGTGTTTGGCCCTCTACCGGTTCCGATCTCAGTAGAAGTGAATTCGGCTAATTTTGCCTCGACTGAAGATGCTACTGAGCTTATTTATGACGATCCAGTGGTTATTCACAACCGATCACATTCGTTGGTTGGTCCCTCATCGTTTGTAAACCAATCATTGAAGCTCAGCAAACTGACTATAAGTGACACAGAAGATTCAGTGGAACTGGTAGAATGTGTCAAAGGAGATACCATCAAAGAATTTCAGGAACCTTTTATTGTTGATGGTGTCAACGAAAAGCCTCTTGAAATTATTGACGAGAACCCCATGAAGATCGAGAGTGTAGGCATTGAAGATTTTGAGGTTTTGAAGGTTGTTGGACAGGGTGCATTTGCAAAAGTATATCAGGTTAGGAAGAAGGGGACATCAGAAATATATGCAATGAAGGTCATGCGGAAGGACAAGATCATGGAGAAAAATCATGCCGAATACATGAAAGCTGAGAGGGATATTTTAACAAAAATCGATCATCCATTCATTATCCAACTTAGATACTCATTTCAGACCAAATATAGACTATATCTTGTGCTGGATTTTGTTAATGGTGGTCACCTTTTCTTTCAGCTCTATCACCATGGCCTTTTTAGAGAGGAGCTGGGACGAATATATGCAGCTGAAATTGTTTCTGCAGTTGCTCACCTCCATGCAAATGGAATAATGCATAGGGATCTTAAACCTGAAAATATCCTATTGGACTCAGATGGCCATGCCATGTTGACTGATTTTGGTCTTGCAAAGCAACTTGAGGAGAATACAAGATCTAATTCCATGTGTGGAACTGTGGAATACATGCCACCCGAAATAGTTCTTGGAAAGGGCCACGATAAGGCTGCAGACTGGTGGAGTGTGGGAGTCCTAATGTTTGAGATGCTTACCGGAAAGCCTCCTTTTACTGGGAACAGGGAGAAAATTCAGCAGAAGATAGTTAAGGAAAAGATCAAGTTGCCATCCTTTTTGTCAAGTGAAGCACATTCTTTGTTGAAAGCGCTGCTACATAAGGATCCAAGCAAGCGCCTTGGCAGTGGGCCTTTGGGGAGTGAGGACATCAAGCGCCACAAATGGTTCAAGCCAATAAATTGGAAAAAACTGGACTCTCGGCAAATCCAACCAAGCTTTCGTCCTGAAGTTGCTGGGAAGCATTGCATTGCCAATTTTGACAAGTGCTGGACTGACATGTCAGTTGTGGATTCCCCAGCTGCTAGCCCGAATGCTGCTGGAAACCCCTTCACCGGCTTCAGTTATGTTAGGCCGGCCTCCTCTTTTCTCCAGAAATAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

481

Amino Acids

53.92

Weight (kDa)

6.12

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 156 - 411 4.7e-77 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 157 - 394 5.7e-36 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 230 - 311 1e-06 ABC1 atypical kinase-like domain
Kinase-like PF14531 261 - 390 1.8e-09 Kinase-like
Pkinase_fungal PF17667 263 - 335 9.2e-07 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1342
AciI CCGC 1 cut(s) 562
AclWI GGATC 4 cut(s) 215, 843, 1163, 1176
AcoI YGGCCR 1 cut(s) 871
AcsI RAATTY 3 cut(s) 169, 368, 1077
AcuI CTGAAG 4 cut(s) 84, 213, 1311, 1387
AfeI AGCGCT 1 cut(s) 1155
AfiI CCNNNNNNNGG 4 cut(s) 145, 994, 1061, 1397
AflIII ACRYGT 1 cut(s) 1341
AgeI ACCGGT 1 cut(s) 145
AgsI TTSAA 6 cut(s) 289, 416, 461, 478, 1150, 1234
AjnI CCWGG 1 cut(s) 19
AjuI GAANNNNNNNTTGG 4 cut(s) 960, 992, 1266, 1298
AlwI GGATC 4 cut(s) 215, 843, 1163, 1176
Ama87I CYCGRG 1 cut(s) 110
Aor51HI AGCGCT 1 cut(s) 1155
AoxI GGCC 8 cut(s) 33, 136, 745, 871, 985, 1193, 1415, 1419
ApeKI GCWGC 7 cut(s) 92, 95, 779, 998, 1156, 1364, 1379
ApoI RAATTY 3 cut(s) 169, 368, 1077
AsiGI ACCGGT 1 cut(s) 145
Asp700I GAANNNNTTC 1 cut(s) 972
AspLEI GCGC 3 cut(s) 1156, 1182, 1221
AspS9I GGNCC 5 cut(s) 34, 137, 260, 985, 1193
AsuHPI GGTGA 5 cut(s) 98, 710, 731, 797, 1387
AsuNHI GCTAGC 1 cut(s) 1367
AvaI CYCGRG 1 cut(s) 110
AvaII GGWCC 1 cut(s) 260
BalI TGGCCA 1 cut(s) 873
BamHI GGATCC 1 cut(s) 1168
BbvI GCAGC 7 cut(s) 79, 107, 791, 985, 1143, 1351, 1366
BccI CCATC 4 cut(s) 368, 386, 863, 1123
BcgI CGANNNNNNTGC 2 cut(s) 980, 1014
BciT130I CCWGG 1 cut(s) 21
BfaI CTAG 1 cut(s) 1368
BfmI CTRYAG 3 cut(s) 93, 795, 999
BfoI RGCGCY 3 cut(s) 1157, 1183, 1222
BglII AGATCT 1 cut(s) 926
BisI GCNGC 7 cut(s) 93, 96, 780, 999, 1157, 1365, 1380
BlpI GCTNAGC 1 cut(s) 293
BlsI GCNGC 7 cut(s) 94, 97, 781, 1000, 1158, 1366, 1381
Bme1390I CCNGG 1 cut(s) 21
Bme18I GGWCC 1 cut(s) 260
BmeT110I CYCGRG 1 cut(s) 110
BmgT120I GGNCC 5 cut(s) 34, 137, 260, 985, 1193
BmiI GGNNCC 5 cut(s) 36, 150, 262, 378, 1170
BmrFI CCNGG 1 cut(s) 21
BmrI ACTGGG 2 cut(s) 55, 1071
BmsI GCATC 3 cut(s) 79, 187, 1026
BmtI GCTAGC 1 cut(s) 1371
BmuI ACTGGG 2 cut(s) 55, 1071
BpmI CTGGAG 1 cut(s) 1418
Bpu1102I GCTNAGC 1 cut(s) 293
BpuEI CTTGAG 1 cut(s) 932
Bsa29I ATCGAT 1 cut(s) 633
BsaJI CCNNGG 4 cut(s) 30, 75, 742, 1183
BsaWI WCCGGW 2 cut(s) 145, 1043
Bsc4I CCNNNNNNNGG 4 cut(s) 145, 994, 1061, 1397
Bse118I RCCGGY 3 cut(s) 145, 1397, 1417
Bse1I ACTGG 6 cut(s) 61, 224, 339, 1010, 1066, 1260
Bse3DI GCAATG 3 cut(s) 555, 1306, 1311
BseBI CCWGG 1 cut(s) 21
BseCI ATCGAT 1 cut(s) 633
BseDI CCNNGG 4 cut(s) 30, 75, 742, 1183
BseGI GGATG 3 cut(s) 94, 637, 1115
BseLI CCNNNNNNNGG 4 cut(s) 145, 994, 1061, 1397
BseMI GCAATG 3 cut(s) 555, 1306, 1311
BseMII CTCAG 6 cut(s) 26, 171, 195, 307, 600, 879
BseNI ACTGG 6 cut(s) 61, 224, 339, 1010, 1066, 1260
BseRI GAGGAG 3 cut(s) 773, 929, 1414
BseXI GCAGC 7 cut(s) 79, 107, 791, 985, 1143, 1351, 1366
BseYI CCCAGC 3 cut(s) 763, 1298, 1360
BshFI GGCC 8 cut(s) 35, 138, 747, 873, 987, 1195, 1417, 1421
BshTI ACCGGT 1 cut(s) 145
BshVI ATCGAT 1 cut(s) 633
BsiHKCI CYCGRG 1 cut(s) 110
BsiSI CCGG 4 cut(s) 146, 1044, 1398, 1418
BslFI GGGAC 3 cut(s) 246, 544, 780
BslI CCNNNNNNNGG 4 cut(s) 145, 994, 1061, 1397
BsmFI GGGAC 3 cut(s) 246, 544, 780
BsmI GAATGC 1 cut(s) 1381
BsnI GGCC 8 cut(s) 35, 138, 747, 873, 987, 1195, 1417, 1421
BsoBI CYCGRG 1 cut(s) 110
Bsp1720I GCTNAGC 1 cut(s) 293
Bsp19I CCATGG 2 cut(s) 75, 742
BspACI CCGC 1 cut(s) 562
BspANI GGCC 8 cut(s) 35, 138, 747, 873, 987, 1195, 1417, 1421
BspCNI CTCAG 6 cut(s) 25, 170, 196, 306, 601, 878
BspDI ATCGAT 1 cut(s) 633
BspLI GGNNCC 5 cut(s) 36, 150, 262, 378, 1170
BspMAI CTGCAG 3 cut(s) 97, 799, 1003
BspOI GCTAGC 1 cut(s) 1371
BspPI GGATC 4 cut(s) 215, 843, 1163, 1176
BsrDI GCAATG 3 cut(s) 555, 1306, 1311
BsrFI RCCGGY 3 cut(s) 145, 1397, 1417
BsrI ACTGG 6 cut(s) 61, 224, 339, 1010, 1066, 1260
BssAI RCCGGY 3 cut(s) 145, 1397, 1417
BssECI CCNNGG 4 cut(s) 30, 75, 742, 1183
BssT1I CCWWGG 4 cut(s) 30, 75, 742, 1183
Bst2UI CCWGG 1 cut(s) 21
Bst4CI ACNGT 2 cut(s) 85, 949
BstC8I GCNNGC 3 cut(s) 1178, 1369, 1419
BstDEI CTNAG 7 cut(s) 12, 157, 204, 293, 609, 656, 865
BstDSI CCRYGG 2 cut(s) 75, 742
BstEII GGTNACC 1 cut(s) 716
BstF5I GGATG 3 cut(s) 94, 637, 1115
BstH2I RGCGCY 3 cut(s) 1157, 1183, 1222
BstHHI GCGC 3 cut(s) 1156, 1182, 1221
BstMWI GCNNNNNNNGC 1 cut(s) 182
BstNI CCWGG 1 cut(s) 21
BstNSI RCATGY 2 cut(s) 961, 1345
BstPI GGTNACC 1 cut(s) 716
BstSCI CCNGG 1 cut(s) 19
BstSFI CTRYAG 3 cut(s) 93, 795, 999
BstV1I GCAGC 7 cut(s) 79, 107, 791, 985, 1143, 1351, 1366
BstX2I RGATCY 3 cut(s) 835, 926, 1168
BstXI CCANNNNNNTGG 2 cut(s) 818, 1245
BstYI RGATCY 3 cut(s) 835, 926, 1168
Bsu15I ATCGAT 1 cut(s) 633
BsuRI GGCC 8 cut(s) 35, 138, 747, 873, 987, 1195, 1417, 1421
BsuTUI ATCGAT 1 cut(s) 633
BtgI CCRYGG 2 cut(s) 75, 742
BtsCI GGATG 3 cut(s) 94, 637, 1115
BtsI GCAGTG 1 cut(s) 1195
BtsIMutI CAGTG 4 cut(s) 90, 231, 333, 1195
Cac8I GCNNGC 3 cut(s) 1178, 1369, 1419
CfoI GCGC 3 cut(s) 1156, 1182, 1221
Cfr10I RCCGGY 3 cut(s) 145, 1397, 1417
Cfr13I GGNCC 5 cut(s) 34, 137, 260, 985, 1193
ClaI ATCGAT 1 cut(s) 633
CsiI ACCWGGT 1 cut(s) 19
CspAI ACCGGT 1 cut(s) 145
DdeI CTNAG 7 cut(s) 12, 157, 204, 293, 609, 656, 865
DrdI GACNNNNNNGTC 1 cut(s) 1342
DseDI GACNNNNNNGTC 1 cut(s) 1342
EaeI YGGCCR 1 cut(s) 871
Eco130I CCWWGG 4 cut(s) 30, 75, 742, 1183
Eco47I GGWCC 1 cut(s) 260
Eco47III AGCGCT 1 cut(s) 1155
Eco57I CTGAAG 4 cut(s) 84, 213, 1311, 1387
Eco88I CYCGRG 1 cut(s) 110
Eco91I GGTNACC 1 cut(s) 716
EcoO109I RGGNCCY 1 cut(s) 34
EcoO65I GGTNACC 1 cut(s) 716
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 1 cut(s) 19
EcoT14I CCWWGG 4 cut(s) 30, 75, 742, 1183
EcoT22I ATGCAT 1 cut(s) 831
ErhI CCWWGG 4 cut(s) 30, 75, 742, 1183
FaqI GGGAC 3 cut(s) 246, 544, 780
Fnu4HI GCNGC 7 cut(s) 93, 96, 780, 999, 1157, 1365, 1380
FokI GGATG 3 cut(s) 101, 624, 1102
FseI GGCCGGCC 1 cut(s) 1421
Fsp4HI GCNGC 7 cut(s) 93, 96, 780, 999, 1157, 1365, 1380
FspBI CTAG 1 cut(s) 1368
GlaI GCGC 3 cut(s) 1155, 1181, 1220
GluI GCNGC 7 cut(s) 93, 96, 780, 999, 1157, 1365, 1380
GsaI CCCAGC 3 cut(s) 767, 1302, 1364
GsuI CTGGAG 1 cut(s) 1418
HaeII RGCGCY 3 cut(s) 1157, 1183, 1222
HaeIII GGCC 8 cut(s) 35, 138, 747, 873, 987, 1195, 1417, 1421
HapII CCGG 4 cut(s) 146, 1044, 1398, 1418
HhaI GCGC 3 cut(s) 1156, 1182, 1221
Hin6I GCGC 3 cut(s) 1154, 1180, 1219
HinP1I GCGC 3 cut(s) 1154, 1180, 1219
HincII GTYRAC 2 cut(s) 400, 885
HindII GTYRAC 2 cut(s) 400, 885
HindIII AAGCTT 1 cut(s) 1279
HinfI GANTC 5 cut(s) 323, 863, 1020, 1259, 1355
HpaII CCGG 4 cut(s) 146, 1044, 1398, 1418
HphI GGTGA 5 cut(s) 98, 710, 731, 797, 1387
Hpy166II GTNNAC 3 cut(s) 277, 400, 885
Hpy188I TCNGA 6 cut(s) 57, 103, 153, 538, 672, 868
Hpy188III TCNNGA 5 cut(s) 374, 413, 445, 1289, 1435
Hpy8I GTNNAC 3 cut(s) 277, 400, 885
HpyAV CCTTC 5 cut(s) 472, 520, 547, 559, 1402
HpyCH4III ACNGT 2 cut(s) 85, 949
HpyF10VI GCNNNNNNNGC 1 cut(s) 182
HpyF3I CTNAG 7 cut(s) 12, 157, 204, 293, 609, 656, 865
HspAI GCGC 3 cut(s) 1154, 1180, 1219
KroI GCCGGC 1 cut(s) 1417
KroNI GCCGGC 1 cut(s) 1419
LmnI GCTCC 1 cut(s) 760
Lsp1109I GCAGC 7 cut(s) 79, 107, 791, 985, 1143, 1351, 1366
LweI GCATC 3 cut(s) 79, 187, 1026
MabI ACCWGGT 1 cut(s) 19
MaeI CTAG 1 cut(s) 1368
MaeIII GTNAC 2 cut(s) 311, 716
MboII GAAGA 6 cut(s) 206, 332, 451, 473, 535, 1099
MflI RGATCY 3 cut(s) 835, 926, 1168
MlsI TGGCCA 1 cut(s) 873
MluNI TGGCCA 1 cut(s) 873
MlyI GAGTC 3 cut(s) 857, 1029, 1253
MmeI TCCRAC 3 cut(s) 466, 676, 1297
Mox20I TGGCCA 1 cut(s) 873
Mph1103I ATGCAT 1 cut(s) 831
MroNI GCCGGC 1 cut(s) 1417
MroXI GAANNNNTTC 1 cut(s) 972
MscI TGGCCA 1 cut(s) 873
MseI TTAA 4 cut(s) 623, 708, 840, 1095
MslI CAYNNNNRTG 2 cut(s) 810, 816
Msp20I TGGCCA 1 cut(s) 873
MspA1I CMGCKG 2 cut(s) 782, 1364
MspI CCGG 4 cut(s) 146, 1044, 1398, 1418
MspR9I CCNGG 1 cut(s) 21
Mva1269I GAATGC 1 cut(s) 1381
MvaI CCWGG 1 cut(s) 21
MwoI GCNNNNNNNGC 1 cut(s) 182
NaeI GCCGGC 1 cut(s) 1419
NcoI CCATGG 2 cut(s) 75, 742
NgoMIV GCCGGC 1 cut(s) 1417
NheI GCTAGC 1 cut(s) 1367
NlaIV GGNNCC 5 cut(s) 36, 150, 262, 378, 1170
NmeAIII GCCGAG 1 cut(s) 1243
NmuCI GTSAC 2 cut(s) 311, 716
NsiI ATGCAT 1 cut(s) 831
NspI RCATGY 2 cut(s) 961, 1345
PaeR7I CTCGAG 1 cut(s) 110
PciI ACATGT 1 cut(s) 1341
PctI GAATGC 1 cut(s) 1381
PdiI GCCGGC 1 cut(s) 1419
PdmI GAANNNNTTC 1 cut(s) 972
PfeI GAWTC 2 cut(s) 323, 1355
PinAI ACCGGT 1 cut(s) 145
PkrI GCNGC 7 cut(s) 94, 97, 781, 1000, 1158, 1366, 1381
PleI GAGTC 3 cut(s) 857, 1028, 1253
PpsI GAGTC 3 cut(s) 857, 1028, 1253
PscI ACATGT 1 cut(s) 1341
Psp6I CCWGG 1 cut(s) 19
PspEI GGTNACC 1 cut(s) 716
PspFI CCCAGC 3 cut(s) 763, 1298, 1360
PspGI CCWGG 1 cut(s) 19
PspN4I GGNNCC 5 cut(s) 36, 150, 262, 378, 1170
PspPI GGNCC 5 cut(s) 34, 137, 260, 985, 1193
PspXI VCTCGAGB 1 cut(s) 110
PstI CTGCAG 3 cut(s) 97, 799, 1003
PsuI RGATCY 3 cut(s) 835, 926, 1168
PvuII CAGCTG 2 cut(s) 782, 1364
RigI GGCCGGCC 1 cut(s) 1421
RseI CAYNNNNRTG 2 cut(s) 810, 816
SaqAI TTAA 4 cut(s) 623, 708, 840, 1095
SatI GCNGC 7 cut(s) 93, 96, 780, 999, 1157, 1365, 1380
Sau96I GGNCC 5 cut(s) 34, 137, 260, 985, 1193
SchI GAGTC 3 cut(s) 857, 1029, 1253
ScrFI CCNGG 1 cut(s) 21
SexAI ACCWGGT 1 cut(s) 19
SfaNI GCATC 3 cut(s) 79, 187, 1026
SfcI CTRYAG 3 cut(s) 93, 795, 999
Sfr274I CTCGAG 1 cut(s) 110
SinI GGWCC 1 cut(s) 260
SlaI CTCGAG 1 cut(s) 110
SmiMI CAYNNNNRTG 2 cut(s) 810, 816
SmlI CTYRAG 2 cut(s) 110, 911
SmoI CTYRAG 2 cut(s) 110, 911
SsiI CCGC 1 cut(s) 562
SspMI CTAG 1 cut(s) 1368
StyD4I CCNGG 1 cut(s) 19
StyI CCWWGG 4 cut(s) 30, 75, 742, 1183
TaaI ACNGT 2 cut(s) 85, 949
TaqI TCGA 4 cut(s) 111, 188, 444, 633
TfiI GAWTC 2 cut(s) 323, 1355
Tru1I TTAA 4 cut(s) 623, 708, 840, 1095
Tru9I TTAA 4 cut(s) 623, 708, 840, 1095
TscAI CASTG 4 cut(s) 90, 231, 333, 1195
TseFI GTSAC 2 cut(s) 311, 716
TseI GCWGC 7 cut(s) 92, 95, 779, 998, 1156, 1364, 1379
Tsp45I GTSAC 2 cut(s) 311, 716
TspDTI ATGAA 4 cut(s) 452, 566, 617, 634
TspRI CASTG 4 cut(s) 90, 231, 333, 1195
VpaK11BI GGWCC 1 cut(s) 260
XapI RAATTY 3 cut(s) 169, 368, 1077
XceI RCATGY 2 cut(s) 961, 1345
XcmI CCANNNNNNNNNTGG 1 cut(s) 82
XhoI CTCGAG 1 cut(s) 110
XmnI GAANNNNTTC 1 cut(s) 972
XspI CTAG 1 cut(s) 1368
Zsp2I ATGCAT 1 cut(s) 831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.