Rh6AG323100

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
52293525 .. 52295371
1847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG323100.1

Sequence Viewer

Length: 1392 bp
ATGGTTTTCAGACCCGAGTGCAAACCAATTCAGACTCGGTTGCATTTTCCAATTTGCATGATGGATGCTGTAGTTCCGCATCAAGTTGAGCATGACTTTTCAGATGTATTTGGTCCTGTACCAGTCCAGACGCCAGTGGATTCAACTAATTCTGCCTCTCTCCAAGATAGTACGGATCCCGTATTCATTCACAACCGGTCACACTCTTTGATTGGTCCTTCATTCTATGTAAGCCAATCACTGAACCTCAACAAACTGACTATTTATAACACAGAAGATTCAGTGGACCTAGCAGAGTACTGTCTCCATGAAGAAACCATCAAAGAATCTCAGGAACCTTTTGTTGGTGACCCTGTCATTGGGCATCCTCTAGAAAATGTTGAAGAGAGTTTCTTGAAGAGTGAGAGTGTAGGCATCGAAGATTTTGAGGTTTTGAAGATTGTTGGGCAGGGTGGATTTGCAAAAGTATATCAGGTGAGGAAGAAGGGAACCTCGGAAATATACGCGATGAAGGTAATGCGAAAGGACAAGATCATGAAGAATAATCTTGCTGAATACATGAAATTTGAGAGGGATATATTAACAAAAGTTGATCATCCATTCATTGTCAAGCTTAGATACTCATTCCAAACCAAATACAGACTATATCTTGTGCTGGATTTTGTCAACGGAGGTCAGCTTTTCTTTCAACTCTACCACCATGGCCTTTTTTTGGAGGAGCAGGCACGAATATATGCAGCCGAGATTGTTTCTGCGGTGTCTCACCTTCATTCAAATGGCATAATGCATAGAGATCTTAAGCCTGAAAATATCCTATTGGATGCAGATGGCCATGCCATTTTAACTGATTTTGGGCTTGCGAAGAGCTTTGACGAAAACACGAGGTCTAATTCTCTATGTGGAACTGTAGAATACATGGCACCGGAAATAGTTCAGGGAAATGGCCATGATAAGGCAGCAGATTGGTGGAGTGTGGGAGTTGTATTGTTTCAGATGCTTACTGGCAAGCTTCCTTTTACTGGGAACCGTCAGAAATGTCAAGAGAAGATAGTAAAGGAGAAAATCAAGTTGCCAAGTTTTTTGTCAAGTGAAGCACATTCGCTGTTGAAAGGCTTGTTAGCGAAGGACACAAGCAAGCGCCTAGGTTGTGGACCTCTGGGAGGTGATGAAGTCAAGCAGCACAAATGGTTCAAGCAAATTAATTGGAAGAAATTGGATGCTCGTGAAATCAAACCGAGCTTCCGACCTAACGTTCCCGGGCAGCACTGCATTGCCAACATTGAGAATTACTGGACTGACATGCCACTTGTGGACTCCCCGGCTGCTAGTCCGAAGGCTTCGTCTGGAAATCCCTTCTCCGGCTTTAGTTATGTTAGGTCTGCAGCCTCTTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

463

Amino Acids

52.19

Weight (kDa)

6.42

Isoelectric Point (pI)

42.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 142 - 397 2.9e-75 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 144 - 380 7e-34 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 217 - 297 4.1e-06 ABC1 atypical kinase-like domain
Kinase-like PF14531 238 - 380 3.5e-09 Kinase-like
Pkinase_fungal PF17667 250 - 329 8.2e-08 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 267
AccB1I GGYRCC 1 cut(s) 919
AccII CGCG 1 cut(s) 506
AciI CCGC 2 cut(s) 77, 755
AclI AACGTT 1 cut(s) 1251
AclWI GGATC 2 cut(s) 170, 183
AcoI YGGCCR 2 cut(s) 829, 943
AcsI RAATTY 1 cut(s) 563
AcyI GRCGYC 1 cut(s) 131
AfaI GTAC 3 cut(s) 120, 172, 299
AfiI CCNNNNNNNGG 7 cut(s) 344, 359, 712, 952, 1019, 1160, 1358
AflII CTTAAG 1 cut(s) 797
AgeI ACCGGT 1 cut(s) 195
AgsI TTSAA 8 cut(s) 144, 383, 397, 436, 689, 774, 1108, 1192
AjuI GAANNNNNNNTTGG 2 cut(s) 327, 359
AluBI AGCT 5 cut(s) 613, 679, 867, 1009, 1239
AluI AGCT 5 cut(s) 613, 679, 867, 1009, 1239
Alw26I GTCTC 2 cut(s) 308, 765
AlwI GGATC 2 cut(s) 170, 183
Ama87I CYCGRG 2 cut(s) 14, 1256
AoxI GGCC 3 cut(s) 703, 829, 943
ApeKI GCWGC 6 cut(s) 737, 956, 1177, 1261, 1322, 1382
ApoI RAATTY 1 cut(s) 563
ArsI GACNNNNNNTTYG 2 cut(s) 1325, 1357
AseI ATTAAT 1 cut(s) 1200
AsiGI ACCGGT 1 cut(s) 195
Asp700I GAANNNNTTC 1 cut(s) 930
AspA2I CCTAGG 1 cut(s) 1141
AspLEI GCGC 1 cut(s) 1140
AspS9I GGNCC 4 cut(s) 113, 215, 286, 1151
AsuC2I CCSGG 3 cut(s) 1257, 1258, 1319
AsuHPI GGTGA 4 cut(s) 359, 487, 755, 1175
AvaI CYCGRG 2 cut(s) 14, 1256
AvaII GGWCC 4 cut(s) 113, 215, 286, 1151
AvrII CCTAGG 1 cut(s) 1141
BalI TGGCCA 2 cut(s) 831, 945
BamHI GGATCC 1 cut(s) 175
BanI GGYRCC 1 cut(s) 919
BauI CACGAG 2 cut(s) 880, 1221
BbvI GCAGC 5 cut(s) 749, 968, 1189, 1273, 1309
BccI CCATC 3 cut(s) 55, 326, 821
BclI TGATCA 1 cut(s) 592
BcnI CCSGG 3 cut(s) 1257, 1258, 1319
BcoDI GTCTC 2 cut(s) 308, 765
BfaI CTAG 4 cut(s) 290, 371, 1142, 1326
BfmI CTRYAG 3 cut(s) 69, 906, 1380
BfoI RGCGCY 1 cut(s) 1141
BfrI CTTAAG 1 cut(s) 797
BglII AGATCT 1 cut(s) 793
BisI GCNGC 6 cut(s) 738, 957, 1178, 1262, 1323, 1383
BlnI CCTAGG 1 cut(s) 1141
BlsI GCNGC 6 cut(s) 739, 958, 1179, 1263, 1324, 1384
BmcAI AGTACT 1 cut(s) 299
Bme1390I CCNGG 3 cut(s) 1257, 1258, 1319
Bme18I GGWCC 4 cut(s) 113, 215, 286, 1151
BmeT110I CYCGRG 2 cut(s) 14, 1256
BmgT120I GGNCC 4 cut(s) 113, 215, 286, 1151
BmiI GGNNCC 5 cut(s) 177, 336, 490, 921, 1025
BmrFI CCNGG 3 cut(s) 1257, 1258, 1319
BmrI ACTGGG 1 cut(s) 1029
BmsI GCATC 7 cut(s) 55, 88, 373, 423, 811, 984, 1207
BmuI ACTGGG 1 cut(s) 1029
BpuMI CCSGG 3 cut(s) 1257, 1258, 1319
BsaHI GRCGYC 1 cut(s) 131
BsaJI CCNNGG 5 cut(s) 492, 700, 1141, 1256, 1317
BsaWI WCCGGW 2 cut(s) 195, 922
Bsc4I CCNNNNNNNGG 7 cut(s) 344, 359, 712, 952, 1019, 1160, 1358
Bse118I RCCGGY 1 cut(s) 195
Bse1I ACTGG 5 cut(s) 122, 134, 1006, 1024, 1295
Bse3DI GCAATG 1 cut(s) 1269
BseDI CCNNGG 5 cut(s) 492, 700, 1141, 1256, 1317
BseGI GGATG 5 cut(s) 70, 364, 595, 826, 1222
BseLI CCNNNNNNNGG 7 cut(s) 344, 359, 712, 952, 1019, 1160, 1358
BseMI GCAATG 1 cut(s) 1269
BseMII CTCAG 1 cut(s) 344
BseNI ACTGG 5 cut(s) 122, 134, 1006, 1024, 1295
BseRI GAGGAG 1 cut(s) 731
BseXI GCAGC 5 cut(s) 749, 968, 1189, 1273, 1309
Bsh1236I CGCG 1 cut(s) 506
BshFI GGCC 3 cut(s) 705, 831, 945
BshNI GGYRCC 1 cut(s) 919
BshTI ACCGGT 1 cut(s) 195
BsiHKCI CYCGRG 2 cut(s) 14, 1256
BsiSI CCGG 5 cut(s) 196, 923, 1257, 1319, 1359
BslI CCNNNNNNNGG 7 cut(s) 344, 359, 712, 952, 1019, 1160, 1358
BsmAI GTCTC 2 cut(s) 308, 765
BsnI GGCC 3 cut(s) 705, 831, 945
BsoBI CYCGRG 2 cut(s) 14, 1256
Bsp143I GATC 4 cut(s) 175, 531, 592, 793
Bsp19I CCATGG 1 cut(s) 700
BspACI CCGC 2 cut(s) 77, 755
BspANI GGCC 3 cut(s) 705, 831, 945
BspCNI CTCAG 1 cut(s) 343
BspFNI CGCG 1 cut(s) 506
BspHI TCATGA 1 cut(s) 534
BspLI GGNNCC 5 cut(s) 177, 336, 490, 921, 1025
BspMAI CTGCAG 1 cut(s) 1384
BspPI GGATC 2 cut(s) 170, 183
BspQI GCTCTTC 1 cut(s) 857
BspT107I GGYRCC 1 cut(s) 919
BspTI CTTAAG 1 cut(s) 797
BsrDI GCAATG 1 cut(s) 1269
BsrFI RCCGGY 1 cut(s) 195
BsrI ACTGG 5 cut(s) 122, 134, 1006, 1024, 1295
BssAI RCCGGY 1 cut(s) 195
BssECI CCNNGG 5 cut(s) 492, 700, 1141, 1256, 1317
BssMI GATC 4 cut(s) 175, 531, 592, 793
BssNI GRCGYC 1 cut(s) 131
BssSI CACGAG 2 cut(s) 880, 1221
BssT1I CCWWGG 2 cut(s) 700, 1141
Bst2BI CACGAG 2 cut(s) 880, 1221
Bst4CI ACNGT 3 cut(s) 302, 907, 1028
Bst6I CTCTTC 3 cut(s) 378, 392, 857
BstACI GRCGYC 1 cut(s) 131
BstAFI CTTAAG 1 cut(s) 797
BstC8I GCNNGC 4 cut(s) 723, 858, 1007, 1136
BstDEI CTNAG 2 cut(s) 330, 614
BstDSI CCRYGG 1 cut(s) 700
BstEII GGTNACC 1 cut(s) 347
BstENI CCTNNNNNAGG 1 cut(s) 1158
BstF5I GGATG 5 cut(s) 70, 364, 595, 826, 1222
BstFNI CGCG 1 cut(s) 506
BstH2I RGCGCY 1 cut(s) 1141
BstHHI GCGC 1 cut(s) 1140
BstKTI GATC 4 cut(s) 178, 534, 595, 796
BstMAI GTCTC 2 cut(s) 308, 765
BstMBI GATC 4 cut(s) 175, 531, 592, 793
BstNSI RCATGY 1 cut(s) 1303
BstPI GGTNACC 1 cut(s) 347
BstSCI CCNGG 3 cut(s) 1255, 1256, 1317
BstSFI CTRYAG 3 cut(s) 69, 906, 1380
BstUI CGCG 1 cut(s) 506
BstV1I GCAGC 5 cut(s) 749, 968, 1189, 1273, 1309
BstX2I RGATCY 2 cut(s) 175, 793
BstYI RGATCY 2 cut(s) 175, 793
BsuRI GGCC 3 cut(s) 705, 831, 945
BtgI CCRYGG 1 cut(s) 700
BtgZI GCGATG 1 cut(s) 521
BtsCI GGATG 5 cut(s) 70, 364, 595, 826, 1222
BtsI GCAGTG 1 cut(s) 1264
BtsIMutI CAGTG 4 cut(s) 141, 239, 288, 1264
Cac8I GCNNGC 4 cut(s) 723, 858, 1007, 1136
CciI TCATGA 1 cut(s) 534
CfoI GCGC 1 cut(s) 1140
Cfr10I RCCGGY 1 cut(s) 195
Cfr13I GGNCC 4 cut(s) 113, 215, 286, 1151
Cfr9I CCCGGG 1 cut(s) 1256
CseI GACGC 1 cut(s) 139
Csp6I GTAC 3 cut(s) 119, 171, 298
CspAI ACCGGT 1 cut(s) 195
CviQI GTAC 3 cut(s) 119, 171, 298
DdeI CTNAG 2 cut(s) 330, 614
DpnI GATC 4 cut(s) 177, 533, 594, 795
DpnII GATC 4 cut(s) 175, 531, 592, 793
EaeI YGGCCR 2 cut(s) 829, 943
Eam1104I CTCTTC 3 cut(s) 378, 392, 857
EarI CTCTTC 3 cut(s) 378, 392, 857
Eco130I CCWWGG 2 cut(s) 700, 1141
Eco47I GGWCC 4 cut(s) 113, 215, 286, 1151
Eco88I CYCGRG 2 cut(s) 14, 1256
Eco91I GGTNACC 1 cut(s) 347
EcoNI CCTNNNNNAGG 1 cut(s) 1158
EcoO65I GGTNACC 1 cut(s) 347
EcoT14I CCWWGG 2 cut(s) 700, 1141
EcoT22I ATGCAT 1 cut(s) 789
ErhI CCWWGG 2 cut(s) 700, 1141
FbaI TGATCA 1 cut(s) 592
Fnu4HI GCNGC 6 cut(s) 738, 957, 1178, 1262, 1323, 1383
FokI GGATG 5 cut(s) 77, 351, 582, 833, 1229
Fsp4HI GCNGC 6 cut(s) 738, 957, 1178, 1262, 1323, 1383
FspBI CTAG 4 cut(s) 290, 371, 1142, 1326
GlaI GCGC 1 cut(s) 1139
GluI GCNGC 6 cut(s) 738, 957, 1178, 1262, 1323, 1383
HaeII RGCGCY 1 cut(s) 1141
HaeIII GGCC 3 cut(s) 705, 831, 945
HapII CCGG 5 cut(s) 196, 923, 1257, 1319, 1359
HgaI GACGC 1 cut(s) 139
HhaI GCGC 1 cut(s) 1140
Hin1I GRCGYC 1 cut(s) 131
Hin6I GCGC 1 cut(s) 1138
HinP1I GCGC 1 cut(s) 1138
HincII GTYRAC 1 cut(s) 667
HindII GTYRAC 1 cut(s) 667
HindIII AAGCTT 2 cut(s) 611, 1007
HinfI GANTC 5 cut(s) 34, 140, 278, 326, 1313
HpaII CCGG 5 cut(s) 196, 923, 1257, 1319, 1359
HphI GGTGA 4 cut(s) 359, 487, 755, 1175
Hpy166II GTNNAC 4 cut(s) 286, 667, 1151, 1312
Hpy188I TCNGA 8 cut(s) 11, 33, 103, 496, 993, 1032, 1244, 1332
Hpy188III TCNNGA 8 cut(s) 127, 332, 371, 394, 535, 1040, 1223, 1344
Hpy8I GTNNAC 4 cut(s) 286, 667, 1151, 1312
HpyAV CCTTC 7 cut(s) 228, 478, 505, 776, 1117, 1327, 1363
HpyCH4III ACNGT 3 cut(s) 302, 907, 1028
HpyCH4IV ACGT 1 cut(s) 1251
HpyCH4V TGCA 9 cut(s) 21, 43, 57, 461, 737, 787, 824, 1269, 1382
HpyF3I CTNAG 2 cut(s) 330, 614
HpySE526I ACGT 1 cut(s) 1251
Hsp92I GRCGYC 1 cut(s) 131
HspAI GCGC 1 cut(s) 1138
Ksp22I TGATCA 1 cut(s) 592
Kzo9I GATC 4 cut(s) 175, 531, 592, 793
LguI GCTCTTC 1 cut(s) 857
LmnI GCTCC 1 cut(s) 718
Lsp1109I GCAGC 5 cut(s) 749, 968, 1189, 1273, 1309
LweI GCATC 7 cut(s) 55, 88, 373, 423, 811, 984, 1207
MaeI CTAG 4 cut(s) 290, 371, 1142, 1326
MaeII ACGT 1 cut(s) 1251
MaeIII GTNAC 2 cut(s) 198, 347
MalI GATC 4 cut(s) 177, 533, 594, 795
MboI GATC 4 cut(s) 175, 531, 592, 793
MflI RGATCY 2 cut(s) 175, 793
MlsI TGGCCA 2 cut(s) 831, 945
MluCI AATT 9 cut(s) 27, 51, 148, 563, 889, 1197, 1201, 1211, 1285
MluNI TGGCCA 2 cut(s) 831, 945
MlyI GAGTC 2 cut(s) 28, 1307
MmeI TCCRAC 1 cut(s) 1267
Mox20I TGGCCA 2 cut(s) 831, 945
Mph1103I ATGCAT 1 cut(s) 789
MroXI GAANNNNTTC 1 cut(s) 930
MscI TGGCCA 2 cut(s) 831, 945
MseI TTAA 5 cut(s) 581, 798, 842, 1200, 1390
MslI CAYNNNNRTG 1 cut(s) 774
Msp20I TGGCCA 2 cut(s) 831, 945
MspCI CTTAAG 1 cut(s) 797
MspI CCGG 5 cut(s) 196, 923, 1257, 1319, 1359
MspR9I CCNGG 3 cut(s) 1257, 1258, 1319
MvnI CGCG 1 cut(s) 506
NciI CCSGG 3 cut(s) 1257, 1258, 1319
NcoI CCATGG 1 cut(s) 700
NdeII GATC 4 cut(s) 175, 531, 592, 793
NlaIV GGNNCC 5 cut(s) 177, 336, 490, 921, 1025
NmeAIII GCCGAG 1 cut(s) 766
NmuCI GTSAC 2 cut(s) 198, 347
NsiI ATGCAT 1 cut(s) 789
NspI RCATGY 1 cut(s) 1303
PagI TCATGA 1 cut(s) 534
PciSI GCTCTTC 1 cut(s) 857
PdmI GAANNNNTTC 1 cut(s) 930
PfeI GAWTC 3 cut(s) 140, 278, 326
PflFI GACNNNGTC 1 cut(s) 353
PinAI ACCGGT 1 cut(s) 195
PkrI GCNGC 6 cut(s) 739, 958, 1179, 1263, 1324, 1384
PleI GAGTC 2 cut(s) 28, 1307
PpsI GAGTC 2 cut(s) 28, 1307
PshBI ATTAAT 1 cut(s) 1200
PsiI TTATAA 1 cut(s) 267
Psp1406I AACGTT 1 cut(s) 1251
PspEI GGTNACC 1 cut(s) 347
PspN4I GGNNCC 5 cut(s) 177, 336, 490, 921, 1025
PspPI GGNCC 4 cut(s) 113, 215, 286, 1151
PstI CTGCAG 1 cut(s) 1384
PsuI RGATCY 2 cut(s) 175, 793
PsyI GACNNNGTC 1 cut(s) 353
RsaI GTAC 3 cut(s) 120, 172, 299
RsaNI GTAC 3 cut(s) 119, 171, 298
RseI CAYNNNNRTG 1 cut(s) 774
SapI GCTCTTC 1 cut(s) 857
SaqAI TTAA 5 cut(s) 581, 798, 842, 1200, 1390
SatI GCNGC 6 cut(s) 738, 957, 1178, 1262, 1323, 1383
Sau3AI GATC 4 cut(s) 175, 531, 592, 793
Sau96I GGNCC 4 cut(s) 113, 215, 286, 1151
ScaI AGTACT 1 cut(s) 299
SchI GAGTC 2 cut(s) 28, 1307
ScrFI CCNGG 3 cut(s) 1257, 1258, 1319
SfaNI GCATC 7 cut(s) 55, 88, 373, 423, 811, 984, 1207
SfcI CTRYAG 3 cut(s) 69, 906, 1380
SinI GGWCC 4 cut(s) 113, 215, 286, 1151
SmaI CCCGGG 1 cut(s) 1258
SmiMI CAYNNNNRTG 1 cut(s) 774
SmlI CTYRAG 1 cut(s) 797
SmoI CTYRAG 1 cut(s) 797
Sse9I AATT 9 cut(s) 27, 51, 148, 563, 889, 1197, 1201, 1211, 1285
SsiI CCGC 2 cut(s) 77, 755
SspMI CTAG 4 cut(s) 290, 371, 1142, 1326
StyD4I CCNGG 3 cut(s) 1255, 1256, 1317
StyI CCWWGG 2 cut(s) 700, 1141
TaaI ACNGT 3 cut(s) 302, 907, 1028
TaiI ACGT 1 cut(s) 1254
TaqI TCGA 1 cut(s) 417
TasI AATT 9 cut(s) 27, 51, 148, 563, 889, 1197, 1201, 1211, 1285
TatI WGTACW 1 cut(s) 297
TfiI GAWTC 3 cut(s) 140, 278, 326
Tru1I TTAA 5 cut(s) 581, 798, 842, 1200, 1390
Tru9I TTAA 5 cut(s) 581, 798, 842, 1200, 1390
TscAI CASTG 4 cut(s) 141, 246, 288, 1271
TseFI GTSAC 2 cut(s) 198, 347
TseI GCWGC 6 cut(s) 737, 956, 1177, 1261, 1322, 1382
Tsp45I GTSAC 2 cut(s) 198, 347
TspDTI ATGAA 9 cut(s) 175, 210, 324, 524, 551, 575, 592, 758, 1182
TspGWI ACGGA 2 cut(s) 188, 684
TspMI CCCGGG 1 cut(s) 1256
TspRI CASTG 4 cut(s) 141, 246, 288, 1271
Tth111I GACNNNGTC 1 cut(s) 353
Vha464I CTTAAG 1 cut(s) 797
VpaK11BI GGWCC 4 cut(s) 113, 215, 286, 1151
VspI ATTAAT 1 cut(s) 1200
XagI CCTNNNNNAGG 1 cut(s) 1158
XapI RAATTY 1 cut(s) 563
XbaI TCTAGA 1 cut(s) 370
XceI RCATGY 1 cut(s) 1303
XmaI CCCGGG 1 cut(s) 1256
XmaJI CCTAGG 1 cut(s) 1141
XmnI GAANNNNTTC 1 cut(s) 930
XspI CTAG 4 cut(s) 290, 371, 1142, 1326
ZrmI AGTACT 1 cut(s) 299
Zsp2I ATGCAT 1 cut(s) 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.